g.barbadense_cottongen_reftransV1_0097272, g.barbadense_cottongen_reftransV1_0097272 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_ASPFU (COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5 PE=3 SV=2) HSP 1 Score: 374.015 bits (959), Expect = 7.942e-123 Identity = 182/338 (53.85%), Postives = 238/338 (70.41%), Query Frame = -2 Query: 560 AQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDD--PISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL--AHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRS 1561 AQ++WELEN I + DP D+++ YDE +PWA DPHYFK ++ISA+AL+KM +HARSGG++EVMGLMQG + +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ + AGR+EN VGWYHSHPGYGCWLSGIDV+TQ + QQ PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP + +YQTIPL+K EDFG + QYY+L++++FKSSLD LL LWNKYWV TLS SPL DY + Q+ DL++K+ +A + + SR G P ++ QL KI RD +I E+V GL++ +K LF + + +++ Sbjct: 4 AQQSWELENTISLI---DPQRDALYRYDEETHKALSAARPWAKDPHYFKSIRISAVALIKMTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM-QQLGGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEGNEDEDYQTIPLSKAEDFGAYAHQYYSLEVSFFKSSLDTELLSQLWNKYWVATLSQSPLFTTRDYGSRQMMDLSQKVRRAARGIESSGSRGGATTP------KDQQLEKIVRDGQRIVSEEVKGLLAAEVKMKLFQGIGEGTQT 331
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=RRI1 PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 3.105e-122 Identity = 197/391 (50.38%), Postives = 252/391 (64.45%), Query Frame = -2 Query: 530 WELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTD--GDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYK---PPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL-----------------AHSRIG--------------------PLGPPR------KKLQEESQLAKITR---DSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPM 1549 +EL N I+ + + + DSIF YD AQ +PW DPH+F++V+ISA+AL+KMV+HARSGG E+MGLMQGK D + VMD+FALPVEGTETRVNAQ +AYEYMV Y +K+ GRLENVVGWYHSHPGYGCWLSGIDV+TQ NQQFQ+PF+A+VIDP RT+S+GKV+IGAFRT+PEGY SEYQ+IPL+KIEDFGVH +YY L++ +FKSSLD LLDLLWNKYW NTLS SPL+ N Y QI DLA+KL Q + A RIG P G + K+ ++ S+++ I+R D+AK+ E HGL++ +K LF++ ++ + S P P+ Sbjct: 17 FELNNAIIPLSST--TLDSIFAYDNEAQRAILHAQPWKTDPHFFQKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFRTFPEGYTSSSSIGGGDSEYQSIPLSKIEDFGVHANEYYPLEVEHFKSSLDGKLLDLLWNKYWQNTLSQSPLVSNRAYTTSQIRDLADKLAQTNAAVLNRNSVSSAPFTTTAGAASVRIGAGKDVAAETEQNSGGSAKDTPAGTAQDAAGLVKEFEQRSKMSAISRASNDAAKLASEANHGLLASQLKHTLFHN-HTATPTPASASAPTPI 404
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rri1 PE=1 SV=2) HSP 1 Score: 370.163 bits (949), Expect = 2.599e-121 Identity = 180/333 (54.05%), Postives = 229/333 (68.77%), Query Frame = -2 Query: 578 AQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPIS--EYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQ---EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1561 AQ +WELEN + + DP DS++ YDE +PW DPHYFK V+ISA+ALLKMV+HARSGG++EVMGLMQG + +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ ++AGR+EN VGWYHSHPGYGCWLSGIDVSTQ + QQ PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP + EYQT+PLNK EDFG H YY+L+++ FKS+LD +L LLWNKYWV TLS SPL DY + Q+ DL++K + + + PPR + QL ++ +D +I E+V GL++ +K LF + Sbjct: 4 AQLSWELENAVTLI---DPQRDSLYRYDEETHKYLSDTRPWTKDPHYFKSVRISAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAEDFGAHASHYYSLEVSLFKSALDTEILSLLWNKYWVATLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESN------PPRGGAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQLFQGI 326
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 1.270e-119 Identity = 176/334 (52.69%), Postives = 234/334 (70.06%), Query Frame = -2 Query: 578 AIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISE-YQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGP---LGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1567 A A K WEL+NN+ V DP D+++ +D AQ +E+PW DP +FK V+ISA AL+KM +HARSGG +EVMGLMQG T GD IV DAF LPVEGTETRVNAQ +A EY+V+Y + GR ENVVGWYHSHPGYGCWLSGIDV T+ + QQFQ+PFLAVVIDP RT+++GKV+IGAFRTYP YKP S+ +Q +PL K +FG H +YY+L++++FKSSLD HLL+LLW+KYWV TLS +PL+ N DY Q+ DL+ K+++A + +R G +G K + + K+ +++ I ++ GL++ +K LFN + Sbjct: 3 ASALKAWELDNNVQLV---DPKRDALYNFDADAQKAINKEQPWKQDPSHFKHVRISATALIKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFRTYPADYKPSGGVTSDGFQAVPLAKAAEFGAHASRYYSLEVSHFKSSLDSHLLELLWHKYWVQTLSQNPLITNRDYGNKQLLDLSSKIKEATTGITRNRAGQGMMMGMSTKS--SDKAVDKLAKEANLIASKERSGLIANQVKASLFNDL 331
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNJ (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RRI1 PE=3 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 1.363e-117 Identity = 184/355 (51.83%), Postives = 240/355 (67.61%), Query Frame = -2 Query: 581 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHS----RIGPLGPPR----------KKL-----------QEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNS 1570 ++ A+KT+E+ NN+ V DPS+ +IF Y + E PW DPHYF VKISA+AL+KMV HARSGG E+MG+M GK +MD ALPV+GTETRVNA +A EYMV++ N +AG+ E + GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP S+YQ+IP++KIEDFGVH YY L + +KS LD +LDLLWNKYWV TLSS+ L+ N +Y Q+ DL KL A +++S ++ P P KKL +EE+ L K+T++S++IT E +G++SQ++K+ LFN+ Sbjct: 2 ASTARKTFEINNNVQVV---DPSA-AIFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLDEKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQPTTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLFNT 352
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNB (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 1.363e-117 Identity = 184/355 (51.83%), Postives = 240/355 (67.61%), Query Frame = -2 Query: 581 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHS----RIGPLGPPR----------KKL-----------QEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNS 1570 ++ A+KT+E+ NN+ V DPS+ +IF Y + E PW DPHYF VKISA+AL+KMV HARSGG E+MG+M GK +MD ALPV+GTETRVNA +A EYMV++ N +AG+ E + GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP S+YQ+IP++KIEDFGVH YY L + +KS LD +LDLLWNKYWV TLSS+ L+ N +Y Q+ DL KL A +++S ++ P P KKL +EE+ L K+T++S++IT E +G++SQ++K+ LFN+ Sbjct: 2 ASTARKTFEINNNVQVV---DPSA-AIFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLDEKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQPTTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLFNT 352
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_NEUCR (COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-5 PE=1 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 3.167e-112 Identity = 167/329 (50.76%), Postives = 220/329 (66.87%), Query Frame = -2 Query: 536 DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKP---PDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAH-SRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPE 1510 D D+++ YD A +PW ND YFK V+IS++A++KMV+HARSGG +EVMG+MQG +G +++ DA+ LPVEGTETRVNAQ +A EYMV+Y + ++ RLENV+GWYHSHPGYGCWLSGIDV TQ L QQF EPF+AVVIDP RTVS KVEIGAFRT PEG KP + + Q++PLNK+EDFG H +YYALD+ +FKS+LD LL+ LWNKYWV TL+ +PLL N DY + Q+ DL ++ +A L S G GP + + + K+ + +I ++ GLM+ +K +F R Q + PE Sbjct: 11 DVQRDALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSGGNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTIPEGIKPFAATNTTTGDGQSVPLNKVEDFGAHSHRYYALDVEHFKSTLDSKLLETLWNKYWVQTLAQNPLLTNRDYTSSQMVDLGSRISKASKSLEMLSTTGQRGPKSDAVDQ--NIEKLLSEVKQIAAKERSGLMAAEVKGKVFGC---GCRGQAEGVQPE 334
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RRI1 PE=3 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 3.359e-104 Identity = 169/349 (48.42%), Postives = 220/349 (63.04%), Query Frame = -2 Query: 575 TWELENNILTVE-TPDPS--SDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEY--QTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLG------------PPRKKLQEESQ------LAKITRDSAKITVEQVHGLMSQVIKDILFNSVR 1552 T+++EN+I+ V+ TP D ++ YD+ Q PW DP YF+ V +S++AL+KM +HARSGG IEVMG+M GK + +VMD + LPVEGTETRVNAQ + E+MV+Y Q K GR EN+VGWYHSHPGYGCWLSGIDV TQ NQQFQEPFLAVV+DP RT+SAGKVEIGAFRTYP+ YKPP + Q++PL+K +D+G H ++YY LD+++FKSSLD +LL LLWNK W TLS S + N DY + + DL+EK Q L G P L S + + +D +I +++ GLMS I+ LF + Sbjct: 6 TFQVENDIVDVDSTPQQGFDRDDLYKYDDVEQKAILAAHPWRTDPSYFRNVLVSSIALVKMAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDYKPPKKATKQNQDQSVPLSKAKDYGAHSERYYELDVSFFKSSLDENLLQLLWNKNWAATLSQSTIQLNHDYTSKLMLDLSEKNAQLAIGLGEKTPQSQGRGFREAMSKADNEPHTNLLNYSTKGQWEAVNRSVKDGVQIGSDELQGLMSLEIQRRLFGRAK 354
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_DEBHA (COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RRI1 PE=3 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 2.797e-89 Identity = 141/269 (52.42%), Postives = 184/269 (68.40%), Query Frame = -2 Query: 719 DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDD--PISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG--DYVAGQISDLAEKLEQAE-NQLAHSRI 1510 D +D ++ + + +PW ++ YFK+ IS+LAL KM VHA+SGG IEVMG+M GK ++IIVMD + LPVEGTETRVNAQA+ YEYMV Y + +KQ GR EN+VGWYHSHPGYGCWLSGIDV+TQ LNQ FQ+P+LA+VIDP +T GKVEIGAFRT+P+ YK PD P + + +P +K +DFGVH +YY+LDI FKS+LD +L+++ NK W+ L S N + + L KL++ E NQL I Sbjct: 30 DKHADYESFFSINSDESIMKARPWKSNAKYFKKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFRTFPDNYKSPDSAAPTNNTRGVPPSKQKDFGVHSDKYYSLDIQIFKSNLDTEILNIISNKSWIGKLIKSVNTANHQEQNMIENVFKLINKLQKKEVNQLNRFEI 298
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_SCHPO (COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 7.960e-77 Identity = 116/243 (47.74%), Postives = 163/243 (67.08%), Query Frame = -2 Query: 788 DSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG------YKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYV 1498 +++F +DE + +E PW +DP +F+ VKISA+ALLKM+ H G +EVMG +QGK +G ++I++D+FALPVEGTETRVNA +A EY V Y K R ENV+GWYHSHP YGCWLSG+DV TQ NQ++Q+PF+AVV+DP R++ + V IGAFRTYP G K P ++ +P +KIED G H + YY+L ITYF S + + + L N+ W +++ +L N +++ Sbjct: 6 ENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHPSVLFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNNEFL 248
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: K4D6N3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=LOC543616 PE=4 SV=1) HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0 Identity = 311/357 (87.11%), Postives = 335/357 (93.84%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 +A+AQ+TWELENNI+T + P + +SD+IF+YD+AAQ KFQ+EKPW +DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDV+TQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR G L P++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV +S +SQ + S PEPM+ET Sbjct: 11 AAMAQQTWELENNIVTTDAPSGSAPENSASDAIFHYDDAAQTKFQREKPWTSDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVTTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRFGHLVAAPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVCKSGKSQTEPSDPEPMVET 367
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: B9N696_POPTR (COP9 complex family protein OS=Populus trichocarpa GN=POPTR_0006s29000g PE=4 SV=1) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 314/360 (87.22%), Postives = 336/360 (93.33%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETPDPSSDSI----------FYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 S+IA+KTWELENNI+ ++T P++ FY+DEAAQAKFQ+EKPW+NDP+YF+RVKISALALLKMVVHARSGGTIEVMGLMQGKTDGD+IIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENV+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLE AENQLAHSR+GPL P++K EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV QS+RSQ + SGPEPM+ET Sbjct: 7 SSIAKKTWELENNIIPIDTATPTTTDTSSSSSSSDAIFYFDEAAQAKFQKEKPWSNDPNYFRRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDSIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMTPQRKKDEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQSNRSQTEPSGPEPMVET 366
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: W9S9C6_9ROSA (COP9 signalosome complex subunit 5b OS=Morus notabilis GN=L484_002292 PE=4 SV=1) HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0 Identity = 325/361 (90.03%), Postives = 339/361 (93.91%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETPDP----------SSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 S IAQ+TWELENNI+ +ETP P SSD++FYYDEAAQAKFQQEKPW+NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+P+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLD HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL PP++K EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+RS + SGP+PMIE+ Sbjct: 8 SQIAQQTWELENNIIPMETPTPPATAKSSGGDSSDAVFYYDEAAQAKFQQEKPWSNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPPQRKKDEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNRSHAEPSGPDPMIES 368
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: D6CIB3_SOLLC (CSN5 protein OS=Solanum lycopersicum GN=csn5 PE=2 SV=1) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 309/357 (86.55%), Postives = 333/357 (93.28%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 +A+AQ+TWELENNI+T + P + +SD+IF+YD+AAQ KFQ+EKPW +DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDV+TQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ EN L+HSR G L P++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV +S +SQ + S PEPM+ET Sbjct: 11 AAMAQQTWELENNIVTTDAPSGSAPENSASDAIFHYDDAAQTKFQREKPWTSDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVTTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQGENHLSHSRFGHLVAAPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVCKSGKSQTEPSDPEPMVET 367
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: Q9FR56_SOLLC (JAB OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0 Identity = 308/357 (86.27%), Postives = 333/357 (93.28%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 +A+AQ+TWELENNI+T + P + +SD+IF+YD+AAQ KFQ+EKPW +DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDV+TQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLL NGDYVAGQISDLAEK+EQAEN L+HSR G L P++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV +S +SQ + S PEPM+ET Sbjct: 11 AAMAQQTWELENNIVTTDAPSGSAPENSASDAIFHYDDAAQTKFQREKPWTSDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVTTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLENGDYVAGQISDLAEKMEQAENHLSHSRFGHLVAAPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVCKSGKSQTEPSDPEPMVET 367 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097272 ID=g.barbadense_cottongen_reftransV1_0097272; Name=g.barbadense_cottongen_reftransV1_0097272; organism=Gossypium barbadense; type=contig; length=1847bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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