g.barbadense_cottongen_reftransV1_0097272, g.barbadense_cottongen_reftransV1_0097272 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097272
Unique Name	g.barbadense_cottongen_reftransV1_0097272
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	1847

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
At05	chromosome	g.barbadense_cottongen_reftransV1_0097272:1..1832 . At05:3897802..3900469 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_ASPFU (COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5 PE=3 SV=2)

HSP 1 Score: 374.015 bits (959), Expect = 7.942e-123
Identity = 182/338 (53.85%), Postives = 238/338 (70.41%), Query Frame = -2

Query:  560 AQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDD--PISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL--AHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRS 1561
            AQ++WELEN I  +   DP  D+++ YDE         +PWA DPHYFK ++ISA+AL+KM +HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ + AGR+EN VGWYHSHPGYGCWLSGIDV+TQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP +     +YQTIPL+K EDFG +  QYY+L++++FKSSLD  LL  LWNKYWV TLS SPL    DY + Q+ DL++K+ +A   +  + SR G   P      ++ QL KI RD  +I  E+V GL++  +K  LF  + + +++
Sbjct:    4 AQQSWELENTISLI---DPQRDALYRYDEETHKALSAARPWAKDPHYFKSIRISAVALIKMTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM-QQLGGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEGNEDEDYQTIPLSKAEDFGAYAHQYYSLEVSFFKSSLDTELLSQLWNKYWVATLSQSPLFTTRDYGSRQMMDLSQKVRRAARGIESSGSRGGATTP------KDQQLEKIVRDGQRIVSEEVKGLLAAEVKMKLFQGIGEGTQT 331

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=RRI1 PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 3.105e-122
Identity = 197/391 (50.38%), Postives = 252/391 (64.45%), Query Frame = -2

Query:  530 WELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTD--GDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYK---PPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL-----------------AHSRIG--------------------PLGPPR------KKLQEESQLAKITR---DSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPM 1549
            +EL N I+ + +   + DSIF YD  AQ      +PW  DPH+F++V+ISA+AL+KMV+HARSGG  E+MGLMQGK D     + VMD+FALPVEGTETRVNAQ +AYEYMV Y   +K+ GRLENVVGWYHSHPGYGCWLSGIDV+TQ  NQQFQ+PF+A+VIDP RT+S+GKV+IGAFRT+PEGY          SEYQ+IPL+KIEDFGVH  +YY L++ +FKSSLD  LLDLLWNKYW NTLS SPL+ N  Y   QI DLA+KL Q    +                 A  RIG                    P G  +      K+ ++ S+++ I+R   D+AK+  E  HGL++  +K  LF++   ++ +    S P P+
Sbjct:   17 FELNNAIIPLSST--TLDSIFAYDNEAQRAILHAQPWKTDPHFFQKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFRTFPEGYTSSSSIGGGDSEYQSIPLSKIEDFGVHANEYYPLEVEHFKSSLDGKLLDLLWNKYWQNTLSQSPLVSNRAYTTSQIRDLADKLAQTNAAVLNRNSVSSAPFTTTAGAASVRIGAGKDVAAETEQNSGGSAKDTPAGTAQDAAGLVKEFEQRSKMSAISRASNDAAKLASEANHGLLASQLKHTLFHN-HTATPTPASASAPTPI 404

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rri1 PE=1 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 2.599e-121
Identity = 180/333 (54.05%), Postives = 229/333 (68.77%), Query Frame = -2

Query:  578 AQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPIS--EYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQ---EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1561
            AQ +WELEN +  +   DP  DS++ YDE         +PW  DPHYFK V+ISA+ALLKMV+HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ ++AGR+EN VGWYHSHPGYGCWLSGIDVSTQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP +     EYQT+PLNK EDFG H   YY+L+++ FKS+LD  +L LLWNKYWV TLS SPL    DY + Q+ DL++K  +    +  +      PPR        + QL ++ +D  +I  E+V GL++  +K  LF  +
Sbjct:    4 AQLSWELENAVTLI---DPQRDSLYRYDEETHKYLSDTRPWTKDPHYFKSVRISAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAEDFGAHASHYYSLEVSLFKSALDTEILSLLWNKYWVATLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESN------PPRGGAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQLFQGI 326

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.270e-119
Identity = 176/334 (52.69%), Postives = 234/334 (70.06%), Query Frame = -2

Query:  578 AIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISE-YQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGP---LGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1567
            A A K WEL+NN+  V   DP  D+++ +D  AQ    +E+PW  DP +FK V+ISA AL+KM +HARSGG +EVMGLMQG T GD  IV DAF LPVEGTETRVNAQ +A EY+V+Y    +  GR ENVVGWYHSHPGYGCWLSGIDV T+ + QQFQ+PFLAVVIDP RT+++GKV+IGAFRTYP  YKP     S+ +Q +PL K  +FG H  +YY+L++++FKSSLD HLL+LLW+KYWV TLS +PL+ N DY   Q+ DL+ K+++A   +  +R G    +G   K    +  + K+ +++  I  ++  GL++  +K  LFN +
Sbjct:    3 ASALKAWELDNNVQLV---DPKRDALYNFDADAQKAINKEQPWKQDPSHFKHVRISATALIKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFRTYPADYKPSGGVTSDGFQAVPLAKAAEFGAHASRYYSLEVSHFKSSLDSHLLELLWHKYWVQTLSQNPLITNRDYGNKQLLDLSSKIKEATTGITRNRAGQGMMMGMSTKS--SDKAVDKLAKEANLIASKERSGLIANQVKASLFNDL 331

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNJ (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RRI1 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.363e-117
Identity = 184/355 (51.83%), Postives = 240/355 (67.61%), Query Frame = -2

Query:  581 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHS----RIGPLGPPR----------KKL-----------QEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNS 1570
            ++ A+KT+E+ NN+  V   DPS+ +IF Y    +     E PW  DPHYF  VKISA+AL+KMV HARSGG  E+MG+M GK       +MD  ALPV+GTETRVNA  +A EYMV++   N +AG+ E + GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP    S+YQ+IP++KIEDFGVH   YY L +  +KS LD  +LDLLWNKYWV TLSS+ L+ N +Y   Q+ DL  KL  A   +++S    ++ P  P            KKL           +EE+ L K+T++S++IT E  +G++SQ++K+ LFN+
Sbjct:    2 ASTARKTFEINNNVQVV---DPSA-AIFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLDEKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQPTTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLFNT 352

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNB (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.363e-117
Identity = 184/355 (51.83%), Postives = 240/355 (67.61%), Query Frame = -2

Query:  581 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHS----RIGPLGPPR----------KKL-----------QEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNS 1570
            ++ A+KT+E+ NN+  V   DPS+ +IF Y    +     E PW  DPHYF  VKISA+AL+KMV HARSGG  E+MG+M GK       +MD  ALPV+GTETRVNA  +A EYMV++   N +AG+ E + GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP    S+YQ+IP++KIEDFGVH   YY L +  +KS LD  +LDLLWNKYWV TLSS+ L+ N +Y   Q+ DL  KL  A   +++S    ++ P  P            KKL           +EE+ L K+T++S++IT E  +G++SQ++K+ LFN+
Sbjct:    2 ASTARKTFEINNNVQVV---DPSA-AIFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLDEKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQPTTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLFNT 352

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_NEUCR (COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-5 PE=1 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 3.167e-112
Identity = 167/329 (50.76%), Postives = 220/329 (66.87%), Query Frame = -2

Query:  536 DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKP---PDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAH-SRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPE 1510
            D   D+++ YD  A       +PW ND  YFK V+IS++A++KMV+HARSGG +EVMG+MQG  +G  +++ DA+ LPVEGTETRVNAQ +A EYMV+Y +  ++  RLENV+GWYHSHPGYGCWLSGIDV TQ L QQF EPF+AVVIDP RTVS  KVEIGAFRT PEG KP    +    + Q++PLNK+EDFG H  +YYALD+ +FKS+LD  LL+ LWNKYWV TL+ +PLL N DY + Q+ DL  ++ +A   L   S  G  GP    + +   + K+  +  +I  ++  GLM+  +K  +F       R Q +   PE
Sbjct:   11 DVQRDALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSGGNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTIPEGIKPFAATNTTTGDGQSVPLNKVEDFGAHSHRYYALDVEHFKSTLDSKLLETLWNKYWVQTLAQNPLLTNRDYTSSQMVDLGSRISKASKSLEMLSTTGQRGPKSDAVDQ--NIEKLLSEVKQIAAKERSGLMAAEVKGKVFGC---GCRGQAEGVQPE 334

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RRI1 PE=3 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 3.359e-104
Identity = 169/349 (48.42%), Postives = 220/349 (63.04%), Query Frame = -2

Query:  575 TWELENNILTVE-TPDPS--SDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEY--QTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLG------------PPRKKLQEESQ------LAKITRDSAKITVEQVHGLMSQVIKDILFNSVR 1552
            T+++EN+I+ V+ TP      D ++ YD+  Q       PW  DP YF+ V +S++AL+KM +HARSGG IEVMG+M GK   +  +VMD + LPVEGTETRVNAQ +  E+MV+Y Q  K  GR EN+VGWYHSHPGYGCWLSGIDV TQ  NQQFQEPFLAVV+DP RT+SAGKVEIGAFRTYP+ YKPP     +   Q++PL+K +D+G H ++YY LD+++FKSSLD +LL LLWNK W  TLS S +  N DY +  + DL+EK  Q    L        G             P   L   S       + +  +D  +I  +++ GLMS  I+  LF   +
Sbjct:    6 TFQVENDIVDVDSTPQQGFDRDDLYKYDDVEQKAILAAHPWRTDPSYFRNVLVSSIALVKMAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDYKPPKKATKQNQDQSVPLSKAKDYGAHSERYYELDVSFFKSSLDENLLQLLWNKNWAATLSQSTIQLNHDYTSKLMLDLSEKNAQLAIGLGEKTPQSQGRGFREAMSKADNEPHTNLLNYSTKGQWEAVNRSVKDGVQIGSDELQGLMSLEIQRRLFGRAK 354

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_DEBHA (COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RRI1 PE=3 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 2.797e-89
Identity = 141/269 (52.42%), Postives = 184/269 (68.40%), Query Frame = -2

Query:  719 DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDD--PISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG--DYVAGQISDLAEKLEQAE-NQLAHSRI 1510
            D  +D   ++   +     + +PW ++  YFK+  IS+LAL KM VHA+SGG IEVMG+M GK   ++IIVMD + LPVEGTETRVNAQA+ YEYMV Y + +KQ GR EN+VGWYHSHPGYGCWLSGIDV+TQ LNQ FQ+P+LA+VIDP +T   GKVEIGAFRT+P+ YK PD   P +  + +P +K +DFGVH  +YY+LDI  FKS+LD  +L+++ NK W+  L  S    N     +   +  L  KL++ E NQL    I
Sbjct:   30 DKHADYESFFSINSDESIMKARPWKSNAKYFKKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFRTFPDNYKSPDSAAPTNNTRGVPPSKQKDFGVHSDKYYSLDIQIFKSNLDTEILNIISNKSWIGKLIKSVNTANHQEQNMIENVFKLINKLQKKEVNQLNRFEI 298

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_SCHPO (COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 7.960e-77
Identity = 116/243 (47.74%), Postives = 163/243 (67.08%), Query Frame = -2

Query:  788 DSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG------YKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYV 1498
            +++F +DE  +    +E PW +DP +F+ VKISA+ALLKM+ H   G  +EVMG +QGK +G ++I++D+FALPVEGTETRVNA  +A EY V Y    K   R ENV+GWYHSHP YGCWLSG+DV TQ  NQ++Q+PF+AVV+DP R++ +  V IGAFRTYP G       K    P   ++ +P +KIED G H + YY+L ITYF S  +  + + L N+ W  +++   +L N +++
Sbjct:    6 ENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHPSVLFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNNEFL 248

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2TKS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = -2

Query:  521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 352

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0B0P622_GOSAR (COP9 signalosome complex subunit 5b-like protein OS=Gossypium arboreum GN=F383_08736 PE=4 SV=1)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = -2

Query:  521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 352

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2QAH3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1)

HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = -2

Query:  521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK  EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK--EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 350

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2UHF5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1)

HSP 1 Score: 717.998 bits (1852), Expect = 0.000e+0
Identity = 346/352 (98.30%), Postives = 346/352 (98.30%), Query Frame = -2

Query:  521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK      LAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK------LAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 346

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A061GQ34_THECC (COP9-signalosome 5B OS=Theobroma cacao GN=TCM_036813 PE=4 SV=1)

HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0
Identity = 337/351 (96.01%), Postives = 343/351 (97.72%), Query Frame = -2

Query:  524 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIE 1576
            MDSAIAQK WELENNILTV+TPDPSSDSIFYYD  AQ KFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG+GDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK +EESQLAKITRDSAKITVEQV GLMSQVIKDILFNSVRQS+R +ND SGPEPM+E
Sbjct:    1 MDSAIAQKRWELENNILTVDTPDPSSDSIFYYDGPAQTKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGSGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK-EEESQLAKITRDSAKITVEQVDGLMSQVIKDILFNSVRQSNRCRNDHSGPEPMVE 350

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: B9SPP1_RICCO (Jun activation domain binding protein, putative OS=Ricinus communis GN=RCOM_0204710 PE=4 SV=1)

HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0
Identity = 327/358 (91.34%), Postives = 341/358 (95.25%), Query Frame = -2

Query:  521 SAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            S IAQKTWELENNI+TV+TP       DPSSD+IFYYDE AQ KFQQ++PW+NDPHYF+RVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL  PP++K +EESQL KITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRS+ + SGPEPM+ET
Sbjct:   10 SVIAQKTWELENNIITVDTPPTTNSTADPSSDAIFYYDEPAQVKFQQDRPWSNDPHYFRRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPPQRKKEEESQLTKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSRAEGSGPEPMVET 367

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: F6I0N0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04360 PE=4 SV=1)

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 324/351 (92.31%), Postives = 338/351 (96.30%), Query Frame = -2

Query:  521 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            ++IAQKTWELENNI +++ P   SDSIF+YD+AAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGG IEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL  P ++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+RS+ + SGPEPMIET
Sbjct:   10 ASIAQKTWELENNIASMDAPSADSDSIFFYDDAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGNIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNRSRTEPSGPEPMIET 360

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2TEX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1)

HSP 1 Score: 679.863 bits (1753), Expect = 0.000e+0
Identity = 327/334 (97.90%), Postives = 328/334 (98.20%), Query Frame = -2

Query:  575 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVR 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQV   +LF   R
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVT--LLFQIFR 332

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A067KNQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07015 PE=4 SV=1)

HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0
Identity = 324/356 (91.01%), Postives = 338/356 (94.94%), Query Frame = -2

Query:  521 IAQKTWELENNILTVET-------PDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1564
            IAQKTWELENNI+TV+T        D SSD+IFYYDE AQAKFQQ+KPWANDPHYF+RVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL  P ++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVR SSRS+ + SGPEPM+E+
Sbjct:   11 IAQKTWELENNIITVDTSPTTNSTADASSDAIFYYDETAQAKFQQDKPWANDPHYFRRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRPSSRSRTEGSGPEPMVES 366

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A067FIQ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018085mg PE=4 SV=1)

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 322/361 (89.20%), Postives = 339/361 (93.91%), Query Frame = -2

Query:  521 MDSAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL--GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDS+IAQKTWELENNI+++ETP         +SD+IF+YDE AQ KFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+PISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR GPL   PPR+K QE+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+++  + S PEPMIE+
Sbjct:    1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 361

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
CSN5_ASPFU	7.942e-123	53.85	COP9 signalosome complex subunit 5 OS=Neosartorya ...	[more]
CSN5_USTMA	3.105e-122	50.38	COP9 signalosome complex subunit 5 OS=Ustilago may...	[more]
CSN5_EMENI	2.599e-121	54.05	COP9 signalosome complex subunit 5 OS=Emericella n...	[more]
CSN5_GIBZE	1.270e-119	52.69	COP9 signalosome complex subunit 5 OS=Gibberella z...	[more]
CSN5_CRYNJ	1.363e-117	51.83	COP9 signalosome complex subunit 5 OS=Cryptococcus...	[more]
CSN5_CRYNB	1.363e-117	51.83	COP9 signalosome complex subunit 5 OS=Cryptococcus...	[more]
CSN5_NEUCR	3.167e-112	50.76	COP9 signalosome complex subunit 5 OS=Neurospora c...	[more]
CSN5_YARLI	3.359e-104	48.42	COP9 signalosome complex subunit 5 OS=Yarrowia lip...	[more]
CSN5_DEBHA	2.797e-89	52.42	COP9 signalosome complex subunit 5 OS=Debaryomyces...	[more]
CSN5_SCHPO	7.960e-77	47.74	COP9 signalosome complex subunit 5 OS=Schizosaccha...	[more]

Pages

BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2TKS2_GOSRA	0.000e+0	100.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0P622_GOSAR	0.000e+0	100.00	COP9 signalosome complex subunit 5b-like protein O...	[more]
A0A0D2QAH3_GOSRA	0.000e+0	99.43	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2UHF5_GOSRA	0.000e+0	98.30	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GQ34_THECC	0.000e+0	96.01	COP9-signalosome 5B OS=Theobroma cacao GN=TCM_0368...	[more]
B9SPP1_RICCO	0.000e+0	91.34	Jun activation domain binding protein, putative OS...	[more]
F6I0N0_VITVI	0.000e+0	92.31	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A0D2TEX3_GOSRA	0.000e+0	97.90	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A067KNQ1_JATCU	0.000e+0	91.01	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A067FIQ9_CITSI	0.000e+0	89.20	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 267..287
None	No IPR available	GENE3D	3.40.140.10		coord: 55..187 e-value: 5.9E-9 score: 35.2
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 7..352
None	No IPR available	PANTHER	PTHR10410:SF6	COP9 SIGNALOSOME COMPLEX SUBUNIT 5	coord: 7..352
None	No IPR available	SUPERFAMILY	102712	JAB1/MPN domain	coord: 55..192
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 55..192 e-value: 4.6E-47 score: 172.3
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 53..164 e-value: 2.4E-34 score: 117.7

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097272 ID=g.barbadense_cottongen_reftransV1_0097272; Name=g.barbadense_cottongen_reftransV1_0097272; organism=Gossypium barbadense; type=contig; length=1847bp
GGAGAAAGATATAACTGCAAACTTGGGTTGGGCCCAACTCAACAATAGTT
TAGTAATATGTTGTAGACTTCAGTTGTTGATTATACGACACAAAGGCCTA
GTTCACCTGAGTCCAATGGACATTTTTTTTCCTTTTGGTGTTCTTCATTT
CACTGCAAGTATTCTCAACTAGTACCCCTTCTAATTTTGTAAAACTGCCA
GACAGGAATCAAATTAAGGAAATTTTATCACTCCACTCCATAACCAGCTT
ACATAGGAAAATTGAAATTAACAATTTTAAAATACTGTGATTTGATTCCA
TGCAAATATTTCTTCAACAACAATGCATAAACTAAGAATTATGCAAAAAG
CTTAGTTCAAAACAAATTAAGACCCCTTCCCAACAGGATAGGCTTACATC
AGTAGTGCAAGGAAGGGTACAAAACTATCCAGCCTGGAATCCAATATATA
TTTCCTTCTTGTAAAAAACTGGTCTCTCACGCTCAAGGTAACCATTTCAT
CTGGCAGGATGTTAGAATTAGGTTTCAATCATAGGCTCAGGACCAGACTG
ATCGTTCTGGGACCTACTCGACTGTCGTACAGAGTTGAAAAGAATGTCTT
TGATGACCTGTGACATTAAACCATGGACTTGCTCCACAGTTATCTTTGCA
CTATCTCTAGTAATCTTAGCAAGCTGAGATTCTTCCTGCAACTTCTTTCG
AGGGGGTCCTAGTGGGCCAATGCGAGAGTGAGCCAATTGGTTCTCTGCTT
GCTCCAGCTTTTCAGCTAAATCTGAAATTTGTCCTGCAACATAATCTCCA
TTACCCAAGAGAGGTGAAGAAGAAAGGGTGTTTACCCAGTACTTATTCCA
TAACAGATCCAGGAGGTGACAATCAAGTGAGGATTTGAAATAAGTGATGT
CCAATGCATAATACTGTTTACAATGCACACCAAAGTCTTCAATCTTATTC
AGAGGAATGGTCTGATATTCAGAGATAGGGTCATCAGGAGGCTTATATCC
TTCAGGGTATGTCCTGAAAGCTCCAATCTCAACTTTTCCAGCGGAAACAG
TCCTTGTTGGGTCAATTACAACCGCCAGGAAGGGCTCCTGGAACTGCTGG
TTAAGCATTTGGGTTGAAACATCAATACCGGACAGCCAGCATCCATACCC
GGGATGTGAATGGTACCATCCAACAACATTTTCCAATCGCCCAGCCTGCT
TGTTGGTCTGGGAATAATCGACCATATACTCATAGGCATCCGCCTGAGCG
TTAACCCTAGTCTCAGTGCCTTCAACAGGCAAAGCAAAGGCGTCCATGAC
AATGATAGCATCGCCGTCAGTCTTGCCTTGCATCAGCCCCATCACCTCTA
TGGTACCACCAGATCGGGCGTGGACAACCATCTTAAGAAGAGCGAGCGCA
GAGATCTTAACGCGCTTGAAGTAGTGAGGATCATTGGCCCAAGGCTTCTC
TTGCTGGAACTTGGCTTGAGCCGCCTCGTCGTAGTAGAATATAGAATCCG
ATGAAGGGTCAGGTGTCTCGACGGTAAGTATATTGTTTTCTAATTCCCAT
GTTTTCTGAGCTATGGCAGAATCCATTCTTGTTCTTCAAATTCTCTCTAA
CTGAAGCACCCCAGGCCTAGGTTTTAATTTTATAGATATCAATTATCAAG
CACCGAGAGGAGAAGAGTGGGGAGAGAGGGATGGATTGAAAAAACCATCG
CCATTCGCCACCCTCCCCTAGGATTGAGGCCCATTACGACACTGTTCGGC
AGTTATTGGGCTTGGCCTTTAATTCTGGCTCCACAATACTGGTTTGGTGG
CTCACTGATTATATAATTTCCTTTTAATTATCATGCATGACATAGCA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000555	JAMM/MPN+_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.barbadense_cottongen_reftransV1_0097272, g.barbadense_cottongen_reftransV1_0097272 (contig) Gossypium barbadense

Pages

Pages