g.barbadense_cottongen_reftransV1_0097272, g.barbadense_cottongen_reftransV1_0097272 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097272
Unique Nameg.barbadense_cottongen_reftransV1_0097272
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1847
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At05chromosomeg.barbadense_cottongen_reftransV1_0097272:1..1832 .
At05:3897802..3900469 +
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 299/352 (84.94%), Postives = 326/352 (92.61%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPP--RKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            SAIA+KTWELENNIL VE  D +SDSIF+YD+A+QAK QQEKPWA+DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG+K  DD +SEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLD HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QLA+SR G + P   +++ ++E QLAKITRDSAKITVEQVHGLMSQVIKDILFNS RQS +S +D S PEPMI +
Sbjct:    6 SAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1)

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 297/351 (84.62%), Postives = 321/351 (91.45%), Query Frame = -2 
Query:  527 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPP--RKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS-SRSQNDQSGPEPMI 1570
            S IA+KTWELEN+ILTV++PD +SD+IFYYD+ +Q +FQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLENVVGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTRTVSAGKVEIGAFRTY +GYKPPD+P+SEYQTIPLNKIEDFGVHCKQYY+LD+TYFKSSLD HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+ L  SR G + P    KK ++ESQL KITRDSAKITVEQVHGLMSQVIKD LFNS+RQS ++S  D S P+PMI
Sbjct:    6 STIARKTWELENSILTVDSPDSTSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLHKKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 4.493e-163
Identity = 223/340 (65.59%), Postives = 276/340 (81.18%), Query Frame = -2 
Query:  563 TRMDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSR 1582
            ++  +A A KT+ELENNI T++      D +F YD     +F Q KPW+ DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVSAGKVEIGAFRTYP+GYKPP++  SEYQ+IPL+KIEDFGVHCKQYY+L+ITYFKSSLD  LLD LWNKYWVNTLSSSP+  N DY+ GQI+DL+EKLEQAE QL+HSR   L     K +EES L+K+++DS+K+T+EQV G+MSQV K+ +FN  + + +
Sbjct:    2 SKNGAADALKTFELENNIQTID-----HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQLLDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL----DKKKEESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFNECQTTKQ 332
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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 3.651e-160
Identity = 224/333 (67.27%), Postives = 262/333 (78.68%), Query Frame = -2 
Query:  578 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1576
            MDS  AQKTWELENNI T+    PS D IF YD   Q +    KPW  DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM  Y +  K+ GR+E+ VGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP RTVSAGKV +GAFRTYP+GYKPP++  SEYQTIPLNKIEDFGVHCKQYY L+I+YFKS+LD  LLD LWNKYWVNTL SS LL N +Y  GQI DL+EKLEQ+EN L        G    + + E +L+K TRD ++ T+E +HGLM+Q++KD LFN V
Sbjct:    1 MDSDAAQKTWELENNIQTL----PSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGR------GTDVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1)

HSP 1 Score: 465.692 bits (1197), Expect = 1.454e-158
Identity = 232/331 (70.09%), Postives = 264/331 (79.76%), Query Frame = -2 
Query:  578 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1570
            S++AQKTWEL NN+  V+    S D I+ YD+  Q +    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPD+  SEYQTIPLNKIEDFGVHCKQYYAL++TYFKSSLD  LL+LLWNKYWVNTLSSS LL N DY  GQ+ DL+EKLEQ+E QL       LG      + E +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct:    6 SSVAQKTWELSNNMQEVQ----SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 8.887e-158
Identity = 233/335 (69.55%), Postives = 265/335 (79.10%), Query Frame = -2 
Query:  566 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSS 1570
            S+IA KTWEL N++  V+    S D I+ YD+  Q +    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPD+  SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD  LL+LLWNKYWVNTLSSS LL N DY  GQ+ DL+EKLEQAE QL       LG      + E +LAK TRDS K T+E +HGLMSQVIKD LFN V  S+
Sbjct:    4 SSIAMKTWELSNSMQEVQ----SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF-MLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTSA 333
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 9.537e-158
Identity = 231/331 (69.79%), Postives = 264/331 (79.76%), Query Frame = -2 
Query:  578 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1570
            S++AQKTWEL NN+  V+    S D I+ YD+  Q +    KPW  D HYFK  K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPD+  SEYQTIPLNKIEDFGVHCKQYYAL++TYFKSSLD  LL+LLWNKYWVNTLSSS LL N +Y  GQ+ DL+EKLEQ+E QL       LG      + E +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct:    4 SSVAQKTWELSNNMQEVQ----SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNAEYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLESHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 329
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4)

HSP 1 Score: 462.225 bits (1188), Expect = 3.125e-157
Identity = 232/334 (69.46%), Postives = 263/334 (78.74%), Query Frame = -2 
Query:  569 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 1570
            S +AQKTWEL NN+   +    S D I+ YD+  Q +    KPW  D HYFK  KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPD+  SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD  LL+LLWNKYWVNTLSSS LL N DY  GQ+ DL+EKLEQ+E QL       LG      + E +LAK TRDS K T+E +HGLMSQVIKD LFN +  S
Sbjct:    6 SGMAQKTWELANNMQEAQ----SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3)

HSP 1 Score: 461.455 bits (1186), Expect = 5.202e-157
Identity = 231/331 (69.79%), Postives = 262/331 (79.15%), Query Frame = -2 
Query:  578 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1570
            S +AQKTWEL NN+   +    S D I+ YD+  Q +    KPW  D HYFK  KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM  Y +  KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPD+  SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD  LL+LLWNKYWVNTLSSS LL N DY  GQ+ DL+EKLEQ+E QL       LG      + E +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct:    6 SGMAQKTWELANNMQEAQ----SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 6.504e-132
Identity = 184/328 (56.10%), Postives = 238/328 (72.56%), Query Frame = -2 
Query:  587 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILF 1570
            S++ Q+ WE ENN+  V       DSIF Y+   Q + +  KPW  DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AYEYM  YS+     GR E VVGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP RT+SAGKV+IGAFRTYPEGY+PPDD  SEYQ+IPL KIEDFGVHCK+YY+LD+++FKS LD H+L  LWN YW++TLSSSPL  N +++  QI D+ +KL   + +L  +         + +     L K+  D+  +  E   G +S ++K +LF
Sbjct:   10 SSVPQRNWEKENNVQNV-------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWISTLSSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLN--------DRSVDGHEALMKVVTDAKAVGDELETGRISHLVKQLLF 322
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: B9ILG7_POPTR (COP9 complex family protein OS=Populus trichocarpa GN=POPTR_0018s03690g PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 319/358 (89.11%), Postives = 339/358 (94.69%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETPDPS--------SDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            S+IAQKTWELENNI T++T  P+        SD+IF+YD+AAQAKF QEKPW+NDP+YF+RV+ISALALLKMVVHARSGGTIEVMGLMQGKTDGD+IIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLE AENQLAHSR+GPL  P++K  EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+RS+ + SGPEPM+ET
Sbjct:    9 SSIAQKTWELENNIKTIDTSTPTIATGTSFLSDAIFHYDDAAQAKFLQEKPWSNDPNYFRRVRISALALLKMVVHARSGGTIEVMGLMQGKTDGDSIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMAPQRKKDEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNRSRAETSGPEPMVET 366
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: V4WAN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008736mg PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 322/361 (89.20%), Postives = 338/361 (93.63%), Query Frame = -2 
Query:  521 MDSAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL--GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDS+IAQKTWELENNI+++ETP         +SD+IF+YDE AQ KFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+PISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR GPL   PPR+K QE+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+++    S PEPMIE+
Sbjct:    1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAGPSDPEPMIES 361
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0A0LPC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G378560 PE=4 SV=1)

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 321/358 (89.66%), Postives = 338/358 (94.41%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            S IAQKTWELENNI++V+TP       D +SD+IFYYDEAAQAKFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+P+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ ENQLAHSR GPL  P ++K +E+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQ ++S+ + S PEPM+E+
Sbjct:    8 SQIAQKTWELENNIISVDTPPTTSKASDSASDAIFYYDEAAQAKFQQEKPWQNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQVENQLAHSRFGPLIAPSQRKKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQPNKSRPESSSPEPMVES 365
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A067FMD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018085mg PE=4 SV=1)

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 319/360 (88.61%), Postives = 338/360 (93.89%), Query Frame = -2 
Query:  521 MDSAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDS+IAQKTWELENNI+++ETP         +SD+IF+YDE AQ KFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+PISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR GPL  PP ++ +E+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+++  + S PEPMIE+
Sbjct:    1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 360
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: M5XNA2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007500mg PE=4 SV=1)

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 322/366 (87.98%), Postives = 341/366 (93.17%), Query Frame = -2 
Query:  521 MDSAIAQKTWELENNILTVETP--------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSR-----SQNDQSGPEPMIET 1576
            MD+ IAQ+TWELENNI+ ++TP        DPS+D+IFYYDEAAQAKFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKV+IGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN L+HSR GPL  PP++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS++     S  + S PEPM+E+
Sbjct:    1 MDAQIAQQTWELENNIIPMDTPPSVAKSKADPSADAIFYYDEAAQAKFQQEKPWTNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVDIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENHLSHSRFGPLITPPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNKSLTQPSLTEPSDPEPMVES 366
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: V4UGT0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008736mg PE=4 SV=1)

HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0
Identity = 319/360 (88.61%), Postives = 337/360 (93.61%), Query Frame = -2 
Query:  521 MDSAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDS+IAQKTWELENNI+++ETP         +SD+IF+YDE AQ KFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+PISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR GPL  PP ++ +E+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+++    S PEPMIE+
Sbjct:    1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAGPSDPEPMIES 360
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2TKS6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1)

HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 324/352 (92.05%), Postives = 324/352 (92.05%), Query Frame = -2 
Query:  521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576
            MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK                            VIKDILFNSVRQSSRSQNDQSGPEPMIET
Sbjct:    1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK----------------------------VIKDILFNSVRQSSRSQNDQSGPEPMIET 324
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: M1AJ46_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009240 PE=4 SV=1)

HSP 1 Score: 658.292 bits (1697), Expect = 0.000e+0
Identity = 314/357 (87.96%), Postives = 336/357 (94.12%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            +A+AQ+TWELENNI+T++ P      + +SD+IF+YD+AAQ KFQ+EKPW +DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LD+TYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL HSR GPL   P++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV QS +SQ + S PEPMIET
Sbjct:   11 AAMAQQTWELENNIVTMDAPSGSAPENSASDAIFHYDDAAQTKFQREKPWTSDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLPHSRFGPLVAAPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVCQSGKSQTEPSDPEPMIET 367
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: M1CK31_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026918 PE=4 SV=1)

HSP 1 Score: 657.522 bits (1695), Expect = 0.000e+0
Identity = 313/357 (87.68%), Postives = 338/357 (94.68%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            +A+AQ+TWELENNI+T++ P      + +SD+IF+YD+AAQ KFQ+EKPWA+DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLE AENQL++SR   L  PP++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV +SS+SQ + SGPEPMIE+
Sbjct:   11 AAMAQQTWELENNIVTIDAPSGSTPENSASDAIFHYDDAAQTKFQREKPWASDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLSNSRYASLMAPPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVGKSSKSQTEPSGPEPMIES 367
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: K4C935_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g073150.2 PE=4 SV=1)

HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 312/357 (87.39%), Postives = 337/357 (94.40%), Query Frame = -2 
Query:  521 SAIAQKTWELENNILTVETP------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570
            +A+AQ+TWELENNI+T++ P      + +SD+IF+YD+AAQ KFQ+EKPWA+DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDC LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLE AENQL++SR   L  PP++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV +SS+SQ + SGPEPMIE+
Sbjct:   11 AAMAQQTWELENNIVTIDAPSGSKPENSASDAIFHYDDAAQTKFQREKPWASDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLSNSRYASLMAPPQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVGKSSKSQTESSGPEPMIES 367
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
CSN5B_ARATH0.000e+084.94COP9 signalosome complex subunit 5b OS=Arabidopsis... [more]
CSN5A_ARATH0.000e+084.62COP9 signalosome complex subunit 5a OS=Arabidopsis... [more]
CSN5_DICDI4.493e-16365.59COP9 signalosome complex subunit 5 OS=Dictyosteliu... [more]
CSN5_DROME3.651e-16067.27COP9 signalosome complex subunit 5 OS=Drosophila m... [more]
CSN5_XENTR1.454e-15870.09COP9 signalosome complex subunit 5 OS=Xenopus trop... [more]
CSN5_DANRE8.887e-15869.55COP9 signalosome complex subunit 5 OS=Danio rerio ... [more]
CSN5_XENLA9.537e-15869.79COP9 signalosome complex subunit 5 OS=Xenopus laev... [more]
CSN5_HUMAN3.125e-15769.46COP9 signalosome complex subunit 5 OS=Homo sapiens... [more]
CSN5_MOUSE5.202e-15769.79COP9 signalosome complex subunit 5 OS=Mus musculus... [more]
CSN5_CAEEL6.504e-13256.10COP9 signalosome complex subunit 5 OS=Caenorhabdit... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9ILG7_POPTR0.000e+089.11COP9 complex family protein OS=Populus trichocarpa... [more]
V4WAN0_9ROSI0.000e+089.20Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A0A0LPC3_CUCSA0.000e+089.66Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A067FMD4_CITSI0.000e+088.61Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
M5XNA2_PRUPE0.000e+087.98Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
V4UGT0_9ROSI0.000e+088.61Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A0D2TKS6_GOSRA0.000e+092.05Uncharacterized protein OS=Gossypium raimondii GN=... [more]
M1AJ46_SOLTU0.000e+087.96Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
M1CK31_SOLTU0.000e+087.68Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4C935_SOLLC0.000e+087.39Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availableGENE3D3.40.140.10coord: 55..187
e-value: 5.9E-9
score: 35.2
NoneNo IPR availablePANTHERPTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDcoord: 7..352
NoneNo IPR availablePANTHERPTHR10410:SF6COP9 SIGNALOSOME COMPLEX SUBUNIT 5coord: 7..352
NoneNo IPR availableSUPERFAMILY102712JAB1/MPN domaincoord: 55..192
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 55..192
e-value: 4.6E-47
score: 172.3
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 53..164
e-value: 2.4E-34
score: 117.7

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097272 ID=g.barbadense_cottongen_reftransV1_0097272; Name=g.barbadense_cottongen_reftransV1_0097272; organism=Gossypium barbadense; type=contig; length=1847bp
GGAGAAAGATATAACTGCAAACTTGGGTTGGGCCCAACTCAACAATAGTT
TAGTAATATGTTGTAGACTTCAGTTGTTGATTATACGACACAAAGGCCTA
GTTCACCTGAGTCCAATGGACATTTTTTTTCCTTTTGGTGTTCTTCATTT
CACTGCAAGTATTCTCAACTAGTACCCCTTCTAATTTTGTAAAACTGCCA
GACAGGAATCAAATTAAGGAAATTTTATCACTCCACTCCATAACCAGCTT
ACATAGGAAAATTGAAATTAACAATTTTAAAATACTGTGATTTGATTCCA
TGCAAATATTTCTTCAACAACAATGCATAAACTAAGAATTATGCAAAAAG
CTTAGTTCAAAACAAATTAAGACCCCTTCCCAACAGGATAGGCTTACATC
AGTAGTGCAAGGAAGGGTACAAAACTATCCAGCCTGGAATCCAATATATA
TTTCCTTCTTGTAAAAAACTGGTCTCTCACGCTCAAGGTAACCATTTCAT
CTGGCAGGATGTTAGAATTAGGTTTCAATCATAGGCTCAGGACCAGACTG
ATCGTTCTGGGACCTACTCGACTGTCGTACAGAGTTGAAAAGAATGTCTT
TGATGACCTGTGACATTAAACCATGGACTTGCTCCACAGTTATCTTTGCA
CTATCTCTAGTAATCTTAGCAAGCTGAGATTCTTCCTGCAACTTCTTTCG
AGGGGGTCCTAGTGGGCCAATGCGAGAGTGAGCCAATTGGTTCTCTGCTT
GCTCCAGCTTTTCAGCTAAATCTGAAATTTGTCCTGCAACATAATCTCCA
TTACCCAAGAGAGGTGAAGAAGAAAGGGTGTTTACCCAGTACTTATTCCA
TAACAGATCCAGGAGGTGACAATCAAGTGAGGATTTGAAATAAGTGATGT
CCAATGCATAATACTGTTTACAATGCACACCAAAGTCTTCAATCTTATTC
AGAGGAATGGTCTGATATTCAGAGATAGGGTCATCAGGAGGCTTATATCC
TTCAGGGTATGTCCTGAAAGCTCCAATCTCAACTTTTCCAGCGGAAACAG
TCCTTGTTGGGTCAATTACAACCGCCAGGAAGGGCTCCTGGAACTGCTGG
TTAAGCATTTGGGTTGAAACATCAATACCGGACAGCCAGCATCCATACCC
GGGATGTGAATGGTACCATCCAACAACATTTTCCAATCGCCCAGCCTGCT
TGTTGGTCTGGGAATAATCGACCATATACTCATAGGCATCCGCCTGAGCG
TTAACCCTAGTCTCAGTGCCTTCAACAGGCAAAGCAAAGGCGTCCATGAC
AATGATAGCATCGCCGTCAGTCTTGCCTTGCATCAGCCCCATCACCTCTA
TGGTACCACCAGATCGGGCGTGGACAACCATCTTAAGAAGAGCGAGCGCA
GAGATCTTAACGCGCTTGAAGTAGTGAGGATCATTGGCCCAAGGCTTCTC
TTGCTGGAACTTGGCTTGAGCCGCCTCGTCGTAGTAGAATATAGAATCCG
ATGAAGGGTCAGGTGTCTCGACGGTAAGTATATTGTTTTCTAATTCCCAT
GTTTTCTGAGCTATGGCAGAATCCATTCTTGTTCTTCAAATTCTCTCTAA
CTGAAGCACCCCAGGCCTAGGTTTTAATTTTATAGATATCAATTATCAAG
CACCGAGAGGAGAAGAGTGGGGAGAGAGGGATGGATTGAAAAAACCATCG
CCATTCGCCACCCTCCCCTAGGATTGAGGCCCATTACGACACTGTTCGGC
AGTTATTGGGCTTGGCCTTTAATTCTGGCTCCACAATACTGGTTTGGTGG
CTCACTGATTATATAATTTCCTTTTAATTATCATGCATGACATAGCA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding