g.barbadense_cottongen_reftransV1_0097269, g.barbadense_cottongen_reftransV1_0097269 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: V4LKU9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022640mg PE=4 SV=1) HSP 1 Score: 427.172 bits (1097), Expect = 8.985e-138 Identity = 217/486 (44.65%), Postives = 310/486 (63.79%), Query Frame = -3 Query: 377 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1810 +R M E NSS+IL+ + T+R DP FK Y GGW+I++ HY +SV Y++ PF ++A VWF+ FG+ L C C CCC R +PYGYSR+AYA SLI LI FTIA V GC ++TG+GKF S +D Y+V Q +N+ + ++L +AK + + + +P D+ +D I+S + +K+ + ++I+ +L + ALI I ML LAF+GFL S+ G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E+ K V+ + +L++ I +AN N NQSGP +P++C+P+ S C EV L NATE WK Y CQ+ G C+T GRLTP +YT+M AVN+S GLY Y PF+A + C ++ T +I +HCPGLK+Y+ W+Y GLV + +VM SL FWV+YARERRHR YTK N + E+P Sbjct: 43 ERFMAEENGENSSLILSAKRTKRKDPTENFKLYTGGWNISNSHYWSSVAYTAMPFVVIAAVWFVFFGLSLSIICFCFCCCAR-QPYGYSRVAYALSLILLISFTIAAVVGCVFLYTGQGKFHTSTSDTLDYVVRQANFTSENLRNVSDYLNAAKKIDVQSIVLPGDVLSSIDNIQGKINSSATTLSVKTMENQEKIQNVLDNMRLALIIIAAVMLFLAFIGFLLSVFGLRCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARELLTRTKLVSYQLVNLVDNAINNMANRNIPPQLQPLYYNQSGPLMPVLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIVTPGTCSTQGRLTPKLYTQMAAAVNVSYGLYKYGPFLADLRSCDFVRSTFTDIERDHCPGLKRYTRWIYVGLVLVSTAVMLSLVFWVIYARERRHRVYTKDYNAMHSEAP 527
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D3E2T7_BRAOL (Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 1.387e-137 Identity = 225/516 (43.60%), Postives = 327/516 (63.37%), Query Frame = -3 Query: 377 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1900 FL+++T S++ + E ++ + + +R M E + NSS+ILA T+R DP F Y GGW+I++ HY SV Y++APF ++A VWF++FG+ L C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+ KF AS D Y+V Q +N+ + ++L +AK V + + +P D+ +D I+S + +++ + D I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCGLFL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A E K VT + ++++ F+ +AN N NQSGP +PL+C+P+ S C EV L NATE WK Y C+ G C+TPGRLTP+ YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGL++Y++W+Y GLV + +VM SL FWV+YARERRHR YTK N + E+P Sbjct: 77 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTAAPFFVIAGVWFVIFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIVGCVFLYTGQEKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGLFLLLHNVVGDTCVAMDQWVQNPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLNNATEVWKSYTCEYITTGTCSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAP 588
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078ILY2_BRANA (BnaC03g45140D protein OS=Brassica napus GN=BnaC03g45140D PE=4 SV=1) HSP 1 Score: 426.787 bits (1096), Expect = 1.457e-137 Identity = 218/485 (44.95%), Postives = 312/485 (64.33%), Query Frame = -3 Query: 377 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1807 R M E NSS++LA + T+R DP FK Y GGW+I++ HY+ SV Y++ PFA++A VWF+ FG+ L C C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +A+ V + + +P D+ +++ + I+S + +K+ + D+I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + +LL+ I + N N NQSGP +PL+C+P+ S C EV L NATE WK Y CQ+ G C+T GR+TP +YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGLK+Y++W+Y GL+ + +VM SL FWV+Y+RERRHR YTK N + E+P Sbjct: 42 RFMAEESGENSSLVLAAKRTKRKDPTENFKLYTGGWNISNSHYVFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQSKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTQWIYVGLMLVSTAVMLSLVFWVIYSRERRHRVYTKDYNATHSEAP 525
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M1CGR5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026099 PE=4 SV=1) HSP 1 Score: 426.787 bits (1096), Expect = 2.997e-137 Identity = 233/542 (42.99%), Postives = 333/542 (61.44%), Query Frame = -3 Query: 356 LFLILSTLF----SVSHGRKNENVDLQSDGIMRLVKRKMEETESR--------------NSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1903 + L L T+F + +HG + QS + ++ E SR +SS+ILA E T R DPLN FK Y GGW+I +HY ASV Y++ PF + A++WF++FG+ LL C+C CC R +PYGYS +AYA SLIFL LFTIA + GC +++TG+ KF +S + Y+V+Q D ++ + +L +AK + ++ +P +++ ++D I S S K+ D D+I L++ + TALI ++V ML L FLGF+FS+ GM+ VY+ V+ GWI+IT T LCG+FLV HN+ +DTC+AMDEWIQ+P A +A+ ++LPC D A +E K VT N+ D++NQ IT ++N N + NQSGP +P++C+ + + +CG EV L NAT+ YVCQVS G C TPGRLTP +Y++M AVN+S GLY Y PF+ + +C ++ T +I HCPGL +YS+ VY GLV T +V+ SL FW++YARERRHR Y K DE V G K+ Sbjct: 7 MLLSLLTIFIFFSNFTHGDGGTDSHFQSPPLSDEFRKGRNEVFSRLYAEGPNIVEPPVQSSSLILAAERTYRKDPLNGFKRYNGGWNINDRHYWASVAYTAVPFFITALIWFVIFGLCLLFICVCSRCCKR-EPYGYSAMAYALSLIFLALFTIAAIIGCVILYTGQEKFHSSTLNTMDYVVHQANVTADTLMNVSVYLAAAKQLAVDRILIPANVQTDIDYVQTKITSSASTLSTKTADNKDDIEHLIESVRTALIVLSVAMLALTFLGFVFSMFGMQVFVYILVIFGWILITGTLILCGIFLVLHNVTADTCVAMDEWIQNPTAHTALDDILPCVDYATAQETLTKSKEVTYNLVDIVNQVITNVSNINFSPNFAPFYYNQSGPVLPILCNLFNPDLTSHNCGPAEVDLNNATQVLNSYVCQVSPSGVCVTPGRLTPTLYSQMAAAVNMSYGLYQYGPFLVDLQNCDFVRQTFGDIYNVHCPGLLQYSKRVYVGLVMVTVAVLLSLTFWIIYARERRHRVYKKEHMSKLDEGIEVEGDKI 547
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: V7B0P9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G210800g PE=4 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 1.670e-136 Identity = 216/481 (44.91%), Postives = 314/481 (65.28%), Query Frame = -3 Query: 392 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKG 1810 +R M E N+S+ILA+ T R DPL+ F Y GGW+I+++HY+ASV +++ PF ++A VWF++FG+ L C+C CCC R +PYGYSRLAYA SLIFLILFT+A + GC L++T +GKF S Y+V Q +N+ + ++L +AK + ++ F+P D++ E+D+ I+S S K++D ++ I+ ++ + AL+ + ML+LAF+GFL SI G++ VY ++IGWI++ TF LCG+FL HN+V DTC+AMD+W+Q+P A +A+ E+LPC D A +E + VT + L+N ++ + N N NQSGP +PL+C+P+ + SC EVPL NA E WK Y C+VS G C TPGR+TP +Y ++ AVNIS GLY Y PF+ + DC+ ++ T +I +HCPGL+ SE +Y GLV + +VM SL FWV+YARERRHR YTK+ G Sbjct: 60 RRSMAEDAPSNTSLILAQRRTTRKDPLDDFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSLICLCYCCCPR-EPYGYSRLAYALSLIFLILFTVAAIVGCVLLYTAQGKFHGSTTSTLEYVVGQAEFTAENLRNVSDYLDAAKKIGVDAVFLPADVQKEIDEIKTKINSSASELSSKTKDNSETIKDVIDAMRLALVILAAVMLVLAFVGFLLSIFGLQGLVYFLILIGWILVAGTFVLCGIFLFLHNVVGDTCVAMDQWVQNPTAQTALDEILPCVDNATAQETLTRTRDVTHELVKLVNNIVSNVTNRNFPPAAGPLYYNQSGPLMPLLCNPFNPDLTNRSCAPGEVPLDNAAEGWKNYTCEVSSSGICKTPGRMTPIIYGQIEAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDIGNDHCPGLQTNSELIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG 539
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M4D9J4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra013154 PE=4 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 2.668e-136 Identity = 218/485 (44.95%), Postives = 310/485 (63.92%), Query Frame = -3 Query: 377 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1807 R M E NSS++LA + T+R DP FK Y GGW+I++ HY+ SV Y++ PFA++A VWF+ FG+ L C C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +A+ V + + +P D+ +++ + I+S + +K+ + D+I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + +LL+ I + N N NQSGP +PL+C+P+ S C EV L NATE WK Y CQ+ G C+T GR+TP +YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGLK+Y+ W+Y GL+ + +VM SL FWV+YARERRHR YTK + E+P Sbjct: 42 RFMAEESGENSSLVLAAKRTKRKDPTENFKLYTGGWNISNSHYIFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQTKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTRWIYVGLMLVSTAVMLSLVFWVIYARERRHRVYTKDYIATHSEAP 525
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0A0LWI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264530 PE=4 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 2.957e-136 Identity = 220/484 (45.45%), Postives = 317/484 (65.50%), Query Frame = -3 Query: 383 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN--------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDE 1807 R + E+ NSS+ILA+ T R DPLN F+ Y GGW+I +KHY ASV +++APF ++A +WF++FG+ L C+C CCC R +PYGYSRLAYA SLIFLILFTIA + GC +++TG+GKF + Y+V Q N+ + +L +AK + + F+ D++G +D+ ++ ++S K+ + + I+ +L I ALI + MLLLAFLGFLFSILGM++ VY V+IGWI++ TF LCG+FL+ HN+V+DTC++M+EW+Q+P A +A+ ++LPC D A +E K V + D++N IT ++N N NQSGP +P++C+P+ + C EV L NAT WK +VC+ S G CTTPGRLTP Y++M AVN++ GLY Y P++ + DCS ++ T +I N+CPGL +Y++W+Y GLV + +VM SL FWV+YARERRHR YTK Y + Sbjct: 54 RNLAESTVDNSSLILAETRTNRKDPLNNFQRYTGGWNIKNKHYWASVAFTAAPFFVIAGIWFVVFGLSLFLICLCYCCCRR-EPYGYSRLAYALSLIFLILFTIAAIVGCIVLYTGQGKFHSITTKTLDYVVGQAEDTVVNLRNVSGYLSAAKKIGVATAFLSPDIQGRIDEIDRKLNSSAITLSEKTGENSKNIQYVLDHIRLALIILAAIMLLLAFLGFLFSILGMQSLVYSLVIIGWILVAGTFILCGVFLLLHNVVADTCVSMNEWVQNPTAHTALDDILPCVDNATAQETLTQSKNVAFQLVDVVNNVITGISNANFPPSAGAPFYFNQSGPSMPILCNPFYANLTDRLCASGEVELGNATVVWKNFVCEASASGICTTPGRLTPTYYSQMTAAVNVTFGLYKYGPYLVSLQDCSFVRQTFTDIQDNYCPGLGRYTQWIYIGLVMVSAAVMLSLIFWVIYARERRHRVYTKSHMGNYSQ 536
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: D7LB52_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899530 PE=4 SV=1) HSP 1 Score: 422.55 bits (1085), Expect = 7.172e-136 Identity = 227/509 (44.60%), Postives = 325/509 (63.85%), Query Frame = -3 Query: 362 GRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGK 1864 G NE V + +++R + E NSS+ILA + T+R DP + FK Y GGW+I++ HYL SVGY++ PF ++A+VWF+ FG+ L C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V+Q +N+ + ++L +AK V + + +P D+ +D I+S + +K+ + D+I+ +L + AL+ I ML LAF+GFL SI G++ VY V++GWI++T+TF LCG FL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A E + K VT + +LL+ I+ + N N NQSGP +PL+C+P+ S C EV L NATE WK + CQ+ G C+T GRLTP +Y++M AVN+S GLY Y PF+A + C ++ T +I +HCPGLK+Y++W+Y GLV + SVM SL FWV+YARERRHR YTK N + E P G+ Sbjct: 33 GVGNEEVGGVEEWRTSVIERVIAEESGENSSLILAAKRTKRKDPNDNFKFYTGGWNISNSHYLTSVGYTAVPFIIIAVVWFVFFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIIGCIFLYTGQGKFHASTTDTLEYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDSMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNATARETLDRTKLVTYKLVNLLDNAISNMTNRNFPPQLRPLYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLNNATEVWKNFTCQIVTPGTCSTQGRLTPKLYSQMAAAVNVSYGLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYARERRHRVYTKDYNAMHSEDPRSKGQ 540
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D2U9M2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G057400 PE=4 SV=1) HSP 1 Score: 422.935 bits (1086), Expect = 8.662e-136 Identity = 231/535 (43.18%), Postives = 341/535 (63.74%), Query Frame = -3 Query: 389 RPKKLKQFYIIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETE-SRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVS-EDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR-------INKGY 1942 RP+ + + I P I S+ G K ++ L I R + +E +E + NSS+ILA++ T+R DPLN F Y GGW+I+++HY ASVG+++APF ++A +WF+LF + L CI CCC + YGYSR+AYA SLIFLILFTIA + GC +++ G+GKF AS + Y V++ +N+ + ++L +AK + +++ + D++ +D +K I++ S ++ D D I+ L ++ AL+ + ML LAFLGFLFSILG++ VY V+ GWI++ TF LCG+F + HN+ D+C+AMD+W+Q+P A +A+ ++LPC D A +E K VT + +++N I +AN N NQSGP VP++C+P+ S+ C EV L N++E WKKY C VS G CTTPGRLTP Y++M AVNIS GLY Y PF+ + DC+ ++DT +I+ +HCPGL++YS+W+Y GLV + +VM SL FWV+YARERRHR YTK+ +NKG+ Sbjct: 23 RPEVVSEASIFPTSH-IQGYHKSLVFGEKEQSEVLPWRKIER--RNLVEGSEGANNSSLILAEKRTQRKDPLNNFNKYTGGWNISNQHYWASVGFTAAPFFVIAGIWFVLFALCLFVICIRHCCCQLDS-YGYSRIAYALSLIFLILFTIAAIVGCIVLYIGQGKFHASTTNTLDYAVHKADVTAENLRNVSDYLSAAKTISVDSTILSPDIQKSIDDVDKKINASASTLSTQTGDNKDRIQHGLDRMRLALVIVAAVMLFLAFLGFLFSILGLQFLVYTLVIFGWILVAGTFILCGVFNLLHNVAGDSCVAMDQWVQNPTAHTALDDILPCVDNATAQETLLQTKNVTHQLVNVVNGIINTVANRNFPPQLAPLYYNQSGPLVPVLCNPFHSNLSERMCASGEVSLHNSSEVWKKYTCNVSTPSGICTTPGRLTPQFYSQMSAAVNISYGLYRYGPFLVNLQDCTFVRDTFTDISHDHCPGLRRYSQWIYIGLVIVSAAVMLSLMFWVIYARERRHRVYTKQHDARVEGVNKGH 553
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A067EZM7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009383mg PE=4 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 1.811e-135 Identity = 204/479 (42.59%), Postives = 320/479 (66.81%), Query Frame = -3 Query: 401 VKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNN-------TANNQSGPFVPLICDPYKHGDSQESC-GDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRI 1813 +KR + E + NS++ILA++ T+R DP++ F YKGGW+I++KHY ASVG+++APF ++A +WF++FG+ L C+ CCC R +PYGYSR YA SLI L+ FTI+ + GC +++TG+GKF +S D +Y+V Q +++ + ++L +AK + +N+ + D++ +DK ++ I+S + +++ + +I+ L + ALI + ML LAFLGFLFS+ G++ VY V++GWI++ TF LCG+FL+ HN+V+DTC++MDEW+++P A +A+ ++LPC D A +E + K VT + ++++ I + N N NQSGP +P++C+P+ + C EV NATE WK Y+CQ S G C TPGRLTP ++ +M AVN+S LY Y PF+ + DC+ ++DT +I+ +HCPGL+++S+W+Y GL + +VM SL FWV+YARERRHR YTK + Sbjct: 57 LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRR-EPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNL 534 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097269 ID=g.barbadense_cottongen_reftransV1_0097269; Name=g.barbadense_cottongen_reftransV1_0097269; organism=Gossypium barbadense; type=contig; length=2091bpback to top |