g.barbadense_cottongen_reftransV1_0097269, g.barbadense_cottongen_reftransV1_0097269 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097269
Unique Nameg.barbadense_cottongen_reftransV1_0097269
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2091
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: V4LKU9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022640mg PE=4 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 8.985e-138
Identity = 217/486 (44.65%), Postives = 310/486 (63.79%), Query Frame = -3
Query:  377 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1810
            +R M E    NSS+IL+ + T+R DP   FK Y GGW+I++ HY +SV Y++ PF ++A VWF+ FG+ L   C C CCC R +PYGYSR+AYA SLI LI FTIA V GC  ++TG+GKF  S +D   Y+V Q     +N+  + ++L +AK + + +  +P D+   +D     I+S  +   +K+ +  ++I+ +L  +  ALI I   ML LAF+GFL S+ G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E+    K V+  + +L++  I  +AN N          NQSGP +P++C+P+    S   C   EV L NATE WK Y CQ+   G C+T GRLTP +YT+M  AVN+S GLY Y PF+A +  C  ++ T  +I  +HCPGLK+Y+ W+Y GLV  + +VM SL FWV+YARERRHR YTK  N  + E+P
Sbjct:   43 ERFMAEENGENSSLILSAKRTKRKDPTENFKLYTGGWNISNSHYWSSVAYTAMPFVVIAAVWFVFFGLSLSIICFCFCCCAR-QPYGYSRVAYALSLILLISFTIAAVVGCVFLYTGQGKFHTSTSDTLDYVVRQANFTSENLRNVSDYLNAAKKIDVQSIVLPGDVLSSIDNIQGKINSSATTLSVKTMENQEKIQNVLDNMRLALIIIAAVMLFLAFIGFLLSVFGLRCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARELLTRTKLVSYQLVNLVDNAINNMANRNIPPQLQPLYYNQSGPLMPVLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIVTPGTCSTQGRLTPKLYTQMAAAVNVSYGLYKYGPFLADLRSCDFVRSTFTDIERDHCPGLKRYTRWIYVGLVLVSTAVMLSLVFWVIYARERRHRVYTKDYNAMHSEAP 527          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D3E2T7_BRAOL (Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 429.098 bits (1102), Expect = 1.387e-137
Identity = 225/516 (43.60%), Postives = 327/516 (63.37%), Query Frame = -3
Query:  377 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1900
            FL+++T  S++   + E   ++ +    + +R M E +  NSS+ILA   T+R DP   F  Y GGW+I++ HY  SV Y++APF ++A VWF++FG+ L   C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+ KF AS  D   Y+V Q     +N+  + ++L +AK V + +  +P D+   +D     I+S  +   +++ +  D I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCGLFL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A   E     K VT  + ++++ F+  +AN N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y C+    G C+TPGRLTP+ YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGL++Y++W+Y GLV  + +VM SL FWV+YARERRHR YTK  N  + E+P
Sbjct:   77 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTAAPFFVIAGVWFVIFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIVGCVFLYTGQEKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGLFLLLHNVVGDTCVAMDQWVQNPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLNNATEVWKSYTCEYITTGTCSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAP 588          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078ILY2_BRANA (BnaC03g45140D protein OS=Brassica napus GN=BnaC03g45140D PE=4 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 1.457e-137
Identity = 218/485 (44.95%), Postives = 312/485 (64.33%), Query Frame = -3
Query:  377 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1807
            R M E    NSS++LA + T+R DP   FK Y GGW+I++ HY+ SV Y++ PFA++A VWF+ FG+ L   C C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +A+ V + +  +P D+  +++   + I+S  +   +K+ +  D+I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + +LL+  I  + N N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y CQ+   G C+T GR+TP +YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGLK+Y++W+Y GL+  + +VM SL FWV+Y+RERRHR YTK  N  + E+P
Sbjct:   42 RFMAEESGENSSLVLAAKRTKRKDPTENFKLYTGGWNISNSHYVFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQSKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTQWIYVGLMLVSTAVMLSLVFWVIYSRERRHRVYTKDYNATHSEAP 525          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M1CGR5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026099 PE=4 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 2.997e-137
Identity = 233/542 (42.99%), Postives = 333/542 (61.44%), Query Frame = -3
Query:  356 LFLILSTLF----SVSHGRKNENVDLQSDGIMRLVKRKMEETESR--------------NSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1903
            + L L T+F    + +HG    +   QS  +    ++   E  SR              +SS+ILA E T R DPLN FK Y GGW+I  +HY ASV Y++ PF + A++WF++FG+ LL  C+C  CC R +PYGYS +AYA SLIFL LFTIA + GC +++TG+ KF +S  +   Y+V+Q     D ++ +  +L +AK + ++   +P +++ ++D     I S  S    K+ D  D+I  L++ + TALI ++V ML L FLGF+FS+ GM+  VY+ V+ GWI+IT T  LCG+FLV HN+ +DTC+AMDEWIQ+P A +A+ ++LPC D A  +E     K VT N+ D++NQ IT ++N N +        NQSGP +P++C+ +    +  +CG  EV L NAT+    YVCQVS  G C TPGRLTP +Y++M  AVN+S GLY Y PF+  + +C  ++ T  +I   HCPGL +YS+ VY GLV  T +V+ SL FW++YARERRHR Y K      DE   V G K+
Sbjct:    7 MLLSLLTIFIFFSNFTHGDGGTDSHFQSPPLSDEFRKGRNEVFSRLYAEGPNIVEPPVQSSSLILAAERTYRKDPLNGFKRYNGGWNINDRHYWASVAYTAVPFFITALIWFVIFGLCLLFICVCSRCCKR-EPYGYSAMAYALSLIFLALFTIAAIIGCVILYTGQEKFHSSTLNTMDYVVHQANVTADTLMNVSVYLAAAKQLAVDRILIPANVQTDIDYVQTKITSSASTLSTKTADNKDDIEHLIESVRTALIVLSVAMLALTFLGFVFSMFGMQVFVYILVIFGWILITGTLILCGIFLVLHNVTADTCVAMDEWIQNPTAHTALDDILPCVDYATAQETLTKSKEVTYNLVDIVNQVITNVSNINFSPNFAPFYYNQSGPVLPILCNLFNPDLTSHNCGPAEVDLNNATQVLNSYVCQVSPSGVCVTPGRLTPTLYSQMAAAVNMSYGLYQYGPFLVDLQNCDFVRQTFGDIYNVHCPGLLQYSKRVYVGLVMVTVAVLLSLTFWIIYARERRHRVYKKEHMSKLDEGIEVEGDKI 547          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: V7B0P9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G210800g PE=4 SV=1)

HSP 1 Score: 424.091 bits (1089), Expect = 1.670e-136
Identity = 216/481 (44.91%), Postives = 314/481 (65.28%), Query Frame = -3
Query:  392 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKG 1810
            +R M E    N+S+ILA+  T R DPL+ F  Y GGW+I+++HY+ASV +++ PF ++A VWF++FG+ L   C+C CCC R +PYGYSRLAYA SLIFLILFT+A + GC L++T +GKF  S      Y+V Q     +N+  + ++L +AK + ++  F+P D++ E+D+    I+S  S    K++D ++ I+ ++  +  AL+ +   ML+LAF+GFL SI G++  VY  ++IGWI++  TF LCG+FL  HN+V DTC+AMD+W+Q+P A +A+ E+LPC D A  +E     + VT  +  L+N  ++ + N N          NQSGP +PL+C+P+    +  SC   EVPL NA E WK Y C+VS  G C TPGR+TP +Y ++  AVNIS GLY Y PF+  + DC+ ++ T  +I  +HCPGL+  SE +Y GLV  + +VM SL FWV+YARERRHR YTK+   G
Sbjct:   60 RRSMAEDAPSNTSLILAQRRTTRKDPLDDFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSLICLCYCCCPR-EPYGYSRLAYALSLIFLILFTVAAIVGCVLLYTAQGKFHGSTTSTLEYVVGQAEFTAENLRNVSDYLDAAKKIGVDAVFLPADVQKEIDEIKTKINSSASELSSKTKDNSETIKDVIDAMRLALVILAAVMLVLAFVGFLLSIFGLQGLVYFLILIGWILVAGTFVLCGIFLFLHNVVGDTCVAMDQWVQNPTAQTALDEILPCVDNATAQETLTRTRDVTHELVKLVNNIVSNVTNRNFPPAAGPLYYNQSGPLMPLLCNPFNPDLTNRSCAPGEVPLDNAAEGWKNYTCEVSSSGICKTPGRMTPIIYGQIEAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDIGNDHCPGLQTNSELIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG 539          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M4D9J4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra013154 PE=4 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 2.668e-136
Identity = 218/485 (44.95%), Postives = 310/485 (63.92%), Query Frame = -3
Query:  377 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1807
            R M E    NSS++LA + T+R DP   FK Y GGW+I++ HY+ SV Y++ PFA++A VWF+ FG+ L   C C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +A+ V + +  +P D+  +++   + I+S  +   +K+ +  D+I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + +LL+  I  + N N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y CQ+   G C+T GR+TP +YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGLK+Y+ W+Y GL+  + +VM SL FWV+YARERRHR YTK     + E+P
Sbjct:   42 RFMAEESGENSSLVLAAKRTKRKDPTENFKLYTGGWNISNSHYIFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQTKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTRWIYVGLMLVSTAVMLSLVFWVIYARERRHRVYTKDYIATHSEAP 525          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0A0LWI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264530 PE=4 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 2.957e-136
Identity = 220/484 (45.45%), Postives = 317/484 (65.50%), Query Frame = -3
Query:  383 RKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN--------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDE 1807
            R + E+   NSS+ILA+  T R DPLN F+ Y GGW+I +KHY ASV +++APF ++A +WF++FG+ L   C+C CCC R +PYGYSRLAYA SLIFLILFTIA + GC +++TG+GKF +       Y+V Q      N+  +  +L +AK + +   F+  D++G +D+ ++ ++S       K+ + +  I+ +L  I  ALI +   MLLLAFLGFLFSILGM++ VY  V+IGWI++  TF LCG+FL+ HN+V+DTC++M+EW+Q+P A +A+ ++LPC D A  +E     K V   + D++N  IT ++N N           NQSGP +P++C+P+    +   C   EV L NAT  WK +VC+ S  G CTTPGRLTP  Y++M  AVN++ GLY Y P++  + DCS ++ T  +I  N+CPGL +Y++W+Y GLV  + +VM SL FWV+YARERRHR YTK     Y +
Sbjct:   54 RNLAESTVDNSSLILAETRTNRKDPLNNFQRYTGGWNIKNKHYWASVAFTAAPFFVIAGIWFVVFGLSLFLICLCYCCCRR-EPYGYSRLAYALSLIFLILFTIAAIVGCIVLYTGQGKFHSITTKTLDYVVGQAEDTVVNLRNVSGYLSAAKKIGVATAFLSPDIQGRIDEIDRKLNSSAITLSEKTGENSKNIQYVLDHIRLALIILAAIMLLLAFLGFLFSILGMQSLVYSLVIIGWILVAGTFILCGVFLLLHNVVADTCVSMNEWVQNPTAHTALDDILPCVDNATAQETLTQSKNVAFQLVDVVNNVITGISNANFPPSAGAPFYFNQSGPSMPILCNPFYANLTDRLCASGEVELGNATVVWKNFVCEASASGICTTPGRLTPTYYSQMTAAVNVTFGLYKYGPYLVSLQDCSFVRQTFTDIQDNYCPGLGRYTQWIYIGLVMVSAAVMLSLIFWVIYARERRHRVYTKSHMGNYSQ 536          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: D7LB52_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899530 PE=4 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 7.172e-136
Identity = 227/509 (44.60%), Postives = 325/509 (63.85%), Query Frame = -3
Query:  362 GRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGK 1864
            G  NE V    +    +++R + E    NSS+ILA + T+R DP + FK Y GGW+I++ HYL SVGY++ PF ++A+VWF+ FG+ L   C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V+Q     +N+  + ++L +AK V + +  +P D+   +D     I+S  +   +K+ +  D+I+ +L  +  AL+ I   ML LAF+GFL SI G++  VY  V++GWI++T+TF LCG FL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A   E  +  K VT  + +LL+  I+ + N N          NQSGP +PL+C+P+    S   C   EV L NATE WK + CQ+   G C+T GRLTP +Y++M  AVN+S GLY Y PF+A +  C  ++ T  +I  +HCPGLK+Y++W+Y GLV  + SVM SL FWV+YARERRHR YTK  N  + E P   G+
Sbjct:   33 GVGNEEVGGVEEWRTSVIERVIAEESGENSSLILAAKRTKRKDPNDNFKFYTGGWNISNSHYLTSVGYTAVPFIIIAVVWFVFFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIIGCIFLYTGQGKFHASTTDTLEYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDSMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNATARETLDRTKLVTYKLVNLLDNAISNMTNRNFPPQLRPLYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLNNATEVWKNFTCQIVTPGTCSTQGRLTPKLYSQMAAAVNVSYGLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYARERRHRVYTKDYNAMHSEDPRSKGQ 540          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D2U9M2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G057400 PE=4 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 8.662e-136
Identity = 231/535 (43.18%), Postives = 341/535 (63.74%), Query Frame = -3
Query:  389 RPKKLKQFYIIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETE-SRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVS-EDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR-------INKGY 1942
            RP+ + +  I P    I     S+  G K ++  L    I R  +  +E +E + NSS+ILA++ T+R DPLN F  Y GGW+I+++HY ASVG+++APF ++A +WF+LF + L   CI  CCC  +  YGYSR+AYA SLIFLILFTIA + GC +++ G+GKF AS  +   Y V++     +N+  + ++L +AK + +++  +  D++  +D  +K I++  S    ++ D  D I+  L ++  AL+ +   ML LAFLGFLFSILG++  VY  V+ GWI++  TF LCG+F + HN+  D+C+AMD+W+Q+P A +A+ ++LPC D A  +E     K VT  + +++N  I  +AN N          NQSGP VP++C+P+    S+  C   EV L N++E WKKY C VS   G CTTPGRLTP  Y++M  AVNIS GLY Y PF+  + DC+ ++DT  +I+ +HCPGL++YS+W+Y GLV  + +VM SL FWV+YARERRHR YTK+       +NKG+
Sbjct:   23 RPEVVSEASIFPTSH-IQGYHKSLVFGEKEQSEVLPWRKIER--RNLVEGSEGANNSSLILAEKRTQRKDPLNNFNKYTGGWNISNQHYWASVGFTAAPFFVIAGIWFVLFALCLFVICIRHCCCQLDS-YGYSRIAYALSLIFLILFTIAAIVGCIVLYIGQGKFHASTTNTLDYAVHKADVTAENLRNVSDYLSAAKTISVDSTILSPDIQKSIDDVDKKINASASTLSTQTGDNKDRIQHGLDRMRLALVIVAAVMLFLAFLGFLFSILGLQFLVYTLVIFGWILVAGTFILCGVFNLLHNVAGDSCVAMDQWVQNPTAHTALDDILPCVDNATAQETLLQTKNVTHQLVNVVNGIINTVANRNFPPQLAPLYYNQSGPLVPVLCNPFHSNLSERMCASGEVSLHNSSEVWKKYTCNVSTPSGICTTPGRLTPQFYSQMSAAVNISYGLYRYGPFLVNLQDCTFVRDTFTDISHDHCPGLRRYSQWIYIGLVIVSAAVMLSLMFWVIYARERRHRVYTKQHDARVEGVNKGH 553          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A067EZM7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009383mg PE=4 SV=1)

HSP 1 Score: 421.394 bits (1082), Expect = 1.811e-135
Identity = 204/479 (42.59%), Postives = 320/479 (66.81%), Query Frame = -3
Query:  401 VKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNN-------TANNQSGPFVPLICDPYKHGDSQESC-GDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRI 1813
            +KR + E  + NS++ILA++ T+R DP++ F  YKGGW+I++KHY ASVG+++APF ++A +WF++FG+ L   C+  CCC R +PYGYSR  YA SLI L+ FTI+ + GC +++TG+GKF +S  D  +Y+V Q     +++  + ++L +AK + +N+  +  D++  +DK ++ I+S  +    +++  + +I+  L  +  ALI +   ML LAFLGFLFS+ G++  VY  V++GWI++  TF LCG+FL+ HN+V+DTC++MDEW+++P A +A+ ++LPC D A  +E  +  K VT  +  ++++ I  + N N          NQSGP +P++C+P+    +   C   EV   NATE WK Y+CQ S  G C TPGRLTP ++ +M  AVN+S  LY Y PF+  + DC+ ++DT  +I+ +HCPGL+++S+W+Y GL   + +VM SL FWV+YARERRHR YTK +
Sbjct:   57 LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRR-EPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNL 534          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4LKU9_EUTSA8.985e-13844.65Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
A0A0D3E2T7_BRAOL1.387e-13743.60Uncharacterized protein (Fragment) OS=Brassica ole... [more]
A0A078ILY2_BRANA1.457e-13744.95BnaC03g45140D protein OS=Brassica napus GN=BnaC03g... [more]
M1CGR5_SOLTU2.997e-13742.99Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
V7B0P9_PHAVU1.670e-13644.91Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
M4D9J4_BRARP2.668e-13644.95Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
A0A0A0LWI8_CUCSA2.957e-13645.45Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
D7LB52_ARALL7.172e-13644.60Putative uncharacterized protein OS=Arabidopsis ly... [more]
A0A0D2U9M2_GOSRA8.662e-13643.18Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067EZM7_CITSI1.811e-13542.59Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31414:SF1TRANSMEMBRANE PROTEIN DDB_G0292058coord: 51..529
NoneNo IPR availablePANTHERPTHR31414FAMILY NOT NAMEDcoord: 51..529
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 309..485
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 510..536
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 486..509
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 486..508
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 286..308
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097269 ID=g.barbadense_cottongen_reftransV1_0097269; Name=g.barbadense_cottongen_reftransV1_0097269; organism=Gossypium barbadense; type=contig; length=2091bp
GGGGATAATGTTGTAACTTTACCACTACTAGATTAAAAGGAAATATGGGT
TTTCCGGAGGCTTGTCGCACGGTAGGGTACATTCCAAAATCCAAATGCAC
GGTGCAATACAATTGTTATGACTTCTCCCATTTTCTCATTGGATTTGCGG
CTGAATCTAAAGAAACTCTCGTTAGTTTAAGCAAAATGACATGTACCACA
TATTTGATGTCATTCTAAAACTCTTTCGTTCTACTGTATTTTCCATTTCT
TCTTATACCAAAGAAAGGGTTGCACATCTAGAGGTAGACATAAACGGAAA
ATATATTTTTTCCAGCCATTGATGATGTGAAAAATGTTTAAGAAAGGTTT
CGTTACAGCTTCTTCCCTCCAACAAGAGGCGACTCATCGTATCCTTTATT
GATCCTTTTCGTATACTTCCGATGCCGCCTTTCTCTAGCGTATAACACCC
AAAAGAACAACGAAAACATCACAGAACCAGTGGCGGCGACTAAGCCACTG
TAAACCCATTCGCTGTATTTCTTCAGACCTGGACAATGGTTTGTGGTTAT
ATTTTTCAAAGTGTCTTGGATTATGCTGCAGTCAGCAACGCCAGCAATGA
AGGGATTATAGTCATATAACCCGTTGCTTATATTCACTGCTTTAATCATC
TCAGTATACATGTCTGGTGTTAGACGGCCTGGTGTGGTGCAATCACCATC
TTCTGAAACTTGACATACATATTTCTTCCACTCCTCTGTTGCATTTTTCA
AGGGAACTTCATCACCGCAACTCTCCTGAGAGTCGCCATGTTTGTATGGG
TCGCAGATTAAAGGCACGAATGGACCGGATTGATTGTTTGCGGTATTGTT
GTTGGCTAAAACGGTAATGAATTGGTTCAGTAAATCGTTAACATTTGTGG
TTACTCCTTTCCCTGCTTCCTTGATCTCTTCGCCGAATGCCATGTCAAAA
CAAGGGAGAACTTCCCCCATTGCTGAATCGGCCATCGGGTCTTGAATCCA
TTCGTCCATTGCAATGCATGTATCTGACACTATGTTGTGAAAAACGAGAA
ACAGGCCGCACAAGAAAAATGTGAGTGTGATCACAATCCACCCAATGACC
ACGAACATATACACACAAGTTTTCATGCCAAGAATGGAAAACAAGAATCC
AAGAAATGCCAAGAGGAGCATGAAAACAGTAATAGTGATAAGAGCAGTGT
TGATTTGTTTGAGTAACTTTCTTATTTCATCTGTGATGTCTTGCGATTTG
ATACGAGGAAGGCTTCCTACGGAGTCGATTAACTTGTTGGCCTTGTCAAC
CTCGCCTTTAAGATCATCGGGTACAAACTTATTGTTCAGAACAACATTCT
TTGCAGATATAAGAAAATTTTGTATGCCTATAATATTATCGTAGATGCTT
AATCCTTGATTCACAATGTAATGTGATACATCATTTACACTGGCCAGGAA
CTTTCCTTCTCCAGTGAACATTAAAGCACATCCAGCAACAGTCGCAATGG
TGAAAAGTATGAGAAAGATGAGAGAACATGCATAAGCAAGTCGAGAATAG
CCGTAGGGCTTGTTGCGGTGGCAACAGCAGCAACAGATGCAAGCACAAAG
TAGAAAAATACCGAACAACATAAACCAGACTATAGCCATGAGGGCGAAAG
GAGCTGAACTATAACCAACAGAAGCAAGGTAATGTTTGCTTGTTATATCC
CATCCTCCTTTGTAATCTTTAAATTTATTCAAGGGATCAGGCCTCTCTGT
CTCTTCCTTAGCTAATATAATTGACGAATTTCTTGATTCAGTTTCTTCCA
TTTTTCGCTTCACCAACCTCATAATTCCATCGGATTGCAAATCAACATTC
TCATTTTTTCTACCATGAGAAACAGAAAACAATGTTGATAAAATAAGAAA
CAAAGCTGGTATAATATAAAATTGCTTCAATTTTTTAGGCCTATACATCA
TCGCTATTATCATTTTAGTTAACCTTTTTTTTTTTTGGTTCTGTTGTTTA
GTCTCTAGGTTCGATCTTTCCCTGGAGAAACAAAGAAGGGTTTAGGCATT
GCATTTCATTTAACGTGAACATTCTGTATGTTAAATGCATG
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