g.barbadense_cottongen_reftransV1_0097170, g.barbadense_cottongen_reftransV1_0097170 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.842e-35 Identity = 58/155 (37.42%), Postives = 72/155 (46.45%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPV+P CFLRA+ +G+M M+DQ GE+DDK+IAV ADDPEYK FTDI LPPHRL EI+RFFED KKNE+KEV V+D L A + ++ S+ Sbjct: 86 EPVVPMCFLRAKPIGVMQMLDQ-----------------------------GERDDKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFFEDY------------------------------------KKNEHKEVVVDDFLGAEEAKKVVKDSL 175 HSP 2 Score: 70.0922 bits (170), Expect = 3.842e-35 Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 649 VDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 VDRILYSSVVYPHNYGF+P+TLCED DP+D LV+MQ Sbjct: 50 VDRILYSSVVYPHNYGFVPKTLCEDGDPLDVLVLMQ 85 HSP 3 Score: 34.6538 bits (78), Expect = 3.842e-35 Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGM 551 V+EI +GSKVKYELDK TG+ Sbjct: 28 VIEIPRGSKVKYELDKDTGL 47
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=ppa PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.998e-20 Identity = 30/87 (34.48%), Postives = 41/87 (47.13%), Query Frame = 3 Query: 849 PGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFED 1109 P C ++A+ +G+M M+D GE+DDKIIAV A+D H DI +LPPH E++ FFED Sbjct: 83 PLCLVKAKVIGVMRMLDS-----------------------------GEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFED 140 HSP 2 Score: 55.4546 bits (132), Expect = 1.998e-20 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQVN 762 ++DR+LYSS YP NYGFIP++ C D DP+D LV+ QV Sbjct: 42 KLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVE 80 HSP 3 Score: 31.5722 bits (70), Expect = 1.998e-20 Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 V+EI +GS+ KYE+DK+ G++K+ Sbjct: 21 VIEIKRGSRAKYEVDKEYGILKL 43
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=ppa PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.998e-20 Identity = 30/87 (34.48%), Postives = 41/87 (47.13%), Query Frame = 3 Query: 849 PGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFED 1109 P C ++A+ +G+M M+D GE+DDKIIAV A+D H DI +LPPH E++ FFED Sbjct: 83 PLCLVKAKVIGVMRMLDS-----------------------------GEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFFED 140 HSP 2 Score: 55.4546 bits (132), Expect = 1.998e-20 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQVN 762 ++DR+LYSS YP NYGFIP++ C D DP+D LV+ QV Sbjct: 42 KLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVE 80 HSP 3 Score: 31.5722 bits (70), Expect = 1.998e-20 Identity = 12/23 (52.17%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 V+EI +GS+ KYE+DK+ G++K+ Sbjct: 21 VIEIKRGSRAKYEVDKEYGILKL 43
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_THEEB (Inorganic pyrophosphatase OS=Thermosynechococcus elongatus (strain BP-1) GN=ppa PE=3 SV=2) HSP 1 Score: 55.4546 bits (132), Expect = 4.169e-18 Identity = 23/35 (65.71%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 649 VDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIM 753 +DR+LYS+VVYP++YGFIP TL +D DP+D LV+M Sbjct: 42 LDRVLYSAVVYPYDYGFIPNTLADDGDPLDGLVMM 76 HSP 2 Score: 55.0694 bits (131), Expect = 4.169e-18 Identity = 30/89 (33.71%), Postives = 40/89 (44.94%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFF 1103 EP PGC + AR +G++ MID G++D+KI+ V DDP Y +KD+ PHRL EI FF Sbjct: 78 EPTFPGCVIPARPIGMLEMIDS-----------------------------GDRDEKILCVPVDDPRYAEVKSLKDIAPHRLEEIAEFF 137 HSP 3 Score: 24.6386 bits (52), Expect = 4.169e-18 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 474 PCSTVQVVEISKGSKVKYELDKK 542 P +VEI+ GS+ KYE DK+ Sbjct: 14 PGVVNVLVEIAGGSRNKYEFDKE 36
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_METTH (Inorganic pyrophosphatase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=ppa PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 8.006e-18 Identity = 35/100 (35.00%), Postives = 44/100 (44.00%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFE 1106 MD L M E P PGC + +R +GL+ MID G++DDKI+AV DP + DI D+P H L EI FFE Sbjct: 70 MDILVLMDE--PTFPGCIIESRPIGLLRMIDG-----------------------------GDQDDKILAVPVADPHFADVKDISDIPEHNLKEIANFFE 138 HSP 2 Score: 53.5286 bits (127), Expect = 8.006e-18 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 634 LNESQVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIM 753 L +DR+LYS+V YP YG IPRTL +D DPMD LV+M Sbjct: 37 LQAFALDRVLYSAVFYPAEYGIIPRTLYDDGDPMDILVLM 76 HSP 3 Score: 25.7942 bits (55), Expect = 8.006e-18 Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 3 Query: 462 GCWIPCSTVQVVEISKGSKVKYELDK 539 G +P VVEI KGS+ KYE K Sbjct: 10 GPSVPEVVYAVVEIPKGSRNKYEYHK 35
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_PYRFU (Inorganic pyrophosphatase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=ppa PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 5.472e-17 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 ++DR+LYS YP +YG IPRT ED+DP D +VIM+ Sbjct: 41 KLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMR 77 HSP 2 Score: 41.9726 bits (97), Expect = 5.472e-17 Identity = 29/90 (32.22%), Postives = 39/90 (43.33%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFE 1106 EPV P + AR +GL MID G+KD K++AV +DP +K + DI D+P L EI FF+ Sbjct: 78 EPVYPLTIIEARPIGLFKMIDS-----------------------------GDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFK 138 HSP 3 Score: 38.5058 bits (88), Expect = 5.472e-17 Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 462 GCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G +P ++EI KGS+ KYELDKKTG++K+ Sbjct: 10 GPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKL 42
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=ppa PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 9.338e-17 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 ++DR+LYS YP +YGFIPRTL +D DP+D LVIMQ Sbjct: 42 KLDRVLYSPFHYPLDYGFIPRTLYDDGDPLDILVIMQ 78 HSP 2 Score: 47.3654 bits (111), Expect = 9.338e-17 Identity = 27/91 (29.67%), Postives = 40/91 (43.96%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFED 1109 +P PGC + AR +GLM M+D ++DDK++AV +DP +K D+ D+P H L EI F + Sbjct: 79 DPTFPGCVIEARPIGLMKMLDD-----------------------------SDQDDKVLAVPTEDPRFKDVKDLDDVPKHLLDEIAHMFSE 140 HSP 3 Score: 28.1054 bits (61), Expect = 9.338e-17 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 474 PCSTVQVVEISKGSKVKYELDKKTGMIKV 560 P V+EI +GS+ KYE D++ G K+ Sbjct: 15 PDVVYAVIEIPRGSRNKYEYDEERGFFKL 43
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_THELN (Inorganic pyrophosphatase OS=Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) GN=ppa PE=3 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 1.089e-16 Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 ++DR+LYS YP +YG IP+T +D+DP D +VIM+ Sbjct: 41 KLDRVLYSPFHYPVDYGIIPQTWYDDDDPFDIMVIMR 77 HSP 2 Score: 44.669 bits (104), Expect = 1.089e-16 Identity = 28/90 (31.11%), Postives = 38/90 (42.22%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFE 1106 EP PG + AR +GL MID G+KD K++AV +DP + + DI D+P L EI FF+ Sbjct: 78 EPTYPGVLIEARPIGLFKMIDS-----------------------------GDKDYKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQ 138 HSP 3 Score: 39.6614 bits (91), Expect = 1.089e-16 Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 462 GCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G +P ++EI KGS+ KYELDKKTG+IK+ Sbjct: 10 GPEVPEVVYALIEIPKGSRNKYELDKKTGLIKL 42
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_SYNY3 (Inorganic pyrophosphatase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ppa PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 1.394e-16 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 634 LNESQVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIM 753 +N +DR+LYSSV YP++YGFIP TL +D DP+D +VIM Sbjct: 35 MNCFALDRVLYSSVQYPYDYGFIPNTLADDGDPLDGMVIM 74 HSP 2 Score: 51.2174 bits (121), Expect = 1.394e-16 Identity = 29/89 (32.58%), Postives = 39/89 (43.82%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFF 1103 +P PGC + AR +G++ MID G++D+KI+ V A DP Y + I DL HRL EI FF Sbjct: 76 QPTFPGCVITARPIGMLEMIDG-----------------------------GDRDEKILCVPAKDPRYTYVKSINDLAGHRLDEIAEFF 135 HSP 3 Score: 23.483 bits (49), Expect = 1.394e-16 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDK 539 ++EI GSK KYE DK Sbjct: 18 LIEIPAGSKNKYEFDK 33
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_THEAC (Inorganic pyrophosphatase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=ppa PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 2.175e-16 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 649 VDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 VDR+LYSSVVYP +YG IPRTL D DPMD +V++ Sbjct: 43 VDRVLYSSVVYPVDYGLIPRTLYYDGDPMDVMVLIS 78 HSP 2 Score: 50.447 bits (119), Expect = 2.175e-16 Identity = 28/98 (28.57%), Postives = 41/98 (41.84%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLK 1130 +P PG ++ R +G+M M+D QGE D+KI+AV DP + D+KD+ H L EI FF + + K Sbjct: 79 QPTFPGAIMKVRPIGMMKMVD-----------------------------QGETDNKILAVFDKDPNVSYIKDLKDVNAHLLDEIANFFSTYKILEKK 147 HSP 3 Score: 25.0238 bits (53), Expect = 2.175e-16 Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 3 Query: 474 PCSTVQVVEISKGSKVKYELDK 539 P +VEI +GS+VKYE+ K Sbjct: 15 PEEVYVIVEIPRGSRVKYEIAK 36
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2MYL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G149100 PE=4 SV=1) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 480/485 (98.97%), Postives = 481/485 (99.18%), Query Frame = -3 Query: 1762 PLHFANGGSSSRSYHAHIPKNTATIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3216 PLHFANGGSSSRSYHAHIPKNTATIFLSSSLL LSQSAHFPSLSVFPNIDSNRLRASAFNKGRKGGGGTTLFEM GSDEDNDGDEFIDFDDEFD DDEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSIT+EVAISHFVDGPNANFDMKNSSSDLSLESVSDEVDDHDDELVSDEFDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLER GSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES Sbjct: 19 PLHFANGGSSSRSYHAHIPKNTATIFLSSSLLPLSQSAHFPSLSVFPNIDSNRLRASAFNKGRKGGGGTTLFEMDGSDEDNDGDEFIDFDDEFDADDEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITEEVAISHFVDGPNANFDMKNSSSDLSLESVSDEVDDHDDELVSDEFDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERVGSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 503
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0B0NZJ6_GOSAR (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F383_22655 PE=4 SV=1) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 456/483 (94.41%), Postives = 462/483 (95.65%), Query Frame = -3 Query: 1762 HFANGGSSSRSYHAHIPKNTATIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3210 HFANGGSSSRS H I +NTATIFL+SSLL LSQSAHFPSLSVFPNID NRLRASAFNKGRKG GGTTLFEM GSDED+DGDEFIDFDDEFD D EDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKK DQQNK+AESV SGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQ FSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDG N NFDMKNSSSD+SLESVSDEVD+HDDELVSDE DDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAAD IA TPLERIRALEQKLLARGKQQRVPKEQKGQKLER SNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTG FSKYGLKTPSNSKEES Sbjct: 21 HFANGGSSSRSSHVRISENTATIFLASSLLPLSQSAHFPSLSVFPNIDFNRLRASAFNKGRKGSGGTTLFEMDGSDEDDDGDEFIDFDDEFDADGEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKDDQQNKEAESVLSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQNFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGLNPNFDMKNSSSDISLESVSDEVDNHDDELVSDELDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADSIASTPLERIRALEQKLLARGKQQRVPKEQKGQKLERVRSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGVFSKYGLKTPSNSKEES 503
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A061E6U3_THECC (RNA-binding family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_010219 PE=4 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 1.092e-130 Identity = 303/496 (61.09%), Postives = 336/496 (67.74%), Query Frame = -3 Query: 1762 FTPLHFANGGSSSRSYHAHIPKNTA---------TIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3222 FT LH +G ++ H+ KNTA IF SS L Q H LSVFPN DSN+LRASAFNKG+ GG L+EM SD + + + F D DD+ + MFLP GKMKKWLENKPRGFGEGKVYDTSIE+KLLEEIEQSRQAQ VNVNNLKNNPVK GSKK AE VPSG+RVRV NLPKKKNIHRDLKAAF+GVSGIINISPAVSGNKKTKDPVCKGFAFV+FK EVDA RFVQ FSGHN+ FGRIQKQIKCEM+NS+S +PAHEEL D SIT EVA+ D P+ +FDM DDQD+EFD VE GEGR+NLN ISE+ S D AAD ++ LERIRALEQKL+ARGKQQ VPKEQKGQKLER +KK +AK Q+K KEQ+VQKLDIPGSAKRLKIKEKA LTG FSKYGLKT KEES Sbjct: 18 FTSLHHGSGSAN----HSIKQKNTAFSLSFPFRRAIFASSLPPLSQQ-THLTFLSVFPNKDSNKLRASAFNKGKNGGTT--LYEMDRSDGEEEDEFFDFDDGLDGGDDDCDE-GMFLPFGKMKKWLENKPRGFGEGKVYDTSIEDKLLEEIEQSRQAQVVNVNNLKNNPVKSGSKK------VAEVVPSGVRVRVVNLPKKKNIHRDLKAAFNGVSGIINISPAVSGNKKTKDPVCKGFAFVDFKREVDATRFVQNFSGHNIMFGRIQKQIKCEMMNSVSQNPAHEELSDKDSITPEVAVPGLGDCPDTDFDMN-------------------------------ISCSDLSLDDQDEEFDRVEQGEGRDNLNVISESGPSNGD-------ERAADSMSSNRLERIRALEQKLIARGKQQGVPKEQKGQKLERI-RGIEKKPLAKGKQKKDPKEQQVQKLDIPGSAKRLKIKEKALLTGVFSKYGLKTALTWKEES 460
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2PC93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G149200 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.119e-78 Identity = 90/161 (55.90%), Postives = 92/161 (57.14%), Query Frame = 3 Query: 819 CHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 C ++ EPVLPGCFLRARALGLMPMIDQ GEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFED KKNENKEVAVNDILPVNTAIEAIQYSM Sbjct: 98 CLVIMQEPVLPGCFLRARALGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDILPVNTAIEAIQYSM 193 HSP 2 Score: 81.2629 bits (199), Expect = 2.119e-78 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ Sbjct: 67 KVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 103 HSP 3 Score: 80.1073 bits (196), Expect = 2.119e-78 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 232 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIGT 342 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG+ Sbjct: 1 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIGS 37 HSP 4 Score: 53.1434 bits (126), Expect = 2.119e-78 Identity = 33/64 (51.56%), Postives = 33/64 (51.56%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 GSEAPTVFNCV VEISKGSKVKYELDKKTGMIKV Sbjct: 36 GSEAPTVFNCV-------------------------------VEISKGSKVKYELDKKTGMIKV 68
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2PSY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G150500 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.825e-66 Identity = 83/174 (47.70%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 819 CHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 C ++ EPVLPGCFLRARALGLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIKDLPPHRLTEIRRFFED KKNENKEVAV+ LP A+EA+QYSM YA + + R Sbjct: 111 CLVIMQEPVLPGCFLRARALGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKDLPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVDKFLPATAAVEAVQYSMDLYAEYIMQTLRR 219 HSP 2 Score: 79.337 bits (194), Expect = 3.825e-66 Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+DCLVIMQ Sbjct: 80 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDCLVIMQ 116 HSP 3 Score: 62.3882 bits (150), Expect = 3.825e-66 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 226 KRMSESTEAPR--PRLNERILSAMSKRSVAAHPWHDLEIGTTY-----CNICCVQDL 375 K ++ E PR PRLNERILS+MS+RSVAAHPWHDLEIG CNI V ++ Sbjct: 6 KNEAKVVETPRKPPRLNERILSSMSRRSVAAHPWHDLEIGPGAPAIFNCNILKVVEI 62 HSP 4 Score: 47.3654 bits (111), Expect = 3.825e-66 Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 3 Query: 477 CSTVQVVEISKGSKVKYELDKKTGMIKV 560 C+ ++VVEI KGSKVKYELDKKTG+IKV Sbjct: 54 CNILKVVEIPKGSKVKYELDKKTGLIKV 81
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: V4L668_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028951mg PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.027e-65 Identity = 79/155 (50.97%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRL+EIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 118 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 207 HSP 2 Score: 76.6406 bits (187), Expect = 3.027e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 81 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 117 HSP 3 Score: 63.5438 bits (153), Expect = 3.027e-65 Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1 Query: 208 SGKNKIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 +++ + SE + P PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 7 KNQSEKENQSEKLQRPTPRLNERILSSLSRRSVAAHPWHDLEIG 50 HSP 4 Score: 45.0542 bits (105), Expect = 3.027e-65 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 49 IGPGAPVIFNVVIEISKGSKVKYELDKKTGLIKV 82
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: V4U1L6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024641mg PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.211e-65 Identity = 80/155 (51.61%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENK+VAVN+ LP +TA+EAIQYSM Sbjct: 148 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKKVAVNEFLPTSTAVEAIQYSM 237 HSP 2 Score: 75.0998 bits (183), Expect = 3.211e-65 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+D LV+MQ Sbjct: 111 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 147 HSP 3 Score: 62.003 bits (149), Expect = 3.211e-65 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 202 FYSGKNKIKRMSEST---EAPRPRLNERILSAMSKRSVAAHPWHDLEIGTTYCNI--CCVQDLK 378 F S + I +MSE P+LNERILS++S+RSVAAHPWHDLEIG N+ C V+ K Sbjct: 32 FISDSSSIFKMSEEAANVSRSAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPNVFNCVVEITK 95 HSP 4 Score: 44.669 bits (104), Expect = 3.211e-65 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 90 VVEITKGSKVKYELDKKTGLIKV 112
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: U5DH94_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00064p00191050 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.484e-65 Identity = 86/178 (48.31%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 MD L M E PVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+TDIK+LPPHRL EIRRFFED KKNENKEVAVND LP A EAIQYSM YA+ + + R Sbjct: 106 MDVLVLMQE--PVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYTDIKELPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNDFLPSTAAYEAIQYSMNLYATYILQSLRR 216 HSP 2 Score: 77.0258 bits (188), Expect = 3.484e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDPMD LV+MQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 113 HSP 3 Score: 63.1586 bits (152), Expect = 3.484e-65 Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 Query: 208 SGKNKIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 KN + M ES + P PRLNERILS++S+RSVAAHPWHDL+IG Sbjct: 4 GSKNGLSAM-ESEKRPTPRLNERILSSLSRRSVAAHPWHDLDIG 46 HSP 4 Score: 45.0542 bits (105), Expect = 3.484e-65 Identity = 23/34 (67.65%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI KGSKVKYELDKKTG+IKV Sbjct: 45 IGPGAPSVVNCVVEIGKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D3AS94_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.544e-65 Identity = 80/155 (51.61%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 112 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 201 HSP 2 Score: 76.6406 bits (187), Expect = 3.544e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 75 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 111 HSP 3 Score: 62.3882 bits (150), Expect = 3.544e-65 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 235 SESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 S + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 10 SGKLQKPTPRLNERILSSLSKRSVAAHPWHDLEIG 44 HSP 4 Score: 45.4394 bits (106), Expect = 3.544e-65 Identity = 24/34 (70.59%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEISKGSKVKYELDKKTG+IKV Sbjct: 43 IGPGAPVIFNVVVEISKGSKVKYELDKKTGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: M4CWF4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra008551 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.544e-65 Identity = 80/155 (51.61%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 112 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 201 HSP 2 Score: 76.6406 bits (187), Expect = 3.544e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 75 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 111 HSP 3 Score: 62.3882 bits (150), Expect = 3.544e-65 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 235 SESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 S + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 10 SGKLQKPTPRLNERILSSLSKRSVAAHPWHDLEIG 44 HSP 4 Score: 45.4394 bits (106), Expect = 3.544e-65 Identity = 24/34 (70.59%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEISKGSKVKYELDKKTG+IKV Sbjct: 43 IGPGAPVIFNVVVEISKGSKVKYELDKKTGLIKV 76 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097170 ID=g.barbadense_cottongen_reftransV1_0097170; Name=g.barbadense_cottongen_reftransV1_0097170; organism=Gossypium barbadense; type=contig; length=3431bpback to top |