g.barbadense_cottongen_reftransV1_0097170, g.barbadense_cottongen_reftransV1_0097170 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR5_ARATH (Soluble inorganic pyrophosphatase 5 OS=Arabidopsis thaliana GN=PPA5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.738e-64 Identity = 77/155 (49.68%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH T+I +LPPHRL+EIRRFFED KKNENKEVAVND L AIEAIQYSM Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLQPGPAIEAIQYSM 203 HSP 2 Score: 75.485 bits (184), Expect = 3.738e-64 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGF+PRTLCEDNDP+D LVIMQ Sbjct: 77 KVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 113 HSP 3 Score: 62.3882 bits (150), Expect = 3.738e-64 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 220 KIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 K + + + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 7 KTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIG 46 HSP 4 Score: 45.0542 bits (105), Expect = 3.738e-64 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 45 IGPGAPVIFNVVIEISKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.986e-64 Identity = 81/165 (49.09%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+TDIK LPPHRL EIRRFFED KKNENK+VAV+D LP N+A+ AIQYSM Sbjct: 101 MDVLVLMQE--PVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFEDY------------------------------------KKNENKDVAVDDFLPPNSAVNAIQYSM 198 HSP 2 Score: 73.9442 bits (180), Expect = 4.986e-64 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYP NYGFIPRTLCEDNDPMD LV+MQ Sbjct: 72 KVDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQ 108 HSP 3 Score: 57.7658 bits (138), Expect = 4.986e-64 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 259 PRLNERILSAMSKRSVAAHPWHDLEIG 339 PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 15 PRLNERILSSISRRSVAAHPWHDLEIG 41 HSP 4 Score: 45.4394 bits (106), Expect = 4.986e-64 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 40 IGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKV 73
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR4_ARATH (Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana GN=PPA4 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.250e-60 Identity = 71/155 (45.81%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPV+PGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DI +LPPHR+ EIRRFFED KKNENKEVAVND LP A +A+Q+SM Sbjct: 114 EPVIPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFEDY------------------------------------KKNENKEVAVNDFLPATAAYDAVQHSM 203 HSP 2 Score: 73.9442 bits (180), Expect = 4.250e-60 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCED+DP+D LVIMQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDSDPIDVLVIMQ 113 HSP 3 Score: 55.4546 bits (132), Expect = 4.250e-60 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 259 PRLNERILSAMSKRSVAAHPWHDLEIG 339 P LNERILS+MS RSVAAHPWHDLEIG Sbjct: 20 PTLNERILSSMSHRSVAAHPWHDLEIG 46 HSP 4 Score: 43.1282 bits (100), Expect = 4.250e-60 Identity = 27/64 (42.19%), Postives = 29/64 (45.31%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G EAP +FNCV VEI KGSKVKYELDK TG+IKV Sbjct: 46 GPEAPIIFNCV-------------------------------VEIGKGSKVKYELDKTTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.767e-54 Identity = 77/178 (43.26%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 MD L M E PVL G FLRARA+GLMPMIDQ GEKDDKIIAVCADDPE++H+ DIK+LPPHRL EIRRFFED KKNENK+V V LP AI+AI+ SM YA+ +K R Sbjct: 108 MDVLVLMQE--PVLTGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDY------------------------------------KKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218 HSP 2 Score: 73.559 bits (179), Expect = 1.767e-54 Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSS+VYPHNYGFIPRT+CED+DPMD LV+MQ Sbjct: 79 KVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQ 115 HSP 3 Score: 45.8246 bits (107), Expect = 1.767e-54 Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 253 PRPRLNERILSAMSKRSVAAHPWHDLEIG 339 P LNER +A + RS AAHPWHDLEIG Sbjct: 20 PNVTLNERNFAAFTHRSAAAHPWHDLEIG 48 HSP 4 Score: 45.4394 bits (106), Expect = 1.767e-54 Identity = 28/64 (43.75%), Postives = 30/64 (46.88%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G EAPTVFNCV VEISKG KVKYELDK +G+IKV Sbjct: 48 GPEAPTVFNCV-------------------------------VEISKGGKVKYELDKNSGLIKV 80
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.494e-54 Identity = 71/165 (43.03%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PV+PG FLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H++ L P RL EI+R ED KKNENKEVAV+ LP TA EAIQYSM Sbjct: 107 MDVLVLMQE--PVIPGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYSTSVSLLP-RLQEIKR-LEDY------------------------------------KKNENKEVAVDAFLPATTAREAIQYSM 202 HSP 2 Score: 77.411 bits (189), Expect = 2.494e-54 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDPMD LV+MQ Sbjct: 78 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 114 HSP 3 Score: 55.4546 bits (132), Expect = 2.494e-54 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 238 ESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 + T P P+LNERILS++S+R AHPWHDLEIG Sbjct: 14 QPTSRPAPKLNERILSSLSRRGGGAHPWHDLEIG 47 HSP 4 Score: 45.4394 bits (106), Expect = 2.494e-54 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI+KGSKVKYELDKKTG+IKV Sbjct: 46 IGPGAPAVFNVVVEITKGSKVKYELDKKTGLIKV 79
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.081e-54 Identity = 79/155 (50.97%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRL+EIRRFFED KKNENKEVAVND LP +A+EAIQYSM Sbjct: 110 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLPSESAVEAIQYSM 199 HSP 2 Score: 75.8702 bits (185), Expect = 4.081e-54 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGF+PRTLCEDNDP+D LVIMQ Sbjct: 73 KVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 109 HSP 3 Score: 44.669 bits (104), Expect = 4.081e-54 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 52 VVEITKGSKVKYELDKKTGLIKV 74 HSP 4 Score: 61.6178 bits (148), Expect = 4.867e-9 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 1 Query: 232 MSEST------EAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 MSE T + P PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 1 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIG 42
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR3_ARATH (Soluble inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=PPA3 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 7.640e-53 Identity = 79/155 (50.97%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEYKHFTDIK L PHRL EIRRFFED KKNENK+VAVND LP +A EAIQYSM Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFEDY------------------------------------KKNENKKVAVNDFLPSESAHEAIQYSM 203 HSP 2 Score: 76.2554 bits (186), Expect = 7.640e-53 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LV+MQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 113 HSP 3 Score: 44.669 bits (104), Expect = 7.640e-53 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 56 VVEITKGSKVKYELDKKTGLIKV 78 HSP 4 Score: 61.6178 bits (148), Expect = 4.267e-9 Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 226 KRMSESTEAPRP--RLNERILSAMSKRSVAAHPWHDLEIG 339 + ES+++PRP +LNERILS +S+RSVAAHPWHDLEIG Sbjct: 7 EETQESSQSPRPVPKLNERILSTLSRRSVAAHPWHDLEIG 46
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.764e-50 Identity = 76/165 (46.06%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PV+PG FLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DI +L PHRL EI+RFFED KKNENKEVAV+ LP TA EAIQYSM Sbjct: 104 MDVLVLMQE--PVVPGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDY------------------------------------KKNENKEVAVDAFLPATTAREAIQYSM 201 HSP 2 Score: 77.0258 bits (188), Expect = 2.764e-50 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGF+PRTLCEDNDPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQ 111 HSP 3 Score: 45.0542 bits (105), Expect = 2.764e-50 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 54 VVEITKGSKVKYELDKKTGLIKV 76 HSP 4 Score: 60.4622 bits (145), Expect = 1.167e-8 Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 229 RMSESTEAPR--PRLNERILSAMSKRSVAAHPWHDLEIG 339 + + S E P+ P+LNERILS++S+RSVAAHPWHDLEIG Sbjct: 6 KTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIG 44
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.050e-49 Identity = 78/165 (47.27%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E V+PGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+HF DIK++PPHRL EIRRFFED KKNENKEVAVN+ LP AI AI+YSM Sbjct: 104 MDVLVLMQE--QVVPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNEFLPAEDAINAIKYSM 201 HSP 2 Score: 74.3294 bits (181), Expect = 8.050e-49 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCED DPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQ 111 HSP 3 Score: 40.4318 bits (93), Expect = 8.050e-49 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI +GSKVKYELDK TG+IKV Sbjct: 43 IGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.050e-49 Identity = 78/165 (47.27%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E V+PGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+HF DIK++PPHRL EIRRFFED KKNENKEVAVN+ LP AI AI+YSM Sbjct: 104 MDVLVLMQE--QVVPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNEFLPAEDAINAIKYSM 201 HSP 2 Score: 74.3294 bits (181), Expect = 8.050e-49 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCED DPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQ 111 HSP 3 Score: 40.4318 bits (93), Expect = 8.050e-49 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI +GSKVKYELDK TG+IKV Sbjct: 43 IGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2TAJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G424300 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.575e-62 Identity = 81/168 (48.21%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 EPVLPGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DIK+LPPHRL EIRRFFED KKNENKEVAVND LP +TA EAIQ+SM YA + E R Sbjct: 114 EPVLPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY------------------------------------KKNENKEVAVNDFLPASTAYEAIQHSMNLYADYIVESLRR 216 HSP 2 Score: 75.0998 bits (183), Expect = 1.575e-62 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+D L+IMQ Sbjct: 77 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQ 113 HSP 3 Score: 60.4622 bits (145), Expect = 1.575e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 229 RMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 + S+S AP P LNERILS+M++RSVAAHPWHDLEIG Sbjct: 10 KSSDSHCAPHPPLNERILSSMTRRSVAAHPWHDLEIG 46 HSP 4 Score: 45.0542 bits (105), Expect = 1.575e-62 Identity = 28/64 (43.75%), Postives = 30/64 (46.88%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G APTVFNCV +EI KGSKVKYELDKKTG+IKV Sbjct: 46 GPGAPTVFNCV-------------------------------IEIGKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: I3STR7_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.740e-62 Identity = 76/155 (49.03%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEYKH+TD K+L PHRL EI RFFED KKNENKEVAVN+ LP +TA+EAIQ+SM Sbjct: 110 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHYTDFKELQPHRLMEIERFFEDY------------------------------------KKNENKEVAVNEFLPPSTAVEAIQHSM 199 HSP 2 Score: 75.8702 bits (185), Expect = 1.740e-62 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LV+MQ Sbjct: 73 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 109 HSP 3 Score: 62.3882 bits (150), Expect = 1.740e-62 Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 253 PRPRLNERILSAMSKRSVAAHPWHDLEIGTTYCNI--CCVQDLK 378 P PRLNERILS++S+RSVAAHPWHDLEIG NI C V+ K Sbjct: 14 PTPRLNERILSSLSRRSVAAHPWHDLEIGPGAPNIFNCVVEITK 57 HSP 4 Score: 45.8246 bits (107), Expect = 1.740e-62 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTGMIKV Sbjct: 52 VVEITKGSKVKYELDKKTGMIKV 74
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A059DEM8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01238 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.094e-62 Identity = 81/168 (48.21%), Postives = 88/168 (52.38%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 EPVLPGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DIKDLPPHRL EIRRFFED KKNENKEVAVND LP + A EAIQ+SM YA + E R Sbjct: 121 EPVLPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDY------------------------------------KKNENKEVAVNDFLPASDAFEAIQHSMNLYADYIVESLRR 223 HSP 2 Score: 75.0998 bits (183), Expect = 2.094e-62 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+D L+IMQ Sbjct: 84 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQ 120 HSP 3 Score: 58.151 bits (139), Expect = 2.094e-62 Identity = 24/38 (63.16%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 226 KRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 +++ E++ + P LNERILS+M++RSVAAHPWHDLEIG Sbjct: 16 QKVYENSHSSHPPLNERILSSMTRRSVAAHPWHDLEIG 53 HSP 4 Score: 46.595 bits (109), Expect = 2.094e-62 Identity = 29/64 (45.31%), Postives = 31/64 (48.44%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G APTVFNCV +EISKGSKVKYELDKKTG+IKV Sbjct: 53 GPGAPTVFNCV-------------------------------IEISKGSKVKYELDKKTGLIKV 85
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2TGI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G424300 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.306e-62 Identity = 77/155 (49.68%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DIK+LPPHRL EIRRFFED KKNENKEVAVND LP +TA EAIQ+SM Sbjct: 114 EPVLPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY------------------------------------KKNENKEVAVNDFLPASTAYEAIQHSM 203 HSP 2 Score: 75.0998 bits (183), Expect = 2.306e-62 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+D L+IMQ Sbjct: 77 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQ 113 HSP 3 Score: 60.4622 bits (145), Expect = 2.306e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 229 RMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 + S+S AP P LNERILS+M++RSVAAHPWHDLEIG Sbjct: 10 KSSDSHCAPHPPLNERILSSMTRRSVAAHPWHDLEIG 46 HSP 4 Score: 44.669 bits (104), Expect = 2.306e-62 Identity = 28/64 (43.75%), Postives = 30/64 (46.88%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G APTVFNCV +EI KGSKVKYELDKKTG+IKV Sbjct: 46 GPGAPTVFNCV-------------------------------IEIGKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: W9RVW2_9ROSA (Soluble inorganic pyrophosphatase OS=Morus notabilis GN=L484_019610 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.975e-62 Identity = 82/165 (49.70%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PVLPGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEYKH+ DIK+L PHRL+EIRRFFED KKNENKEVAVND LP +TA EAIQYSM Sbjct: 120 MDVLVLMQE--PVLPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHYNDIKELAPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLPSSTATEAIQYSM 217 HSP 2 Score: 77.411 bits (189), Expect = 2.975e-62 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDPMD LV+MQ Sbjct: 91 KVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 127 HSP 3 Score: 54.299 bits (129), Expect = 2.975e-62 Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 265 LNERILSAMSKRSVAAHPWHDLEIGTTYCNI--CCVQDLK 378 LNERILS++S+RSVAAHPWHDLEIG + I C V+ K Sbjct: 36 LNERILSSLSRRSVAAHPWHDLEIGPSAPQIFNCVVEITK 75 HSP 4 Score: 44.669 bits (104), Expect = 2.975e-62 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 70 VVEITKGSKVKYELDKKTGLIKV 92 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097170 ID=g.barbadense_cottongen_reftransV1_0097170; Name=g.barbadense_cottongen_reftransV1_0097170; organism=Gossypium barbadense; type=contig; length=3431bpback to top |