g.barbadense_cottongen_reftransV1_0097169, g.barbadense_cottongen_reftransV1_0097169 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.019e-78 Identity = 179/264 (67.80%), Postives = 201/264 (76.14%), Query Frame = -1 Query: 3 FLQGC-KPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXS--KRP-YSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEE----VLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVIS-DEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GC +PVERM+I GGSAT SPCSSY PSP ASYNPSP SS+F SPASSS+ +GD SL PWLK+LS+ SSS++SS + P Y YI GGSISAPVTPPLSSPTARTPRM DW+ + +SF SSTPPSP RQI+PD EWFSG+Q S P SPTFSLVS NPFGFKEE GGGSRMWTPGQSGTCSPAI G+D TADVPMSE ++ EFAFGSN GLVK WEGERIHE+ GSDDLELTLG+S T Sbjct: 70 YRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSGDGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQLN---------NSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFAFGSNTNGLVKAWEGERIHEESGSDDLELTLGNSST 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR2_ORYSJ (Protein BZR1 homolog 2 OS=Oryza sativa subsp. japonica GN=BZR2 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.807e-62 Identity = 159/268 (59.33%), Postives = 193/268 (72.01%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNG-----DVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFG-FKEEVLAGGG-SRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSN------ATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +G KP ERM+++G S + SPCSSY PSPRASYN SP SSSFPS ASS ++ +PN D N + PWLK LS++ SS + P IHGGSISAPVTPPLSSPTARTPRMK DW++ +V P W+ + +STPPSPGR ++PDP W +G+Q + P+SPTFSLVSSNPF FK+ +L G SRM TPGQSGTCSPAI + H D+ M + +SDEFAFGS+ A GLV+ WEGERIHED GSDDLELTLGSS+T Sbjct: 95 YRKGYKPPERMEVIGCSVSPSPCSSYQPSPRASYNASPTSSSFPSGASSPFLPHPNNMANGVDGNPILPWLKTLSNSPSSKKHPQLPPLLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWTGSNSPCVVNSTPPSPGRTMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVFKDAILVGNNSSRMCTPGQSGTCSPAIPGMAPH-PDIHMMDAVSDEFAFGSSTNGGHQAAGLVRAWEGERIHEDSGSDDLELTLGSSRT 361
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR3_ORYSJ (Protein BZR1 homolog 3 OS=Oryza sativa subsp. japonica GN=BZR3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.099e-61 Identity = 156/272 (57.35%), Postives = 190/272 (69.85%), Query Frame = -1 Query: 3 FLQGCKP--VERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDV------NSLFPWLKNLXXXXXXXXXSKRP---YSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNAT------GLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP ER D +G SA+ SPCSSY PSPRASYNPSPASSSFPS SSS++ + +SL PWLK L +SS ASSSK P + Y +GGSISAPVTPP SSPT RTPR++ DWE+ SV P W++ ++ LP+STPPSPG +I PDP W SG Q + P+SPT++LVS NPFG +E +A SR+ TPGQSGTCSP + H DV M + D+FAFGS++ GLVK WEGERIHE+C SD+LELTLGSSKT Sbjct: 82 YRKGCKPPQAERPDPIGRSASPSPCSSYQPSPRASYNPSPASSSFPSSGSSSHITIGGNSLIGGVEGSSLIPWLKTLPLSSSYASSSKFPQLHHLYFNGGSISAPVTPPSSSPT-RTPRLRTDWENASVQPPWASANYTSLPNSTPPSPGHKIAPDPAWLSGFQISSAGPSSPTYNLVSPNPFGIFKEAIA-STSRVCTPGQSGTCSPVMGGMPAH-HDVQMVDGAPDDFAFGSSSNGNNESPGLVKAWEGERIHEECASDELELTLGSSKT 350
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.413e-55 Identity = 130/259 (50.19%), Postives = 156/259 (60.23%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGG-GSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSN---ATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP++RMD++ GS + SPCSSY ++P + + PS +S NP GD NSL PWLKNL SS S SK P + HG SISAPVTPPL AR+P DQ +PD W SG+QTP S P+SPTFSLVS NPF KE G S MWTPGQSG CSPAI AG D +DVPM++ ++ EFAFG N A G+VKPWEGERIH +C SDDLELTLG+S+T Sbjct: 70 YRKGCKPMDRMDLMNGSTSASPCSSYQ------HSPRASYNPSPSSSSFPSPTNPFGDANSLIPWLKNL----SSNSPSKLP--FFHGNSISAPVTPPL----ARSPT-----RDQVT------------------------IPDSGWLSGMQTPQSGPSSPTFSLVSRNPFFDKEAFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMAANGMVKPWEGERIHGECVSDDLELTLGNSRT 283
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR4_ORYSJ (Protein BZR1 homolog 4 OS=Oryza sativa subsp. japonica GN=BZR4 PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.715e-33 Identity = 128/289 (44.29%), Postives = 152/289 (52.60%), Query Frame = -1 Query: 3 FLQGCKP--VERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXS---KRP--YSYIHGGSISAPVTPPLSSPTARTPRMKND-WEDQ------SVLPGWSA-------QQHSFLPSSTPPSPGRQIVPDPE----------WFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNA---TGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP E D +G S + SPCSSY PSPR + + + SS G+ +SL PWLK LSSA K P YSY GGSISAPVTPP SP RTPR+K WE+ SVLP W+ S LP+STPPSP R++ W +G Q + P+SPT+SLV+ P F A G S SG CSP +A G DV M++ EFAFG TGLVK WEGERIHE+CGSDDLELTLGSS T Sbjct: 73 YRKGCKPPASELADQLGRSPSASPCSSYQPSPRGTSSFPSSGSSSQIT----LGGGGGGEGSSLIPWLKTLSSAGVGIGGGSSSKFPAHYSYFGGGSISAPVTPPSGSP-PRTPRLKTAAWEEYHHHHAGSVLPPWATVGASYAYAASSSLPNSTPPSPRRKVAAAAAAAGGGNDAAAWLAGFQISSAGPSSPTYSLVAPPPNPFGAAAAAAGSSSRV---MSGACSP-VAGG-----DVQMADAARREFAFGGEGGKMTGLVKAWEGERIHEECGSDDLELTLGSSMT 347
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: B9I1R5_POPTR (Brassinosteroid signaling positive regulator-related family protein OS=Populus trichocarpa GN=POPTR_0011s10810g PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.054e-109 Identity = 201/255 (78.82%), Postives = 217/255 (85.10%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP E MDI+GGSAT SPCSSY PSP ASYNPSP SSSFPSP SSSY N N D NSL PWLKNLSSASSS K P+ YIHGGSISAPVTPPLSSPTARTPR+K WEDQ + PGW Q +LPSSTPPSPGRQIVPDP WF+G++ P PTSPTFSLV+SNPFGFKEE LAGGGSRMWTPGQSGTCSPAIAAGSD TAD+PM+EVISDEFAF NATGLVKPWEGERIHE+CGSDDLELTLG+S+T Sbjct: 70 YRKGCKPAEHMDIIGGSATASPCSSYLPSPCASYNPSPGSSSFPSPVSSSYAANANLDDNSLLPWLKNLSSASSS----KLPHLYIHGGSISAPVTPPLSSPTARTPRIKTGWEDQPIHPGWCGQH--YLPSSTPPSPGRQIVPDPGWFAGIRLPQGGPTSPTFSLVASNPFGFKEEALAGGGSRMWTPGQSGTCSPAIAAGSDQTADIPMAEVISDEFAFRCNATGLVKPWEGERIHEECGSDDLELTLGNSRT 318
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A9PB38_POPTR (Brassinosteroid signaling positive regulator-related family protein OS=Populus trichocarpa GN=POPTR_0001s39520g PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 9.989e-109 Identity = 210/259 (81.08%), Postives = 225/259 (86.87%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVL----AGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 F +GCKPVERMDI+G SAT SPCSSYHPSP ASYNPSP SSSFPSPASSSY N N D NSL PWLKNLSSASSSASSSK P+ YIHGGSISAPVTPPLSSPTART R+K DWEDQS+ PGW Q +SFLPSSTPPSPGRQIVPDPEWF G++ P PTSPTFSLV+SNPFGFKEE + GGSRMWTPGQSGTCSPAIAAGSDHTAD+PM+E ISDEFAF NATGLVKPWEGERIHE+CGSDDLELTLG+S+T Sbjct: 70 FRKGCKPVERMDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSYAANANMDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTARIKADWEDQSIRPGWGGQHYSFLPSSTPPSPGRQIVPDPEWFRGIRIPQGGPTSPTFSLVASNPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEFAFRCNATGLVKPWEGERIHEECGSDDLELTLGNSRT 327
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: F6H1V6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00870 PE=4 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 1.161e-107 Identity = 213/256 (83.20%), Postives = 228/256 (89.06%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLA-GGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDIVGGSA+ SPCSSYHPSP ASYNPSPASSSFPSPASSSY NPN D NSL PWLKNLSSASSSASSSK P+ YIH GSISAPVTPPLSSPTARTPR+K DW+DQS PGW+ +SFLPSSTPPSPGRQI+PD EWF+G++ P PTSPTFSLVSSNPFGFKEE+LA GSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFG N GLVKPWEGERIHE+CGSDDLELTLGSS+T Sbjct: 1139 YRKGCKPVERMDIVGGSASASPCSSYHPSPCASYNPSPASSSFPSPASSSYAANPNADGNSLIPWLKNLSSASSSASSSKLPHLYIHSGSISAPVTPPLSSPTARTPRIKTDWDDQSARPGWAGAHYSFLPSSTPPSPGRQILPDSEWFAGIRIPQGGPTSPTFSLVSSNPFGFKEEMLASASGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGCNTVGLVKPWEGERIHEECGSDDLELTLGSSRT 1394
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: G7IR05_MEDTR (Brassinazole-resistant 1 protein OS=Medicago truncatula GN=MTR_2g075410 PE=4 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 6.943e-106 Identity = 196/255 (76.86%), Postives = 218/255 (85.49%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP ER+D++GGS SPCSSYH SP ASYNPSP SSSFPSP SS + VNPNGD NSL PWLKNLSS SSSASSSK P YIH GSISAPVTPPLSSPTAR+P+ K DWEDQS PGW QQ+SF PSSTPPSPGRQ++ DP+WF+G++ PHS TSPTFSLV++NPFGF+EEV G SRMWTPGQSGTCSPA+AAGSDH AD+PMSE ISDEFAFGS+A GLVKPWEGERIHED GSDDLELTLG+SKT Sbjct: 70 YRKGCKPAERIDVIGGSTMGSPCSSYHVSPCASYNPSPGSSSFPSPRSS-HAVNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIHTGSISAPVTPPLSSPTARSPQRKADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVL-DPDWFAGIRMPHSGQTSPTFSLVATNPFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLVKPWEGERIHEDSGSDDLELTLGTSKT 322
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A0A0KXL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083490 PE=4 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.742e-105 Identity = 204/255 (80.00%), Postives = 226/255 (88.63%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP+ERMD+VGGSA SP +S+ PSP AS+NPSP SSSFPSPASSSY+ NPN D +SL PWLKNLS++SSSASSSK P YIHGGSISAPVTPPLSSPTARTPR+K DWEDQSVLPGWSAQ +S PSSTPPSPGRQIVP PEWF+GL+ P P SPTFSLVS+NPFGFKE + GGGSRMWTPGQSGTCSPAIAAGSDHTAD+PMSEVISDEFAFGSNA G+VKPWEGE IHE+CGSDDLELTLG+S+T Sbjct: 70 YRKGCKPIERMDVVGGSAAASPYTSHQPSPCASFNPSPGSSSFPSPASSSYIGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQIVPTPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAITGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGEIIHEECGSDDLELTLGNSRT 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: U7DZC8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0439s00200g PE=4 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 6.790e-103 Identity = 202/249 (81.12%), Postives = 216/249 (86.75%), Query Frame = -1 Query: 3 MDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVL----AGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 737 MDI+G SAT SPCSSYHPSP ASYNPSP SSSFPSPASSSY N N D NSL PWLKNLSSASSSASSSK P+ YIHGGSISAPVTPPLSSPTART R+K DWEDQS+ PGW Q +SFLPSSTPPSPGRQIVPDPEWF G++ P PTSPTFSLV+SNPFGFKEE + GGSRMWTPGQSGTCSPAIAAGSDHTAD+PM+E ISDEFAF NATGLVKPWEGERIHE+CGSDDLELTLG+S+T Sbjct: 1 MDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSYAANANMDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTARIKADWEDQSIRPGWGGQHYSFLPSSTPPSPGRQIVPDPEWFRGVRMPQGGPTSPTFSLVASNPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEFAFRCNATGLVKPWEGERIHEECGSDDLELTLGNSRT 248
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: V7BWX4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G079400g PE=4 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.347e-99 Identity = 196/256 (76.56%), Postives = 219/256 (85.55%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQH-SFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP+ERMDIVGGS+ SPCSSYHPSP ASYNPSP SSSFPSP+SS Y PN D NSL PWLKNLS+ASSSASS K P+ Y+H GSISAPVTPPLSSPTARTPR+ +WEDQSV PGW+ QQH SFLPSS+PPSPGRQ+V DPEWF+G++ PH PTSPTFSL+SSNPF FKE+ L G GSRMWTP SGTCSPAIA G+DH AD+PMSE +SDEFAFGSN GLVKPWEGERIHE+ GSDDLELTLG+SKT Sbjct: 70 YRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSVRPGWTRQQHYSFLPSSSPPSPGRQVV-DPEWFAGIKLPHVNPTSPTFSLISSNPFAFKEDGLVGSGSRMWTPAHSGTCSPAIAPGTDHNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKT 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: G7IR04_MEDTR (Brassinazole-resistant 1 protein OS=Medicago truncatula GN=MTR_2g075400 PE=4 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 4.360e-98 Identity = 176/255 (69.02%), Postives = 204/255 (80.00%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP+E MD+VGGS+ SPCSSYHPSP +S PSP+SS Y N N D NSL PWLKNLS+ASSS SS K P+ Y H GSISAPVTPPLSSPT+RTPR+ D++DQS PGW+ Q +SFLPSS PPSP RQIV DPEWF+G++ PH+ PTSPTF+LVS +PF FKE+ +GGGSRMWTPGQSG CSPAIAAG D TAD+PMSE ISDEFAFGSN G+VKPWEGERIHE+ +DDLELTLG+SKT Sbjct: 70 YRKGCKPLENMDMVGGSSAASPCSSYHPSPGSSSFPSPSSSP--------YAANRNADGNSLIPWLKNLSTASSSGSSPKLPHPYFHSGSISAPVTPPLSSPTSRTPRLNADFDDQSARPGWTGQHYSFLPSSGPPSPARQIV-DPEWFAGIKLPHASPTSPTFNLVSRSPFAFKEDGFSGGGSRMWTPGQSGACSPAIAAGFDQTADIPMSEAISDEFAFGSNTFGIVKPWEGERIHEEFVADDLELTLGNSKT 315
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: F6HMC5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01790 PE=4 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.541e-97 Identity = 186/282 (65.96%), Postives = 210/282 (74.47%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNS---------------------------LFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDI+GGSA+ SPCSSY PSP ASYNPSP +S Y +P N L PWLKNLSS SSS SS + YIHGGSISAPVTPPLSSPTARTPR+KNDW+D + PGW+ Q++ FLPSSTPPSPGRQ+ PD WF+G+Q P P SPTFSLVS+NPFGFKEEVLAGGGSRMWTPGQSGTCSPA+AAGSDHTADVPM++ I+ EFAFGSN TGLVKPWEGERIHE+CGSD+LELTLGSS+T Sbjct: 69 YRKGCKPVERMDIMGGSASASPCSSYQPSPCASYNPSPCAS---------YNPSPCASYNPSPASSSFPSPVSSRYAANANASADANALIPWLKNLSSGSSSTSSKFPHHLYIHGGSISAPVTPPLSSPTARTPRLKNDWDDTTGGPGWAGQRY-FLPSSTPPSPGRQVHPDSGWFAGMQIPQGGPASPTFSLVSANPFGFKEEVLAGGGSRMWTPGQSGTCSPAVAAGSDHTADVPMADGIAAEFAFGSNTTGLVKPWEGERIHEECGSDELELTLGSSRT 340
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A072V958_MEDTR (Brassinazole-resistant 1 protein OS=Medicago truncatula GN=MTR_2g075410 PE=4 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 4.905e-97 Identity = 186/235 (79.15%), Postives = 203/235 (86.38%), Query Frame = -1 Query: 3 SPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 707 SPCSSYH SP ASYNPSP SSSFPSP SS + VNPNGD NSL PWLKNLSS SSSASSSK P YIH GSISAPVTPPLSSPTAR+P+ K DWEDQS PGW QQ+SF PSSTPPSPGRQ++ DP+WF+G++ PHS TSPTFSLV++NPFGF+EEV G SRMWTPGQSGTCSPA+AAGSDH AD+PMSE ISDEFAFGS+A GLVKPWEGERIHED GSDDLELTLG+SKT Sbjct: 3 SPCSSYHVSPCASYNPSPGSSSFPSPRSS-HAVNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIHTGSISAPVTPPLSSPTARSPQRKADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVL-DPDWFAGIRMPHSGQTSPTFSLVATNPFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLVKPWEGERIHEDSGSDDLELTLGTSKT 235 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 5
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097169 ID=g.barbadense_cottongen_reftransV1_0097169; Name=g.barbadense_cottongen_reftransV1_0097169; organism=Gossypium barbadense; type=contig; length=2033bpback to top |