g.barbadense_cottongen_reftransV1_0097146, g.barbadense_cottongen_reftransV1_0097146 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.285e-27 Identity = 82/241 (34.02%), Postives = 125/241 (51.87%), Query Frame = -3 Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSK-ITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPR----RIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041 ++G G +GR LL + + L + LRV+G++ S+++++ SD+ +D E + +++ ++L K + L E+ F N LVDC+A + + + G V+ NKK + + Y K + R +E+TVGAGLP+IS++ ++ +GD I RI G SGTL Y+ + E + S VV AK GYTEPDPRDDLSG DVARKV I Sbjct: 566 IIGPGLIGRTLLNQLKDQAAVLKENMNIDLRVMGIAGSRTMLL-SDIG---VDLTQWKEKLQTEAEPANLDKFVHHLSENHFFPNR-------------------VLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDRYLKLRTLQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGARTFSDVVAEAKKAGYTEPDPRDDLSGTDVARKVII 783
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: DHOM_YEAST (Homoserine dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOM6 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.091e-26 Identity = 81/252 (32.14%), Postives = 126/252 (50.00%), Query Frame = -3 Query: 1337 TMKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLD--IASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDK-FVSYPRR--IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKP----LSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2065 + K++ + ++G G VG L +++ +S + +V +++++ +I+ D V SD + + S ++T LD IA + + LVD ++S+ G + V G + NKK +S + F + P + HE+TVGAGLP+IS + II +GD + +I G SGTL Y+ +E + S VVK AK LGYTEPDPRDDL+G+DVARKV I Sbjct: 2 STKVVNVAVIGAGVVGSAFLDQLLAMKS-----TITYNLVLLAEAERSLISKDFSP-----------LNVGSDWKA-----------ALAASTTKTLPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTI 226
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCAI (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=thrA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.757e-26 Identity = 74/245 (30.20%), Postives = 123/245 (50.20%), Query Frame = -3 Query: 1337 KIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2059 K I + L+G GG+G LL I+ + K+ + +++ +++SK +++ + D + + + +L + +L ++ FSNS +VDC++S ++ VV +NKK TS Y K ++ +E+ VGAGLPVI ++ + SGD + G LSG+L ++ +E+G LSQ + AK LG+TEP+P DDLSG+DVARK+ I Sbjct: 465 KTIHMFLIGIGGIGSTLLNQILKQKQFLDKKNIEIKICAIANSKKILLLDNTN----DLSNWKNDFKKSTQKFNLELLNNLIKNNHFSNS-------------------VIVDCTSSQLLSEQYVNFIDNNFHVVTSNKKANTSEWNYYKKIRKSVAQTGKKFLYETNVGAGLPVIETLQNLFKSGDNLICFKGILSGSLSFIFGRLEEGILLSQATREAKELGFTEPNPCDDLSGIDVARKLLI 686
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCAP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=thrA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.774e-25 Identity = 72/246 (29.27%), Postives = 132/246 (53.66%), Query Frame = -3 Query: 1343 IIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSA----SSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKV 2056 II + L+G GGVG+ LL+ I+ ++ + ++ +++SK L+ + ++ N E + + +L+ + L ++ SNS ++DC++ S + I +K+G + ++ +NKK T + + Y + + ++ +E+ VGAGLPVI+++ + S+GD + G LSG+L ++ ++E+G LS+ K AK LG+TEP+P DDLSG+DVARK+ Sbjct: 464 IINVFLIGIGGVGKALLKQILKQEKFLDQKNIKIQFRMIANSKKLLFLKN----SINLNNWEENFKKSKEKFNLTILNELLKNTCDSNS-------------------VIIDCTSDYILSKQYISFIKKGFH----IITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLEEGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKL 682 HSP 2 Score: 69.707 bits (169), Expect = 6.974e-11 Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 477 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIE-GARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDI 878 ++ L+LAR +G I+L I IE + PE + S EEFL + LD+ ERV KA GNVLR++ IE +C+V I+E+ N+ L +++ +N L Y+ Y PLV++G GAGND TA+GV +D+L I Sbjct: 680 RKLLVLAREIGYSIELKDISIEPILPERFKKYQNS-EEFL-FKLKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDVTASGVFSDLLRI 812
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.080e-25 Identity = 78/240 (32.50%), Postives = 121/240 (50.42%), Query Frame = -3 Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041 ++G G +G LL + + L + LRV+G++ S++++++ + +D + EV + K + L K F S +VDC+A SE + + G V+ NKK + + Y K + RR +E+TV AGLP+I+++ ++ +GD I RI G SGTL Y+ + + P S+VV AK+ GYTEPDPRDDL+G DVARKV I Sbjct: 567 IVGPGLIGATLLDQLRDQAAILKENSKIDLRVMGITGSRTMLLS----ETGIDLSRWREVQKEKGQTAGLEKFVQHVRGNHFIPST------------------VIVDCTADSEVASHYHDWLCRGIHVITPNKKANSGPLDQYLKLRALQRRSYTHYFYEATVVAGLPIITTLQGLLETGDKILRIEGIFSGTLSYIFNNFKSTTPFSEVVSEAKAAGYTEPDPRDDLAGTDVARKVII 784 HSP 2 Score: 56.9954 bits (136), Expect = 6.054e-7 Identity = 47/134 (35.07%), Postives = 77/134 (57.46%), Query Frame = -2 Query: 483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878 ++ +ILAR G +++L I ++SL PE + S EEFL + + D+++ + + A G VLRYV V++ + V ++ K +L GSDN+ + Y++QP +I+G GAG + TA GV +DIL Sbjct: 780 RKVIILARGSGLKLELSDIPVQSLVPEPLR-GIASAEEFLLQ-LPQFDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDIL 911
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCBP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=thrA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.481e-25 Identity = 70/242 (28.93%), Postives = 126/242 (52.07%), Query Frame = -3 Query: 1337 LILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASD-VKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2047 + L+G G VG+ L+ I+ ++ + + L++ G+++SK+ I+ D + K ++ +LSK S + ++ ++ + I +VDC++ +N G +V NKK T+ + Y+ ++ +E+ VGAGLPVI ++ ++ +GD + G LSG+L ++ ++ED LS+ K A+SLG+TEP+P+DDLSG+DVARK+ I Sbjct: 469 IFLIGIGRVGQTFLKQIIEQKNWLKSKNIDLKICGIANSKNFILNLDGINPKNWKRDL------------NLSK-KSFNFKHLLNSIQNYYLINPI-----------IVDCTSDKNIANQYISFINCGFHIVTPNKKANTTNWKYYEDIRLAAQKEKKKFFYETNVGAGLPVIENLKNLLRTGDTLIHFKGILSGSLSFIFGKLEDNISLSEATKQAQSLGFTEPNPKDDLSGIDVARKLLI 686 HSP 2 Score: 63.929 bits (154), Expect = 3.954e-9 Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 477 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVI-EGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDI 878 ++ LILAR +G +++L IKIE L P+E N + +F+ + LD RVKKA G LR+V +I + C V I E+ N L ++ +N L YS+ Y PLV++G GAGN+ TA+G+ +D+L I Sbjct: 682 RKLLILAREVGYKLELKDIKIEPLLPKEFN-NISNTTDFITK-LKELDQIFCNRVKKARKLGKRLRFVGIINQKGNCQVKIDEVDHNDPLYNIKNGENALAFYSKYYQPIPLVLRGYGAGNNVTASGIFSDVLRI 814
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.549e-24 Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = -3 Query: 1343 LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSL-SKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPR----RIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKV 1981 L + LRV+G++ S ++++ SD +D ++ + +++ + + S + L ++ VF N LVDC+A + + + G V+ NKK + + Y K + R +E+TVGAGLP+IS++ ++ +GD I RI G SGTL Y+ + E + S VV A+ GYTEPDPRDDLSG DVARKV Sbjct: 584 LKENMNIDLRVIGITGSSTMLL-SDTG---IDLTQWKQLLQKEAEPADIGSFVHHLSDNHVFPNK-------------------VLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDQYLKLRTMQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVAEAREAGYTEPDPRDDLSGTDVARKV 778
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AK1H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.173e-23 Identity = 74/230 (32.17%), Postives = 122/230 (53.04%), Query Frame = -3 Query: 1337 LLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYP-----RRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2011 LL+ + +S + + LRV GV++SK+L+ ++V L+ N E+ + K + +L ++ L + N +VDC++S + + G VV NKK TS+ DY + Y R+ +++ VGAGLPVI ++ ++++GD + + G LSG+L Y+ ++++G S+ A+ +GYTEPDPRDDLSGMDVARK+ I Sbjct: 480 LLEQLKRQQSWLKNKHIDLRVCGVANSKALL--TNVHGLNLE-NWQEELAQAK-EPFNLGRLIRLVKEYHLLNP-------------------VIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSS-MDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLI 685 HSP 2 Score: 64.6994 bits (156), Expect = 2.271e-9 Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = -2 Query: 483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVI-EGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878 ++ LILAR G+ ++L I+IE + P E V F+ + +LD+ RV KA G VLRYV I E C V I E+ N L +++ +N L YS Y PLV++G GAGND TAAGV AD+L Sbjct: 681 RKLLILARETGRELELADIEIEPVLPAEFNAEG-DVAAFM-ANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLL 811
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.131e-23 Identity = 82/240 (34.17%), Postives = 122/240 (50.83%), Query Frame = -3 Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041 ++G G +G LL + + L + + LRV+G++ SK +++ SD+ +D + E+ K + L K T QV N V+ VDC+A S + + G V+ NKK + + Y K R+ +E+TVGAGLP+IS++ ++ +GD I RI G SGTL Y+ + + S+VV AK+ G+TEPDPRDDLSG DVARKV I Sbjct: 562 IVGPGLIGATLLDQLRDQAAVLKQEFNIDLRVLGITGSKKMLL-SDIG---IDLSRWRELLNEKGTEADLDKFTQ----QVHGNHFIPNSVV--------------VDCTADSAIASRYYDWLRKGIHVITPNKKANSGPLDQYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDRSFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVII 779 HSP 2 Score: 60.4622 bits (145), Expect = 5.298e-8 Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878 ++ +ILAR G ++DL + I SL PE + SVEEF+ + + D ++ + A +G VLRYV V++ + V ++ K +L GSDN++ + Y PL+++G GAG TA G+ +DIL Sbjct: 775 RKVIILARESGLKLDLADLPIRSLVPEPLK-GCTSVEEFMEK-LPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDIL 906
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.363e-22 Identity = 70/214 (32.71%), Postives = 110/214 (51.40%), Query Frame = -3 Query: 1337 VHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVF-SNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 1963 + LRV+G++ S ++++ + +D + E+ + + + + + K T + F NS +VDC+A ++ + + G VV NKK + + Y K R+ +E+TVGAGLP+IS++ ++ +GD I RI G SGTL Y+ + + S+VV AK G+TEPDPRDDLSG DVARKV I Sbjct: 584 IDLRVIGITGSSKMLMS----ESGIDLSRWRELMKEEGEKADMEKFTQYVKGNHFIPNS-------------------VMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTI 774 HSP 2 Score: 59.6918 bits (143), Expect = 8.680e-8 Identity = 42/134 (31.34%), Postives = 78/134 (58.21%), Query Frame = -2 Query: 483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878 ++ ILAR G ++DL + +++L P+ + S EEF+ + + D + ++ ++A G VLRYV V++ + V ++ K+ +L G+DN++ ++ Y +QPL+++G GAG TA G+ +DIL Sbjct: 770 RKVTILARESGLKLDLEGLPVQNLVPKPLQACA-SAEEFMEK-LPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDIL 901
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A078FUD3_BRANA (Homoserine dehydrogenase OS=Brassica napus GN=BnaC09g36820D PE=3 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 1.924e-111 Identity = 180/244 (73.77%), Postives = 210/244 (86.07%), Query Frame = -3 Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLG--ESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062 MK I +ILMGCGGVGRQLLQHIVS RSLHAK GVHLRVVGVSDSKSL + DV ++ LDD++L+EVC +KS GS+L+ + +LG E +VF+ SES + +IA +LGKSTGL +VDCSASSET+ +L + V+LGCCVVLANKKPLTST E YDK V PRRIRHESTVGAGLPVI+S+NRIISSGDP+H IVGSLSGTLGYVMSE+EDG+PLSQVV++AK+LGYTEPDPRDDLSGMDVARK I Sbjct: 1 MKKISVILMGCGGVGRQLLQHIVSFRSLHAKMGVHLRVVGVSDSKSLAVPVDVLKEGLDDDLLSEVCSIKSAGSALTTLGALGKGEYRVFNGSESIRETEEIAQLLGKSTGLVVVDCSASSETVEILMKAVDLGCCVVLANKKPLTSTLEHYDKLVLDPRRIRHESTVGAGLPVIASMNRIISSGDPVHSIVGSLSGTLGYVMSELEDGRPLSQVVRAAKTLGYTEPDPRDDLSGMDVARKALI 244 HSP 2 Score: 187.193 bits (474), Expect = 5.486e-49 Identity = 103/139 (74.10%), Postives = 122/139 (87.77%), Query Frame = -2 Query: 462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878 ++ALILARLLGKRI + SIKIESLYPEEM P M+V++FL G+ +LD NIEERVK+AS NG VLRYVC+IEG+ VGI+E+PK+S LGRLRGSDN++EI SRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLFP Sbjct: 240 RKALILARLLGKRIVMDSIKIESLYPEEMRPGVMTVDDFLQNGIAKLDQNIEERVKRASSNGCVLRYVCMIEGSSVQVGIREVPKDSPLGRLRGSDNIVEIRSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDMQDLFP 378
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A087G8W6_ARAAL (Homoserine dehydrogenase OS=Arabis alpina GN=AALP_AA8G232000 PE=3 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 4.654e-111 Identity = 177/244 (72.54%), Postives = 210/244 (86.07%), Query Frame = -3 Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSL--GESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062 MK IP+ LMGCGGVGR LLQHIVSCRS+H+K GV+LRV+GV DSKSL++ DV ++EL+D +L+E+C VKS GSSLSK+ +L G QVF++SESR +IA LGKSTGLA+VDCSA+ +TI VL + V+ GCCVVLANKKPLTST E YDK V +PR +RHESTVGAGLPVI+S+NRIISSGDP+H+IVGSLSGTLGYVMSE+EDGKPLSQVV++AK+LGYTEPDPRDDLSGMDVARK I Sbjct: 1 MKKIPVFLMGCGGVGRYLLQHIVSCRSIHSKLGVYLRVIGVCDSKSLLVPMDVLKEELNDEVLSEICIVKSTGSSLSKLGALEKGGYQVFNDSESRKVTEEIAERLGKSTGLAVVDCSATMDTIEVLMKAVDEGCCVVLANKKPLTSTMEHYDKLVLHPRHVRHESTVGAGLPVIASMNRIISSGDPVHKIVGSLSGTLGYVMSELEDGKPLSQVVRAAKTLGYTEPDPRDDLSGMDVARKALI 244 HSP 2 Score: 189.889 bits (481), Expect = 6.727e-50 Identity = 106/139 (76.26%), Postives = 123/139 (88.49%), Query Frame = -2 Query: 462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878 ++ALILARLLGKR+ + SIKIESLYPEEMGP MSV++FLN +V LD NIE+RVK+AS NG VLRYVCVIEG+ VGI+E+ K+S LGRLRGSDN++EIYSRCY +QPLVIQGAGAGNDTTAAGVLADILD+QDLFP Sbjct: 240 RKALILARLLGKRVVMDSIKIESLYPEEMGPGLMSVDDFLNNEIVNLDQNIEDRVKRASSNGCVLRYVCVIEGSSVQVGIREVSKDSPLGRLRGSDNIVEIYSRCYKEQPLVIQGAGAGNDTTAAGVLADILDLQDLFP 378
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: D7M071_ARALL (Homoserine dehydrogenase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910146 PE=3 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 6.198e-111 Identity = 175/239 (73.22%), Postives = 204/239 (85.36%), Query Frame = -3 Query: 1346 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARK 2062 MK I ++LMGCGGVGR LLQHI SCRSLHAK GV LRVVGV DSKSL+ DV ++EL+D +L+EVCR+KS G +LSK+ +LG +VF+ SE + +IA +LGKS GLA+VDCSAS ETI +L + V+LGCCVVLANKKPLTST E YDK +PR IRHESTVGAGLPVI+S+NRIISSGDP+HRIVGSLSGTLGYVMSE+EDGKPLSQVV++AK+LGYTEPDPRDDLSGMDVARK Sbjct: 1 MKKIAVLLMGCGGVGRHLLQHIASCRSLHAKMGVQLRVVGVCDSKSLVAPMDVLKEELNDELLSEVCRIKSSGLALSKLGALGGYRVFNASELSRETEEIAKLLGKSAGLAVVDCSASMETIEILMKAVDLGCCVVLANKKPLTSTLEHYDKLALHPRFIRHESTVGAGLPVIASLNRIISSGDPVHRIVGSLSGTLGYVMSELEDGKPLSQVVQAAKTLGYTEPDPRDDLSGMDVARK 239 HSP 2 Score: 192.2 bits (487), Expect = 8.548e-51 Identity = 105/138 (76.09%), Postives = 124/138 (89.86%), Query Frame = -2 Query: 465 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLF 878 ++ LILARLLGKRI + SIKIES+YPEEMGP MSV++FL+ G+V+LD NIEERVK+AS NG VLRYVCVIEG+ VGI+E+PK+S LGRLRGSDN++EIYSRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLF Sbjct: 238 RKGLILARLLGKRIIMDSIKIESMYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVKRASSNGCVLRYVCVIEGSSVQVGIREVPKDSPLGRLRGSDNIVEIYSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDLQDLF 375
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A059ABI7_EUCGR (Homoserine dehydrogenase OS=Eucalyptus grandis GN=EUGRSUZ_J00623 PE=3 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.497e-110 Identity = 177/243 (72.84%), Postives = 202/243 (83.13%), Query Frame = -3 Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLII-ASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062 MK + L+LMGCGGVGRQLL+HIVSCRSLHA QGVHLRVVGV DSKSL++ A D ELDD L EVCRVK DGSSLSK++ G +VF++SE KV ++ S LG LA+VDCSASSET +L ++LGCC+VLANKKPLT+T E YDK VS PRRIRHESTV AGLP+I+S+NRI+SSGDP+HR+VGSLSGTLGYVMSEVEDGKPLSQVVK+AKSLGYTEPDPRDDL GMDVARK I Sbjct: 1 MKKMTLLLMGCGGVGRQLLRHIVSCRSLHATQGVHLRVVGVCDSKSLVVVAPDAHMLELDDKFLLEVCRVKEDGSSLSKLSGFGACRVFAHSELTAKVFNMVSHLG----LAVVDCSASSETTEILSRAIDLGCCIVLANKKPLTATMEYYDKLVSQPRRIRHESTVRAGLPIIASLNRILSSGDPVHRLVGSLSGTLGYVMSEVEDGKPLSQVVKTAKSLGYTEPDPRDDLGGMDVARKALI 239 HSP 2 Score: 193.741 bits (491), Expect = 2.243e-51 Identity = 105/139 (75.54%), Postives = 125/139 (89.93%), Query Frame = -2 Query: 462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878 ++ALILARLLG+RI + SIK+ESLYP+EMGP MSV++FL+ G+ LD +I +RV KAS++G VLRYVCVIEG RC VGIQELP++S LGRLRGSDNVLE+Y+RCY++QPLVIQGAGAGNDTTAAGVLADILDIQDLFP Sbjct: 235 RKALILARLLGRRITMDSIKVESLYPDEMGPTVMSVDDFLSKGLPLLDTSICKRVAKASVSGKVLRYVCVIEGTRCEVGIQELPRDSPLGRLRGSDNVLEVYTRCYNKQPLVIQGAGAGNDTTAAGVLADILDIQDLFP 373
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: Q8LF92_ARATH (Homoserine dehydrogenase OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 2.041e-110 Identity = 173/239 (72.38%), Postives = 205/239 (85.77%), Query Frame = -3 Query: 1346 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARK 2062 MK IP++LMGCGGVGR LLQHIVSCRSLHAK GVH+RV+GV DSKSL+ DV ++EL+D +L+EVC +KS GS+LSK+ +LG +V +SE T+ +IA +LGKSTGLA+VDCSAS ETI +L + V+LGCC+VLANKKP+TST E YDK +PR IRHESTVGAGLPVI+S+NRIISSGDP+HRIVGSLS TLGYVMSE+EDGKPLSQVV++AK LGYTEPDPRDDL GMDVARK Sbjct: 1 MKKIPVLLMGCGGVGRHLLQHIVSCRSLHAKMGVHIRVIGVCDSKSLVAPMDVLKEELNDELLSEVCLIKSTGSALSKLGALGGYRVVHDSELSTETEEIAKLLGKSTGLAVVDCSASMETIEILMKAVDLGCCIVLANKKPVTSTLEHYDKLALHPRFIRHESTVGAGLPVIASLNRIISSGDPVHRIVGSLSVTLGYVMSELEDGKPLSQVVQAAKKLGYTEPDPRDDLGGMDVARK 239 HSP 2 Score: 188.734 bits (478), Expect = 1.558e-49 Identity = 105/138 (76.09%), Postives = 122/138 (88.41%), Query Frame = -2 Query: 465 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLF 878 ++ LILARLLGKRI + SIKIESLYPEEMGP MSV++FL+ G+V+LD NIEERVKKAS G VLRYVCVIEG+ VGI+E+ K+S LGRLRGSDN++EIYSRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLF Sbjct: 238 RKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVKKASSKGCVLRYVCVIEGSSVQVGIREVSKDSPLGRLRGSDNIVEIYSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDLQDLF 375 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 20
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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097146 ID=g.barbadense_cottongen_reftransV1_0097146; Name=g.barbadense_cottongen_reftransV1_0097146; organism=Gossypium barbadense; type=contig; length=2253bpback to top |