g.barbadense_cottongen_reftransV1_0097146, g.barbadense_cottongen_reftransV1_0097146 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097146
Unique Name	g.barbadense_cottongen_reftransV1_0097146
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2253

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.285e-27
Identity = 82/241 (34.02%), Postives = 125/241 (51.87%), Query Frame = -3

Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSK-ITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPR----RIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041
            ++G G +GR LL  +    + L     + LRV+G++ S+++++ SD+    +D     E  + +++ ++L K +  L E+  F N                     LVDC+A +       + +  G  V+  NKK  +   + Y K  +  R       +E+TVGAGLP+IS++  ++ +GD I RI G  SGTL Y+ +  E  +  S VV  AK  GYTEPDPRDDLSG DVARKV I
Sbjct:  566 IIGPGLIGRTLLNQLKDQAAVLKENMNIDLRVMGIAGSRTMLL-SDIG---VDLTQWKEKLQTEAEPANLDKFVHHLSENHFFPNR-------------------VLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDRYLKLRTLQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGARTFSDVVAEAKKAGYTEPDPRDDLSGTDVARKVII 783

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: DHOM_YEAST (Homoserine dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOM6 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.091e-26
Identity = 81/252 (32.14%), Postives = 126/252 (50.00%), Query Frame = -3

Query: 1337 TMKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLD--IASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDK-FVSYPRR--IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKP----LSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2065
            + K++ + ++G G VG   L  +++ +S      +   +V +++++  +I+ D                V SD  +             + S ++T  LD  IA +      + LVD ++S+   G   + V  G  +   NKK  +S    +   F + P    + HE+TVGAGLP+IS +  II +GD + +I G  SGTL Y+ +E    +      S VVK AK LGYTEPDPRDDL+G+DVARKV I
Sbjct:    2 STKVVNVAVIGAGVVGSAFLDQLLAMKS-----TITYNLVLLAEAERSLISKDFSP-----------LNVGSDWKA-----------ALAASTTKTLPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTI 226

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCAI (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=thrA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.757e-26
Identity = 74/245 (30.20%), Postives = 123/245 (50.20%), Query Frame = -3

Query: 1337 KIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2059
            K I + L+G GG+G  LL  I+  +    K+ + +++  +++SK +++  +      D +      +  +   +L  + +L ++  FSNS                    +VDC++S          ++    VV +NKK  TS    Y K         ++  +E+ VGAGLPVI ++  +  SGD +    G LSG+L ++   +E+G  LSQ  + AK LG+TEP+P DDLSG+DVARK+ I
Sbjct:  465 KTIHMFLIGIGGIGSTLLNQILKQKQFLDKKNIEIKICAIANSKKILLLDNTN----DLSNWKNDFKKSTQKFNLELLNNLIKNNHFSNS-------------------VIVDCTSSQLLSEQYVNFIDNNFHVVTSNKKANTSEWNYYKKIRKSVAQTGKKFLYETNVGAGLPVIETLQNLFKSGDNLICFKGILSGSLSFIFGRLEEGILLSQATREAKELGFTEPNPCDDLSGIDVARKLLI 686

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCAP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=thrA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.774e-25
Identity = 72/246 (29.27%), Postives = 132/246 (53.66%), Query Frame = -3

Query: 1343 IIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSA----SSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKV 2056
            II + L+G GGVG+ LL+ I+       ++ + ++   +++SK L+   +     ++ N   E  +   +  +L+ +  L ++   SNS                    ++DC++    S + I  +K+G +    ++ +NKK  T + + Y +     +   ++  +E+ VGAGLPVI+++  + S+GD +    G LSG+L ++  ++E+G  LS+  K AK LG+TEP+P DDLSG+DVARK+
Sbjct:  464 IINVFLIGIGGVGKALLKQILKQEKFLDQKNIKIQFRMIANSKKLLFLKN----SINLNNWEENFKKSKEKFNLTILNELLKNTCDSNS-------------------VIIDCTSDYILSKQYISFIKKGFH----IITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLEEGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKL 682

HSP 2 Score: 69.707 bits (169), Expect = 6.974e-11
Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = -2

Query:  477 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIE-GARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDI 878
            ++ L+LAR +G  I+L  I IE + PE     + S EEFL   +  LD+   ERV KA   GNVLR++  IE   +C+V I+E+  N+ L +++  +N L  Y+  Y   PLV++G GAGND TA+GV +D+L I
Sbjct:  680 RKLLVLAREIGYSIELKDISIEPILPERFKKYQNS-EEFL-FKLKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDVTASGVFSDLLRI 812

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.080e-25
Identity = 78/240 (32.50%), Postives = 121/240 (50.42%), Query Frame = -3

Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041
            ++G G +G  LL  +    + L     + LRV+G++ S++++++    +  +D +   EV + K   + L K         F  S                    +VDC+A SE      + +  G  V+  NKK  +   + Y K  +  RR      +E+TV AGLP+I+++  ++ +GD I RI G  SGTL Y+ +  +   P S+VV  AK+ GYTEPDPRDDL+G DVARKV I
Sbjct:  567 IVGPGLIGATLLDQLRDQAAILKENSKIDLRVMGITGSRTMLLS----ETGIDLSRWREVQKEKGQTAGLEKFVQHVRGNHFIPST------------------VIVDCTADSEVASHYHDWLCRGIHVITPNKKANSGPLDQYLKLRALQRRSYTHYFYEATVVAGLPIITTLQGLLETGDKILRIEGIFSGTLSYIFNNFKSTTPFSEVVSEAKAAGYTEPDPRDDLAGTDVARKVII 784

HSP 2 Score: 56.9954 bits (136), Expect = 6.054e-7
Identity = 47/134 (35.07%), Postives = 77/134 (57.46%), Query Frame = -2

Query:  483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878
            ++ +ILAR  G +++L  I ++SL PE +     S EEFL   + + D+++  + + A   G VLRYV V++    +  V ++   K     +L GSDN+    +  Y++QP +I+G GAG + TA GV +DIL
Sbjct:  780 RKVIILARGSGLKLELSDIPVQSLVPEPLR-GIASAEEFLLQ-LPQFDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDIL 911

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH_BUCBP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=thrA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.481e-25
Identity = 70/242 (28.93%), Postives = 126/242 (52.07%), Query Frame = -3

Query: 1337 LILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASD-VKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKF----VSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2047
            + L+G G VG+  L+ I+  ++    + + L++ G+++SK+ I+  D +  K    ++            +LSK  S     + ++ ++   +  I           +VDC++           +N G  +V  NKK  T+  + Y+          ++  +E+ VGAGLPVI ++  ++ +GD +    G LSG+L ++  ++ED   LS+  K A+SLG+TEP+P+DDLSG+DVARK+ I
Sbjct:  469 IFLIGIGRVGQTFLKQIIEQKNWLKSKNIDLKICGIANSKNFILNLDGINPKNWKRDL------------NLSK-KSFNFKHLLNSIQNYYLINPI-----------IVDCTSDKNIANQYISFINCGFHIVTPNKKANTTNWKYYEDIRLAAQKEKKKFFYETNVGAGLPVIENLKNLLRTGDTLIHFKGILSGSLSFIFGKLEDNISLSEATKQAQSLGFTEPNPKDDLSGIDVARKLLI 686

HSP 2 Score: 63.929 bits (154), Expect = 3.954e-9
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = -2

Query:  477 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVI-EGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDI 878
            ++ LILAR +G +++L  IKIE L P+E   N  +  +F+   +  LD     RVKKA   G  LR+V +I +   C V I E+  N  L  ++  +N L  YS+ Y   PLV++G GAGN+ TA+G+ +D+L I
Sbjct:  682 RKLLILAREVGYKLELKDIKIEPLLPKEFN-NISNTTDFITK-LKELDQIFCNRVKKARKLGKRLRFVGIINQKGNCQVKIDEVDHNDPLYNIKNGENALAFYSKYYQPIPLVLRGYGAGNNVTASGIFSDVLRI 814

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.549e-24
Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = -3

Query: 1343 LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSL-SKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPR----RIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKV 1981
            L     + LRV+G++ S ++++ SD     +D     ++ + +++ + + S +  L ++ VF N                     LVDC+A +       + +  G  V+  NKK  +   + Y K  +  R       +E+TVGAGLP+IS++  ++ +GD I RI G  SGTL Y+ +  E  +  S VV  A+  GYTEPDPRDDLSG DVARKV
Sbjct:  584 LKENMNIDLRVIGITGSSTMLL-SDTG---IDLTQWKQLLQKEAEPADIGSFVHHLSDNHVFPNK-------------------VLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDQYLKLRTMQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVAEAREAGYTEPDPRDDLSGTDVARKV 778

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AK1H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.173e-23
Identity = 74/230 (32.17%), Postives = 122/230 (53.04%), Query Frame = -3

Query: 1337 LLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYP-----RRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2011
            LL+ +   +S    + + LRV GV++SK+L+  ++V    L+ N   E+ + K +  +L ++  L +     N                     +VDC++S        + +  G  VV  NKK  TS+  DY   + Y      R+  +++ VGAGLPVI ++  ++++GD + +  G LSG+L Y+  ++++G   S+    A+ +GYTEPDPRDDLSGMDVARK+ I
Sbjct:  480 LLEQLKRQQSWLKNKHIDLRVCGVANSKALL--TNVHGLNLE-NWQEELAQAK-EPFNLGRLIRLVKEYHLLNP-------------------VIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSS-MDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLI 685

HSP 2 Score: 64.6994 bits (156), Expect = 2.271e-9
Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = -2

Query:  483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVI-EGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878
            ++ LILAR  G+ ++L  I+IE + P E       V  F+   + +LD+    RV KA   G VLRYV  I E   C V I E+  N  L +++  +N L  YS  Y   PLV++G GAGND TAAGV AD+L
Sbjct:  681 RKLLILARETGRELELADIEIEPVLPAEFNAEG-DVAAFM-ANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLL 811

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.131e-23
Identity = 82/240 (34.17%), Postives = 122/240 (50.83%), Query Frame = -3

Query: 1337 LMGCGGVGRQLLQHIVSCRS-LHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2041
            ++G G +G  LL  +    + L  +  + LRV+G++ SK +++ SD+    +D +   E+   K   + L K T     QV  N      V+              VDC+A S       + +  G  V+  NKK  +   + Y K     R+      +E+TVGAGLP+IS++  ++ +GD I RI G  SGTL Y+ +     +  S+VV  AK+ G+TEPDPRDDLSG DVARKV I
Sbjct:  562 IVGPGLIGATLLDQLRDQAAVLKQEFNIDLRVLGITGSKKMLL-SDIG---IDLSRWRELLNEKGTEADLDKFTQ----QVHGNHFIPNSVV--------------VDCTADSAIASRYYDWLRKGIHVITPNKKANSGPLDQYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDRSFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVII 779

HSP 2 Score: 60.4622 bits (145), Expect = 5.298e-8
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = -2

Query:  483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878
            ++ +ILAR  G ++DL  + I SL PE +     SVEEF+   + + D ++ +    A  +G VLRYV V++    +  V ++   K     +L GSDN++   +  Y   PL+++G GAG   TA G+ +DIL
Sbjct:  775 RKVIILARESGLKLDLADLPIRSLVPEPLK-GCTSVEEFMEK-LPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDIL 906

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.363e-22
Identity = 70/214 (32.71%), Postives = 110/214 (51.40%), Query Frame = -3

Query: 1337 VHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVF-SNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRR----IRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 1963
            + LRV+G++ S  ++++    +  +D +   E+ + + + + + K T   +   F  NS                    +VDC+A ++      + +  G  VV  NKK  +   + Y K     R+      +E+TVGAGLP+IS++  ++ +GD I RI G  SGTL Y+ +     +  S+VV  AK  G+TEPDPRDDLSG DVARKV I
Sbjct:  584 IDLRVIGITGSSKMLMS----ESGIDLSRWRELMKEEGEKADMEKFTQYVKGNHFIPNS-------------------VMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTI 774

HSP 2 Score: 59.6918 bits (143), Expect = 8.680e-8
Identity = 42/134 (31.34%), Postives = 78/134 (58.21%), Query Frame = -2

Query:  483 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGA--RCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADIL 878
            ++  ILAR  G ++DL  + +++L P+ +     S EEF+   + + D  + ++ ++A   G VLRYV V++    +  V ++   K+    +L G+DN++   ++ Y +QPL+++G GAG   TA G+ +DIL
Sbjct:  770 RKVTILARESGLKLDLEGLPVQNLVPKPLQACA-SAEEFMEK-LPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDIL 901

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: M4CDS1_BRARP (Homoserine dehydrogenase OS=Brassica rapa subsp. pekinensis GN=Bra002352 PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 2.039e-113
Identity = 181/244 (74.18%), Postives = 210/244 (86.07%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLG--ESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK I +ILMGCGGVGRQLLQHIVS RSLHAK GVHLRVVGVSDSKSL++  DV ++ELDD +L+ VCR+KS GS L+ + +LG  E +VF+ SESR +  +IA +LGKSTGL +VDCSASSET+ +L + V+LGCC VLANKKPLTST E YDK V  PRRIRHESTVGAGLPVI+S+NRIISSGDP+H IVGSLSGTLGYVMSE+EDG+PLSQVV++AK+LGYTEPDPRDDLSGMDVARK  I
Sbjct:    1 MKKISVILMGCGGVGRQLLQHIVSFRSLHAKMGVHLRVVGVSDSKSLVVPVDVLKEELDDELLSVVCRIKSAGSPLTTLDALGKGEYRVFNGSESRRETEEIAQLLGKSTGLVVVDCSASSETVEILTKAVDLGCCAVLANKKPLTSTLEHYDKLVLDPRRIRHESTVGAGLPVIASMNRIISSGDPVHSIVGSLSGTLGYVMSELEDGRPLSQVVRAAKTLGYTEPDPRDDLSGMDVARKALI 244

HSP 2 Score: 188.734 bits (478), Expect = 1.308e-49
Identity = 103/139 (74.10%), Postives = 123/139 (88.49%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILARLLGKRI + SIKIESLYPEEMGP  M+V++FL  G+ +LD NIEERV++AS NG VLRYVC+IEG+   VGI+E+PK+S LGRLRGSDN++EI SRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLFP
Sbjct:  240 RKALILARLLGKRIIMDSIKIESLYPEEMGPGVMTVDDFLQNGIAKLDQNIEERVQRASSNGCVLRYVCMIEGSSVQVGIREVPKDSPLGRLRGSDNIVEIRSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDMQDLFP 378

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: B7FM35_MEDTR (Homoserine dehydrogenase OS=Medicago truncatula GN=MTR_3g079330 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 8.312e-113
Identity = 177/242 (73.14%), Postives = 206/242 (85.12%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IPLILMGCGGVG  LLQHIVS RSLH+ QG+ LRVVG+ DSKSL++  D+  K  DD+ L E+CR+K  G SLSK+  LG+ QVF + ES  K+L+IAS LGK TGLA VDC+ASS+TI VLK+ V+LGCCVV+ANKKPLTST  D++K ++YPRRIRHESTVGAGLPVISS+NRIISSGDP++RI+GSLSGTLGYVMSEVEDGKPLSQVV++AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKTIPLILMGCGGVGSHLLQHIVSSRSLHSSQGLCLRVVGIGDSKSLVVVDDLLNKGFDDSFLLELCRLKHGGESLSKLGDLGQCQVFVHPESEGKILEIASQLGKKTGLAFVDCTASSDTIVVLKQVVDLGCCVVMANKKPLTSTMGDFEKLLTYPRRIRHESTVGAGLPVISSLNRIISSGDPVNRIIGSLSGTLGYVMSEVEDGKPLSQVVRAAKSLGYTEPDPRDDLGGMDVARKALI 242

HSP 2 Score: 197.978 bits (502), Expect = 7.271e-53
Identity = 107/139 (76.98%), Postives = 129/139 (92.81%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILAR+LG+RI++ SI+IESLYP+EMGP+ M+ ++FL+ G++ LD +I+ERV+KA+ NGNVLRYVCVIEG RC VGIQELPKNSALGRLRGSDNVLE+Y+RCYS QPLVIQGAGAGNDTTAAGVLADI+DIQDLFP
Sbjct:  238 RKALILARILGRRINMDSIQIESLYPKEMGPDVMTDDDFLSCGLLLLDKDIQERVEKAASNGNVLRYVCVIEGPRCEVGIQELPKNSALGRLRGSDNVLEVYTRCYSNQPLVIQGAGAGNDTTAAGVLADIVDIQDLFP 376

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: Q3S3F6_SOYBN (Homoserine dehydrogenase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 8.674e-113
Identity = 174/242 (71.90%), Postives = 201/242 (83.06%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IPLILMGCGGVGRQLLQHIVSCRSLH  QG+ LRVVGV DSKSL++  D+  + L+D  L E+CRVKS G SL K+   G+ Q F + ES+ K+L+IA  LGK TGL  VDCSASS+T+ VLK+ +++GCC V+ANKKPLTST ED+ K   YPRRIRHESTVGAGLPVI+S+NRIISSGDP+H+I+GSLSGTLGYVMSEVEDGKPLSQVV+ AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKNIPLILMGCGGVGRQLLQHIVSCRSLHFTQGLCLRVVGVGDSKSLVVTEDLLHEGLNDGFLLELCRVKSVGESLLKLLDFGKCQAFVHPESQGKILEIAFQLGKKTGLVFVDCSASSDTVAVLKQAIDMGCCAVMANKKPLTSTMEDFKKLFIYPRRIRHESTVGAGLPVIASLNRIISSGDPVHQIIGSLSGTLGYVMSEVEDGKPLSQVVRDAKSLGYTEPDPRDDLGGMDVARKALI 242

HSP 2 Score: 197.593 bits (501), Expect = 1.328e-52
Identity = 108/139 (77.70%), Postives = 128/139 (92.09%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILAR+LG +I+L SI+IESLYP+EMGP  M+VE+FLN G++ LD +I++RV+KA+ NGNVLRYVCVI G+RC VGIQELPKNS LGRLRGSDNVLEIY+RCYS+QPLVIQGAGAGNDTTAAGVLADI+DIQDLFP
Sbjct:  238 RKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVEKAASNGNVLRYVCVIMGSRCEVGIQELPKNSPLGRLRGSDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLADIVDIQDLFP 376

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A0B2S1G5_GLYSO (Homoserine dehydrogenase OS=Glycine soja GN=glysoja_042608 PE=3 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.485e-112
Identity = 174/242 (71.90%), Postives = 201/242 (83.06%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IPLILMGCGGVGRQLLQHIVSCRSLH+ QG+ LRVVGV DSKSL++  D+  + L D  L E+CRVKS G SL K+   G+ Q F + ES+ K+L+IA  LGK TGL  VDCSASS+T+ VLK+ +++GCC V+ANKKPLTST ED+ K   YPRRIRHESTVGAGLPVI+S+NRIISSGDP+H+I+GSLSGTLGYVMSEVEDGKPLSQVV+ AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKNIPLILMGCGGVGRQLLQHIVSCRSLHSTQGLCLRVVGVGDSKSLVVTEDLLHEGLKDGFLLELCRVKSVGESLLKLLDFGKCQAFVHPESQGKILEIAFQLGKKTGLVFVDCSASSDTVAVLKQAIDMGCCAVMANKKPLTSTMEDFKKLFIYPRRIRHESTVGAGLPVIASLNRIISSGDPVHQIIGSLSGTLGYVMSEVEDGKPLSQVVRDAKSLGYTEPDPRDDLGGMDVARKALI 242

HSP 2 Score: 187.963 bits (476), Expect = 4.090e-49
Identity = 108/153 (70.59%), Postives = 128/153 (83.66%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGAR--------------CNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILAR+LG +I+L SI+IESLYP+EMGP  M+VE+FLN G++ LD +I++RV+KA+ NGNVLRYVCVI G+R              C VGIQELPKNS LGRLRGSDNVLEIY+RCYS+QPLVIQGAGAGNDTTAAGVLADI+DIQDLFP
Sbjct:  238 RKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVEKAASNGNVLRYVCVIMGSRHLRFPPFAHIFFYLCEVGIQELPKNSPLGRLRGSDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLADIVDIQDLFP 390

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: C6TCU7_SOYBN (Homoserine dehydrogenase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 1.592e-112
Identity = 174/242 (71.90%), Postives = 200/242 (82.64%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IPLILMGCGGVGRQLLQHIVSCRSLH  QG+ LRVVGV DSKSL++  D+  + L+D  L E+CRVKS G SL K+   G+ Q F + ES+ K+L+IA  LGK TGL  VDCSASS+T+ VLK+ + +GCC V+ANKKPLTST ED+ K   YPRRIRHESTVGAGLPVI+S+NRIISSGDP+H+I+GSLSGTLGYVMSEVEDGKPLSQVV+ AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKNIPLILMGCGGVGRQLLQHIVSCRSLHFTQGLCLRVVGVGDSKSLVVTEDLLHEGLNDGFLLELCRVKSVGESLLKLLDFGKCQAFVHPESQGKILEIAFQLGKKTGLVFVDCSASSDTVAVLKQAIGMGCCAVMANKKPLTSTMEDFKKLFIYPRRIRHESTVGAGLPVIASLNRIISSGDPVHQIIGSLSGTLGYVMSEVEDGKPLSQVVRDAKSLGYTEPDPRDDLGGMDVARKALI 242

HSP 2 Score: 197.593 bits (501), Expect = 1.341e-52
Identity = 108/139 (77.70%), Postives = 128/139 (92.09%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILAR+LG +I+L SI+IESLYP+EMGP  M+VE+FLN G++ LD +I++RV+KA+ NGNVLRYVCVI G+RC VGIQELPKNS LGRLRGSDNVLEIY+RCYS+QPLVIQGAGAGNDTTAAGVLADI+DIQDLFP
Sbjct:  238 RKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVEKAASNGNVLRYVCVIMGSRCEVGIQELPKNSPLGRLRGSDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLADIVDIQDLFP 376

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: V4LQL7_EUTSA (Homoserine dehydrogenase OS=Eutrema salsugineum GN=EUTSA_v10013841mg PE=3 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 3.250e-112
Identity = 179/242 (73.97%), Postives = 208/242 (85.95%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IP++LMGCGGVGR LLQHIVSCRSLHAK GV LRVVGVSDSKSL++  DV ++EL+D  L+EVCRVKS GS L+ +  LG  +V ++ ESR++   +  +LGKSTGLA+VDCSAS ETI +L + V+LGCCVVLANKKPLTST E YDK V + RRIRHESTVGAGLPVI+S+NRIISSGDP+HRIVGSLSGTLGYVMSE+EDGKPLSQVV++AK+LGYTEPDPRDDLSGMDVARK  I
Sbjct:    2 MKKIPVLLMGCGGVGRYLLQHIVSCRSLHAKMGVRLRVVGVSDSKSLVVPIDVLKEELNDEYLSEVCRVKSTGSPLTTLGGLGGYRVVNDPESRSETKALEELLGKSTGLAVVDCSASMETIELLLKAVDLGCCVVLANKKPLTSTMEHYDKLVLHLRRIRHESTVGAGLPVIASLNRIISSGDPVHRIVGSLSGTLGYVMSELEDGKPLSQVVQAAKTLGYTEPDPRDDLSGMDVARKALI 243

HSP 2 Score: 191.045 bits (484), Expect = 2.458e-50
Identity = 106/139 (76.26%), Postives = 123/139 (88.49%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILARLLGKR+ + SIKIESLYPE MGP  MSVE+FL  G+V+LD NIE RVK+AS NG VLRYVCVIEG+   VGI+E+PK+S LGRLRGSDN++EIYSRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLFP
Sbjct:  239 RKALILARLLGKRLIMDSIKIESLYPEAMGPGLMSVEDFLQNGIVKLDENIEGRVKRASSNGCVLRYVCVIEGSSVQVGIREVPKDSPLGRLRGSDNIVEIYSRCYEKQPLVIQGAGAGNDTTAAGVLADIIDLQDLFP 377

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: Q84JZ4_ARATH (Homoserine dehydrogenase OS=Arabidopsis thaliana GN=At5g21060 PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 9.936e-112
Identity = 174/239 (72.80%), Postives = 206/239 (86.19%), Query Frame = -3

Query: 1346 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARK 2062
            MK IP++LMGCGGVGR LLQHIVSCRSLHAK GVH+RV+GV DSKSL+   DV ++EL+D +L+EVC +KS GS+LSK+ +LG  +V  +SE  T+  +IA +LGKSTGLA+VDCSAS ETI +L + V+LGCC+VLANKKP+TST E YDK   +PR IRHESTVGAGLPVI+S+NRIISSGDP+HRIVGSLSGTLGYVMSE+EDGKPLSQVV++AK LGYTEPDPRDDL GMDVARK
Sbjct:    1 MKKIPVLLMGCGGVGRHLLQHIVSCRSLHAKMGVHIRVIGVCDSKSLVAPMDVLKEELNDELLSEVCLIKSTGSALSKLGALGGYRVVHDSELSTETEEIAKLLGKSTGLAVVDCSASMETIEILMKAVDLGCCIVLANKKPVTSTLEHYDKLALHPRFIRHESTVGAGLPVIASLNRIISSGDPVHRIVGSLSGTLGYVMSELEDGKPLSQVVQAAKKLGYTEPDPRDDLGGMDVARK 239

HSP 2 Score: 188.734 bits (478), Expect = 1.456e-49
Identity = 105/138 (76.09%), Postives = 122/138 (88.41%), Query Frame = -2

Query:  465 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLF 878
            ++ LILARLLGKRI + SIKIESLYPEEMGP  MSV++FL+ G+V+LD NIEERVKKAS  G VLRYVCVIEG+   VGI+E+ K+S LGRLRGSDN++EIYSRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLF
Sbjct:  238 RKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVKKASSKGCVLRYVCVIEGSSVQVGIREVSKDSPLGRLRGSDNIVEIYSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDLQDLF 375

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A059AC98_EUCGR (Homoserine dehydrogenase OS=Eucalyptus grandis GN=EUGRSUZ_J00623 PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.069e-111
Identity = 178/243 (73.25%), Postives = 203/243 (83.54%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLII-ASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK + L+LMGCGGVGRQLL+HIVSCRSLHA QGVHLRVVGV DSKSL++ A D    ELDD  L EVCRVK DGSSLSK++  G  +VF++SE   KV ++ S LG    LA+VDCSASSET  +L   ++LGCC+VLANKKPLT+T E YDK VS PRRIRHESTVGAGLP+I+S+NRI+SSGDP+HR+VGSLSGTLGYVMSEVEDGKPLSQVVK+AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKKMTLLLMGCGGVGRQLLRHIVSCRSLHATQGVHLRVVGVCDSKSLVVVAPDAHMLELDDKFLLEVCRVKEDGSSLSKLSGFGACRVFAHSELTAKVFNMVSHLG----LAVVDCSASSETTEILSRAIDLGCCIVLANKKPLTATMEYYDKLVSQPRRIRHESTVGAGLPIIASLNRILSSGDPVHRLVGSLSGTLGYVMSEVEDGKPLSQVVKTAKSLGYTEPDPRDDLGGMDVARKALI 239

HSP 2 Score: 193.741 bits (491), Expect = 2.287e-51
Identity = 105/139 (75.54%), Postives = 125/139 (89.93%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILARLLG+RI + SIK+ESLYP+EMGP  MSV++FL+ G+  LD +I +RV KAS++G VLRYVCVIEG RC VGIQELP++S LGRLRGSDNVLE+Y+RCY++QPLVIQGAGAGNDTTAAGVLADILDIQDLFP
Sbjct:  235 RKALILARLLGRRITMDSIKVESLYPDEMGPTVMSVDDFLSKGLPLLDTSICKRVAKASVSGKVLRYVCVIEGTRCEVGIQELPRDSPLGRLRGSDNVLEVYTRCYNKQPLVIQGAGAGNDTTAAGVLADILDIQDLFP 373

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: V7BLZ0_PHAVU (Homoserine dehydrogenase OS=Phaseolus vulgaris GN=PHAVU_006G009000g PE=3 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.070e-111
Identity = 172/242 (71.07%), Postives = 203/242 (83.88%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLGESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK IPLIL+GCGGVGRQLLQHIVSCRSLH+ QG+ LRVVGV D+KSL+++ D+  K LDD+ L ++CRVKS G SLSK+   GE +   + E + K+L+IAS LG+ TGL LVDCSAS +T+ VLK+ +++GCCVVLANKKPLTS+ ED+ K   YPRRIRHESTVGAGLPVI+S+NRII SGDP+H+I+GSLSGTL YVMSEVEDGKPLSQVVK AKSLGYTEPDPRDDL GMDVARK  I
Sbjct:    1 MKNIPLILLGCGGVGRQLLQHIVSCRSLHSTQGLCLRVVGVGDTKSLVVSDDLLHKGLDDSFLLQLCRVKSAGESLSKLCDFGECRAIVHPEPQGKILEIASQLGRKTGLVLVDCSASFDTVAVLKQAIDMGCCVVLANKKPLTSSMEDFKKLFMYPRRIRHESTVGAGLPVIASLNRIICSGDPVHQIIGSLSGTLAYVMSEVEDGKPLSQVVKDAKSLGYTEPDPRDDLGGMDVARKALI 242

HSP 2 Score: 182.57 bits (462), Expect = 1.932e-47
Identity = 100/138 (72.46%), Postives = 124/138 (89.86%), Query Frame = -2

Query:  465 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLF 878
            ++ALIL R+LG +I+L SI+IESLYP+EMGP+ M+V++FL+ G+  LD +I+ RV+KA+ NGNVLRYVCVIEG+RC VGI+EL KNS LGRLRG+DNVLEIY+RCYS+QPLVIQGAGAGNDTTAAGVL DI+D+QDLF
Sbjct:  238 RKALILTRILGHQINLDSIQIESLYPKEMGPDVMTVDDFLDRGLSLLDKDIQARVEKAASNGNVLRYVCVIEGSRCEVGIKELEKNSPLGRLRGNDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLVDIVDVQDLF 375

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Match: A0A0D3EDK0_BRAOL (Homoserine dehydrogenase OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.257e-111
Identity = 180/244 (73.77%), Postives = 210/244 (86.07%), Query Frame = -3

Query: 1337 MKIIPLILMGCGGVGRQLLQHIVSCRSLHAKQGVHLRVVGVSDSKSLIIASDVKQKELDDNILAEVCRVKSDGSSLSKITSLG--ESQVFSNSESRTKVLDIASILGKSTGLALVDCSASSETIGVLKEGVNLGCCVVLANKKPLTSTPEDYDKFVSYPRRIRHESTVGAGLPVISSINRIISSGDPIHRIVGSLSGTLGYVMSEVEDGKPLSQVVKSAKSLGYTEPDPRDDLSGMDVARKVQI 2062
            MK I +ILMGCGGVGRQLLQHIVS RSLHAK GVHLRVVGVSDSKSL +  DV ++ LDD++L+EVC +KS GS+L+ + +LG  E +VF+ SES  +  +IA +LGKSTGL +VDCSASSET+ +L + V+LGCCVVLANKKPLTST E YDK V  PRRIRHESTVGAGLPVI+S+NRIISSGDP+H IVGSLSGTLGYVMSE+EDG+PLSQVV++AK+LGYTEPDPRDDLSGMDVARK  I
Sbjct:    1 MKKISVILMGCGGVGRQLLQHIVSFRSLHAKMGVHLRVVGVSDSKSLAVPVDVLKEGLDDDLLSEVCSIKSAGSALTTLGALGKGEYRVFNGSESIRETEEIAQLLGKSTGLVVVDCSASSETVEILMKAVDLGCCVVLANKKPLTSTLEHYDKLVLDPRRIRHESTVGAGLPVIASMNRIISSGDPVHSIVGSLSGTLGYVMSELEDGRPLSQVVRAAKTLGYTEPDPRDDLSGMDVARKALI 244

HSP 2 Score: 184.111 bits (466), Expect = 6.688e-48
Identity = 102/139 (73.38%), Postives = 121/139 (87.05%), Query Frame = -2

Query:  462 KQALILARLLGKRIDLGSIKIESLYPEEMGPNKMSVEEFLNGGVVRLDNNIEERVKKASLNGNVLRYVCVIEGARCNVGIQELPKNSALGRLRGSDNVLEIYSRCYSQQPLVIQXXXXXXXXXXXGVLADILDIQDLFP 878
            ++ALILARLLGKRI + SIKIESLYPEEM P  M+V++FL  G+ +LD NIEERVK+AS NG VLRYVC+IEG+   VGI+E+ K+S LGRLRGSDN++EI SRCY +QPLVIQGAGAGNDTTAAGVLADI+D+QDLFP
Sbjct:  240 RKALILARLLGKRIVMDSIKIESLYPEEMRPGVMTVDDFLQNGIAKLDQNIEERVKRASSNGCVLRYVCMIEGSSVQVGIREVTKDSPLGRLRGSDNIVEIRSRCYKEQPLVIQGAGAGNDTTAAGVLADIIDMQDLFP 378

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 20


Match Name	E-value	Identity	Description
AKH1_MAIZE	1.285e-27	34.02	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
DHOM_YEAST	2.091e-26	32.14	Homoserine dehydrogenase OS=Saccharomyces cerevisi...	[more]
AKH_BUCAI	8.757e-26	30.20	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH_BUCAP	2.774e-25	29.27	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH_DAUCA	5.080e-25	32.50	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH_BUCBP	5.481e-25	28.93	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH2_MAIZE	7.549e-24	33.03	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AK1H_ECOLI	1.173e-23	32.17	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH2_ARATH	2.131e-23	34.17	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]
AKH1_ARATH	1.363e-22	32.71	Bifunctional aspartokinase/homoserine dehydrogenas...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097146 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
M4CDS1_BRARP	2.039e-113	74.18	Homoserine dehydrogenase OS=Brassica rapa subsp. p...	[more]
B7FM35_MEDTR	8.312e-113	73.14	Homoserine dehydrogenase OS=Medicago truncatula GN...	[more]
Q3S3F6_SOYBN	8.674e-113	71.90	Homoserine dehydrogenase OS=Glycine max PE=2 SV=1	[more]
A0A0B2S1G5_GLYSO	1.485e-112	71.90	Homoserine dehydrogenase OS=Glycine soja GN=glysoj...	[more]
C6TCU7_SOYBN	1.592e-112	71.90	Homoserine dehydrogenase OS=Glycine max PE=2 SV=1	[more]
V4LQL7_EUTSA	3.250e-112	73.97	Homoserine dehydrogenase OS=Eutrema salsugineum GN...	[more]
Q84JZ4_ARATH	9.936e-112	72.80	Homoserine dehydrogenase OS=Arabidopsis thaliana G...	[more]
A0A059AC98_EUCGR	1.069e-111	73.25	Homoserine dehydrogenase OS=Eucalyptus grandis GN=...	[more]
V7BLZ0_PHAVU	1.070e-111	71.07	Homoserine dehydrogenase OS=Phaseolus vulgaris GN=...	[more]
A0A0D3EDK0_BRAOL	1.257e-111	73.77	Homoserine dehydrogenase OS=Brassica oleracea var....	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.360.10		coord: 193..242 e-value: 8.6E-23 score: 80.5
None	No IPR available	PANTHER	PTHR21499	ASPARTATE KINASE	coord: 1..239
None	No IPR available	PANTHER	PTHR21499:SF33	HOMOSERINE DEHYDROGENASE	coord: 1..239
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..242
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	SUPERFAMILY	55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	coord: 171..242
IPR001342	Homoserine dehydrogenase, catalytic	PFAM	PF00742	Homoserine_dh	coord: 171..242 e-value: 1.7E-21 score: 76.8
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 1..192 e-value: 1.5E-51 score: 174.5
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..190
IPR019811	Homoserine dehydrogenase, conserved site	PROSITE	PS01042	HOMOSER_DHGENASE	coord: 217..239

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097146 ID=g.barbadense_cottongen_reftransV1_0097146; Name=g.barbadense_cottongen_reftransV1_0097146; organism=Gossypium barbadense; type=contig; length=2253bp
GGTAATTATACTAATAAATTTGTCAAATCTTGATACCACCCATAAAAGTA
ATTCGTGTCATGTTTTTATTGAATGGTGTACATTTATTTAGGGGTAAAAT
AAGATATTTGATAATTAAGAGGCTCTAAAATACCTAAATGGGAAAATCGA
TATAGCTTGGGGGACAATTTTGTAGTTATTCCTTTTTCTTTTCTCTTTTT
AAGCTTTAGGTTTTCAAGAAACTAAGCTGACATAAAGTTTATTACGTATG
CAGGTTCTTCAAAAACTGAAGGGGACGCTTAGTCAGAGCCATGGGCGCTT
TGCACATTGTTTACCATGGAACATCCCCCGACAACATTCAGTAAGCTTGC
TCCGGACCAAAAATTATTCAGACATTCGAAAACTTCGAGTCTCTTAGCTT
CATTTTTGTAGGTGAAATACATGGCAAACTCGAGTTGTGTGACTCCCTCG
AATTTCTTTCAGGGAAACAGATCCTGAATGTCAAGGATATCAGCAAGCAC
GCCGGCTGCAGTAGTATCATTCCCAGCTCCCGCGCCTTGAATAACTAAGG
GTTGTTGACTATAGCATCGACTATATATTTCTAGCACATTGTCACTTCCC
CTCAGTCTTCCCAAAGCCGAATTCTTAGGAAGTTCTTGAATCCCGACATT
GCACCTTGCACCTTCTATCACGCAGACATAACGGAGGACATTCCCATTGA
GTGAAGCTTTTTTAACTCTCTCTTCGATATTGTTATCAAGCCTTACAACA
CCTCCATTCAAAAATTCTTCAACAGACATCTTATTAGGTCCCATTTCTTC
GGGATACAAGCTCTCAATCTTTATGCTACCTAAGTCAATGCGCTTCCCAA
GAAGTCGGGCAAGGATCAAAGCCTGTTTCAGAAAACTGAAACTACATGAC
ACATACTCGAAGCAATAATTAAAATTCCATAGTAACAAAATCAAATTCAC
TGCAGAATATTGATGCAAGTATGAAAGTCCATTTCATCACTTATAAATAA
AATATGTGATGGTGACTATCACTAATTCCAACTATAATCCATGAGTCTAA
GTATAAATCGATTTATGCATCAAGGGTTCCAGCCATTAGCAGAATTTATA
TGTTTAGGCCAAACCGAGTCATAGTAGTTTTCCTATGCAAAGACAACAAT
GGCTATTTAGTATTTATGCCTATGTTATATATATTTTACACATTTCTGTT
ATCATCGAACAGTAAACATCCAAATTGTTCTCAAGTTTACCATGCAAAAG
TTACTAATATTTAGAGACAGTTTATATTGATAAATGCAATGCATGCAATT
TATATCTGAGTAATCAAGAACATGGGAACATATTCATATTTGAACCTTCC
TGGCAACATCCATTCCACTGAGGTCATCTCGTGGATCTGGTTCAGTGTAT
CCTAAGCTTTTAGCAGACTTAACGACTTGGCTCAATGGTTTGCCATCTTC
AACCTCACTCATTACATAACCCAATGTACCGCTTAAACTTCCAACAATAC
GGTGGATGGGGTCTCCAGATGAAATTATGCGATTTATTGATGATATGACT
GGCAGACCAGCGCCAACAGTTGACTCATGCCGTATGCGGCGAGGATATGA
AACAAATTTGTCATAATCCTCCGGTGTTGATGTAAGAGGTTTTTTATTTG
CTAGAACAACACAGCAACCCAAGTTGACCCCTTCCTTTAGCACTCCAATC
GTCTCAGAACTGGCCGAGCAATCTACAAGGGCTAAACCTGTTGATTTTCC
AAGAATTGATGCAATGTCTAGCACTTTTGTCCTTGATTCTGAATTGGAGA
ACACTTGAGACTCACCTAAGCTAGTAATTTTGGACAATGAAGAACCATCT
GATTTTACCCTACAAACTTCAGCTAAAATGTTATCATCCAACTCTTTTTG
TTTAACATCTGATGCAATGATTAGTGATTTGCTATCAGATACTCCCACAA
CTCGTAAATGAACTCCCTGCTTGGCGTGAAGTGATCTGCAGGAAACAATG
TGTTGGAGGAGTTGGCGTCCAACACCTCCACAACCCATCAAAATTAAAGG
GATGATCTTCATCGTTTTGCTTTGTTGTTGATATTTCTGGTTTTTTGGGT
TTTCCTGTTATGAATCGAAAACTTTTGGGAAATTTTATACTGAATCGATA
AAAACAGTGGACACTGGGGATTGAAAAGAGAGTATTTTCGCAAAGTACCT
TCCCTACTCCTTTGATGGCTTTTAGTTAATTGGGTTAATATCGGTAAAAT
TCA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001342	HDH_cat
IPR016040	NAD(P)-bd_dom
IPR019811	HDH_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006520	amino acid metabolic process
GO:0055114	obsolete oxidation-reduction process

Search form

g.barbadense_cottongen_reftransV1_0097146, g.barbadense_cottongen_reftransV1_0097146 (contig) Gossypium barbadense

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