g.barbadense_cottongen_reftransV1_0097138, g.barbadense_cottongen_reftransV1_0097138 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 2.289e-135 Identity = 223/591 (37.73%), Postives = 348/591 (58.88%), Query Frame = -3 Query: 591 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRV-RPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERN--IGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETK-EKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2351 A++ F + + +N++I G + + ++ F MLR + PD+ T VL + A L +G +H I+ +G + V +L+ MY + G +E A L E ++ I + + ++G +K GD+N+A +F +K++DVV+WT ++ G Q+G + +A+++F M+ G RPN TL + LS + + +L G +IH V++G + + + AL+ MYAK GNI SAS+ F+ + E+D +W+ MI A HG +A+ F+ M+ G++PD + ++ + +AC+H+G V+ G +FD M+ I PT+ HY +VDL GRAG L EA +FI++MPI PD V WG+L ACR HKNI + ++ +E+LL LEP++ G+Y L+N+Y+A G+WE+ ++R M++ V K+ G+S+IEV +VH F D H EIY+ +++I ++ GY+P+T VLH++EEE KE L HSEKLA+AF L++T TT+RI+KNLRVC DCH+ +K SK+ REII+RD RFHHFK G CSC DYW Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY-----------------------------------SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786 HSP 2 Score: 138.658 bits (348), Expect = 2.708e-32 Identity = 89/312 (28.53%), Postives = 148/312 (47.44%), Query Frame = -3 Query: 1347 KSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKV-------------------------------FEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMF-SGIKPDAVVFLALLTACSHSGQVDLG 2186 KSV RF ++H R+IKSG+ F S+ L N L+N K G A +LF+ MP R SWN+ ++ K GD++ + FD++ ++D VSWTT++ G G + KA+ + M++ G+ P TL + L++ A +E G ++H++ V+ GLR N + + +L++MYAKCG+ + A V FE+ E+DI TW+ MI G+ G+ +A+ F KM+ S + PD ++L+AC++ ++ +G Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMF-----------------------------------SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298 HSP 3 Score: 137.887 bits (346), Expect = 4.817e-32 Identity = 115/449 (25.61%), Postives = 186/449 (41.43%), Query Frame = -3 Query: 1101 FNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVG-LRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEET---------------------------------KEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLR--LEPKH 2339 F+ + + +I G + ++ M+++ + P + T VL SVA G +H I+K G+ + V SL+ MY K + A VFD R+ S WN +I +VG ++ AM FE M ER+I +WNS I+G +Q G +AL +F KML L P+ TL S LSACA + L G +IH++ V G ++ AL+ MY++CG + +A ++ E+ K++D+ W+ MI G+ HG YG+AI F+ M+ G +P++ A+L+ S + G S I L+ + +AG + A + + D V+W ++ A H + + A + E +L L P H Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS----WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF-------------------------------NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT-MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 426.402 bits (1095), Expect = 1.160e-134 Identity = 213/529 (40.26%), Postives = 326/529 (61.63%), Query Frame = -3 Query: 591 GLILHGRIIKSGVEFDSFVR------VSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSG-IKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLK-LEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2153 GL GR+ ++ FD ++V Y + + A ++FD PE+ + + W ++ G + G +E A ELFE MP + + + N+ I+GL + G++ KA ++FD MKE++ SW T++ +NG +AL +F M + G+RP TL+S LS CA + +L G ++H V ++ A+ L+ MY KCG ++ + +F+ KDI W+ +I G+A HG +A++ F +M SG KP+ V F+A L+ACS++G V+ GL ++SM + ++P HY +VD+LGRAGR +EAM+ I M + PD WG+L ACR H + +AE ++KL+ +EP++ G+Y+ LSN+YA+ GRW DV +R LM+ + V K PG S+ EV +VH+F G + +E LK L+E+ RE GY P+ + LH+++EEEK ++L HSE+LA+A+AL+ S G IR++KNLRVC DCH+ +K SK+ +REIILRD RFHHF+ G CSC DYW Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705 HSP 2 Score: 108.227 bits (269), Expect = 7.677e-23 Identity = 88/361 (24.38%), Postives = 161/361 (44.60%), Query Frame = -3 Query: 1110 VRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKM----------MFSG------------------IKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMK---FIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLE 2099 VR++ + K+ E A ++FD S+SI WN ++ G A +LF+ MP+RNI SWN ++G MKNG++++A ++FD M E++VVSWT +V G NG A S+F+KM E N ++ L + G ++ +++ + + +++ K G + A ++F+E E+ + TW+ M+ G+ + A + F M M G +KP + A+++ G++ FDSM+ E + V+ + R G EA+ +Q+ + P F ++ C + ++ + V +L+R + Sbjct: 22 VRITHLSRIGKIHE---ARKLFDSC----DSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKGEIAKARRVFDSMK-----ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361 HSP 3 Score: 90.1225 bits (222), Expect = 3.876e-17 Identity = 75/337 (22.26%), Postives = 142/337 (42.14%), Query Frame = -3 Query: 978 NVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYI 1988 NV I ++G + +A +LF++ ++I SWNS + G N A +LFDEM +++++SW +V+G +NG+ +A +F M E N + ALV Y G + A +F + EK+ +W+VM+ G+ G A + ++ + D + +++ G+VD FD M E ++ +T +V G+ R+D+A K MP + V+W ++ + I+ A E+L + P P + + + + +G+ ++ + R + + D W + Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE---------------------------------------RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNGRIEDA----EELFEVMPVKP--VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302 HSP 4 Score: 65.855 bits (159), Expect = 1.438e-9 Identity = 64/292 (21.92%), Postives = 131/292 (44.86%), Query Frame = -3 Query: 1506 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMP-----ERNIGSWNSFINGLMKNGDLNKAMQLFDEMKE----KDVVS-WTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIR 2351 A +F+ ++ + +I+ N ++ F+LM +Q VRP T +L A L G +H ++++ + D +V L+ MY+K E+ + +FD P S+ I++WN +I+G G E+A+++F MP + N ++ + ++ G + + +++++ M+ K + + + +V+ + + G +A+ M M + P+ S L AC L+ +E N T L +MYA G +++ + K + +R Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP----SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE-NSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 422.55 bits (1085), Expect = 4.171e-133 Identity = 240/697 (34.43%), Postives = 383/697 (54.95%), Query Frame = -3 Query: 591 QLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGL-GLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFAL---QVFDESPERN--------KSESILL---------------------WNVLINGCCKVGNLEKAMELFEAMPERN-----------------------------------------IGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2459 Q +Q+HAQ +R S S +++IS+ ++LK + AL +F + + ++IR T+ S F +++ F+ M PD FP VLKS + LRF G +HG I++ G++ D + +L+ MY KL MG + VFDE P+R K+E+ ++ +N +I G + G E A+ + M + IGS S ++ K+ + + ++F + +D +SW ++V G QNG + +AL +F +M+ ++P + S + ACA + L G ++H Y + G N A+ALVDMY+KCGNI +A K+F+ D +W+ +I G A+HG +A+ F++M G+KP+ V F+A+LTACSH G VD +F+SM Y + ++HY V DLLGRAG+L+EA FI +M + P W L +C HKN+++AE V+EK+ ++ ++ G+YV + N+YA+ GRW+++ ++R+ M+ + + K P S+IE+ + H FV+GD H +I L+ ++ ++GY+ +T VLH+++EE K + L HSE+LA+AF ++NT PGTTIR+ KN+R+C DCH +K SK+++REII+RD RFHHF G CSCGDYW Sbjct: 23 QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF-GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS--SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 1.418e-132 Identity = 230/624 (36.86%), Postives = 341/624 (54.65%), Query Frame = -3 Query: 591 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQR-VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAM----------------P----------------ERNIGSWNSFINGLM----KNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2351 A +F+ K L+N +I G +N + S+ F ++ + R D T +L +VA L LG+ +H K+G +V + +Y K ++ +F E + I+ +N +I+G G E ++ LF+ + P + N S S L K ++ A +LFDE EK + SW +++G +QNG + A+S+F +M + PN +T+ LSACA++GAL G +H+ + + AL+ MYAKCG+I A ++F+ +K+ TW+ MI G+ +HG +A+ F +M+ SGI P V FL +L ACSH+G V G F+SM Y EP++KHY +VD+LGRAG L A++FI+ M I P W L ACR HK+ +A VSEKL L+P + G +V LSN+++A + VR + + + K PG++ IE+ H F +GD H + +EIY KLE++ RE GY PET LH++EEEE+E + HSE+LA+AF L+ T PGT IRI+KNLRVC DCH++ K SK+++R I++RD RFHHFK GVCSCGDYW Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF----RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792 HSP 2 Score: 158.303 bits (399), Expect = 1.548e-38 Identity = 131/517 (25.34%), Postives = 234/517 (45.26%), Query Frame = -3 Query: 1065 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQR-VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNK----------------SESILLWNVLINGCCKVGNLEKAMELFEAMPE--------------RNIGSWN------SFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYA 2504 K + K + + L Q HAQI+ + +L T L S L +I YA IF +FLFN L+RG + N SS+S F + + ++P+ T+ F + + +G G ++HG+ + G + + + ++V+MY K + A +VFD PE++ ESI ++ LIN C + +++ A+ E G ++ FI+ K G + LF E ++ D+V++ +++G + NG+ + +LS+F +++ G R TLVS + + + A IH Y +++ + + + AL +Y+K I SA K+F+E+ EK + +W+ MI G+ +G AI F++M S P+ V +L+AC+ G + LG D +R E ++ T ++ + + G + EA + M + V W + H + A + ++L P FL +YA Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR-STDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPTPVTFLCVLYA 530
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 1.543e-132 Identity = 211/576 (36.63%), Postives = 329/576 (57.12%), Query Frame = -3 Query: 591 LFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEE-EKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2315 L +NA+I G +Q ++ M+ + D+ T+P V+++ A GL LG +H +++ +F SLV +Y K G ++A +FE MP +++ SWN+ ++G + +G + +A +F EMKEK+++SW +++G+++NG ++ L +F M G P D A+ +CA +GA G + H ++ G + + AL+ MYAKCG + A +VF D +W+ +I HG +A+ +++M+ GI+PD + L +LTACSH+G VD G +FDSM Y I P HY ++DLL R+G+ +A I+ +P P W AL CR H N+++ + ++KL L P+H G+Y+ LSN++AA G+WE+V RVR LM+++ V K+ S+IE+ QVH+F+ D H A +Y+ L+++ R GY+P+T +VLH++E + KED L +HSEK+A+AF LM PGTTIRI KNLR CGDCH+ + S + QR+IILRD KRFHHF+ G CSCG++W Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK-----------------------------------CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790 HSP 2 Score: 123.635 bits (309), Expect = 1.486e-27 Identity = 110/440 (25.00%), Postives = 190/440 (43.18%), Query Frame = -3 Query: 1116 KSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGL----RFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEE----MGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFV---------ENGL--------RLNKATAA-------------ALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLR 2321 + ++NA+I G + N+ S+++ F M + +PD TF VL AGL L + H +KSG + + V +LV +Y K + A +VFDE E+++ W ++ G K G + EL E M D MK +V++ +++G G +Q+AL M +M+ G+ ++ T S + ACA G L+ G ++H Y + +N L + ++A A AL+ Y G+I A +F+E KEK+I +W +MI G A +GF + ++ F M G +P F + +C+ G G + + + ++ ++ + + G ++EA + + MP D V+W AL A H + A V E++L+ Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERS----WTTMMTGYVKNGYFDLGEELLEGMD---------------------------DNMK---LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL-LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511 HSP 3 Score: 120.168 bits (300), Expect = 2.055e-26 Identity = 99/387 (25.58%), Postives = 174/387 (44.96%), Query Frame = -3 Query: 1122 LGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMP--ERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAG-VRIHNYFVENGLRLNKATAAALVDMYAKCGN----ILSASKVFEETKEKDIRTWSV--------------------------------MIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLG--LNFFDSMRFDYSIEPTMKHY-TLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKL 2156 L +HG II G + + + L+++Y K E+ +A Q+FDE E +K + +++G C G++ A +FE P R+ +N+ I G N D A+ LF +MK + G +P++ T S L+ A + E V+ H +++G + + ALV +Y+KC + + SA KVF+E EKD R+W+ MI G+ GFY +A+ ++M+ SGI+ D + +++ AC+ +G + LG ++ + R D+S H+ +V L + G+ DEA ++MP + D V+W AL + +I A+L+ +++ Sbjct: 32 LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK----IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE-------------------------------GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377 HSP 4 Score: 73.9442 bits (180), Expect = 4.299e-12 Identity = 72/297 (24.24%), Postives = 116/297 (39.06%), Query Frame = -3 Query: 1467 IFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYF--VENGLRLNKATA--AALVDMYAKCGNILSASKVFEETKEKDI-RTWSVMIWGWAIHG 2342 IF K++ + +I GL EN + + F M R+ P F +KS A LG G H +++K G FDS S+ N LI K G +E+A ++F MP + SWN+ I L ++G +A+ +++EM +K G+RP+ +TL++ L+AC+ G ++ G + YF +E R+ A L+D+ + G A V E K W ++ G +HG Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG--FDS---------------------------------SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK-------------------------------GIRPDRITLLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: F6HIU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g01390 PE=4 SV=1) HSP 1 Score: 533.487 bits (1373), Expect = 3.343e-174 Identity = 274/669 (40.96%), Postives = 405/669 (60.54%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSS-SANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNK---------------------------SESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQ-GYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P SL +T L+Q+HAQI+ H S + L ++S + YA +IF+H + L+N+LIR L+ + ++ + ML+ ++PD +T+PFV+K+ + + GL++H ++KSG E DS++ SL+ +Y +++G A Q+F+ R+ ++ WN +ING VG +++A LF+ MPERN+ SWNS + G +K G++ A LF EM +DVVSW +++ +Q G +AL++F +M VG++P + T+VS LSACA +GAL+ G+ +H Y +N + +N ALVDMYAKCG I A++VF + KD+ W+ +I G AIHG +A + FK+M +G++P+ + F+A+L+ACSH+G VD G D M Y IEP ++HY V+DLL RAG L+EAM+ I MP+ P+ A GAL CR H N ++ E+V ++L+ L+P H G Y+ LSN+YAA +W+D +VR LM+ + K PG S IE+ G VH FVAGD H + +IY KL EI + + GY +TG VL ++EEE+KE AL HSEKLA+A+ L++ IRIVKNLRVC DCH ++K SK+ REII+RD RFHHF+ G CSC D+W Sbjct: 12 PSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 680
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: M5W3D3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb025182mg PE=4 SV=1) HSP 1 Score: 526.939 bits (1356), Expect = 8.943e-172 Identity = 260/590 (44.07%), Postives = 375/590 (63.56%), Query Frame = -3 Query: 591 YALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEA-MPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKML-EVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2354 +AL +F+ ++F++N +I+G EN+ S +S++ M+ RP+K T+ + K+ + L +H ++K+ D +R + ++MY + A ++ DE+ E N ++ N +I+G K G++E A ELFE MP +N+GSWN+ ++GL + G L +A +LFD M EKD +SW+ +V+G + G H++AL +F +M E L P L S L+ACA +GA++ G +H Y N ++L+ AAL+DMYAKCG + A +VFE K+K+I TW+ MI G A+HG AI F KM S ++P+ V FL +L AC+HSG VD GLNFF SM+ Y IEP ++HY +VD+ GRAG+L+EA + I MPI P+ GAL ACR H N +M E V LL LEP++ G Y LSN+YA GRW+D E+VRMLM+ + V PG S +++ G VH F G+ H + +E+YL LE I+ + +GY P + VL +I EEEKE AL HSEKLA+AF ++NT PGTTIR+ KNLR C DCHS +K SK+ +R+II+RD R+HHF+ G CSC D+W Sbjct: 86 FALKVFDSVWRPNVFVWNIVIKGCLENNEALSCISYYCKMVAMNARPNKFTYSILFKACTLVQAVEEALQIHAHVVKNQFGEDGHIRSAGIQMYASFGLVEEARRMLDEAAELN---DVICSNAMIDGYMKCGDVEAAKELFEKHMPSKNVGSWNAMVSGLARCGMLKEARELFDGMSEKDEISWSAMVDGYIKRGCHKEALEIFNEMQKENLLSPRKFILSSVLAACANMGAVDQGKWVHAYIKRNTIQLDAVLGAALLDMYAKCGRLDMAWEVFENIKQKEISTWNAMIGGLAMHGRADDAIELFSKMQRSKLEPNGVTFLNVLNACAHSGFVDKGLNFFSSMKQFYGIEPEVEHYGCMVDMFGRAGQLEEAEQLINSMPIKPNAAVLGALLGACRIHGNAEMGERVGRILLELEPQNSGRYALLSNIYAKAGRWDDAEKVRMLMKERGVKTSPGISMVDIGGMVHEFKVGEGSHPQMKEVYLMLETIIEKLQMEGYSPNSSQVLFDIAEEEKETALQYHSEKLAIAFGVLNTKPGTTIRVTKNLRTCEDCHSAIKIFSKVYERDIIVRDRMRYHHFRNGRCSCKDFW 672
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A0A0LE51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895070 PE=4 SV=1) HSP 1 Score: 525.783 bits (1353), Expect = 2.211e-171 Identity = 265/592 (44.76%), Postives = 383/592 (64.70%), Query Frame = -3 Query: 591 YALSIFNHS-HHKSLFLFNALIRGLTENSHFQSSVSHF--LLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKML-EVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2354 +++ IFNH ++F +NAL++ ++++ + +++S+F L+L PD+ TF VLK+ AGL G +H + K G E + FVR SLV++Y K+ A ++FDE R+ ++ WN LI+G C G ++KA +F+ M E+N+ SW++ I+G + G+L +A QLF+ M ++VVSW ++ G +QN + A+ +F +M E GL PND+TLVS LSACA +GAL+ G IH + N + + AL DMYAKCG +L A VF E E+D+ +WS++I G A++G+ +A F +M+ G++P+ + F+ LLTAC+H+G VD GL +FD M Y I P ++HY VVDLL RAGRLD+A I MP+ P+ + WGAL CR +K+ + E V ++L L+ H GS V+L+NVYA++GR +D R+ M++ K PG S+IE+N V+ F GD H ++ IY + E+ + GY P+T V+HNI+EEEKEDAL +HSEKLALAF L+NTS GTTIRIVKNLRVC DCH +K SK+ +REI++RD RFHHFK G CSC DYW Sbjct: 76 HSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRD----VVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 663
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: V4U4U3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004495mg PE=4 SV=1) HSP 1 Score: 514.998 bits (1325), Expect = 4.209e-170 Identity = 266/418 (63.64%), Postives = 327/418 (78.23%), Query Frame = -3 Query: 1251 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGR 2504 +TH SLI S+ +T QLRQIHAQI+ +L +S+ +TT LIS +S KS YALSIF H K+L +FN LIRGL ENSHFQS +SHF+ MLR VRP++LT+PFV KSVA L L LG LH I+KSGVE+D+FVRV L +MYV+L + A +VFDE+PE+NKSES+LLWNVLINGC K+G L KA+ELF MP++N+ SW S I+G M+ GDL KA +LF++M EK VVSWT ++NG SQNG+ +KAL+MFF+ML+ G+R ND T+VSALSACAK+GALEAGVR+HNY N L A ALVDMYAKCGNI +AS VF ETKEKD+ TW+ MIWG AIHG Y QAI+ FKKMM+SG +PD VFLA+LTAC +SGQV L LNFFDSMRFDY IEP++KH+T+VV+LL R G+ Sbjct: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSTDYALSIFGHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ 448
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A067K574_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11623 PE=4 SV=1) HSP 1 Score: 515.768 bits (1327), Expect = 9.013e-168 Identity = 270/638 (42.32%), Postives = 393/638 (61.60%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSS--ANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRV-RPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEE-TKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAR-EQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 SL+ S ++ L+QIHA +L+ L + LL S S+ YA S+F H+ + +F++N LIRGL E+ Q+S+ F+ M R+ + PD +F F+LK+ A L G+ LH + + G+ FV +L+ MY + + + VF+E + N ++ WN +I C G+++ A ++F+ MP RN+ SWN + G +K G+L A ++F EM KD VSW+T++ G + NG +A F ++ G RPN+++L LSACA+ GA E G +H + V+ GL + AL+D Y+KCGN+ A VFE K+K I +W+ M+ G+A+HG QAI+ F +M SG +PD + F+ LL ACSH+G VD G +F+ M Y I+P ++HY +VDL GRAG+L +A +F+ +MPI P+ V W L AC H ++K+AE V E+L L+P + +V LSNVYA G+W+DV VR M +Q + K PGWS IEV+ +++FVAG K E Y KL++++ R E GY PE G VLH+IEEEEKED++ HSEKLA+AF + G TIR+VKNLR+C DCH +MK S++ + EI++RD RFH F G CSCGDYW Sbjct: 10 SLLNSCKSLTSLKQIHANVLKNGLDTDPFVAGKLLLHCTISLSDSLDYACSLFRHTPNPDVFMYNTLIRGLAESDKPQNSIFTFVEMRRESLFTPDSFSFAFILKAAANLRSLRTGVQLHCQALTHGLNTHIFVGTTLISMYGECGSVELSRNVFEEMLQPN----VVAWNAVITACFNGGDVKGAKQMFDLMPLRNLTSWNVMLAGYVKTGELELARKMFVEMPVKDDVSWSTMIVGFAHNGCFDEAFEFFRELQREGTRPNEVSLTGVLSACAQAGAFEFGKILHGFIVKAGLDWIVSVNNALLDTYSKCGNLCLAQLVFERMPKKKSIVSWTSMMAGFAMHGHGEQAIKLFHEMESSGTRPDGITFILLLYACSHAGLVDQGCEYFNKMMDHYDIKPAIEHYGCMVDLYGRAGQLQKACEFVYQMPIPPNDVIWRTLLGACSIHGDVKLAEQVKERLSELDPNNSSDHVLLSNVYAVAGKWKDVATVRRSMSDQRIKKTPGWSMIEVDKVMYTFVAGAKQDKITEEAYEKLKDVMFRLRVEGGYAPEIGCVLHDIEEEEKEDSMSMHSEKLAVAFGIARLREGKTIRVVKNLRICRDCHVVMKMISQVYKLEIVVRDRSRFHSFIDGSCSCGDYW 643 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097138 ID=g.barbadense_cottongen_reftransV1_0097138; Name=g.barbadense_cottongen_reftransV1_0097138; organism=Gossypium barbadense; type=contig; length=2716bpback to top |