g.barbadense_cottongen_reftransV1_0097138, g.barbadense_cottongen_reftransV1_0097138 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 443.351 bits (1139), Expect = 9.375e-143 Identity = 236/599 (39.40%), Postives = 348/599 (58.10%), Query Frame = -3 Query: 591 YALSIFNHSHHK-SLFLFNALIRGLTEN---SHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKML-----EVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEET-KEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFS-GIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2354 YA IF+ H K FL+N +IR + N S +S +L M RV PD TFPF+L S LG H +I+ G++ D FVR SL+ MY + C G+L A +F+ +++ +WNS +N K G ++ A +LFDEM E++V+SW+ ++NG G +++AL +F +M E +RPN+ T+ + LSAC ++GALE G +H Y + + ++ AL+DMYAKCG++ A +VF +KD++ +S MI A++G + + F +M S I P++V F+ +L AC H G ++ G ++F M ++ I P+++HY +VDL GR+G + EA FI MP+ PD + WG+L R +IK E ++L+ L+P + G+YV LSNVYA GRW +V+ +R M+ + + K PG SY+EV G VH FV GD + + IY L+EI+ RE GY+ +T VL ++ E++KE AL HSEKLA+AF LM T PGT +RI+KNLR+CGDCH +MK SK+ REI++RD RFHHF+ G CSC D+W Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY--------------------------------SSC---GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 449.514 bits (1155), Expect = 1.348e-142 Identity = 234/610 (38.36%), Postives = 354/610 (58.03%), Query Frame = -3 Query: 591 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHF-----------------LLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDS------FVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2351 A S+F+ K+ +NAL+ +NS + + F + ++ V + ++ V G G+I ++ FD F ++V Y++ + A ++FD+ PERN+ + WN ++ G + +E A ELF+ MP RN+ +WN+ I G + G +++A LFD+M ++D VSW ++ G SQ+G +AL +F +M G R N + SALS CA + ALE G ++H V+ G AL+ MY KCG+I A+ +F+E KDI +W+ MI G++ HGF A+R F+ M G+KPD +A+L+ACSH+G VD G +F +M DY + P +HY +VDLLGRAG L++A ++ MP PD WG L A R H N ++AE ++K+ +EP++ G YV LSN+YA+ GRW DV ++R+ M+++ V K PG+S+IE+ + H+F GD H EI+ LEE+ ++ GY+ +T VLH++EEEEKE + HSE+LA+A+ +M S G IR++KNLRVC DCH+ +K ++++ R IILRD RFHHFK G CSCGDYW Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 125.946 bits (315), Expect = 3.082e-28 Identity = 88/321 (27.41%), Postives = 154/321 (47.98%), Query Frame = -3 Query: 1173 RIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCA 2135 R+ K + S ++ Y++ E A ++FDE PER+ ++ WNV+I G + NL KA ELFE MPER++ SWN+ ++G +NG ++ A +FD M EK+ VSW +++ QN ++A M FK E + LVS + V +F +R + + ++ YA+ G I A ++F+E+ +D+ TW+ M+ G+ + +A F KM + + V + A+L ++++ FD M + + ++ + G++ EA +MP D V+W A+ Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERD----LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC-MLFKSRE------NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPC-----RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383 HSP 3 Score: 90.8929 bits (224), Expect = 2.529e-17 Identity = 70/287 (24.39%), Postives = 130/287 (45.30%), Query Frame = -3 Query: 1140 WNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIK-PDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLG--RAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAE 1991 WNV I+ + G +A+ +F+ MP + S+N I+G ++NG+ A +LFDEM E+D+VSW ++ G +N + KA +F M E + + + LS A+ G ++ + + E N + AL+ Y + + A +F K W+++ W + GF + + F + D V + ++T + SG++D FD P +T + G + ++EA + +MP + V+W A+ + ++MA+ Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLF-----KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAK 332
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 441.81 bits (1135), Expect = 1.242e-141 Identity = 235/611 (38.46%), Postives = 338/611 (55.32%), Query Frame = -3 Query: 591 FNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGS------------------W---------------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2306 +N +R L S F S+S + MLR PD +FPF+LKS A L L G LH + K G E + FV +L+ MY K + A +VF+E+P+ S+ + +N LI+G + A +F M E + W NSFI MK G + +LFDEM K +++W +++G SQNG L ++ +M G+ P+ TLVS LS+CA +GA + G + NG N + A + MYA+CGN+ A VF+ K + +W+ MI + +HG + F M+ GI+PD VF+ +L+ACSHSG D GL F +M+ +Y +EP +HY+ +VDLLGRAGRLDEAM+FI+ MP+ PD WGAL AC+ HKN+ MAEL K++ EP + G YV +SN+Y+ E + R+R++M+ +A K PG+SY+E G+VH F+AGD H++ E++ L+E+ E M E + EE HSE+LA+AF ++N+ PGT I ++KNLRVC DCH +K SK+ R+ ++RD RFH+FK GVCSC DYW Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQ--SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL-----ETSVM-ELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 1.320e-141 Identity = 239/633 (37.76%), Postives = 355/633 (56.08%), Query Frame = -3 Query: 591 LRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI----GSWNSFINGLMKNGDLN--KAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNT-----SPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2456 LR +H++I+ L +++L L+ +SLK + A +F+ +++ + N +IR N + V F M VRPD TFP VLK+ + G +G +HG K G+ FV LV MY K + A V DE R+ ++ WN L+ G + + A+E+ M I G+ S + + N +F +M +K +VSW ++ +N +A+ ++ +M G P+ +++ S L AC AL G +IH Y L N AL+DMYAKCG + A VFE K +D+ +W+ MI + G A+ F K+ SG+ PD++ F+ L ACSH+G ++ G + F M Y I P ++H +VDLLGRAG++ EA +FIQ M + P+ WGAL ACR H + + L ++KL +L P+ G YV LSN+YA GRWE+V +R +M+++ + K+PG S +EVN +H+F+ GD H ++ EIY +L+ +V +E GY+P++ LH++EEE+KE L HSEKLA+ FALMNT TIRI KNLR+CGDCH K S+++ REII+RD RFH F++GVCSCGDYW Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD----VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 446.432 bits (1147), Expect = 4.744e-140 Identity = 242/632 (38.29%), Postives = 364/632 (57.59%), Query Frame = -3 Query: 591 KSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSG-VEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPE----------------------------------------RNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKM--LE---------VGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFV---AWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2321 + L +N ++ L +N ++ + M+ + V PD+ T VL + + L + G LH +K+G ++ +SFV +LV+MY +++ +VFD +R I LWN +I G + + ++A+ LF M E R+ N+ ++ + G ++ AM++F +M+++D+V+W T++ G + H+ AL + KM LE V L+PN +TL++ L +CA + AL G IH Y ++N L + A +ALVDMYAKCG + + KVF++ +K++ TW+V+I + +HG +AI + MM G+KP+ V F+++ ACSHSG VD GL F M+ DY +EP+ HY VVDLLGRAGR+ EA + + MP DF AW +L A R H N+++ E+ ++ L++LEP YV L+N+Y++ G W+ VR M+ Q V K+PG S+IE +VH FVAGD H ++ ++ LE + R++GY+P+T VLHN+EE+EKE L HSEKLA+AF ++NTSPGT IR+ KNLRVC DCH K SK+ REIILRD++RFH FK G CSCGDYW Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK----IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP--RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 147.517 bits (371), Expect = 6.607e-35 Identity = 122/447 (27.29%), Postives = 200/447 (44.74%), Query Frame = -3 Query: 1104 LIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSF-VRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI------------------------------------GSWNSF-INGLM----KNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENG-LRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFS-GIKPDAVVFLALLTACSHSGQVDL-----GLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPK 2297 L+R ++ + +V ++ M+ ++PD FP +LK+VA L LG +H + K G DS V +LV +Y K + G +VFD ERN+ + WN LI+ C E A+E F M + N+ G NSF IN L+ K G L + L +D+V+W T+++ + QN +AL +M+ G+ P++ T+ S L AC+ + L G +H Y ++NG L N +ALVDMY C +LS +VF+ ++ I W+ MI G++ + +A+ F M S G+ ++ ++ AC SG G + D ++ T+ +D+ R G++D AM+ +M D V W + ++ + A L+ K+ LE K Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ----VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL------MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503 HSP 3 Score: 115.546 bits (288), Expect = 6.125e-25 Identity = 104/483 (21.53%), Postives = 209/483 (43.27%), Query Frame = -3 Query: 1062 IFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLR---FLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLM--------------------KNGDLNK--------------------AMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLE-VGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMM-----------FSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMA-ELVSEKLLRLEPKHPGSYVFLSNVYAA 2342 +F+ ++ +N+LI L ++ ++ F ML + V P T V+ + + L + +G +H ++ G E +SF+ +LV MY KL ++ + + R+ ++ WN +++ C+ L +A+E M + I+ ++ KNG L++ ++FD M ++ + W ++ G SQN ++AL +F M E GL N T+ + AC + GA IH + V+ GL ++ L+DMY++ G I A ++F + +++D+ TW+ MI G+ + A+ KM +KP+++ + +L +C+ + G + ++ + + +VD+ + G L + K ++P + + W + A H N + A +L+ +++ ++ P F+S V+AA Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD----LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH-AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLL--RMMMVQGVKPNEVTFIS-VFAA 627 HSP 4 Score: 68.9366 bits (167), Expect = 1.659e-10 Identity = 35/147 (23.81%), Postives = 79/147 (53.74%), Query Frame = -3 Query: 1368 WTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAA-ALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSH 1805 W ++ ++ ++A+ + M+ +G++P++ + L A A + +E G +IH + + G ++ T A LV++Y KCG+ + KVF+ E++ +W+ +I + A+ F+ M+ ++P + ++++TACS+ Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 439.884 bits (1130), Expect = 1.596e-138 Identity = 247/685 (36.06%), Postives = 385/685 (56.20%), Query Frame = -3 Query: 591 DPLKTHFSSLIKSTETTLQLR---QIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVS--LVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAM------P---------------------------------ERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2513 +P+ +F+ L+K +LR +IH +++ S T L ++ + + + A +F+ + L +N ++ G ++N + ++ M + ++P +T VL +V+ L L +G +HG ++SG FDS V +S LV+MY K + A Q+FD ERN ++ WN +I+ + N ++AM +F+ M P +RN+ NS I+ K +++ A +F +++ + +VSW ++ G +QNG AL+ F +M ++P+ T VS ++A A++ IH + + L N ALVDMYAKCG I+ A +F+ E+ + TW+ MI G+ HGF A+ F++M IKP+ V FL++++ACSHSG V+ GL F M+ +YSIE +M HY +VDLLGRAGRL+EA FI +MP+ P +GA+ AC+ HKN+ AE +E+L L P G +V L+N+Y A WE V +VR+ M Q + K PG S +E+ +VHSF +G H +++IY LE+++ +E GY+P+T VL +E + KE L +HSEKLA++F L+NT+ GTTI + KNLRVC DCH+ K S ++ REI++RD++RFHHFK G CSCGDYW Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG--FDSLVNISTALVDMYAKCGSLETARQLFDGMLERN----VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 170.629 bits (431), Expect = 2.193e-42 Identity = 104/364 (28.57%), Postives = 179/364 (49.18%), Query Frame = -3 Query: 1377 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI--------------------------------GSWNSFIN-------GLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTA 2351 A +F K L++ +++G + S ++ F+ M V P F ++LK +G +HG ++KSG D F L MY K ++ A +VFD PER+ ++ WN ++ G + G A+E+ ++M E N+ ++S +N K G L A QLFD M E++VVSW ++++ QN + ++A+ +F KML+ G++P D++++ AL ACA +G LE G IH VE GL N + +L+ MY KC + +A+ +F + + + + +W+ MI G+A +G A+ F +M +KPD +++++TA Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD----LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447 HSP 3 Score: 101.293 bits (251), Expect = 1.457e-20 Identity = 74/286 (25.87%), Postives = 135/286 (47.20%), Query Frame = -3 Query: 1023 KNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFD-SMR--FDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRML 1871 + G +++A ++F+ + K V + T++ G ++ D KAL F +M + P L C L G IH V++G L+ L +MYAKC + A KVF+ E+D+ +W+ ++ G++ +G A+ K M +KP + +++L A S + +G +MR FD + + T +VD+ + G L+ A + M + + V+W ++ A ++N K A L+ +K+L E P + ++A D+ER R + Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS----TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHAC-ADLGDLERGRFI 359
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 1.943e-137 Identity = 230/634 (36.28%), Postives = 366/634 (57.73%), Query Frame = -3 Query: 591 SIFNHSHHKS-LFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAM----------------------------P-----------------ERNIGSWNSFINGLMKNGD--LNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRP-NDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2345 ++FN K+ +F +N++I L + ++ F M + + P + +FP +K+ + L F G H + G + D FV +L+ MY ++ A +VFDE P+RN I+ W +I G GN A+ LF+ + P +R + N+ ++ K G+ + A ++FD++ +KD VS+ +I++ +Q+G +A +F ++++ + N +TL + L A + GAL G IH+ + GL + +++DMY KCG + +A K F+ K K++R+W+ MI G+ +HG +A+ F M+ SG++P+ + F+++L ACSH+G G +F++M+ + +EP ++HY +VDLLGRAG L +A IQRM + PD + W +L ACR HKN+++AE+ +L L+ + G Y+ LS++YA GRW+DVERVRM+M+N+ + K PG+S +E+NG+VH F+ GD +H + +IY L E+ E GY+ T V H+++EEEKE L HSEKLA+AF +MNT PG+T+ +VKNLRVC DCH+++K SK+ RE ++RD KRFHHFK G CSCGDYW Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN----IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 6.641e-137 Identity = 241/660 (36.52%), Postives = 367/660 (55.61%), Query Frame = -3 Query: 591 QIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIG--------------------------SW-------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVG-LRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2450 Q+H IL+ ++ L++ + + A +F+ + + +N++I G N + +S F+ ML + D T V A L LG +H +K+ + +L++MY K ++ A VF E +R S++ + +I G + G +A++LFE M E I W N+ ++ K G + +A +F EM+ KD++SW TI+ G S+N +ALS+F +LE P++ T+ L ACA + A + G IH Y + NG ++ A +LVDMYAKCG +L A +F++ KD+ +W+VMI G+ +HGF +AI F +M +GI+ D + F++LL ACSHSG VD G FF+ MR + IEPT++HY +VD+L R G L +A +FI+ MPI PD WGAL C CR H ++K+AE V+EK+ LEP++ G YV ++N+YA +WE V+R+R + + + K+PG S+IE+ G+V+ FVAGD + I L ++ + E+GY P T + L + EE EKE+AL HSEKLA+A ++++ G IR+ KNLRVCGDCH + K SK+++REI+LRD RFH FK G CSC +W Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871 HSP 2 Score: 158.688 bits (400), Expect = 2.124e-38 Identity = 126/438 (28.77%), Postives = 201/438 (45.89%), Query Frame = -3 Query: 1161 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI------------GSWNS-----------------------FINGLM----KNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSG-IKPDAVVFLALLTACSHSGQVDLGLNFFDS-MRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAH 2351 A +F+ + +N L+ L ++ F S+ F M+ V D TF V KS + L G LHG I+KSG + V SLV Y+K + + A +VFDE ER+ ++ WN +ING G EK + +F M I G +S F N L+ K GDL+ A +F EM ++ VVS+T+++ G ++ G +A+ +F +M E G+ P+ T+ + L+ CA+ L+ G R+H + EN L + + AL+DMYAKCG++ A VF E + KDI +W+ +I G++ + + +A+ F ++ PD +L AC+ D G MR Y + + + +VD+ + G L A + S D V+W + H Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD----VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS--LVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 578 HSP 3 Score: 103.219 bits (256), Expect = 3.616e-21 Identity = 75/315 (23.81%), Postives = 147/315 (46.67%), Query Frame = -3 Query: 1032 GDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLG----------------------LNFF------DSMR--FDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMP---ISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSN----VYAAVGRWEDVERV 1865 GDL +A ++FDE+K + + W ++N ++++GD ++ +F KM+ G+ + T + + + ++ G ++H + +++G + +LV Y K + SA KVF+E E+D+ +W+ +I G+ +G + + F +M+ SGI+ D +++ C+ S + LG L+ + DS + F + ++ YT ++ R G EA+K + M ISPD A+ C ++ + + V E ++ G +F+SN +YA G ++ E V Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE---WIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454 HSP 4 Score: 67.0106 bits (162), Expect = 5.808e-10 Identity = 53/220 (24.09%), Postives = 98/220 (44.55%), Query Frame = -3 Query: 1179 EKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACS-----HSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALF 1823 ++ V T + ++G+ + A+ + + + P TL S L CA +L+ G + N+ NG ++ + L MY CG++ AS+VF+E K + W++++ A G + +I FKKMM SG++ D+ F + + S H G+ G S+ ++ + L + R+D A K M D ++W ++ Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL------KNQRVDSARKVFDEMT-ERDVISWNSII 268
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3) HSP 1 Score: 428.713 bits (1101), Expect = 3.451e-136 Identity = 226/589 (38.37%), Postives = 349/589 (59.25%), Query Frame = -3 Query: 591 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKS-VAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMK-EKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2351 AL +F+ K+ +N+L+ G++++ S + + + PD ++ +L V + K +++ ++ Y + EM A ++F E+N+ + WN +I+G + G+LEKA F+ P R + +W + I G MK + A +F +M K++V+W +++G +N + L +F MLE G+RPN L SAL C+++ AL+ G +IH ++ L + +L+ MY KCG + A K+FE K+KD+ W+ MI G+A HG +A+ F++M+ + I+PD + F+A+L AC+H+G V++G+ +F+SM DY +EP HYT +VDLLGRAG+L+EA+K I+ MP P +G L ACR HKN+++AE +EKLL+L ++ YV L+N+YA+ RWEDV RVR M+ V K PG+S+IE+ +VH F + D H I+ KL+E+ + GY PE + LHN+EEE+KE L HSEKLA+AF + G+ I++ KNLR+CGDCH +K S++ +REII+RD RFHHFK G CSCGDYW Sbjct: 80 ALRVFHGMRAKNTITWNSLLIGISKDP---SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNT-----MITGYARRGEMEKARELFYSMMEKNE----VSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 430.639 bits (1106), Expect = 1.578e-135 Identity = 216/576 (37.50%), Postives = 341/576 (59.20%), Query Frame = -3 Query: 591 FNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEK----DVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2306 +N ++ G + + + +V F + PD++T VL SV + +G ++HG +IK G+ D V ++++MY K + + +F++ E+ EA G N++I GL +NG ++KA+++F+ KE+ +VVSWT+I+ G +QNG +AL +F +M G++PN +T+ S L AC I AL G H + V L N +AL+DMYAKCG I + VF K++ W+ ++ G+++HG + + F+ +M + +KPD + F +LL+AC G D G +F M +Y I+P ++HY+ +V+LLGRAG+L EA I+ MP PD WGAL +CR N+ +AE+ +EKL LEP++PG+YV LSN+YAA G W +V+ +R M++ + K+PG S+I+V +V++ +AGD H + +I K++EI R+ G+ P + LH++EE+E+E L HSEKLA+ F L+NT GT ++++KNLR+CGDCH+++K S + REI +RD RFHHFK G+CSCGD+W Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ-----------------------------FEMMEA------GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 139.428 bits (350), Expect = 1.392e-32 Identity = 129/570 (22.63%), Postives = 241/570 (42.28%), Query Frame = -3 Query: 738 SLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVF-----------------------------------EETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVG-KDPGWSYIEVNGQVHSFVAGDHDHKRAREIYL----KLEEIVSGAREQGYMPET---GWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTI 2318 +++ F++LI LT+ F S+ F M + PD P + K A L +G +H SG++ D+FV+ S+ MY++ MG A +VFD R + ++ + L+ + G LE+ + + M I E ++VSW I++G +++G H++A+ MF K+ +G P+ +T+ S L + L G IH Y ++ GL +K +A++DMY K G++ +F E+T E ++ +W+ +I G A +G +A+ F++M +G+KP+ V ++L AC + + G + + + + ++D+ + GR++ + MP + + V W +L H K + E L+R K ++ +++ +A G+ VG D GW Y ++ + + + +H L KL+E +E + P++ G +L++ + D +EKL F L +PGT + Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD----RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI---------------------------EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS-THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP--DFISFTSLLSACGQ---------------VGLTDEGWKYFKMMSEEYG-IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL---FHLEPENPGTYV 595 HSP 3 Score: 76.6406 bits (187), Expect = 5.644e-13 Identity = 40/166 (24.10%), Postives = 85/166 (51.20%), Query Frame = -3 Query: 1362 LNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSG 1859 N A + + + + S+++++ +++ +++ +F +M GL P+ L + CA++ A + G +IH +GL ++ ++ MY +CG + A KVF+ +KD+ T S ++ +A G + +R +M SGI+ + V + +L+ + SG Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A0D2PM74_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G031300 PE=4 SV=1) HSP 1 Score: 1332.01 bits (3446), Expect = 0.000e+0 Identity = 691/702 (98.43%), Postives = 697/702 (99.29%), Query Frame = -3 Query: 591 MSKFPCTKPTLTITVQMKSLRLLFERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2696 MSKFP TKP LTITVQMKSLRLLFERNSSPAKTTSSSSKFKRPKPSSISNGSDSSQSSSSQDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANLTTLLISVSSSLKSIPYALSIFN+SHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLR RVRPDKLT+PFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCC+VG+LEKA ELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNG+SQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWA HGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLL+LEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW Sbjct: 1 MSKFPSTKPILTITVQMKSLRLLFERNSSPAKTTSSSSKFKRPKPSSISNGSDSSQSSSSQDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANLTTLLISVSSSLKSIPYALSIFNNSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRHRVRPDKLTYPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCRVGDLEKATELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGLSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWATHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 702
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A061EK73_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020290 PE=4 SV=1) HSP 1 Score: 1147.88 bits (2968), Expect = 0.000e+0 Identity = 585/686 (85.28%), Postives = 630/686 (91.84%), Query Frame = -3 Query: 591 MKSLRLLFERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2648 MKSLRLLFERNSSPAKT SSSS FK+PKP S SS QDPLKTHF+SLI+S++TTLQLRQIHAQI RR+LSSS+NLTTLLIS SSSLKSIPYA+S+FNH HHKS+FLFNALIRGLT+NS +SS+SHFLLML VRPDKLT+PFVLKS+AGLGLR LGLILHGRIIKSGVEFDSFVRV+LVEMYVKL+E+GFALQVFDESPERNKS SILLWNVLING CK GNL KAMELFEA PERNIGSWNS ING M+NGDL+KA++LFDEMKEKDVVSWTT+VNG SQNGDH+KALSMFFKMLE LRPNDLTLV ALSACAKIGALEAG RIH+Y +ENG RLNKA AALVDMYAKCG+I SASKVF+ETKE+DI TWSVMIWGWAIHG+Y QAI+CFKKMMFSGIKPD VVFLALLTACSHSGQV+LGLNFFDSMR DYSIEPTMKHYTLVVDLLGRAG+LDE++KFIQRMP+SPDFV WGALFCACRAHKNIKMAELVS+ LL+LEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQN+AV KDPGWSYIEV G++HSFVAGDH HK AREIYLKLEEIV+G R+ GYMPETGWVLHNIEEEEKEDALGSHSEKLALAFAL+ TSPGTTIRIVKNLRVCGDCHSLMK ASKMSQREI+LRDIKRFHHFK G CSCGDYW Sbjct: 1 MKSLRLLFERNSSPAKTNSSSSSFKKPKPPISHGSSSSSS----QDPLKTHFASLIQSSKTTLQLRQIHAQIFRRNLSSSSNLTTLLISASSSLKSIPYAISLFNHFHHKSIFLFNALIRGLTDNSLLESSISHFLLMLSLGVRPDKLTYPFVLKSIAGLGLRCLGLILHGRIIKSGVEFDSFVRVALVEMYVKLKELGFALQVFDESPERNKSGSILLWNVLINGYCKDGNLGKAMELFEATPERNIGSWNSLINGFMRNGDLDKAVELFDEMKEKDVVSWTTMVNGFSQNGDHEKALSMFFKMLEAALRPNDLTLVPALSACAKIGALEAGARIHDYVLENGFRLNKAIGAALVDMYAKCGDIQSASKVFDETKERDILTWSVMIWGWAIHGYYEQAIQCFKKMMFSGIKPDGVVFLALLTACSHSGQVNLGLNFFDSMRLDYSIEPTMKHYTLVVDLLGRAGQLDESLKFIQRMPMSPDFVTWGALFCACRAHKNIKMAELVSQNLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNRAVDKDPGWSYIEVGGEMHSFVAGDHAHKHAREIYLKLEEIVAGTRQHGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALIRTSPGTTIRIVKNLRVCGDCHSLMKYASKMSQREIVLRDIKRFHHFKDGACSCGDYW 682
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: F6GWJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g01130 PE=4 SV=1) HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0 Identity = 474/638 (74.29%), Postives = 543/638 (85.11%), Query Frame = -3 Query: 591 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2504 +THF LI ++ T QL QIHAQI +L S++ + T LIS S SLKS+ YALSIF H +LF+FNALIRGL ENS F+ SVSHF+LMLR +RPD+LT PFVLKSVA L LG LHG ++K G+EFDSFVRVSLV+MYVK+ E+GF LQ+FDESP+RNK+ESILLWNVLINGCCKVG+L KA LFEAMPERN GSWNS ING ++NGDL++A +LF +M EK+VVSWTT++NG SQNGDH+KALSMF++MLE G+RPNDLT+VSAL AC KIGAL+ G RIHNY NG +LN+ ALVDMYAKCGNI SAS+VF ETK KD+ TWSVMIWGWAIHG + QA++CF KM +GI PD V+FLA+LTACSHSG VD GLNFF+SMR DYSIEPTMKHYTL+VDLLGRAGRLDEA+ FIQ MPI+PDFV WGALFCACRAHKNI+MAEL +EKLL+LEPKHPGSYVFLSNVYAAVGRWEDVERVR LM+N+ V KDPGWSYIEV GQVHSFVAGDH H RA EI LKLEEI + A+++GYMPET WVLHNIEEEEKEDALGSHSEKLALAF L++T+PG+TIRIVKNLRVCGDCHS+MK ASK+S+REIILRDIKRFHHFK G CSCGDYW Sbjct: 40 ETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A067KWK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01110 PE=4 SV=1) HSP 1 Score: 977.622 bits (2526), Expect = 0.000e+0 Identity = 460/642 (71.65%), Postives = 546/642 (85.05%), Query Frame = -3 Query: 591 QDPLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2516 Q+P +TH SLI +++T+ QL QIHAQI +LS+S+ + T LIS SSS K I YA+++FNH + K+ FLFNALIRGLT NS F+S++SHF+LMLR V+PD+LT+PFVLKS+A L LG LHG I KSG EFD FVR+S+V+ YVK+EE+G AL++FDESP+R ES LLWNVLINGCCKVG++ KA++LFE MPER SWNS ING +++GDL +A +LF M EK+VVSWTT+VNG+S NGDH+KALS+F KML+VG++PND T+VSALSACAKIGALEAGVRIH Y +NG RLN ALVDMYAKCG+I SAS+VF ETKEKD+ TW+VMIWGWAIHG +AI+CF++MM++GI+PD VVFLA+LTAC+H+G+VDLGLNFF SM DYSIEP+MKHY L+VDLLGRAGRL++A+KFI+RMPI+PDFV WGALFC CRAHKNIK+AEL ++KLL LEPKHPGSYVFLSNVYAAVGRWED ERVR LMQN+ + KDPGWSY+EV GQVHSF AGD HK A++IYLKLE+IV+GA+ QGYMP T WVLHNIEEEEKEDALGSHSEKLALAF L+ TSPG T+RIVKNLRVCGDCHSLMK ASKMSQREIILRDIKRFHHFK G+CSCGDYW Sbjct: 33 QNPSETHLISLIHASKTSRQLHQIHAQIFLHNLSTSSQIATQLISSSSSRKFIDYAITVFNHYYPKNSFLFNALIRGLTNNSLFESAISHFILMLRSDVKPDQLTYPFVLKSIATLCSEGLGRALHGMIYKSGFEFDLFVRISMVDAYVKVEELGSALKLFDESPQRFYGESTLLWNVLINGCCKVGSMRKAVDLFETMPERTTASWNSLINGFLRSGDLERANELFGRMPEKNVVSWTTMVNGLSHNGDHEKALSLFSKMLQVGVKPNDFTIVSALSACAKIGALEAGVRIHRYLTDNGFRLNAKIGTALVDMYAKCGSIESASQVFRETKEKDVLTWTVMIWGWAIHGHSEEAIQCFRQMMYAGIRPDEVVFLAILTACTHAGKVDLGLNFFKSMELDYSIEPSMKHYALIVDLLGRAGRLNQALKFIERMPITPDFVIWGALFCTCRAHKNIKLAELAAQKLLELEPKHPGSYVFLSNVYAAVGRWEDAERVRSLMQNRGIEKDPGWSYVEVEGQVHSFAAGDSSHKDAKDIYLKLEQIVAGAKGQGYMPGTEWVLHNIEEEEKEDALGSHSEKLALAFGLIRTSPGMTLRIVKNLRVCGDCHSLMKYASKMSQREIILRDIKRFHHFKDGICSCGDYW 674
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: B9GFV9_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0001s32380g PE=4 SV=1) HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0 Identity = 435/641 (67.86%), Postives = 533/641 (83.15%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPER-NKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P + HF SLI ++T LQL QIHAQI+ +LSSS+ +TT LIS SS KSI ++L++FNH K+LF FNALIRGLT NSHF +++ HF LMLR ++PD+LT+PFVLKS+AGL LG+ +H I++ G+E DSFVRVSLV+MYVK+E++G A +VFDESPER + S LLWNVLI GCCK G+++KA++LF+AMP++ SW++ I+G KNGD+++AM+LFD+M EK+VVSWTT+V+G S+NGD +KALSMF KMLE G+RPN T+VSALSACAKIG LEAG+RIH Y +NGL L +A ALVDMYAKCGNI SAS+VF ET++K IRTW+VMIWGWAIHG QAI CFK+MMF+GIKPD VVFLALLTAC HSGQVD+GLNFFDSMR DY IEP+MKHYTL+VD+LGR+G+L EA++FI+RMP++PDFV WGALFCACRAHK KMA+ KLL+LEP H G+Y+FLSN YAA+G+WED ERVR+LMQN+ V K+ GWS IEV GQVH FV+GDHDHK ++ I LKLEEI++GA +QGY+P T WVLHN+E+EEKED LGSH EKLALAFAL+ TSPG TIRIVKNL+VCGDCHSLMK ASK+SQREI+LRD+KRFHHFK G CSC D+W Sbjct: 79 PTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: K4CWN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g092050.2 PE=4 SV=1) HSP 1 Score: 879.396 bits (2271), Expect = 0.000e+0 Identity = 426/647 (65.84%), Postives = 518/647 (80.06%), Query Frame = -3 Query: 567 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEM-KEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW*NGSSVRL 2504 ++HF SLI S+ LQL+QIH QI+R++ SS++ + T LIS +S KSI Y LSIF+ K++FLFN LIRGL ENS F+ S+ +F M++ VRPDKLT+PFVLKSV LG + +G ++H I+K G+E+D+FVRV LVEMYVK E + FALQ+FDES ERNK ES++LWNV+INGCCK+G + KA+ LFE MPERN+GSWN+ I+GL++NG+++KAM+LFDEM EK+VVSWT +++G+ N HQKAL +FFKM+E G++PN LT+VSALSACAK GALEAG +IH+ V NGL LN A AL+DMYAKCG I SAS VF KEKDIRTWS+MIWGWAIHG +A+RCF++M +GIKPD V LA+LT CSH+G+VD GL FD M+ +SIEPTMKHY VVDLLGRAGR DEA+KFI MP+ PD+V WGALF ACRAHKNI+MA++ SEKLL+LEPKH G YVFLSNVYA GRW+DVERVR M+N+ V KDPGWS +EV GQ+H+FVAGD H R +EIYLKLEEI++GA++QGYMPET WVLHNI+EEEKE ALGSHSEKLALAF L++T PG I IVKNLRVCGDCHSLMK S+MSQR I+LRDIKRFHHFK GVCSC DYW S L Sbjct: 28 ESHFISLIHSSRNILQLQQIHGQIIRKNFSSNSRIVTQLISSASLHKSINYGLSIFSCFLDKNVFLFNVLIRGLKENSLFEKSILYFRKMVKMGVRPDKLTYPFVLKSVTALGDKRVGGVVHCGILKMGLEYDTFVRVCLVEMYVKAELVDFALQLFDESSERNKVESVILWNVVINGCCKIGRVSKALALFEEMPERNVGSWNTLISGLLRNGEVDKAMELFDEMTNEKNVVSWTCMIHGLMLNELHQKALDLFFKMVEEGVKPNGLTVVSALSACAKTGALEAGKKIHDNIVNNGLHLNAAVGNALLDMYAKCGYIESASLVFSGLKEKDIRTWSIMIWGWAIHGHVDKALRCFEQMRLTGIKPDGVSVLAVLTGCSHAGRVDQGLQIFDGMQRQFSIEPTMKHYAAVVDLLGRAGRFDEALKFIASMPLEPDYVIWGALFSACRAHKNIEMAKVASEKLLQLEPKHAGGYVFLSNVYAGAGRWDDVERVRSSMKNKNVEKDPGWSSMEVAGQLHTFVAGDSAHTRKQEIYLKLEEIITGAKQQGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLISTGPGVIIMIVKNLRVCGDCHSLMKYVSRMSQRVIVLRDIKRFHHFKDGVCSCKDYWSQASDTYL 674
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A0A0LI86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139850 PE=4 SV=1) HSP 1 Score: 858.21 bits (2216), Expect = 0.000e+0 Identity = 426/639 (66.67%), Postives = 517/639 (80.91%), Query Frame = -3 Query: 591 LKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2507 L+THF LI ++ +T +LRQIH Q+ R ++ SS+ + T IS SSL S+ YA+SIF K+ +LFNALIRGL ENS F+SS+S F+LML+ ++ PD+LTFPFVLKS A L +G LH I+K G+EFDSFVRVSLV+MYVK+EE+G AL+VFDESPE K+ S+L+WNVLI+G C++G+L KA ELF++MP+++ GSWNS ING MK GD+ +A +LF +M EK+VVSWTT+VNG SQNGD +KAL FF MLE G RPND T+VSALSACAKIGAL+AG+RIHNY NG +LN ALVDMYAKCGNI A KVF ETKEK + WSVMIWGWAIHG + +A++ F+ M F+G KPD+VVFLA+L ACSHSGQV+ GL FFD+MR Y IEP+MKHYTLVVD+LGRAGRLDEA+KFI+ MPI+PDFV WGALFCACR HKN++MAEL S+KLL+LEPKHPGSYVFLSN YA+VGRW+D ERVR+ M++ KDPGWS+IEV+ ++H FVAGD+ H RA EIY KL+EI + ARE+GY E VLHNIEEEEKE+ALG HSEKLALAF +++T PGTT+RIVKNLRVC DCHS MK ASKMS+REIILRD+KRFHHF GVCSCGDYW Sbjct: 41 LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: V4S5Y2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004495mg PE=4 SV=1) HSP 1 Score: 837.41 bits (2162), Expect = 0.000e+0 Identity = 418/638 (65.52%), Postives = 510/638 (79.94%), Query Frame = -3 Query: 591 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2504 +TH SLI S+ +T QLRQIHAQI+ +L +S+ +TT LIS +S KS YALSIF H K+L +FN LIRGL ENSHFQS +SHF+ MLR VRP++LT+PFV KSVA L L LG LH I+KSGVE+D+FVRV L +MYV+L + A +VFDE+PE+NKSES+LLWNVLINGC K+G L KA+ELF MP++N+ SW S I+G M+ GDL KA +LF++M EK VVSWT ++NG SQNG+ +KAL+MFF+ML+ G+R ND T+VSALSACAK+GALEAGVR+HNY N L A ALVDMYAKCGNI +AS VF ETKEKD+ TW+ MIWG AIHG Y QAI+ FKKMM+SG +PD VFLA+LTAC +SGQV L LNFFDSMRFDY IEP++KH+T+VV+LL R G++D+A+ FI +MP +PDFV WGALFCACR HK+ K+A++ ++LL+L+PKHP SYV LSN+YAA GRW+DV RVR LMQ +++ KDPGWSYIEVNG VH F AG HK A+EI+ KLEEI++GAREQGYMP T WVLHNI +EEKE+ALG HSEKLALAF L+ T+PGTTI+IVK L +CGDCHSLMK ASK+SQREI+LRD RFH+FK G CSC DYW Sbjct: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSTDYALSIFGHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQVDKALNFINKMPETPDFVIWGALFCACRTHKDTKIAKIALQRLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEEIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 664
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A068US57_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_52 OS=Coffea canephora GN=GSCOC_T00033183001 PE=4 SV=1) HSP 1 Score: 820.461 bits (2118), Expect = 0.000e+0 Identity = 382/550 (69.45%), Postives = 460/550 (83.64%), Query Frame = -3 Query: 591 MLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEV-GLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2237 M R VRP +LTFPFVLKSV GLG ++LG ++HG I+K G+EFD FVRVSLV+MY K+E + ALQ+FDESPERNK +S+LLWNV+INGCCK G LEKA+ELFEAMPERN+GSWNS INGL++NG ++KA++LF+ M EK+VVSWTT+V+G+S NG H+KAL MFF M+E G+R NDLTLVS LSACAK GALEAG++IH Y + N RLN A AL+DMYAKCG I SAS+VF +TKEKD+RTWSVMIWGWAIHG QA++CF+KM +GI+PD V FLA+LTACSH+G VD GL FFDSM+ DYSIEPTMKH ++VDL GRAG+LDEA++FIQ M ++PDFV WGALF ACRAHKNI+MA+ VSEKLL+LEPKH GSYVF+SN+YA VG WE+VERVR M+++ KD G S++EV+G++HSFVAGD H +EIY KLEE+ + ARE GY+PET WVLHNIEEEEKEDALG+HSEKLALAF L++T PG +RIVKNLR CGDCHSLMK SK+SQREI++RDIKRFHHFK G+CSC DYW Sbjct: 1 MSRLDVRPSRLTFPFVLKSVVGLGDKWLGGMVHGGILKMGLEFDGFVRVSLVDMYAKMELLSLALQLFDESPERNKLDSVLLWNVVINGCCKSGILEKAVELFEAMPERNLGSWNSLINGLIRNGKVDKAVELFEGMVEKNVVSWTTMVHGLSLNGMHEKALEMFFNMIEEEGVRANDLTLVSVLSACAKTGALEAGIKIHKYILGNKFRLNAAVGTALIDMYAKCGQIQSASQVFRDTKEKDVRTWSVMIWGWAIHGSVEQALQCFEKMKLTGIEPDEVAFLAVLTACSHAGLVDEGLKFFDSMKLDYSIEPTMKHCAVIVDLYGRAGQLDEALRFIQCMALTPDFVIWGALFSACRAHKNIEMAKYVSEKLLQLEPKHSGSYVFMSNIYAGVGIWEEVERVRTSMKDKGAAKDTGLSHVEVHGKLHSFVAGDQAHMHTKEIYSKLEEMTNRAREHGYIPETEWVLHNIEEEEKEDALGTHSEKLALAFGLISTGPGVVLRIVKNLRTCGDCHSLMKHVSKLSQREIVVRDIKRFHHFKDGICSCQDYW 550 HSP 2 Score: 70.8626 bits (172), Expect = 2.825e-9 Identity = 69/293 (23.55%), Postives = 134/293 (45.73%), Query Frame = -3 Query: 1503 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQR-VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMP----ERNIGSWNSFINGLMKNGDLNKAMQLFDEMK-----EKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRT 2351 A+ +F K++ + ++ GL+ N + ++ F M+ + VR + LT VL + A G G+ +H I+ + ++ V +L++MY K ++ A QVF ++ E++ + W+V+I G G++E+A++ FE M E + ++ + + G +++ ++ FD MK E + IV+ + G +AL M L P+ + + SAC + + Y E L+L + + V M NI + ++EE + +RT Sbjct: 130 AVELFEGMVEKNVVSWTTMVHGLSLNGMHEKALEMFFNMIEEEGVRANDLTLVSVLSACAKTGALEAGIKIHKYILGNKFRLNAAVGTALIDMYAKCGQIQSASQVFRDTKEKD----VRTWSVMIWGWAIHGSVEQALQCFEKMKLTGIEPDEVAFLAVLTACSHAGLVDEGLKFFDSMKLDYSIEPTMKHCAVIVDLYGRAGQLDEALRFIQCM---ALTPDFVIWGALFSACRA----HKNIEMAKYVSEKLLQLEPKHSGSYVFM----SNIYAGVGIWEEVER--VRT 405
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: M1CI35_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401026412 PE=4 SV=1) HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0 Identity = 376/545 (68.99%), Postives = 453/545 (83.12%), Query Frame = -3 Query: 591 VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEM-KEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2222 VRPDKLT+PFVLKSV LG + +G +H ++K G+E+D+FVRV LVE+YVK+E + FALQ+FDESPERNK ES++LWNV+INGCCK+G + A+ LFE MPERN+GSWN+ I+GL++NG+++KAM+LFDEM EK+VVSWT +++G+ NG HQKAL +FFKM+E G++PN LT+VSALSACAK GALEAG +IH+ + NGL LN A AL+DMYAKCG I SAS VF KEKDIRTWS+MIWGWAIHG +A+RCF++M +GIKPD V LA+LT CSH+G+VD GL FDSM+ + SIEPTMKHY VVDLLGRAGR DEA+KFI MP+ PD+V WGALF ACRAHKNI+MA++ SEKLL+LEPKH G YVFLSNVYA GRW+DVERVR M+N+ V KDPGWS +EV+GQ+H+FVAGD H R +EIYLKLEEI++GA++QGYMPET WVLHNI+EEEKE ALGSHSEKLALAF L++T PG I IVKNLRVCGDCHSLMK S+MSQR I+LRDIKRFHHFK GVCSC DYW Sbjct: 3 VRPDKLTYPFVLKSVTALGEKGVGGGVHCGVLKVGLEYDTFVRVCLVELYVKVELVDFALQLFDESPERNKVESVILWNVVINGCCKIGRMSNALALFEEMPERNVGSWNTLISGLLRNGEVDKAMELFDEMPNEKNVVSWTCMIHGLMLNGLHQKALDLFFKMVEEGVKPNGLTVVSALSACAKTGALEAGKKIHDNIMNNGLHLNAAVGNALLDMYAKCGYIESASLVFSGLKEKDIRTWSIMIWGWAIHGDVDKALRCFEQMRLTGIKPDGVSVLAVLTGCSHAGRVDQGLQIFDSMQHECSIEPTMKHYAAVVDLLGRAGRFDEALKFIASMPLEPDYVIWGALFSACRAHKNIEMAKVASEKLLQLEPKHAGGYVFLSNVYAGAGRWDDVERVRSSMKNKNVEKDPGWSSMEVDGQLHTFVAGDSAHTRKQEIYLKLEEIITGAKQQGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLISTGPGVIIMIVKNLRVCGDCHSLMKYVSRMSQRVIVLRDIKRFHHFKDGVCSCKDYW 547 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097138 ID=g.barbadense_cottongen_reftransV1_0097138; Name=g.barbadense_cottongen_reftransV1_0097138; organism=Gossypium barbadense; type=contig; length=2716bpback to top |