g.barbadense_cottongen_reftransV1_0097138, g.barbadense_cottongen_reftransV1_0097138 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1) HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0 Identity = 367/640 (57.34%), Postives = 487/640 (76.09%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF SLI + + T LR +HAQILRR + SS + L+S SS LKS Y+LSIF +S ++ F+ NALIRGLTEN+ F+SSV HF+LMLR V+PD+LTFPFVLKS + LG R+LG LH +K+ V+ DSFVR+SLV+MY K ++ A QVF+ESP+R K ESIL+WNVLING C+ ++ A LF +MPERN GSW++ I G + +G+LN+A QLF+ M EK+VVSWTT++NG SQ GD++ A+S +F+MLE GL+PN+ T+ + LSAC+K GAL +G+RIH Y ++NG++L++A ALVDMYAKCG + A+ VF KDI +W+ MI GWA+HG + QAI+CF++MM+SG KPD VVFLA+LTAC +S +VDLGLNFFDSMR DY+IEPT+KHY LVVDLLGRAG+L+EA + ++ MPI+PD W AL+ AC+AHK + AE VS+ LL L+P+ GSY+FL +A+ G +DVE+ R+ +Q + + GWSYIE++GQ++ F AGD+ HK +EI LKL+EI+S A ++GY P W +H+IEEEEKE+ G HSEKLAL + T+PGTTIRI+KNLR+CGDCHSLMK SK+SQR+I+LRD ++FHHFK G CSCGDYW Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 1.664e-153 Identity = 264/640 (41.25%), Postives = 378/640 (59.06%), Query Frame = -3 Query: 591 IKSTETTLQLRQIHAQILR----RHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVS---HFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERN--IGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2483 I + T L QIHA ++ R ++A + + + + YA IFN ++ F +N +IRG +E+ ++ ++ + +M + V P++ TFP VLK+ A G G +HG +K G D FV +LV MYV GF K +L + +I EK M + +R+ I WN I+G M+ GD A LFD+M+++ VVSW T+++G S NG + A+ +F +M + +RPN +TLVS L A +++G+LE G +H Y ++G+R++ +AL+DMY+KCG I A VFE +++ TWS MI G+AIHG G AI CF KM +G++P V ++ LLTACSH G V+ G +F M +EP ++HY +VDLLGR+G LDEA +FI MPI PD V W AL ACR N++M + V+ L+ + P G+YV LSN+YA+ G W +V +R+ M+ + + KDPG S I+++G +H FV D H +A+EI L EI R GY P T VL N+EEE+KE+ L HSEK+A AF L++TSPG IRIVKNLR+C DCHS +K SK+ +R+I +RD KRFHHF+ G CSC DYW Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC---GFM-----------KDARVLFYKNII---------EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 474.552 bits (1220), Expect = 1.121e-152 Identity = 268/713 (37.59%), Postives = 406/713 (56.94%), Query Frame = -3 Query: 591 DPLKTHFS-SLIKSTETTLQLRQIHAQILRRHLSSSA---NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERN---------------------------KSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI-----------------GS---------W-------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVE--NGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2513 D ++ H S SL+ + +T LR IHAQ+++ L ++ + +S + +PYA+S+F +L ++N + RG +S S++ ++ M+ + P+ TFPFVLKS A G +HG ++K G + D +V SL+ MYV+ + A +VFD+SP R+ + ++ WN +I+G + GN ++A+ELF+ M + N+ GS W N+ I+ K G+L A LF+ + KDV+SW T++ G + +++AL +F +ML G PND+T++S L ACA +GA++ G IH Y + G+ + +L+DMYAKCG+I +A +VF K + +W+ MI+G+A+HG + F +M GI+PD + F+ LL+ACSHSG +DLG + F +M DY + P ++HY ++DLLG +G EA + I M + PD V W +L AC+ H N+++ E +E L+++EP++PGSYV LSN+YA+ GRW +V + R L+ ++ + K PG S IE++ VH F+ GD H R REIY LEE+ + G++P+T VL +EEE KE AL HSEKLA+AF L++T PGT + IVKNLRVC +CH K SK+ +REII RD RFHHF+ GVCSC DYW Sbjct: 29 DSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 469.929 bits (1208), Expect = 1.766e-151 Identity = 250/676 (36.98%), Postives = 393/676 (58.14%), Query Frame = -3 Query: 591 FSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFD--ESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIG-SWNSFINGL--------------------------------------MKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2495 ++SLI S QL+QIHA++L L S L T LI SSS I +A +F+ +F +NA+IRG + N+HFQ ++ + M RV PD TFP +LK+ +GL +G +H ++ + G + D FV+ L+ +Y K +G A VF+ PER +I+ W +++ + G +A+E+F M + ++ W + ++ L K G + A LFD+MK +++ W +++G ++NG ++A+ MF +M+ +RP+ +++ SA+SACA++G+LE ++ Y + R + ++AL+DM+AKCG++ A VF+ T ++D+ WS MI G+ +HG +AI ++ M G+ P+ V FL LL AC+HSG V G FF+ M D+ I P +HY V+DLLGRAG LD+A + I+ MP+ P WGAL AC+ H+++++ E +++L ++P + G YV LSN+YAA W+ V VR+ M+ + + KD G S++EV G++ +F GD H R EI ++E I S +E G++ LH++ +EE E+ L SHSE++A+A+ L++T GT +RI KNLR C +CH+ K SK+ REI++RD RFHHFK GVCSCGDYW Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER----TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 3.147e-151 Identity = 262/708 (37.01%), Postives = 397/708 (56.07%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSS--ANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQ-RVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPE--------------------------RNIGSW-------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVS-------------------------------QNGDHQKALSMFFKM-LEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEE-KEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 SLI+ + QL+Q H ++R S + ++ SS S+ YA +F+ + F +N LIR S+ FL M+ + + P+K TFPF++K+ A + LG LHG +KS V D FV SL+ Y ++ A +VF E++ ++ WN +ING + G+ +KA+ELF+ M R + S+ N+ ++ K G + A +LFD M+EKD V+WTT+++G + QNG +AL +F ++ L+ ++ N +TLVS LSACA++GALE G IH+Y ++G+R+N +AL+ MY+KCG++ + +VF +++D+ WS MI G A+HG +A+ F KM + +KP+ V F + ACSH+G VD + F M +Y I P KHY +VD+LGR+G L++A+KFI+ MPI P WGAL AC+ H N+ +AE+ +LL LEP++ G++V LSN+YA +G+WE+V +R M+ + K+PG S IE++G +H F++GD+ H + ++Y KL E++ + GY PE VL IEEEE KE +L HSEKLA+ + L++T IR++KNLRVCGDCHS+ K S++ REII+RD RFHHF+ G CSC D+W Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD----VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1) HSP 1 Score: 464.922 bits (1195), Expect = 1.623e-150 Identity = 247/641 (38.53%), Postives = 372/641 (58.03%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSSA-------NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAG-DHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 +L++S + L+ IH +LR HL S L + + + YA IF+ + +LF+FN LIR + + + + ML+ R+ PD +TFPF++K+ + + +G H +I++ G + D +V SLV MY + A ++F + R+ ++ W ++ G CK G +E A E+F+ MP RN+ +W+ ING KN KA+ LF+ MK + VV+ N+ +VS +S+CA +GALE G R + Y V++ + +N ALVDM+ +CG+I A VFE E D +WS +I G A+HG +A+ F +M+ G P V F A+L+ACSH G V+ GL +++M+ D+ IEP ++HY +VD+LGRAG+L EA FI +M + P+ GAL AC+ +KN ++AE V L++++P+H G YV LSN+YA G+W+ +E +R +M+ + V K PGWS IE++G+++ F G D H +I K EEI+ R GY TG +++EEEKE ++ HSEKLA+A+ +M T PGTTIRIVKNLRVC DCH++ K S++ RE+I+RD RFHHF+ GVCSC DYW Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD----VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA-------------------------------NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 3.965e-148 Identity = 244/627 (38.92%), Postives = 363/627 (57.89%), Query Frame = -3 Query: 591 QLRQIHAQILRRHL---SSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHN-IEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2459 +L+QIHA++L+ L S + S+S +PYA +F+ FL+N +IRG + + + S+ + ML + TFP +LK+ + L +H +I K G E D + N LIN GN + A LF+ +PE + SWNS I G +K G ++ A+ LF +M EK+ +SWTT+++G Q +++AL +F +M + P++++L +ALSACA++GALE G IH+Y + +R++ L+DMYAKCG + A +VF+ K+K ++ W+ +I G+A HG +AI F +M GIKP+ + F A+LTACS++G V+ G F SM DY+++PT++HY +VDLLGRAG LDEA +FIQ MP+ P+ V WGAL ACR HKNI++ E + E L+ ++P H G YV +N++A +W+ R LM+ Q V K PG S I + G H F+AGD H +I K + E GY+PE +L + ++++E+E + HSEKLA+ + L+ T PGT IRI+KNLRVC DCH + K SK+ +R+I++RD RFHHF+ G CSCGDYW Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV-----------------------------------NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 457.988 bits (1177), Expect = 5.144e-147 Identity = 250/672 (37.20%), Postives = 377/672 (56.10%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI----------------------GSW------------NSFINGLMKN-----GDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 +LI T L+QIH ++ HL L LL+ + + Y+ +F+H+ ++FL+N+LI G N F ++ FL + + + TFP VLK+ R LG+ LH ++K G D SL+ +Y + A ++FDE P+R S++ W L +G G +A++LF+ M E + G W NSF+ + N G + KA +FD M EKD+V+W+T++ G + N ++ + +F +ML+ L+P+ ++V LS+CA +GAL+ G + + N A AL+DMYAKCG + +VF+E KEKDI + I G A +G + F + GI PD FL LL C H+G + GL FF+++ Y+++ T++HY +VDL GRAG LD+A + I MP+ P+ + WGAL CR K+ ++AE V ++L+ LEP + G+YV LSN+Y+ GRW++ VR +M + + K PG+S+IE+ G+VH F+A D H + +IY KLE++ + R G++P T +V ++EEEEKE LG HSEKLA+A L++T G IR+VKNLRVCGDCH +MK SK+++REI++RD RFH F G CSC DYW Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 1.964e-146 Identity = 251/641 (39.16%), Postives = 375/641 (58.50%), Query Frame = -3 Query: 591 HFSSLIKSTETTLQLRQIHAQILRRHLSSSA--NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQR-VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKD-IRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAR-EQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2498 H SL+ S + L QIH ++ + + + +L S ++PYA + F+FN L+RG +E+ +SV+ F+ M+R+ V PD +F FV+K+V G +H + +K G+E FV +L+ MY + FA +VFDE + N ++ WN +I C + ++ A E+F+ M RN SWN + G +K G+L A ++F EM +D VSW+T++ G++ NG ++ F ++ G+ PN+++L LSAC++ G+ E G +H + + G + AL+DMY++CGN+ A VFE +EK I +W+ MI G A+HG +A+R F +M G+ PD + F++LL ACSH+G ++ G ++F M+ Y IEP ++HY +VDL GR+G+L +A FI +MPI P + W L AC +H NI++AE V ++L L+P + G V LSN YA G+W+DV +R M Q + K WS +EV ++ F AG+ E + KL+EI+ + E GY PE L+++EEEEKED + HSEKLALAFAL S G IRIVKNLR+C DCH++MK SK+ EI++RD RFH FK G CSC DYW Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN----LVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 6.614e-145 Identity = 238/645 (36.90%), Postives = 377/645 (58.45%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHL---SSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVG-LRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMM-FSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P + LI +++ ++ QIHA ILR +L L L +S I ++L++F+ + LFLF A I + N + ++ +L + P++ TF +LKS + G ++H ++K G+ D +V LV++Y K G++ A ++F+ MPER++ S + I K G++ A LFD M E+D+VSW +++G +Q+G AL +F K+L G +P+++T+V+ALSAC++IGALE G IH + + +RLN L+DMY+KCG++ A VF +T KDI W+ MI G+A+HG+ A+R F +M +G++P + F+ L AC+H+G V+ G+ F+SM +Y I+P ++HY +V LLGRAG+L A + I+ M + D V W ++ +C+ H + + + ++E L+ L K+ G YV LSN+YA+VG +E V +VR LM+ + + K+PG S IE+ +VH F AGD +H +++EIY L +I + GY+P T VL ++EE EKE +L HSE+LA+A+ L++T PG+ ++I KNLRVC DCH++ K SK++ R+I++RD RFHHF G CSCGD+W Sbjct: 27 PPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAK-----------------------------------GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: F6HIU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g01390 PE=4 SV=1) HSP 1 Score: 533.487 bits (1373), Expect = 3.343e-174 Identity = 274/669 (40.96%), Postives = 405/669 (60.54%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSS-SANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNK---------------------------SESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQ-GYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P SL +T L+Q+HAQI+ H S + L ++S + YA +IF+H + L+N+LIR L+ + ++ + ML+ ++PD +T+PFV+K+ + + GL++H ++KSG E DS++ SL+ +Y +++G A Q+F+ R+ ++ WN +ING VG +++A LF+ MPERN+ SWNS + G +K G++ A LF EM +DVVSW +++ +Q G +AL++F +M VG++P + T+VS LSACA +GAL+ G+ +H Y +N + +N ALVDMYAKCG I A++VF + KD+ W+ +I G AIHG +A + FK+M +G++P+ + F+A+L+ACSH+G VD G D M Y IEP ++HY V+DLL RAG L+EAM+ I MP+ P+ A GAL CR H N ++ E+V ++L+ L+P H G Y+ LSN+YAA +W+D +VR LM+ + K PG S IE+ G VH FVAGD H + +IY KL EI + + GY +TG VL ++EEE+KE AL HSEKLA+A+ L++ IRIVKNLRVC DCH ++K SK+ REII+RD RFHHF+ G CSC D+W Sbjct: 12 PSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 680
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: M5W3D3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb025182mg PE=4 SV=1) HSP 1 Score: 526.939 bits (1356), Expect = 8.943e-172 Identity = 260/590 (44.07%), Postives = 375/590 (63.56%), Query Frame = -3 Query: 591 YALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEA-MPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKML-EVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2354 +AL +F+ ++F++N +I+G EN+ S +S++ M+ RP+K T+ + K+ + L +H ++K+ D +R + ++MY + A ++ DE+ E N ++ N +I+G K G++E A ELFE MP +N+GSWN+ ++GL + G L +A +LFD M EKD +SW+ +V+G + G H++AL +F +M E L P L S L+ACA +GA++ G +H Y N ++L+ AAL+DMYAKCG + A +VFE K+K+I TW+ MI G A+HG AI F KM S ++P+ V FL +L AC+HSG VD GLNFF SM+ Y IEP ++HY +VD+ GRAG+L+EA + I MPI P+ GAL ACR H N +M E V LL LEP++ G Y LSN+YA GRW+D E+VRMLM+ + V PG S +++ G VH F G+ H + +E+YL LE I+ + +GY P + VL +I EEEKE AL HSEKLA+AF ++NT PGTTIR+ KNLR C DCHS +K SK+ +R+II+RD R+HHF+ G CSC D+W Sbjct: 86 FALKVFDSVWRPNVFVWNIVIKGCLENNEALSCISYYCKMVAMNARPNKFTYSILFKACTLVQAVEEALQIHAHVVKNQFGEDGHIRSAGIQMYASFGLVEEARRMLDEAAELN---DVICSNAMIDGYMKCGDVEAAKELFEKHMPSKNVGSWNAMVSGLARCGMLKEARELFDGMSEKDEISWSAMVDGYIKRGCHKEALEIFNEMQKENLLSPRKFILSSVLAACANMGAVDQGKWVHAYIKRNTIQLDAVLGAALLDMYAKCGRLDMAWEVFENIKQKEISTWNAMIGGLAMHGRADDAIELFSKMQRSKLEPNGVTFLNVLNACAHSGFVDKGLNFFSSMKQFYGIEPEVEHYGCMVDMFGRAGQLEEAEQLINSMPIKPNAAVLGALLGACRIHGNAEMGERVGRILLELEPQNSGRYALLSNIYAKAGRWDDAEKVRMLMKERGVKTSPGISMVDIGGMVHEFKVGEGSHPQMKEVYLMLETIIEKLQMEGYSPNSSQVLFDIAEEEKETALQYHSEKLAIAFGVLNTKPGTTIRVTKNLRTCEDCHSAIKIFSKVYERDIIVRDRMRYHHFRNGRCSCKDFW 672
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A0A0LE51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895070 PE=4 SV=1) HSP 1 Score: 525.783 bits (1353), Expect = 2.211e-171 Identity = 265/592 (44.76%), Postives = 383/592 (64.70%), Query Frame = -3 Query: 591 YALSIFNHS-HHKSLFLFNALIRGLTENSHFQSSVSHF--LLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKML-EVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2354 +++ IFNH ++F +NAL++ ++++ + +++S+F L+L PD+ TF VLK+ AGL G +H + K G E + FVR SLV++Y K+ A ++FDE R+ ++ WN LI+G C G ++KA +F+ M E+N+ SW++ I+G + G+L +A QLF+ M ++VVSW ++ G +QN + A+ +F +M E GL PND+TLVS LSACA +GAL+ G IH + N + + AL DMYAKCG +L A VF E E+D+ +WS++I G A++G+ +A F +M+ G++P+ + F+ LLTAC+H+G VD GL +FD M Y I P ++HY VVDLL RAGRLD+A I MP+ P+ + WGAL CR +K+ + E V ++L L+ H GS V+L+NVYA++GR +D R+ M++ K PG S+IE+N V+ F GD H ++ IY + E+ + GY P+T V+HNI+EEEKEDAL +HSEKLALAF L+NTS GTTIRIVKNLRVC DCH +K SK+ +REI++RD RFHHFK G CSC DYW Sbjct: 76 HSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRD----VVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 663
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: V4U4U3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004495mg PE=4 SV=1) HSP 1 Score: 514.998 bits (1325), Expect = 4.209e-170 Identity = 266/418 (63.64%), Postives = 327/418 (78.23%), Query Frame = -3 Query: 1251 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGR 2504 +TH SLI S+ +T QLRQIHAQI+ +L +S+ +TT LIS +S KS YALSIF H K+L +FN LIRGL ENSHFQS +SHF+ MLR VRP++LT+PFV KSVA L L LG LH I+KSGVE+D+FVRV L +MYV+L + A +VFDE+PE+NKSES+LLWNVLINGC K+G L KA+ELF MP++N+ SW S I+G M+ GDL KA +LF++M EK VVSWT ++NG SQNG+ +KAL+MFF+ML+ G+R ND T+VSALSACAK+GALEAGVR+HNY N L A ALVDMYAKCGNI +AS VF ETKEKD+ TW+ MIWG AIHG Y QAI+ FKKMM+SG +PD VFLA+LTAC +SGQV L LNFFDSMRFDY IEP++KH+T+VV+LL R G+ Sbjct: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSTDYALSIFGHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ 448
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A067K574_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11623 PE=4 SV=1) HSP 1 Score: 515.768 bits (1327), Expect = 9.013e-168 Identity = 270/638 (42.32%), Postives = 393/638 (61.60%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSS--ANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRV-RPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEE-TKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAR-EQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 SL+ S ++ L+QIHA +L+ L + LL S S+ YA S+F H+ + +F++N LIRGL E+ Q+S+ F+ M R+ + PD +F F+LK+ A L G+ LH + + G+ FV +L+ MY + + + VF+E + N ++ WN +I C G+++ A ++F+ MP RN+ SWN + G +K G+L A ++F EM KD VSW+T++ G + NG +A F ++ G RPN+++L LSACA+ GA E G +H + V+ GL + AL+D Y+KCGN+ A VFE K+K I +W+ M+ G+A+HG QAI+ F +M SG +PD + F+ LL ACSH+G VD G +F+ M Y I+P ++HY +VDL GRAG+L +A +F+ +MPI P+ V W L AC H ++K+AE V E+L L+P + +V LSNVYA G+W+DV VR M +Q + K PGWS IEV+ +++FVAG K E Y KL++++ R E GY PE G VLH+IEEEEKED++ HSEKLA+AF + G TIR+VKNLR+C DCH +MK S++ + EI++RD RFH F G CSCGDYW Sbjct: 10 SLLNSCKSLTSLKQIHANVLKNGLDTDPFVAGKLLLHCTISLSDSLDYACSLFRHTPNPDVFMYNTLIRGLAESDKPQNSIFTFVEMRRESLFTPDSFSFAFILKAAANLRSLRTGVQLHCQALTHGLNTHIFVGTTLISMYGECGSVELSRNVFEEMLQPN----VVAWNAVITACFNGGDVKGAKQMFDLMPLRNLTSWNVMLAGYVKTGELELARKMFVEMPVKDDVSWSTMIVGFAHNGCFDEAFEFFRELQREGTRPNEVSLTGVLSACAQAGAFEFGKILHGFIVKAGLDWIVSVNNALLDTYSKCGNLCLAQLVFERMPKKKSIVSWTSMMAGFAMHGHGEQAIKLFHEMESSGTRPDGITFILLLYACSHAGLVDQGCEYFNKMMDHYDIKPAIEHYGCMVDLYGRAGQLQKACEFVYQMPIPPNDVIWRTLLGACSIHGDVKLAEQVKERLSELDPNNSSDHVLLSNVYAVAGKWKDVATVRRSMSDQRIKKTPGWSMIEVDKVMYTFVAGAKQDKITEEAYEKLKDVMFRLRVEGGYAPEIGCVLHDIEEEEKEDSMSMHSEKLAVAFGIARLREGKTIRVVKNLRICRDCHVVMKMISQVYKLEIVVRDRSRFHSFIDGSCSCGDYW 643 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097138 ID=g.barbadense_cottongen_reftransV1_0097138; Name=g.barbadense_cottongen_reftransV1_0097138; organism=Gossypium barbadense; type=contig; length=2716bpback to top |