g.barbadense_cottongen_reftransV1_0097138, g.barbadense_cottongen_reftransV1_0097138 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1) HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0 Identity = 367/640 (57.34%), Postives = 487/640 (76.09%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF SLI + + T LR +HAQILRR + SS + L+S SS LKS Y+LSIF +S ++ F+ NALIRGLTEN+ F+SSV HF+LMLR V+PD+LTFPFVLKS + LG R+LG LH +K+ V+ DSFVR+SLV+MY K ++ A QVF+ESP+R K ESIL+WNVLING C+ ++ A LF +MPERN GSW++ I G + +G+LN+A QLF+ M EK+VVSWTT++NG SQ GD++ A+S +F+MLE GL+PN+ T+ + LSAC+K GAL +G+RIH Y ++NG++L++A ALVDMYAKCG + A+ VF KDI +W+ MI GWA+HG + QAI+CF++MM+SG KPD VVFLA+LTAC +S +VDLGLNFFDSMR DY+IEPT+KHY LVVDLLGRAG+L+EA + ++ MPI+PD W AL+ AC+AHK + AE VS+ LL L+P+ GSY+FL +A+ G +DVE+ R+ +Q + + GWSYIE++GQ++ F AGD+ HK +EI LKL+EI+S A ++GY P W +H+IEEEEKE+ G HSEKLAL + T+PGTTIRI+KNLR+CGDCHSLMK SK+SQR+I+LRD ++FHHFK G CSCGDYW Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 1.664e-153 Identity = 264/640 (41.25%), Postives = 378/640 (59.06%), Query Frame = -3 Query: 591 IKSTETTLQLRQIHAQILR----RHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVS---HFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERN--IGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2483 I + T L QIHA ++ R ++A + + + + YA IFN ++ F +N +IRG +E+ ++ ++ + +M + V P++ TFP VLK+ A G G +HG +K G D FV +LV MYV GF K +L + +I EK M + +R+ I WN I+G M+ GD A LFD+M+++ VVSW T+++G S NG + A+ +F +M + +RPN +TLVS L A +++G+LE G +H Y ++G+R++ +AL+DMY+KCG I A VFE +++ TWS MI G+AIHG G AI CF KM +G++P V ++ LLTACSH G V+ G +F M +EP ++HY +VDLLGR+G LDEA +FI MPI PD V W AL ACR N++M + V+ L+ + P G+YV LSN+YA+ G W +V +R+ M+ + + KDPG S I+++G +H FV D H +A+EI L EI R GY P T VL N+EEE+KE+ L HSEK+A AF L++TSPG IRIVKNLR+C DCHS +K SK+ +R+I +RD KRFHHF+ G CSC DYW Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC---GFM-----------KDARVLFYKNII---------EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 474.552 bits (1220), Expect = 1.121e-152 Identity = 268/713 (37.59%), Postives = 406/713 (56.94%), Query Frame = -3 Query: 591 DPLKTHFS-SLIKSTETTLQLRQIHAQILRRHLSSSA---NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERN---------------------------KSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI-----------------GS---------W-------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVE--NGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2513 D ++ H S SL+ + +T LR IHAQ+++ L ++ + +S + +PYA+S+F +L ++N + RG +S S++ ++ M+ + P+ TFPFVLKS A G +HG ++K G + D +V SL+ MYV+ + A +VFD+SP R+ + ++ WN +I+G + GN ++A+ELF+ M + N+ GS W N+ I+ K G+L A LF+ + KDV+SW T++ G + +++AL +F +ML G PND+T++S L ACA +GA++ G IH Y + G+ + +L+DMYAKCG+I +A +VF K + +W+ MI+G+A+HG + F +M GI+PD + F+ LL+ACSHSG +DLG + F +M DY + P ++HY ++DLLG +G EA + I M + PD V W +L AC+ H N+++ E +E L+++EP++PGSYV LSN+YA+ GRW +V + R L+ ++ + K PG S IE++ VH F+ GD H R REIY LEE+ + G++P+T VL +EEE KE AL HSEKLA+AF L++T PGT + IVKNLRVC +CH K SK+ +REII RD RFHHF+ GVCSC DYW Sbjct: 29 DSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 469.929 bits (1208), Expect = 1.766e-151 Identity = 250/676 (36.98%), Postives = 393/676 (58.14%), Query Frame = -3 Query: 591 FSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFD--ESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIG-SWNSFINGL--------------------------------------MKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2495 ++SLI S QL+QIHA++L L S L T LI SSS I +A +F+ +F +NA+IRG + N+HFQ ++ + M RV PD TFP +LK+ +GL +G +H ++ + G + D FV+ L+ +Y K +G A VF+ PER +I+ W +++ + G +A+E+F M + ++ W + ++ L K G + A LFD+MK +++ W +++G ++NG ++A+ MF +M+ +RP+ +++ SA+SACA++G+LE ++ Y + R + ++AL+DM+AKCG++ A VF+ T ++D+ WS MI G+ +HG +AI ++ M G+ P+ V FL LL AC+HSG V G FF+ M D+ I P +HY V+DLLGRAG LD+A + I+ MP+ P WGAL AC+ H+++++ E +++L ++P + G YV LSN+YAA W+ V VR+ M+ + + KD G S++EV G++ +F GD H R EI ++E I S +E G++ LH++ +EE E+ L SHSE++A+A+ L++T GT +RI KNLR C +CH+ K SK+ REI++RD RFHHFK GVCSCGDYW Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER----TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 3.147e-151 Identity = 262/708 (37.01%), Postives = 397/708 (56.07%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSS--ANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQ-RVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPE--------------------------RNIGSW-------------NSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVS-------------------------------QNGDHQKALSMFFKM-LEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEE-KEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 SLI+ + QL+Q H ++R S + ++ SS S+ YA +F+ + F +N LIR S+ FL M+ + + P+K TFPF++K+ A + LG LHG +KS V D FV SL+ Y ++ A +VF E++ ++ WN +ING + G+ +KA+ELF+ M R + S+ N+ ++ K G + A +LFD M+EKD V+WTT+++G + QNG +AL +F ++ L+ ++ N +TLVS LSACA++GALE G IH+Y ++G+R+N +AL+ MY+KCG++ + +VF +++D+ WS MI G A+HG +A+ F KM + +KP+ V F + ACSH+G VD + F M +Y I P KHY +VD+LGR+G L++A+KFI+ MPI P WGAL AC+ H N+ +AE+ +LL LEP++ G++V LSN+YA +G+WE+V +R M+ + K+PG S IE++G +H F++GD+ H + ++Y KL E++ + GY PE VL IEEEE KE +L HSEKLA+ + L++T IR++KNLRVCGDCHS+ K S++ REII+RD RFHHF+ G CSC D+W Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD----VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1) HSP 1 Score: 464.922 bits (1195), Expect = 1.623e-150 Identity = 247/641 (38.53%), Postives = 372/641 (58.03%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSSA-------NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAG-DHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 +L++S + L+ IH +LR HL S L + + + YA IF+ + +LF+FN LIR + + + + ML+ R+ PD +TFPF++K+ + + +G H +I++ G + D +V SLV MY + A ++F + R+ ++ W ++ G CK G +E A E+F+ MP RN+ +W+ ING KN KA+ LF+ MK + VV+ N+ +VS +S+CA +GALE G R + Y V++ + +N ALVDM+ +CG+I A VFE E D +WS +I G A+HG +A+ F +M+ G P V F A+L+ACSH G V+ GL +++M+ D+ IEP ++HY +VD+LGRAG+L EA FI +M + P+ GAL AC+ +KN ++AE V L++++P+H G YV LSN+YA G+W+ +E +R +M+ + V K PGWS IE++G+++ F G D H +I K EEI+ R GY TG +++EEEKE ++ HSEKLA+A+ +M T PGTTIRIVKNLRVC DCH++ K S++ RE+I+RD RFHHF+ GVCSC DYW Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD----VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA-------------------------------NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 3.965e-148 Identity = 244/627 (38.92%), Postives = 363/627 (57.89%), Query Frame = -3 Query: 591 QLRQIHAQILRRHL---SSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHN-IEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2459 +L+QIHA++L+ L S + S+S +PYA +F+ FL+N +IRG + + + S+ + ML + TFP +LK+ + L +H +I K G E D + N LIN GN + A LF+ +PE + SWNS I G +K G ++ A+ LF +M EK+ +SWTT+++G Q +++AL +F +M + P++++L +ALSACA++GALE G IH+Y + +R++ L+DMYAKCG + A +VF+ K+K ++ W+ +I G+A HG +AI F +M GIKP+ + F A+LTACS++G V+ G F SM DY+++PT++HY +VDLLGRAG LDEA +FIQ MP+ P+ V WGAL ACR HKNI++ E + E L+ ++P H G YV +N++A +W+ R LM+ Q V K PG S I + G H F+AGD H +I K + E GY+PE +L + ++++E+E + HSEKLA+ + L+ T PGT IRI+KNLRVC DCH + K SK+ +R+I++RD RFHHF+ G CSCGDYW Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV-----------------------------------NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 457.988 bits (1177), Expect = 5.144e-147 Identity = 250/672 (37.20%), Postives = 377/672 (56.10%), Query Frame = -3 Query: 591 SLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNI----------------------GSW------------NSFINGLMKN-----GDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2489 +LI T L+QIH ++ HL L LL+ + + Y+ +F+H+ ++FL+N+LI G N F ++ FL + + + TFP VLK+ R LG+ LH ++K G D SL+ +Y + A ++FDE P+R S++ W L +G G +A++LF+ M E + G W NSF+ + N G + KA +FD M EKD+V+W+T++ G + N ++ + +F +ML+ L+P+ ++V LS+CA +GAL+ G + + N A AL+DMYAKCG + +VF+E KEKDI + I G A +G + F + GI PD FL LL C H+G + GL FF+++ Y+++ T++HY +VDL GRAG LD+A + I MP+ P+ + WGAL CR K+ ++AE V ++L+ LEP + G+YV LSN+Y+ GRW++ VR +M + + K PG+S+IE+ G+VH F+A D H + +IY KLE++ + R G++P T +V ++EEEEKE LG HSEKLA+A L++T G IR+VKNLRVCGDCH +MK SK+++REI++RD RFH F G CSC DYW Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 1.964e-146 Identity = 251/641 (39.16%), Postives = 375/641 (58.50%), Query Frame = -3 Query: 591 HFSSLIKSTETTLQLRQIHAQILRRHLSSSA--NXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQR-VRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKD-IRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAR-EQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2498 H SL+ S + L QIH ++ + + + +L S ++PYA + F+FN L+RG +E+ +SV+ F+ M+R+ V PD +F FV+K+V G +H + +K G+E FV +L+ MY + FA +VFDE + N ++ WN +I C + ++ A E+F+ M RN SWN + G +K G+L A ++F EM +D VSW+T++ G++ NG ++ F ++ G+ PN+++L LSAC++ G+ E G +H + + G + AL+DMY++CGN+ A VFE +EK I +W+ MI G A+HG +A+R F +M G+ PD + F++LL ACSH+G ++ G ++F M+ Y IEP ++HY +VDL GR+G+L +A FI +MPI P + W L AC +H NI++AE V ++L L+P + G V LSN YA G+W+DV +R M Q + K WS +EV ++ F AG+ E + KL+EI+ + E GY PE L+++EEEEKED + HSEKLALAFAL S G IRIVKNLR+C DCH++MK SK+ EI++RD RFH FK G CSC DYW Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN----LVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 6.614e-145 Identity = 238/645 (36.90%), Postives = 377/645 (58.45%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHL---SSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVG-LRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMM-FSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P + LI +++ ++ QIHA ILR +L L L +S I ++L++F+ + LFLF A I + N + ++ +L + P++ TF +LKS + G ++H ++K G+ D +V LV++Y K G++ A ++F+ MPER++ S + I K G++ A LFD M E+D+VSW +++G +Q+G AL +F K+L G +P+++T+V+ALSAC++IGALE G IH + + +RLN L+DMY+KCG++ A VF +T KDI W+ MI G+A+HG+ A+R F +M +G++P + F+ L AC+H+G V+ G+ F+SM +Y I+P ++HY +V LLGRAG+L A + I+ M + D V W ++ +C+ H + + + ++E L+ L K+ G YV LSN+YA+VG +E V +VR LM+ + + K+PG S IE+ +VH F AGD +H +++EIY L +I + GY+P T VL ++EE EKE +L HSE+LA+A+ L++T PG+ ++I KNLRVC DCH++ K SK++ R+I++RD RFHHF G CSCGD+W Sbjct: 27 PPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAK-----------------------------------GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A078DLL1_BRANA (BnaA10g03000D protein OS=Brassica napus GN=BnaA10g03000D PE=4 SV=1) HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0 Identity = 378/641 (58.97%), Postives = 494/641 (77.07%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAV-GRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF SLI S + T+ LR+++AQILRR +S + + L+S SS LKS Y LSIF +S K+LF FNALIRGLTEN+ F+ S+ HF+LMLR VRPD+LTFPF LKS + LG R+LG LH +K V+ DSFVRVSLV+MY K + + +A QVFDESPER K ES+LLWNVLING C+ +L+ A LF +MPERN GSW++ I G + G+LN+A Q F+ M EK+VVSWTT++NG SQNGD++ A+S++F+M+E G++PN+ T+ + LSAC+K GALE+G+R+H Y ++NG +L++A ALVDMYAKCG + A+ VF +KDI +W+ MI GWAIHG + QAI CF++MM+SG KPD VVFLA+LTAC +SG+VDLG+NFFDSMR DY IEPT+KHY +VVDLLGRAG+L+EA + I+ MPI+PD W AL+ AC+AH + + E+VS+ L+ ++P+ GSY+FL YAA G+ DVE+ R +++ + GK GWSYIEV+GQ++ FVAGD+ HK+A+EI LKLEEIVS A E+GY+P W +H+IEEEEKE+ G HSEKLALA L+ TSPGT IRIVKNLR+CGDCHSLMK SK+SQR+I+LRD ++FHHFK G CSCGDYW Sbjct: 28 PDESHFISLIHSCKDTVSLRRVYAQILRRSFLTS-RVASQLLSCSSLLKSPDYTLSIFRYSKEKNLFTFNALIRGLTENARFECSIRHFILMLRLGVRPDRLTFPFALKSNSKLGFRWLGKALHAATVKDCVDCDSFVRVSLVDMYAKTKGLKYAYQVFDESPERIKKESVLLWNVLINGYCRAKDLQTAATLFGSMPERNSGSWSTLIKGYVDIGELNRAKQCFELMLEKNVVSWTTLINGFSQNGDYETAISIYFEMVEKGMKPNEYTVAAVLSACSKSGALESGIRVHGYVLDNGFKLDRAIGTALVDMYAKCGEVDCAANVFSNMGDKDILSWTAMIQGWAIHGRFQQAILCFREMMYSGEKPDEVVFLAVLTACLNSGEVDLGINFFDSMRLDYMIEPTLKHYLVVVDLLGRAGKLNEAHELIESMPINPDLTTWAALYRACKAHNSNRKGEMVSQNLVEIDPELRGSYIFLDKRYAATKGKHRDVEKRRKIVKER--GK--GWSYIEVDGQLNKFVAGDNSHKQAQEIRLKLEEIVSLAVERGYIPGGDWSIHDIEEEEKENVTGIHSEKLALALGLLRTSPGTVIRIVKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKEGSCSCGDYW 663
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: V4L9I4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007007mg PE=4 SV=1) HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0 Identity = 364/640 (56.88%), Postives = 488/640 (76.25%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++H SLI + + T+ LR++HA ILRR + SS + L+S SS LKS Y+LSIF + K+LF+FNALIRGL E++ F+ SV HF+LMLR VRPD+LTFPFVLKS + LG R+LG LH +K V+ DSFVRVSLV+MY K + +A QVFDESP+ K E ILLWNVLING C+ +++ A LF +MPERN GSW++ I G + NGDLN+A QLF+ M EK VVSWTT++NG SQNGD++ A+S +F+MLE G++PN+ T+ + LSAC+K GAL +G+RIH Y ++NG+ L++A AL+DMYAKCG + A+ VF + KDI +W+ MI GWA+HG + ++I CF++M+FSG KPD VVFLA+LTAC ++G+VDLG+NFFDSMR DY+IEPT+KHY LVVD+LGRAG+L++A + I+ MPI+PD W AL+ AC+AHK+ + E+VS+ LL L+P+ GSY+FL Y A G+++DVE+ R+ +Q + GWSYIE++GQ++ F AGD+ HK+A+EI LKLEEI+S A E+GY+ W +H+IEEEEKE+ G HSEKLALA ++ T+PGT IRI+KNLR+CGDCHSLMK SK+SQR+++LRD ++FHHFK G CSCGDYW Sbjct: 27 PDESHIISLIHACKDTVCLRRVHAYILRRGVLSS-RVAAQLVSSSSLLKSPDYSLSIFRYLKEKNLFVFNALIRGLAESARFKCSVRHFILMLRLGVRPDRLTFPFVLKSNSKLGFRWLGRALHAAALKDSVDCDSFVRVSLVDMYAKTGGLKYAFQVFDESPDWIKMERILLWNVLINGYCRAKDMQMATTLFGSMPERNSGSWSTLIKGYVDNGDLNRARQLFEVMPEKSVVSWTTLINGFSQNGDYESAISTYFEMLEEGMKPNEYTVAAVLSACSKSGALGSGIRIHGYILDNGINLDRAIGTALIDMYAKCGEVDCAATVFSNMRHKDILSWTAMIQGWALHGRFQESILCFRQMLFSGEKPDEVVFLAVLTACLNAGEVDLGINFFDSMRLDYAIEPTLKHYVLVVDMLGRAGKLNQAHELIENMPINPDLTTWAALYRACKAHKSNRKGEMVSQNLLELDPELRGSYIFLGKTYEAKGKYQDVEKKRLPLQKIVKERCKGWSYIELDGQLNKFAAGDNSHKQAQEIRLKLEEIISLAIERGYITGADWSIHDIEEEEKENVTGIHSEKLALALGILRTAPGTAIRIIKNLRICGDCHSLMKYVSKISQRDLLLRDARQFHHFKEGSCSCGDYW 665
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A067DYD8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006672mg PE=4 SV=1) HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0 Identity = 398/638 (62.38%), Postives = 483/638 (75.71%), Query Frame = -3 Query: 591 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2504 +TH SLI S+ +T QLRQIHAQI+ +L +S+ +TT LIS +S KSI YALSIF+H K+L +FN LIRGL ENSHFQS +SHF+ MLR VRP++LT+PFV KSVA L L LG LH I+KSGVE+D+FVRV L +MYV+L + A +VFDE+PE+NKSES+LLWNVLINGC K+G L KA+ELF MP++N+ SW S I+G M+ GDL KA +LF++M EK VVSWT ++NG SQNG+ +KAL+MFF+ML+ G+R ND T+VSALSACAK+GALEAGVR+HNY N L A ALVDMYAKCGNI +AS VF ETKEKD+ TW+ MIWG AIHG Y QAI+ FKKMM+SG +PD VFLA+LTAC +SGQV L LNFFDSMRFDY IEP++KH+T+VV+LL R G+ + + Q F KLL+L+PKHP SYV LSN+YAA GRW+DV RVR LMQ +++ KDPGWSYIEVNG VH F AG HK A+EI+ KLE+I++GAREQGYMP T WVLHNI +EEKE+ALG HSEKLALAF L+ T+PGTTI+IVK L +CGDCHSLMK ASK+SQREI+LRD RFH+FK G CSC DYW Sbjct: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQN-----SFT-----------------------KLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: D7KE83_ARALL (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_311569 PE=4 SV=1) HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0 Identity = 364/640 (56.88%), Postives = 488/640 (76.25%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF SLI + + T+ LR +HA ILRR + SS + L+S SS LKS Y+LSIF +S ++ F+FNALIRGLTEN+ F+ SV HF+LML V+PD+LTFPFVLKS + LG R+LG LH +K+ V+ DSFVRVSLV+MY K ++ A QVF+E+P+R K ESILLWNVL+NG C+ +++ A LF +MPERN GSW++ I G + NG+LN+A QLF+ M EK+VVSWTT++NG SQ GD++ A+S +F+MLE GL+PN+ T+ + LSAC+K GAL +G+RIH Y ++NG++L++A +L+DMYAKCG + A+ VF KDI +W+ MI GWA+HG + QAI+CF++MM+SG KPD VVFLA+LTAC +SG+VDLGLNFFDSMR DY+IEPT+KHY LVVDLLGRAG+LDEA + ++ MPI+PD W AL+ AC+AHK+ + ++V + LL L+P+ GSY+FL +AA G+++DVE+ R+ +Q + + G SYIE++ Q++ F A D+ HK+A+EI LKLE I+S A E+GY+P W +H+IEEEEKE G HSEKLAL L+ T+PGTTIRI+KNLR+CGDCHSLMK SK+SQR I+LRD ++FHHFK G CSCGDYW Sbjct: 27 PDESHFISLIHTCKDTVSLRLVHAHILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHKSNR-TDIVLQNLLELDPELRGSYIFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELDCQLNKFAADDYTHKQAQEIRLKLEGIISLAIERGYIPGADWSIHDIEEEEKESVTGIHSEKLALTLGLLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRGILLRDARQFHHFKDGSCSCGDYW 664
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: R0GVK3_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10008505mg PE=4 SV=1) HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0 Identity = 367/640 (57.34%), Postives = 478/640 (74.69%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF SLI + + T+ LR++HAQILRR + SS + L+S S L+S Y LSIF + K+LF+FN LIRGLTEN+ SSV HF+LMLR VRPD+LTFPFVLKS + LG R+LG LH +K+ V+ DSFVRVSLV+MY K ++ +A QVFDESP+R K ES LL NVLI G C+ +++ A +LF +MPERN GSW++ I G LN+A QLF+ M EK VV+WTT++NG SQNG ++ A+S +F+MLE GL+PN+ T+ +ALSAC+K GAL +G+RIH Y ++NG+RL++A AL+DMYAKCG + A VF KDI +W+ MI GWA+HG + QAI+CF++MM+SG KPD VVFLA+LTAC +SG+VDLGLNFFDSMR DY+IEPT+KHY LVVDLLGRAG+L+EA KF+ MPI+PDF W AL+ A +AH++ + E+VS+ LL L+P+ GSY+FL + A G+++DVE R+ Q + GWSYIE++ Q++ F AGD HK+ +EI LKLEEI+S A E GY+P W +H+IEEEEKE G HSEKLAL ++ T+PGTTIRI+KNLR+CGDCHSLMK SK+SQR I+LRD ++FHHFK G CSCGDYW Sbjct: 34 PDESHFISLIHACKDTVSLRRVHAQILRRGVLSS-RVAAQLVSCSGLLQSPDYCLSIFRNFEEKNLFVFNVLIRGLTENARSASSVRHFILMLRLGVRPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTRQLNYAFQVFDESPDRIKKESTLLSNVLIKGYCRAKDMQMATKLFRSMPERNSGSWSTLIKGYADCSQLNRAKQLFELMPEKHVVTWTTLINGFSQNGYYETAISTYFEMLEKGLKPNEYTVAAALSACSKSGALGSGIRIHAYILDNGIRLDRAIGTALIDMYAKCGEVDCAGTVFSNMNHKDILSWTAMIQGWAVHGCFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHKFVDNMPINPDFTTWAALYRASKAHRSNRRTEIVSQNLLELDPELRGSYIFLDKTHLANGKYQDVEERRVPYQKTGKERSLGWSYIELDCQLNKFAAGDCTHKQTQEIRLKLEEIISLATEIGYIPGADWSIHDIEEEEKEHVTGVHSEKLALTLGILRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRGILLRDARQFHHFKDGSCSCGDYW 672
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A0D3C7M6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 760.755 bits (1963), Expect = 0.000e+0 Identity = 365/640 (57.03%), Postives = 487/640 (76.09%), Query Frame = -3 Query: 591 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2510 P ++HF LI S + LR+++AQILRR L +S + + L+S SS LKS Y LSIF +S K+LF+FNALIRGLTEN+ F+ S+ HF++MLR VRPD+LTFPFVLKS + LG R+LG LH +K V+ DSFVRVSLV+MY K + + +A QVFDESPER K E +LLWNVLING C+ +++ A LF +MPERN GSW++ I G + +G+LN+A Q F+ M EK+VVS TT++NG SQN +++ A+S++F+M+E G++PN+ T+ + LSAC+K GALE+G+R+H Y ++NG +L++A ALVDMYAKCG + A+ VF +KDI +W+ MI GWA+HG + QAI CF++MM+SG KPD VVFLA+LTAC +SG+VDLG+NFFDSMR DY+IEPT+KHY +VVDLLGRAG+L+EA + I+ MPI PD W AL+ AC+AH + + E+VS+ L+ ++ + GSY+FL+ A G+ +DVE+ R+ +Q + GWSYIEV+GQ++ FVAGD HK+A+EI LKLEEIVS A E+GY+P W +H+IEEEEKE+ G HSEKLALA L+ T+PGT IRIVKNLR+CGDCHSLMK S++ QREI+LRD ++FHHFK G CSCGDYW Sbjct: 28 PDESHFIPLIHSCKDIASLRRVYAQILRRSLLTS-RVASQLLSCSSLLKSPDYTLSIFRYSKEKNLFVFNALIRGLTENARFECSLRHFIMMLRLGVRPDRLTFPFVLKSNSKLGFRWLGKALHAATVKDCVDCDSFVRVSLVDMYGKTKGLKYAYQVFDESPERIKKEGVLLWNVLINGYCRAKDMQTAATLFGSMPERNSGSWSTLIKGYVDSGELNRAKQCFELMPEKNVVSLTTLINGFSQNDEYETAISIYFEMVEKGMKPNEYTVAAVLSACSKSGALESGIRVHGYVLDNGFKLDRAIGTALVDMYAKCGEVDCAANVFSNMGDKDILSWTAMIQGWAVHGRFQQAILCFREMMYSGEKPDEVVFLAVLTACLNSGEVDLGINFFDSMRLDYAIEPTLKHYVVVVDLLGRAGKLNEAHELIESMPIKPDLTTWAALYRACKAHNSNRKGEMVSQNLVEIDTELRGSYIFLAE---AKGKHQDVEKRRLPLQKMVKERCKGWSYIEVDGQLNKFVAGDDSHKQAQEIRLKLEEIVSLAVERGYIPGGDWSIHDIEEEEKENVTGIHSEKLALALGLLRTAPGTVIRIVKNLRICGDCHSLMKYVSRIKQREILLRDARQFHHFKEGSCSCGDYW 663
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: M4DFT4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra015357 PE=4 SV=1) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 354/610 (58.03%), Postives = 464/610 (76.07%), Query Frame = -3 Query: 687 PLKTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVG-LRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAV-GRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMK 2510 P ++HF SLI S + T+ LR+++AQILRR +S + + L+S SS LKS Y LSIF +S K+LF FNALIRGLTEN+ F+ S+ HF+LMLR VRPD+LTFPF LKS + LG R+LG LH +K V+ DSFVRVSLV+MY K + + +A QVFDESPER K ES+LLWNVLING C+ +L+ A LF +MPERN GSW++ I G + G+LN+A Q F+ M EK+V+SWTT++NG SQNG+++ A+S++F M+E G ++PN+ T+ + LSAC+K GALE+G+R+H Y ++NG +L++A ALVDMYAKCG + A+ VF KDI +W+ MI GWAIHG + QAI CF++MM+SG KPD VVFLA+LTAC +SG+VDLG+NFFDSMR DY IEPT+KHY +VVDLLGRAG+L+EA + I+ MPI+PD W AL+ AC+AH + + E+VS+ L+ ++P+ GSY+FL YAA G+ DVE+ R +++ + GK GWSYIEV+GQ++ FVAGD+ HK+A+EI LKLEEIVS A E GY+P W +H+IEEEEKE+ G HSEKLALA L+ TSPGT IRIVKNLR+CGDCHSLMK Sbjct: 442 PDESHFISLIHSCKDTVSLRRVYAQILRRSFLTS-RVASQLLSCSSLLKSPDYTLSIFRYSKEKNLFTFNALIRGLTENARFECSIRHFILMLRLGVRPDRLTFPFALKSNSKLGFRWLGKALHAATVKDCVDCDSFVRVSLVDMYAKTKGLKYAYQVFDESPERIKKESVLLWNVLINGYCRAKDLQTAETLFGSMPERNSGSWSTLIKGYVDIGELNRAKQCFELMPEKNVLSWTTLINGFSQNGEYETAISIYFNMVEKGCMKPNEYTVAAVLSACSKSGALESGIRVHGYVLDNGFKLDRAIGTALVDMYAKCGEVDCAANVFSNMGVKDILSWTAMIQGWAIHGRFQQAILCFREMMYSGEKPDEVVFLAVLTACLNSGEVDLGINFFDSMRLDYMIEPTLKHYVVVVDLLGRAGKLNEAHELIESMPINPDLTTWAALYRACKAHNSNRKGEMVSQNLVEIDPELRGSYIFLDKRYAATKGKHRDVEKRRKIVKER--GK--GWSYIEVDGQLNKFVAGDNSHKQAQEIRLKLEEIVSLAVESGYLPGGDWSIHDIEEEEKENVTGIHSEKLALALGLLRTSPGTVIRIVKNLRICGDCHSLMK 1046
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: M0TR71_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0 Identity = 313/638 (49.06%), Postives = 414/638 (64.89%), Query Frame = -3 Query: 591 HFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXX--XXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 2498 H S+I S+++ QL+Q+H ++LR L +A L L+S + S L+++PYAL++F HS S +F+AL+R L S F +++SHF+L+ R +RP +L FPF LKS A L LH KSG++ D FVR S+V+MYVKL GFA E L M LFE+MP R++ SWNS I G M+ GD A++LF +M +K+VVSWTT+V GV +PN+ T+ SALSACA++GALE G+RIH++ +++G R N ALV MY+KCG I A++VF+ +D+ TW+ MI GWAIHG + +A+RCF++M I+PD VFLA+L ACSHSG+V+ GL FDSMRF+Y IEPT+KHYT +VDL GRAGRL++AM ++ MP+ PDFV WGA F ACRA+KN+++AE+ +EKLL PKH +VR +M++ + + PGWSYIEV G H FVAGD H R++EIY KLEE+ + A+EQGY P+T WVLHNIE+E+KE++LG HSEKLALA L++T G IRIVKN RVCGDCH LMK ASK+ + IILRDIKRFHHFK G CSCGDYW Sbjct: 19 HLISIIHSSKSAFQLKQVHGRVLRLRLPLTARLAAQLVSAACSPHLRAVPYALALFRHSP-PSPPVFDALVRALASCSLFSAALSHFVLITRSGLRPSRLAFPFALKSAAALPSPRHAACLHAAAAKSGLDLDLFVRTSIVDMYVKL---GFA-------------ECAL------------------MVLFESMPVRSVASWNSLIQGYMRQGDAQSAVELFHQMTQKNVVSWTTMVAGV---------------------QPNEFTISSALSACARMGALERGIRIHDFALKSGFRENGVIGTALVAMYSKCGKIELAAQVFDVMDRRDLLTWTSMILGWAIHGHWAKALRCFEEMKCECIEPDEAVFLAMLMACSHSGKVERGLQIFDSMRFEYKIEPTIKHYTCMVDLFGRAGRLNDAMSLMKAMPMEPDFVLWGAFFNACRANKNVELAEVAAEKLLNFRPKH---------------------QVRTVMKDSGIERLPGWSYIEVEGGGHRFVAGDRSHPRSKEIYGKLEELATRAKEQGYEPDTDWVLHNIEDEDKEESLGCHSEKLALALGLLSTPIGADIRIVKNRRVCGDCHLLMKFASKLCNKVIILRDIKRFHHFKDGRCSCGDYW 579
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A078G0W6_BRANA (BnaC05g02860D protein OS=Brassica napus GN=BnaC05g02860D PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 260/454 (57.27%), Postives = 352/454 (77.53%), Query Frame = -3 Query: 591 LEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHPGSYVFLSNVYAAVGRWEDVERVRMLMQNQAVGKDPGWSYIEVNGQVHSFVAGDHDHKRAREIYLKLEEIVSGAREQGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALMNTSPGTTIRIVKNLRVCGDCHSLMKCASKMSQREIILRDIKRFHHFKYGVCSCGDYW 1952 ++ A LF +MPERN GSW++ I G + +G+LN+A Q F+ M EK+VVS TT++NG SQN +++ A+S++F+M+E G++PN+ T+ + LSAC+K GALE+G+R+H Y ++NG +L++A ALVDMYAKCG + A+ VF +KDI +W+ MI GWA+HG + QAI CF++MM+SG KPD VVFLA+LTAC +SG+VDLG+NFFDSMR DY+IEPT+KHY +VVDLLGRAG+L+EA + I+ MPI PD W AL+ AC+AH + + E+VS+ L+ ++P+ GSY+FL+ A G+ +DVE+ R+ +Q + GWSYIEV+GQ++ FVAGD HK+A+EI LKLEEIVS A E+GY+P W +H+IEEEEKE+ G HSEKLALA L+ T+PGT IRIVKNLR+CGDCHSLMK S++ QREI+LRD ++FHHFK G CSCGDYW Sbjct: 1 MQTAATLFGSMPERNSGSWSTLIKGYVNSGELNRAKQCFELMPEKNVVSLTTLINGFSQNDEYETAISIYFEMVEKGMKPNEYTVAAVLSACSKSGALESGIRVHGYVLDNGFKLDRAIGTALVDMYAKCGEVDCAANVFSNMGDKDILSWTAMIQGWAVHGRFQQAILCFREMMYSGEKPDEVVFLAVLTACLNSGEVDLGINFFDSMRLDYAIEPTLKHYVVVVDLLGRAGKLNEAHELIESMPIKPDLTTWAALYRACKAHNSNRKGEMVSQNLVEIDPELRGSYIFLAE---AKGKHQDVEKRRLPLQKMVKERCKGWSYIEVDGQLNKFVAGDDSHKQAQEIRLKLEEIVSLAVERGYIPGGDWSIHDIEEEEKENVTGIHSEKLALALGLLRTAPGTVIRIVKNLRICGDCHSLMKYVSRIKQREILLRDARQFHHFKEGSCSCGDYW 451 HSP 2 Score: 74.3294 bits (181), Expect = 1.517e-10 Identity = 54/254 (21.26%), Postives = 115/254 (45.28%), Query Frame = -3 Query: 1623 ALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAM------PERNIGSWNSFINGLMKNGDLNKAMQLFDEMK-----EKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVE 2351 A F K++ LI G ++N +++++S + M+ + ++P++ T VL + + G G+ +HG ++ +G + D + +LV+MY K E+ A VF +++ IL W +I G G ++A+ F M P+ + + + + + +G+++ + FD M+ E + + +V+ + + G +A + M ++P+ T + AC + G + VE Sbjct: 35 AKQCFELMPEKNVVSLTTLINGFSQNDEYETAISIYFEMVEKGMKPNEYTVAAVLSACSKSGALESGIRVHGYVLDNGFKLDRAIGTALVDMYAKCGEVDCAANVFSNMGDKD----ILSWTAMIQGWAVHGRFQQAILCFREMMYSGEKPDEVV--FLAVLTACLNSGEVDLGINFFDSMRLDYAIEPTLKHYVVVVDLLGRAGKLNEAHELIESM---PIKPDLTTWAALYRACKAHNSNRKGEMVSQNLVE 279
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Match: A0A067DXZ0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006672mg PE=4 SV=1) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 292/469 (62.26%), Postives = 364/469 (77.61%), Query Frame = -3 Query: 1098 KTHFSSLIKSTETTLQLRQIHAQILRRHLSSSANXXXXXXXXXXXXXXIPYALSIFNHSHHKSLFLFNALIRGLTENSHFQSSVSHFLLMLRQRVRPDKLTFPFVLKSVAGLGLRFLGLILHGRIIKSGVEFDSFVRVSLVEMYVKLEEMGFALQVFDESPERNKSESILLWNVLINGCCKVGNLEKAMELFEAMPERNIGSWNSFINGLMKNGDLNKAMQLFDEMKEKDVVSWTTIVNGVSQNGDHQKALSMFFKMLEVGLRPNDLTLVSALSACAKIGALEAGVRIHNYFVENGLRLNKATAAALVDMYAKCGNILSASKVFEETKEKDIRTWSVMIWGWAIHGFYGQAIRCFKKMMFSGIKPDAVVFLALLTACSHSGQVDLGLNFFDSMRFDYSIEPTMKHYTLVVDLLGRAGRLDEAMKFIQRMPISPDFVAWGALFCACRAHKNIKMAELVSEKLLRLEPKHP 2504 +TH SLI S+ +T QLRQIHAQI+ +L +S+ +TT LIS +S KSI YALSIF+H K+L +FN LIRGL ENSHFQS +SHF+ MLR VRP++LT+PFV KSVA L L LG LH I+KSGVE+D+FVRV L +MYV+L + A +VFDE+PE+NKSES+LLWNVLINGC K+G L KA+ELF MP++N+ SW S I+G M+ GDL KA +LF++M EK VVSWT ++NG SQNG+ +KAL+MFF+ML+ G+R ND T+VSALSACAK+GALEAGVR+HNY N L A ALVDMYAKCGNI +AS VF ETKEKD+ TW+ MIWG AIHG Y QAI+ FKKMM+SG +PD VFLA+LTAC +SGQV L LNFFDSMRFDY IEP++KH+T+VV+LL R G++D+A+ FI +MP +PDFV WGALFCACR HK+ K+A++ + L P Sbjct: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQVDKALNFINKMPETPDFVIWGALFCACRTHKDTKIAKIALQSSCSLNLSIP 499 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097138 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097138 ID=g.barbadense_cottongen_reftransV1_0097138; Name=g.barbadense_cottongen_reftransV1_0097138; organism=Gossypium barbadense; type=contig; length=2716bpback to top |