g.barbadense_cottongen_reftransV1_0097136, g.barbadense_cottongen_reftransV1_0097136 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097136
Unique Name	g.barbadense_cottongen_reftransV1_0097136
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2172

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
At12	chromosome	g.barbadense_cottongen_reftransV1_0097136:1..2172 . At12:3077982..3082262 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.196e-21
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = -1

Query: 1162 NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1629
            N E  AL  ++  L DP  V ++WD   V+PC+W  ++C S N VI L   + ++SGTL   +  L +L+   L  N+ISG+IP E+ +L  L  LDL  NRF GEIP S + L +L++LRLNNN+L+G  P  L+ + +L   D+S N+L G +P
Sbjct:   32 NPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.216e-21
Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = -1

Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632
             N E  AL +++ ++ D   VL  WD   V+PCTW  V C S   V+ L++ +  +SG L   + +L HL    L  N ++G IP ELG L  L  LDL GNRF GEIP S   L  L +LRL+ N L+G +P  +  LS L   D+S N+L G  P
Sbjct:   36 VNYEVAALMSVKNKMKDEKEVLSGWDINSVDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.339e-21
Identity = 66/161 (40.99%), Postives = 96/161 (59.63%), Query Frame = -1

Query: 1165 AISTNSEGNALHALRRRLSDPTNVLQSWDPTL-VNPCTWFHVTCDSHNH-VIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTI 1641
            A + N+EG AL A++   S+  N+L  WD     + C+W  V CD+ ++ V+ L+L + N+ G + P +  L++LQ  +L  N ++G+IP E+GN  +LV LDL  N   G+IP S S LK L  L L NN LTG +P  LT + NLK  D++ N L G I
Sbjct:   23 ASAMNNEGKALMAIKGSFSNLVNMLLDWDDVHNSDLCSWRGVFCDNVSYSVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLAGQIPDEIGNCASLVYLDLSENLLYGDIPFSISKLKQLETLNLKNNQLTGPVPATLTQIPNLKRLDLAGNHLTGEI 183

HSP 2 Score: 65.0846 bits (157), Expect = 1.749e-9
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = -1

Query: 1162 NHVIR-LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1503
            N V++ L L  + ++GTL  ++ QL  L YF++  N+++G IP+ +GN  +   LD+  N+  GEIP +  G   +  L L  N LTG IP  +  +  L V D+S+N+L G IP
Sbjct:  190 NEVLQYLGLRGNMLTGTLSSDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFQILDISYNQITGEIPYNI-GFLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIP 303

HSP 3 Score: 64.3142 bits (155), Expect = 3.210e-9
Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = -1

Query: 1156 ISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1467
            +SG++      L  L Y  L  N+  G+IP ELG++ NL  LDL GN F G IP +   L+ L  L L+ N+L+G +P E   L ++++ DVS N L G IP +
Sbjct:  394 LSGSIPLAFRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTE 497

HSP 4 Score: 62.7734 bits (151), Expect = 1.009e-8
Identity = 48/125 (38.40%), Postives = 70/125 (56.00%), Query Frame = -1

Query: 1135 HVI---RLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1500
            H+I   +LDL  +N SG++   L  L+HL    L +N +SG++P E GNL+++  +D+  N   G IP     L++L  L LNNN L G IP +LT    L   +VS N+L G +P    F  F+
Sbjct:  428 HIINLDKLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTELGQLQNLNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVPPMKNFSRFA 552

HSP 5 Score: 62.003 bits (149), Expect = 1.601e-8
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = -1

Query: 1156 RLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1491
            +L L  + ++G +  EL  +  L Y +L  N + G IP ELG L+ L  L+L  NR  G IP + S   +L    ++ N L+GSIP     L +L   ++S+N+  G IPV+
Sbjct:  314 KLYLHGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFNVHGNLLSGSIPLAFRNLGSLTYLNLSSNNFKGKIPVE 425

HSP 6 Score: 61.6178 bits (148), Expect = 2.273e-8
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = -1

Query: 1159 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPV 1488
            L L ++ + GT+ PEL +L+ L    L  N + G IP  + +   L   +++GN   G IP +F  L SL +L L++NN  G IP EL  + NL   D+S N+  G+IP+
Sbjct:  339 LQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFNVHGNLLSGSIPLAFRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIPL 448

HSP 7 Score: 56.6102 bits (135), Expect = 8.575e-7
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = -1

Query: 1162 PTLVNPCTWFHVTCDSHNH-------------VIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1554
            P  +  CT F +   S+N              V  L L  + ++G +   +  +Q L   +L  N++ G IP  LGNL     L L+GN   G IP     +  L +L+LN+N L G+IP EL  L  L   +++NN L G IP
Sbjct:  232 PESIGNCTSFQILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIPPILGNLSFTGKLYLHGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIP 375

HSP 8 Score: 56.225 bits (134), Expect = 8.873e-7
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = -1

Query: 1159 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPV 1488
            LDL ++ + G + P L  L       L+ N ++G IP ELGN+  L  L L  N+  G IP     L+ L  L L NN L G IP  +++ + L  F+V  N L G+IP+
Sbjct:  291 LDLSDNELVGPIPPILGNLSFTGKLYLHGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFNVHGNLLSGSIPL 400

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.293e-21
Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = -1

Query: 1144 NALHALRR----RLSDPTNVLQSWDPTLVNPCTWFHVTCD-SHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFG 1617
            N + ALRR       DP  V+ +W+    +PC W  + C  S +HVI++++  S+I G L PEL Q+ +LQ   L+ N + G IPKE+GNLKNL  LDL  N   G IP     L  +  + L +N LTG +P EL  L  L+   +  N L G++ V G  G
Sbjct:   26 NEVQALRRFKEAIYEDPLLVMSNWNDPNSDPCDWTGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQGSLLVAGASG 188

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.128e-20
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = -1

Query: 1162 AISTNSEGNALHALRRR-LSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1641
            A + NS+G AL +L R   S P+++ QSW+ +   PC+W  V CD    V  L+L +  ISG  GPE++ L+HL+   L  N   G IP +LGN   L  +DL  N F G IP +   L++LR L L  N+L G  P  L ++ +L+    + N L G+IP
Sbjct:   21 AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECDRRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHLETVYFTGNGLNGSIP 181

HSP 2 Score: 75.485 bits (184), Expect = 1.205e-12
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = -1

Query: 1162 VIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1497
            +I L L  + + G +  EL  L  LQY  LY N++SGE+P  +  +++L  L LY N   GE+P   + LK L  L L  N+ TG IP++L A S+L+V D++ N   G IP
Sbjct:  334 MIDLQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLSGEVPLSIWKIQSLQSLQLYQNNLSGELPVDMTELKQLVSLALYENHFTGVIPQDLGANSSLEVLDLTRNMFTGHIP 445

HSP 3 Score: 66.6254 bits (161), Expect = 6.191e-10
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = -1

Query: 1156 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1488
            L L  +N+SG +   + ++Q LQ  +LY+N++SGE+P ++  LK LV L LY N F G IP+      SL  L L  N  TG IP  L +   LK   +  N L G++P D
Sbjct:  361 LHLYTNNLSGEVPLSIWKIQSLQSLQLYQNNLSGELPVDMTELKQLVSLALYENHFTGVIPQDLGANSSLEVLDLTRNMFTGHIPPNLCSQKKLKRLLLGYNYLEGSVPSD 471

HSP 4 Score: 63.5438 bits (153), Expect = 5.102e-9
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = -1

Query: 1156 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1488
            L L  ++ SG + PEL + + +   +L +N + GEIP ELG L  L  L LY N   GE+P S   ++SL+ L+L  NNL+G +P ++T L  L    +  N   G IP D
Sbjct:  313 LYLAGNHFSGRIPPELGKCKSMIDLQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLSGEVPLSIWKIQSLQSLQLYQNNLSGELPVDMTELKQLVSLALYENHFTGVIPQD 423

HSP 5 Score: 62.7734 bits (151), Expect = 1.063e-8
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = -1

Query: 1162 RLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1491
            RL L  +N+ G L P+  + Q+L +F+L  N+ +G IP  LGNLKN+  + L  N+  G IP     L  L  L L++N L G +P EL+    L   D S+N L G+IP
Sbjct:  480 RLILEENNLRGGL-PDFVEKQNLLFFDLSGNNFTGPIPPSLGNLKNVTAIYLSSNQLSGSIPPELGSLVKLEHLNLSHNILKGILPSELSNCHKLSELDASHNLLNGSIP 588

HSP 6 Score: 58.9214 bits (141), Expect = 1.536e-7
Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = -1

Query: 1159 TLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPV 1551
            +LV       V+C     +  + L N+  +G L P L     L+ F  +   +SG IP   G L  L  L L GN F G IP      KS+  L+L  N L G IP EL  LS L+   +  N+L G +P+
Sbjct:  247 SLVGAIPLDFVSC---KQIDTISLSNNQFTGGLPPGLGNCTSLREFGAFSCALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMIDLQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLSGEVPL 374

HSP 7 Score: 58.9214 bits (141), Expect = 1.589e-7
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = -1

Query: 1156 PE-LAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1449
            PE L  + HL+      N ++G IP  +GN+  L  L L  N+F G +P S   + +L+ L LN+NNL G++P  L  L NL   DV NN L G IP+D
Sbjct:  157 PESLLSIPHLETVYFTGNGLNGSIPSNIGNMSELTTLWLDDNQFSGPVPSSLGNITTLQELYLNDNNLVGTLPVTLNNLENLVYLDVRNNSLVGAIPLD 255

HSP 8 Score: 58.151 bits (139), Expect = 2.313e-7
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = -1

Query: 1156 ISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1467
            +SG +     QL  L    L  N  SG IP ELG  K+++ L L  N+ EGEIP     L  L++L L  NNL+G +P  +  + +L+   +  N+L G +PVD
Sbjct:  296 LSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMIDLQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLSGEVPLSIWKIQSLQSLQLYQNNLSGELPVD 399

HSP 9 Score: 57.7658 bits (138), Expect = 3.338e-7
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = -1

Query: 1162 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1488
            L L  +N+SG L  ++ +L+ L    LY+N  +G IP++LG   +L  LDL  N F G IP +    K L+ L L  N L GS+P +L   S L+   +  N+L G +P
Sbjct:  385 LQLYQNNLSGELPVDMTELKQLVSLALYENHFTGVIPQDLGANSSLEVLDLTRNMFTGHIPPNLCSQKKLKRLLLGYNYLEGSVPSDLGGCSTLERLILEENNLRGGLP 493

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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.924e-20
Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = -1

Query: 1162 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCT--WFHVTC-----DSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1638
            I+  ++ +AL  + R+L DP N LQ W  T  +PC   W  V C     D   HV  L L N N++G L PEL  L +L       ND++G+IP ELGNL +L+ L L GN+  G +P+    L +L  L+++ N ++G +P  L  L  LK F ++NN + G IP
Sbjct:   27 ITHPTDVSALQYVHRKLKDPLNHLQDWKKT--DPCASNWTGVICIPDPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEISGKLPTSLANLKKLKHFHMNNNSITGQIP 190

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.320e-20
Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = -1

Query: 1162 NSEGNALHALRRRLSDPTNVLQSWDPTLVNP-CTWFHVTCDSHN-HVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1629
            N+EG AL A++   S+  N+L  WD    +  C+W  V CD+ + +V+ L+L N N+ G +   L  L +LQ  +L  N + G+IP E+GN  +L  +D   N   G+IP S S LK L FL L NN LTG IP  LT + NLK  D++ N L G IP
Sbjct:   29 NNEGKALMAIKASFSNVANMLLDWDDVHNHDFCSWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFLNLKNNQLTGPIPATLTQIPNLKTLDLARNQLTGEIP 186

HSP 2 Score: 66.6254 bits (161), Expect = 5.513e-10
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = -1

Query: 1156 ISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1467
            +SG +  E   L  L Y  L  N   G+IP ELG++ NL  LDL GN F G IP +   L+ L  L L+ N+L G++P E   L ++++ DVS N L G IP +
Sbjct:  396 LSGAVPLEFRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSFNFLAGVIPTE 499

HSP 3 Score: 65.0846 bits (157), Expect = 1.939e-9
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = -1

Query: 1012 HVIRLD---LGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC*SSQLIYKLLSPFLNIKIVRSRCGCMCSLL 1500
            H+I LD   L  +N SG++   L  L+HL    L +N ++G +P E GNL+++  +D+  N   G IP     L+++  L LNNN + G IP +LT   +L   ++S N+L G IP    F  FS   +     LC     +  +  P L    V +R   +C +L
Sbjct:  430 HIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSFNFLAGVIPTELGQLQNINSLILNNNKIHGKIPDQLTNCFSLANLNISFNNLSGIIPPMKNFTRFSPASFFGNPFLC--GNWVGSICGPSLPKSQVFTRVAVICMVL 593

HSP 4 Score: 65.0846 bits (157), Expect = 1.989e-9
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = -1

Query: 1162 NHVIR-LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1503
            N V++ L L  + ++GTL P++ QL  L YF++  N+++G IP+ +GN  +   LD+  N+  G IP +  G   +  L L  N LTG IP  +  +  L V D+S+N+L G IP
Sbjct:  192 NEVLQYLGLRGNMLTGTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDVSYNQITGVIPYNI-GFLQVATLSLQGNKLTGRIPEVIGLMQALAVLDLSDNELTGPIP 305

HSP 5 Score: 64.3142 bits (155), Expect = 3.468e-9
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = -1

Query: 1159 RLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLK----------NLVGL--------------DLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPV 1491
            +L L  + ++G + PEL  +  L Y +L  N++ G+IP ELG L+          NLVGL              +++GN   G +P  F  L SL +L L++N+  G IP EL  + NL   D+S N+  G+IP+
Sbjct:  316 KLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIPSNISSCAALNQFNVHGNFLSGAVPLEFRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIPL 450

HSP 6 Score: 60.077 bits (144), Expect = 6.075e-8
Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = -1

Query: 1162 PTLVNPCTWFHVTCDSHNH-------------VIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1554
            P  +  CT F +   S+N              V  L L  + ++G +   +  +Q L   +L  N+++G IP  LGNL     L L+GN+  G+IP     +  L +L+LN+N L G IP EL  L  L   +++NN+L G IP
Sbjct:  234 PESIGNCTSFEILDVSYNQITGVIPYNIGFLQVATLSLQGNKLTGRIPEVIGLMQALAVLDLSDNELTGPIPPILGNLSFTGKLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIP 377

HSP 7 Score: 59.6918 bits (143), Expect = 8.053e-8
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = -1

Query: 1156 HVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1500
             +  L+L N+N+ G +   ++    L  F ++ N +SG +P E  NL +L  L+L  N F+G+IP     + +L  L L+ NN +GSIP  L  L +L + ++S N L GT+P +
Sbjct:  361 QLFELNLANNNLVGLIPSNISSCAALNQFNVHGNFLSGAVPLEFRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAE 475

HSP 8 Score: 58.5362 bits (140), Expect = 1.958e-7
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = -1

Query: 1156 LDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVD 1488
            LDL ++ ++G + P L  L       L+ N ++G+IP ELGN+  L  L L  N   G+IP     L+ L  L L NNNL G IP  +++ + L  F+V  N L G +P++
Sbjct:  293 LDLSDNELTGPIPPILGNLSFTGKLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIPSNISSCAALNQFNVHGNFLSGAVPLE 403

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.336e-20
Identity = 65/175 (37.14%), Postives = 89/175 (50.86%), Query Frame = -1

Query: 1102 EGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSH-NHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1623
            +G AL + R  ++   + +  W P   +PC W  VTCD+    VI L+L    I G L P++ +L HL+   L+ N + G IP  LGN   L  + L  N F G IP     L  L+ L +++N L+G IP  L  L  L  F+VSNN L G IP DG    FS   +    +LC
Sbjct:   33 DGEALLSFRNAVTRSDSFIHQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLC 207

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5524_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana GN=At5g65240 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.611e-20
Identity = 71/176 (40.34%), Postives = 96/176 (54.55%), Query Frame = -1

Query: 1117 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNIS-GTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHF 1641
            ++S +++G+AL ALR  L      L  W+   V+PCTW  V CD   HV  + L   N S GTL   +  L  L+   L  N I G IP+ +GNL +L  LDL  N     IP +   LK+L+FL L+ NNL GSIP  LT LS L    + +N+L G IP      +F +P+Y+F
Sbjct:   17 SVSPDAQGDALFALRSSLRASPEQLSDWNQNQVDPCTWSQVICDDKKHVTSVTLSYMNFSSGTLSSGIGILTTLKTLTLKGNGIMGGIPESIGNLSSLTSLDLEDNHLTDRIPSTLGNLKNLQFLTLSRNNLNGSIPDSLTGLSKLINILLDSNNLSGEIPQ----SLFKIPKYNF 188

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5371_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g63710 OS=Arabidopsis thaliana GN=At5g63710 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.036e-20
Identity = 64/170 (37.65%), Postives = 89/170 (52.35%), Query Frame = -1

Query: 1117 EGNALHALRRRLSDPTNVLQSWDPTLVNPC-TWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHF 1623
            EG AL  LR  L+D +N L+ W    V+PC +W +VTC   + V+ L+L +S  +GTL P + +L+ L   EL  N +SG +P  LGN+ NL  L+L  N F G IP S+S                         LSNLK  D+S+N+L G+IP       FS+P + F
Sbjct:   53 EGGALLQLRDSLNDSSNRLK-WTRDFVSPCYSWSYVTCRGQS-VVALNLASSGFTGTLSPAITKLKFLVTLELQNNSLSGALPDSLGNMVNLQTLNLSVNSFSGSIPASWS------------------------QLSNLKHLDLSSNNLTGSIPTQ----FFSIPTFDF 192

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: V4SGD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029281mg PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.043e-84
Identity = 143/174 (82.18%), Postives = 155/174 (89.08%), Query Frame = -1

Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641
            A+STNSEGNALHALR R  DPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSNISGTLGPE+ QLQHLQY ELY NDISG+IPKELGNLK+LV +D+Y N+ EGEIPKSF+ LKSL+FLRLNNN LTGSIPRELT LS+LKVFDVSNN LCGTIPVDGPF  F M  + 
Sbjct:   17 ALSTNSEGNALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE 190

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A059AMY1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01078 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.115e-84
Identity = 142/172 (82.56%), Postives = 155/172 (90.12%), Query Frame = -1

Query: 1126 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPR 1641
            A+STNSEGNALHALR  LSDP NVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSN+SGTLGPEL QL+HL+Y ELY N +SGEIPKELGNLK LV LD+YGN+ EG+IPK+F+ LKSLRFLRLNNN LTG IPRELTALS+LKVFDVSNNDLCGTIPVDGPF  F M R
Sbjct:   20 ALSTNSEGNALHALRTGLSDPNNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNVSGTLGPELGQLKHLKYLELYMNSLSGEIPKELGNLKKLVSLDMYGNKLEGQIPKAFAKLKSLRFLRLNNNKLTGPIPRELTALSDLKVFDVSNNDLCGTIPVDGPFANFQMER 191

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A022RFB5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013673mg PE=4 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.119e-83
Identity = 142/174 (81.61%), Postives = 152/174 (87.36%), Query Frame = -1

Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641
             +STNSEGNALHALR R SDP NVLQSWDPTLVNPCTWFHVTCDS+NHV+RLDLGNSNISGTLGPEL +L+HLQY ELYKN+I G IPKELGNL  LV +DLYGN+F G IPKSF+ LKSLRFLRLN+N LTGSIPRELT LSNLKVFDVSNN LCGTIPVDGPFG F M  Y 
Sbjct:   21 VLSTNSEGNALHALRTRFSDPINVLQSWDPTLVNPCTWFHVTCDSNNHVVRLDLGNSNISGTLGPELGELKHLQYLELYKNNIGGRIPKELGNLAKLVSMDLYGNKFNGNIPKSFANLKSLRFLRLNDNKLTGSIPRELTTLSNLKVFDVSNNHLCGTIPVDGPFGSFPMESYE 194

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A068TPH8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_1 OS=Coffea canephora GN=GSCOC_T00014533001 PE=4 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.518e-83
Identity = 141/173 (81.50%), Postives = 157/173 (90.75%), Query Frame = -1

Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641
             +STNSEGNALHALR RL DP NVLQSWDPTLVNPCTWFHVTCDS+NHV+RLDLGNSNISG+LG EL +L+HLQY ELY+N+I G+IPKELGNL++LV +DLYGN+FEG+IPKSF+ LKSLRFLRLN+N LTGSIPRELT LSNLKVFDVSNNDLCGTIPVDGPFG F M  Y
Sbjct:   21 TLSTNSEGNALHALRSRLFDPKNVLQSWDPTLVNPCTWFHVTCDSNNHVVRLDLGNSNISGSLGRELGELKHLQYLELYRNNIIGKIPKELGNLESLVSMDLYGNKFEGKIPKSFAKLKSLRFLRLNDNKLTGSIPRELTKLSNLKVFDVSNNDLCGTIPVDGPFGSFPMESY 193

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A059AMP0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01078 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.794e-83
Identity = 141/174 (81.03%), Postives = 155/174 (89.08%), Query Frame = -1

Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641
            A+STNSEGNALHALR  LSDP NVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSN+SGTLGPEL QL+HL+Y ELY N +SGEIPKELGNLK LV LD+YGN+ EG+IPK+F+ LKSLRFLRLNNN LTG IPRELTALS+LKVFDVSNNDLCGTIPVDGPF  F M  + 
Sbjct:   20 ALSTNSEGNALHALRTGLSDPNNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNVSGTLGPELGQLKHLKYLELYMNSLSGEIPKELGNLKKLVSLDMYGNKLEGQIPKAFAKLKSLRFLRLNNNKLTGPIPRELTALSDLKVFDVSNNDLCGTIPVDGPFANFQMESFE 193

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A067L7N0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16304 PE=4 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.736e-82
Identity = 138/171 (80.70%), Postives = 153/171 (89.47%), Query Frame = -1

Query: 1120 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1632
            TNSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSN+SGTLGPEL QLQHLQY ELY+NDI G+IPKELG LKNL+ +D+Y N+FEG+IPKS + LKSLRFLRLNNN L+GSIPRE T L++LKVFDVSNN+LCGTIPVDGPF  F M  + 
Sbjct:   25 TNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLELYRNDIGGKIPKELGKLKNLISIDMYENKFEGKIPKSLAKLKSLRFLRLNNNKLSGSIPREFTTLNDLKVFDVSNNELCGTIPVDGPFATFPMESFE 195

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A9PH97_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09390g PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.066e-82
Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = -1

Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641
            ++STNSEGNAL ALR RLSDPTN LQSWDP LV+PCTWFHVTCDS+NHV RLDLGNSNISGTLGPEL QL+HL+Y ELY+NDI G+IPKELGNLKNLV +D+YGN+FEGEIPKSF+ LKSL FLRLNNN L+GSIPREL  L +LKVFDVSNN+LCGTIPVDGPF  F M  +
Sbjct:   20 SLSTNSEGNALQALRSRLSDPTNALQSWDPALVSPCTWFHVTCDSNNHVTRLDLGNSNISGTLGPELGQLKHLKYLELYRNDIGGKIPKELGNLKNLVSMDMYGNKFEGEIPKSFAKLKSLVFLRLNNNKLSGSIPRELATLKDLKVFDVSNNNLCGTIPVDGPFASFPMESF 192

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: S5FVI7_CAMSI (Putative serine-threonine protein kinase OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 9.871e-82
Identity = 139/174 (79.89%), Postives = 155/174 (89.08%), Query Frame = -1

Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641
             +STNSEGNALHALR R SDPTNVLQSWDPTLVNPCTWFHVTCDS NHVIRLDLGN NISG+LG EL +L+HLQY ELY+N+I G+IPKELGNLK+L+ +DLYGN+FEGEIPKSF+ LKSLRFLRLNNNNL G IPRELT L++LK+FDVSNNDLCGTIPVDGPFG F M  + 
Sbjct:   40 TLSTNSEGNALHALRSRFSDPTNVLQSWDPTLVNPCTWFHVTCDSSNHVIRLDLGNCNISGSLGSELGELKHLQYLELYRNNIGGKIPKELGNLKSLISMDLYGNKFEGEIPKSFAKLKSLRFLRLNNNNLQGPIPRELTTLTDLKIFDVSNNDLCGTIPVDGPFGNFRMESFE 213

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: D7SXS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00560 PE=4 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.866e-81
Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = -1

Query: 1120 NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1629
            NSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS+N VIRLDLGNSNISG+LGPEL QLQHLQY ELY+N+  G+IPKELGNLKNL+ +DLY N+FEG+IPKS + LKSLRFLRLNNN LTGSIPREL  LSNLKVFDVSNN+LCGTIPVDGPF  F M  + 
Sbjct:   25 NSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNRVIRLDLGNSNISGSLGPELGQLQHLQYLELYRNNFEGKIPKELGNLKNLISMDLYDNKFEGKIPKSIAKLKSLRFLRLNNNKLTGSIPRELATLSNLKVFDVSNNNLCGTIPVDGPFANFPMESFQ 194

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0B2SDH7_GLYSO (Somatic embryogenesis receptor kinase 1 OS=Glycine soja GN=glysoja_020039 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.567e-80
Identity = 135/174 (77.59%), Postives = 155/174 (89.08%), Query Frame = -1

Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641
            ++STN EGNALHALR R+SDP NVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSN+SGTLGPEL QLQHLQY ELY+N+++G+IPKELGNLK+L+ +DLY N+ EG+IPKSF  LKSL+FLRLNNN LTGSIPRELT L+NLK+FDVSNNDLCGTIPV+G F  F M  + 
Sbjct:   20 SLSTNPEGNALHALRSRISDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLELYRNELTGKIPKELGNLKSLISMDLYDNKLEGKIPKSFGKLKSLKFLRLNNNKLTGSIPRELTRLTNLKIFDVSNNDLCGTIPVEGNFESFPMESFE 193

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
Y2239_ARATH	1.196e-21	42.31	Probable LRR receptor-like serine/threonine-protei...	[more]
Y5457_ARATH	1.216e-21	41.40	Probable LRR receptor-like serine/threonine-protei...	[more]
ERL1_ARATH	2.339e-21	40.99	LRR receptor-like serine/threonine-protein kinase ...	[more]
Y1634_ARATH	3.293e-21	39.26	Probable LRR receptor-like serine/threonine-protei...	[more]
RPK1_IPONI	2.128e-20	39.13	Receptor-like protein kinase OS=Ipomoea nil GN=INR...	[more]
Y5374_ARATH	2.924e-20	38.55	Probable LRR receptor-like serine/threonine-protei...	[more]
ERL2_ARATH	3.320e-20	41.77	LRR receptor-like serine/threonine-protein kinase ...	[more]
FEI1_ARATH	3.336e-20	37.14	LRR receptor-like serine/threonine-protein kinase ...	[more]
Y5524_ARATH	3.611e-20	40.34	Probable LRR receptor-like serine/threonine-protei...	[more]
Y5371_ARATH	9.036e-20	37.65	Probable LRR receptor-like serine/threonine-protei...	[more]

Pages

BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
V4SGD1_9ROSI	1.043e-84	82.18	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A059AMY1_EUCGR	1.115e-84	82.56	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
A0A022RFB5_ERYGU	1.119e-83	81.61	Uncharacterized protein OS=Erythranthe guttata GN=...	[more]
A0A068TPH8_COFCA	1.518e-83	81.50	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
A0A059AMP0_EUCGR	1.794e-83	81.03	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
A0A067L7N0_JATCU	2.736e-82	80.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A9PH97_POPTR	4.066e-82	79.19	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
S5FVI7_CAMSI	9.871e-82	79.89	Putative serine-threonine protein kinase OS=Camell...	[more]
D7SXS8_VITVI	1.866e-81	81.76	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A0B2SDH7_GLYSO	1.567e-80	77.59	Somatic embryogenesis receptor kinase 1 OS=Glycine...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain, L domain-like	GENE3D	3.80.10.10		coord: 104..260 e-value: 1.7E-46 score: 157.8
IPR032675	Leucine-rich repeat domain, L domain-like	SUPERFAMILY	52058	L domain-like	coord: 103..262
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 104..143 e-value: 1.4E-9 score: 38.0
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 195..217 e-value: 1.5 score: 9.4
None	No IPR available	PANTHER	PTHR27001:SF224	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	coord: 84..267
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 84..267
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 98..279
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..97
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 65..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..64
None	No IPR available	TMHMM	TMhelix		coord: 70..92
None	No IPR available	TMHMM	TMhelix		coord: 41..63

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097136 ID=g.barbadense_cottongen_reftransV1_0097136; Name=g.barbadense_cottongen_reftransV1_0097136; organism=Gossypium barbadense; type=contig; length=2172bp
GACTATTAAGATATTTTAACCTAAATTTAACCATATCCTTAAAGAATAAT
GGCAAATATTAATCAAAACAAAATATAGCAATATTATGGTGATAAATTTA
CATTTTAACCCTTTTATCTTTACTACATATACCCCAACCCATCTTTATAG
AATTTGCAGTTTCGCCCCTCTTTGAACAGTCTTCCCTAAGGCCTTAAGTC
CCTACTTCGATGTCCATTCAATAAGACATGAGTTTCAAGGTAAAGATATC
AATATATGTATATATTGATAGCATGACCAACTCTAACAACGATATTTCAT
GCTTGACATGTAAAAAAATCAAAAGGCTTAAAACCTAGCATCATGTTATT
TTATAGATTATATAGATACAGAGTAGAGCATCTCACTATCCACTCCTACA
TAAAAATCAGCATGGGGATGTCACCAGGGATTTTGCGCTCATGAGTTTGA
CAAACATTGGTTTCTTCAGCAGCCGAAGTTATAAGGCACGAGTCCTTTCA
GCTCTGGCCCATTCAAGCGCATGTTGCTTGCATAGCTGGAACACAGAGAG
CAATCGAAAATCATGACATCAAAACAAAACAAGCAACTGCACTTTTGCCT
ATTAACATTTTTTCTTTCACCATAACGTATTAGCTTAAATTTTTTGACTT
TGTGATAAAGGCGGTGCTACGGCCTCACATTCTGTTACAACTACTTGGAC
ACCATATCATGAACATTATTACACACATGCAGATAGCCTGTGTTTTAGGT
GAAGTCAGGTGTTAAGCATATTCCCATTACTTGAACTTAATATAATCAAA
ATAGTATTAGGCTTCTACTTTTGCAGCTAATTCCTTTCACTCCCAAGGCA
ATCATTCGAAAGCAATTCTCATAGTGCACTAATGTCCGATGCAAGCAGCA
GTTACATCTATGCAGGCATCACTAGTACATGTCCTAATGGATACACCTAG
CATTCATGCAAATAGATTAGAGGGCTCAGTTACTTCCATCTCATTCTCAT
GCTTCTTCTTCAAGCAATGAACACATACAACCACATCGACTTCTTACAAT
TTTTATATTTAAAAAAGGGCTTAAAAGCTTGTAAATCAACTGTGATGATC
AACAGAGAGAGCAATAAAAATGGTACCTTGGCATTGAGAACATCCCGAAA
GGGCCATCAACCGGGATAGTCCCGCAGAGATCATTATTAGAAACATCGAA
TACTTTAAGGTTAGAGAGGGCAGTAAGCTCCCGTGGAATGGATCCTGTCA
AGTTATTGTTGTTCAGACGAAGGAATCTCAGTGACTTCAGTCCGGAAAAA
GACTTGGGAATTTCTCCTTCGAACCGGTTACCATACAAATCCAAGCCAAC
AAGGTTCTTCAGATTCCCCAACTCCTTTGGAATTTCCCCACTTATGTCAT
TTTTGTACAGCTCGAAGTACTGGAGATGTTGGAGTTGAGCTAGCTCAGGA
CCCAAAGTTCCAGAGATATTAGAGTTCCCCAAGTCCAAGCGAATCACATG
ATTGTGGGAATCACAGGTGACATGAAACCAAGTACAGGGATTGACAAGCG
TAGGGTCCCAACTCTGCAACACATTGGTAGGGTCAGAAAGCCTCCTCCTT
AAAGCATGCAGAGCATTTCCTTCAGAGTTAGTTGAAATGGCAGGGGAAAG
AAGTGGAAGGAGAAAACAAAGGGACAAGGAAATCACAGCGAGAGGAGCCA
TTTGCAGATGGAGAGAAAGGATGAAGAAGAAAGAACCGAACTCAGAGAAG
AAAAAAAGGGTTAATAGGGAAGGAGAGAGATAGCAGATAGAAATGAAGGA
AGTAAAAAAGCGAGTCAAATGTGGTGGAAATGCATGAAGAAATAGAGTTT
TCTTTTTAAAAATTGAAGTTGGTTTGGAGCAGAAAGAAAGAAAGAAAGAG
AAATGGGAAAGTGGGGAGTGGTGGAAAAGGTCACACAATGGGCGTGTGTG
CCGCGTGGATTTGGTCCCCACTTTGGAGGCTGCTTCGCCTCAGTTCAGTT
GAGTTCTCAAGCCTACTCTCTCTGACTTTCTTCTTTCTTGGACTCTACTT
AACAGTGATGAAACTTGGAAGCTTCCTCCCTCTTCTCTTCCACCTTTACT
TATTCCAATACTTTTTCCTGTAATTACTACATAAACCTATTTTTTTCTTC
ATGATCTCGATTTCAATAAGGA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR013210	LRR_N_plant-typ
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.barbadense_cottongen_reftransV1_0097136, g.barbadense_cottongen_reftransV1_0097136 (contig) Gossypium barbadense

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