g.barbadense_cottongen_reftransV1_0097136, g.barbadense_cottongen_reftransV1_0097136 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 5.008e-52 Identity = 108/178 (60.67%), Postives = 130/178 (73.03%), Query Frame = -1 Query: 1102 STNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1635 S N EG+ALH LR L DP NVLQSWDPTLVNPCTWFHVTC++ N VIR+DLGN+ +SG L PEL L++LQY ELY N+I+G IP LGNL NLV LDLY N F G IP+S L LRFLRLNNN+LTGSIP LT ++ L+V D+SNN L G++P +G F +F+ + LC Sbjct: 25 SANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLC 202
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.044e-52 Identity = 106/178 (59.55%), Postives = 132/178 (74.16%), Query Frame = -1 Query: 1102 STNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1635 S+N EG+ALH+LR L DP NVLQSWDPTLVNPCTWFHVTC++ N VIR+DLGN+++SG L P+L QL++LQY ELY N+I+G +P +LGNL NLV LDLY N F G IP S L LRFLRLNNN+LTG IP LT + L+V D+SNN L G++P +G F +F+ + LC Sbjct: 28 SSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLC 205
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 1.698e-49 Identity = 102/168 (60.71%), Postives = 126/168 (75.00%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 +S N+EG+AL AL+ L+DP VLQSWD TLV PCTWFHVTC+S N V R+DLGN+N+SG L +L QL +LQY ELY N+I+G IP++LGNL LV LDLY N G IP + LK LRFLRLNNN+L+G IPR LTA+ L+V D+SNN L G IPV+G F +F+ Sbjct: 23 VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFT 190
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.700e-45 Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLS--DPTN-VLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 ++ N+EG+AL L+ LS DP N VLQSWD TLV PCTWFHVTC+ N V R+DLGN+ +SG L PEL QL +LQY ELY N+I+GEIP+ELG+L LV LDLY N G IP S L LRFLRLNNN+L+G IP LT++ L+V D+SNN L G IPV+G F +F+ Sbjct: 27 VAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSFSLFT 196
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 4.616e-42 Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLSD---PTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 ++ ++ +AL ALR LS N+LQSW+ T V PC+WFHVTC++ N V RLDLG++N+SG L P+LAQL +LQY EL+ N+I+GEIP+ELG+L LV LDL+ N G IP S L LRFLRL NN+L+G IPR LTAL L V D+SNN L G IPV+G F F+ Sbjct: 22 VTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISNNRLSGDIPVNGSFSQFT 191
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.925e-24 Identity = 74/174 (42.53%), Postives = 100/174 (57.47%), Query Frame = -1 Query: 1117 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHF 1638 +S +++G+AL ALR L N L W+ VNPCTW V CD N V L L + N SGTL + L++L+ L N I+GEIP++ GNL +L LDL N+ G IP + LK L+FL L+ N L G+IP LT L NL + +N L G IP +F +P+Y+F Sbjct: 25 VSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNF 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.072e-24 Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL ++ L DP VL +WD V+PC+W VTC S N VI L + N+SGTL P + L +L+ L N+I G+IP E+G L L LDL N F GEIP S L+SL++LRLNNN+L+G P L+ ++ L D+S N+L G +P Sbjct: 38 VNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.487e-23 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL A++ L+DP VL++WD V+PC+W V+C + +V LDL + ++SGTL P + L +LQ L N I+G IP+ +G L+ L LDL N F GEIP S LK+L +LRLNNN+L G+ P L+ + L + D+S N+L G++P Sbjct: 32 VNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.226e-23 Identity = 70/157 (44.59%), Postives = 97/157 (61.78%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL ++ L+DP VL +WD T V+PC+W +TC S VIRL+ + N+SGTL + L +LQ L N I+G IP E+G L L LDL N F G+IP + S K+L++LR+NNN+LTG+IP L ++ L D+S N+L G +P Sbjct: 39 VNFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.123e-22 Identity = 68/156 (43.59%), Postives = 93/156 (59.62%), Query Frame = -1 Query: 1162 NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1629 N E AL ++R L DP L +WD V+PC+W +TC N VI L + ++SG L + L +L+ L N+ISG+IP ELG L L LDL NRF G+IP S L SL++LRLNNN+L+G P L+ + +L D+S N+L G +P Sbjct: 35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: V4SGD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029281mg PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.043e-84 Identity = 143/174 (82.18%), Postives = 155/174 (89.08%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 A+STNSEGNALHALR R DPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSNISGTLGPE+ QLQHLQY ELY NDISG+IPKELGNLK+LV +D+Y N+ EGEIPKSF+ LKSL+FLRLNNN LTGSIPRELT LS+LKVFDVSNN LCGTIPVDGPF F M + Sbjct: 17 ALSTNSEGNALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE 190
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A059AMY1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01078 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.115e-84 Identity = 142/172 (82.56%), Postives = 155/172 (90.12%), Query Frame = -1 Query: 1126 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPR 1641 A+STNSEGNALHALR LSDP NVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSN+SGTLGPEL QL+HL+Y ELY N +SGEIPKELGNLK LV LD+YGN+ EG+IPK+F+ LKSLRFLRLNNN LTG IPRELTALS+LKVFDVSNNDLCGTIPVDGPF F M R Sbjct: 20 ALSTNSEGNALHALRTGLSDPNNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNVSGTLGPELGQLKHLKYLELYMNSLSGEIPKELGNLKKLVSLDMYGNKLEGQIPKAFAKLKSLRFLRLNNNKLTGPIPRELTALSDLKVFDVSNNDLCGTIPVDGPFANFQMER 191
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A022RFB5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013673mg PE=4 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.119e-83 Identity = 142/174 (81.61%), Postives = 152/174 (87.36%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 +STNSEGNALHALR R SDP NVLQSWDPTLVNPCTWFHVTCDS+NHV+RLDLGNSNISGTLGPEL +L+HLQY ELYKN+I G IPKELGNL LV +DLYGN+F G IPKSF+ LKSLRFLRLN+N LTGSIPRELT LSNLKVFDVSNN LCGTIPVDGPFG F M Y Sbjct: 21 VLSTNSEGNALHALRTRFSDPINVLQSWDPTLVNPCTWFHVTCDSNNHVVRLDLGNSNISGTLGPELGELKHLQYLELYKNNIGGRIPKELGNLAKLVSMDLYGNKFNGNIPKSFANLKSLRFLRLNDNKLTGSIPRELTTLSNLKVFDVSNNHLCGTIPVDGPFGSFPMESYE 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A068TPH8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_1 OS=Coffea canephora GN=GSCOC_T00014533001 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.518e-83 Identity = 141/173 (81.50%), Postives = 157/173 (90.75%), Query Frame = -1 Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641 +STNSEGNALHALR RL DP NVLQSWDPTLVNPCTWFHVTCDS+NHV+RLDLGNSNISG+LG EL +L+HLQY ELY+N+I G+IPKELGNL++LV +DLYGN+FEG+IPKSF+ LKSLRFLRLN+N LTGSIPRELT LSNLKVFDVSNNDLCGTIPVDGPFG F M Y Sbjct: 21 TLSTNSEGNALHALRSRLFDPKNVLQSWDPTLVNPCTWFHVTCDSNNHVVRLDLGNSNISGSLGRELGELKHLQYLELYRNNIIGKIPKELGNLESLVSMDLYGNKFEGKIPKSFAKLKSLRFLRLNDNKLTGSIPRELTKLSNLKVFDVSNNDLCGTIPVDGPFGSFPMESY 193
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A059AMP0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01078 PE=4 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 1.794e-83 Identity = 141/174 (81.03%), Postives = 155/174 (89.08%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 A+STNSEGNALHALR LSDP NVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSN+SGTLGPEL QL+HL+Y ELY N +SGEIPKELGNLK LV LD+YGN+ EG+IPK+F+ LKSLRFLRLNNN LTG IPRELTALS+LKVFDVSNNDLCGTIPVDGPF F M + Sbjct: 20 ALSTNSEGNALHALRTGLSDPNNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNVSGTLGPELGQLKHLKYLELYMNSLSGEIPKELGNLKKLVSLDMYGNKLEGQIPKAFAKLKSLRFLRLNNNKLTGPIPRELTALSDLKVFDVSNNDLCGTIPVDGPFANFQMESFE 193
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A067L7N0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16304 PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.736e-82 Identity = 138/171 (80.70%), Postives = 153/171 (89.47%), Query Frame = -1 Query: 1120 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1632 TNSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSN+SGTLGPEL QLQHLQY ELY+NDI G+IPKELG LKNL+ +D+Y N+FEG+IPKS + LKSLRFLRLNNN L+GSIPRE T L++LKVFDVSNN+LCGTIPVDGPF F M + Sbjct: 25 TNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLELYRNDIGGKIPKELGKLKNLISIDMYENKFEGKIPKSLAKLKSLRFLRLNNNKLSGSIPREFTTLNDLKVFDVSNNELCGTIPVDGPFATFPMESFE 195
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A9PH97_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09390g PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.066e-82 Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = -1 Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641 ++STNSEGNAL ALR RLSDPTN LQSWDP LV+PCTWFHVTCDS+NHV RLDLGNSNISGTLGPEL QL+HL+Y ELY+NDI G+IPKELGNLKNLV +D+YGN+FEGEIPKSF+ LKSL FLRLNNN L+GSIPREL L +LKVFDVSNN+LCGTIPVDGPF F M + Sbjct: 20 SLSTNSEGNALQALRSRLSDPTNALQSWDPALVSPCTWFHVTCDSNNHVTRLDLGNSNISGTLGPELGQLKHLKYLELYRNDIGGKIPKELGNLKNLVSMDMYGNKFEGEIPKSFAKLKSLVFLRLNNNKLSGSIPRELATLKDLKVFDVSNNNLCGTIPVDGPFASFPMESF 192
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: S5FVI7_CAMSI (Putative serine-threonine protein kinase OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 9.871e-82 Identity = 139/174 (79.89%), Postives = 155/174 (89.08%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 +STNSEGNALHALR R SDPTNVLQSWDPTLVNPCTWFHVTCDS NHVIRLDLGN NISG+LG EL +L+HLQY ELY+N+I G+IPKELGNLK+L+ +DLYGN+FEGEIPKSF+ LKSLRFLRLNNNNL G IPRELT L++LK+FDVSNNDLCGTIPVDGPFG F M + Sbjct: 40 TLSTNSEGNALHALRSRFSDPTNVLQSWDPTLVNPCTWFHVTCDSSNHVIRLDLGNCNISGSLGSELGELKHLQYLELYRNNIGGKIPKELGNLKSLISMDLYGNKFEGEIPKSFAKLKSLRFLRLNNNNLQGPIPRELTTLTDLKIFDVSNNDLCGTIPVDGPFGNFRMESFE 213
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: D7SXS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00560 PE=4 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.866e-81 Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = -1 Query: 1120 NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1629 NSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS+N VIRLDLGNSNISG+LGPEL QLQHLQY ELY+N+ G+IPKELGNLKNL+ +DLY N+FEG+IPKS + LKSLRFLRLNNN LTGSIPREL LSNLKVFDVSNN+LCGTIPVDGPF F M + Sbjct: 25 NSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNRVIRLDLGNSNISGSLGPELGQLQHLQYLELYRNNFEGKIPKELGNLKNLISMDLYDNKFEGKIPKSIAKLKSLRFLRLNNNKLTGSIPRELATLSNLKVFDVSNNNLCGTIPVDGPFANFPMESFQ 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0B2SDH7_GLYSO (Somatic embryogenesis receptor kinase 1 OS=Glycine soja GN=glysoja_020039 PE=4 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 1.567e-80 Identity = 135/174 (77.59%), Postives = 155/174 (89.08%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 ++STN EGNALHALR R+SDP NVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSN+SGTLGPEL QLQHLQY ELY+N+++G+IPKELGNLK+L+ +DLY N+ EG+IPKSF LKSL+FLRLNNN LTGSIPRELT L+NLK+FDVSNNDLCGTIPV+G F F M + Sbjct: 20 SLSTNPEGNALHALRSRISDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLELYRNELTGKIPKELGNLKSLISMDLYDNKLEGKIPKSFGKLKSLKFLRLNNNKLTGSIPRELTRLTNLKIFDVSNNDLCGTIPVEGNFESFPMESFE 193 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097136 ID=g.barbadense_cottongen_reftransV1_0097136; Name=g.barbadense_cottongen_reftransV1_0097136; organism=Gossypium barbadense; type=contig; length=2172bpback to top |