g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0096985
Unique Name	g.barbadense_cottongen_reftransV1_0096985
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2125

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
At04	chromosome	g.barbadense_cottongen_reftransV1_0096985:1..2099 . At04:53364400..53375208 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP6 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=tadA PE=1 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP3 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=tadA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP8 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=tadA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.228e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: B9SZ91_RICCO (tRNA-specific adenosine deaminase subunit TAD2, putative OS=Ricinus communis GN=RCOM_1056370 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.064e-58
Identity = 113/150 (75.33%), Postives = 132/150 (88.00%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C+LYVTCEPCIMCAAALS LGI++VYYGCAN+KFGGCGSIL LHSS ++   S  V Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+
Sbjct:   67 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHRPV 216

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: S8E893_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_02680 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 7.100e-58
Identity = 109/149 (73.15%), Postives = 127/149 (85.23%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571
            CVII+D ++I+ GRNRT ETRNATR+AEMEAID LLE WQR+GL++ EV   FS C LYVTCEPCIMCAAALS +GIK+VYYGCAN+KFGGCGSILSLH+   E  +S  V ++GFKCTGG++ASEAI+L RSFYEQGNPNAPKPHR L
Sbjct:   26 CVIIEDQKVISSGRNRTNETRNATRHAEMEAIDELLERWQRNGLTRTEVVSRFSNCTLYVTCEPCIMCAAALSIMGIKEVYYGCANDKFGGCGSILSLHTEGPEKLVSAAV-RKGFKCTGGILASEAINLLRSFYEQGNPNAPKPHRAL 173

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067LPW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07982 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.160e-57
Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574
            CVI++ G +I  GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS   +P  S++  Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+ 
Sbjct:   88 CVIVEGGIVIGSGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLNSEEAAQWKGFKCTGGVMASEAVSLLRCFYEQGNPNAPKPHRPVT 238

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0B2QCW1_GLYSO (tRNA-specific adenosine deaminase 2 OS=Glycine soja GN=glysoja_005829 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.705e-57
Identity = 107/152 (70.39%), Postives = 131/152 (86.18%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTT+TRNATR+AEMEA+D LL  WQ+ GLS +EVA+ FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH S + P  ++  P + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHRPL ++
Sbjct:   30 CVIVEDGKVIASGRNRTTQTRNATRHAEMEAVDVLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHLSNTTPLNNEVSPGKCFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRPLARQ 181

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: D7KC23_ARALL (EMB2191 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_314252 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.940e-57
Identity = 109/155 (70.32%), Postives = 132/155 (85.16%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLH--SSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583
            CV+++DG++IA GRNRT ETRNATR+AEMEAID L+  WQ DGLS ++VA+ FS+CILYVTCEPCIMCA+ALSFLGIK+VYYGC N+KFGGCGSILSLH  SS S   I +    +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ++
Sbjct:   36 CVLLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSSQSSDIIEESQRGKGYKCRGGIMAEEAVSLFKCFYEQGNPNAPKPHRPVVQRE 190

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: V7CBJ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G141300g PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 4.179e-57
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LL  WQ++GLS AEVA+ F  C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLHSS + P  ++    + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHR L ++
Sbjct:   30 CVIVEDGKVIATGRNRTTETRNATRHAEMEAIDVLLGQWQKNGLSMAEVAEKFLNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHSSNTTPVNNEVSSGKSFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRSLARQ 181

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067JUZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00132 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.559e-57
Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574
            CVI++ G +IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS   +P I ++  Q +GFKCT G+MASEA+SL R FY+QGNPNAPKPHRP+ 
Sbjct:   88 CVIVEGGIVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLIREEAAQWKGFKCTRGVMASEAVSLLRCFYKQGNPNAPKPHRPVT 238

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A078I0C2_BRANA (BnaC06g01770D protein OS=Brassica napus GN=BnaC06g01770D PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.990e-57
Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI +DG++IA GRNRT ETRNATR+AEMEAID L+  W++DGLS ++VA+ FS+C+LYVTCEPCIMCA+ALSFLGIK+VYYGCAN+KFGGCGS+LSLH   S+  IS+K  + +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ+
Sbjct:   37 CVITEDGKVIASGRNRTNETRNATRHAEMEAIDELVGPWRKDGLSPSQVAERFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCANDKFGGCGSVLSLHLVSSD--ISEKTQRGKGYKCRGGIMADEAVSLFKCFYEQGNPNAPKPHRPVVQR 187

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A2Q4B8_MEDTR (CMP/dCMP deaminase, zinc-binding OS=Medicago truncatula GN=MTR_7g086830 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.434e-56
Identity = 110/153 (71.90%), Postives = 128/153 (83.66%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKV-PQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ++GLS  EVAK FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH       +SD V P +GFKC GG+MA EA+ L R+FYEQGNPNAPKPHRPL  +
Sbjct:   30 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGSILSLH-------LSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQGNPNAPKPHRPLAHQ 175

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: M5XQM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020315mg PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.652e-56
Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 3

Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE W+   LS++EVAK FS+C LYVTCEPCIMCAAALSF+GIK+V+YGC N+KFGGCGSILSLHSS SEP IS   P+  GFKC GG+MASEA+SLFRSFYEQGNPNAPKPHRPL Q+  +
Sbjct:   36 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDTLLEQWREKRLSQSEVAKIFSKCKLYVTCEPCIMCAAALSFIGIKEVFYGCGNDKFGGCGSILSLHSSSSEPLISGGAPRGEGFKCNGGIMASEAVSLFRSFYEQGNPNAPKPHRPLAQQATQ 191

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 13


Match Name	E-value	Identity	Description
TADA_STRP6	1.735e-10	31.88	tRNA-specific adenosine deaminase OS=Streptococcus...	[more]
TADA_STRP3	1.735e-10	31.88	tRNA-specific adenosine deaminase OS=Streptococcus...	[more]
TADA_STRP8	2.228e-10	31.88	tRNA-specific adenosine deaminase OS=Streptococcus...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9SZ91_RICCO	1.064e-58	75.33	tRNA-specific adenosine deaminase subunit TAD2, pu...	[more]
S8E893_9LAMI	7.100e-58	73.15	Uncharacterized protein (Fragment) OS=Genlisea aur...	[more]
A0A067LPW9_JATCU	1.160e-57	74.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A0B2QCW1_GLYSO	1.705e-57	70.39	tRNA-specific adenosine deaminase 2 OS=Glycine soj...	[more]
D7KC23_ARALL	1.940e-57	70.32	EMB2191 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]
V7CBJ0_PHAVU	4.179e-57	71.05	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
A0A067JUZ1_JATCU	4.559e-57	73.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A078I0C2_BRANA	7.990e-57	70.59	BnaC06g01770D protein OS=Brassica napus GN=BnaC06g...	[more]
A2Q4B8_MEDTR	1.434e-56	71.90	CMP/dCMP deaminase, zinc-binding OS=Medicago trunc...	[more]
M5XQM0_PRUPE	3.652e-56	75.64	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.140.10		coord: 2..126 e-value: 6.0E-35 score: 119.8
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 2..133
None	No IPR available	PANTHER	PTHR11079:SF92	TRNA-SPECIFIC ADENOSINE DEAMINASE 2	coord: 2..133
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PFAM	PF00383	dCMP_cyt_deam_1	coord: 2..72 e-value: 1.7E-10 score: 40.5
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 1..92 score: 17.273
IPR016193	Cytidine deaminase-like	SUPERFAMILY	53927	Cytidine deaminase-like	coord: 2..130

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0096985 ID=g.barbadense_cottongen_reftransV1_0096985; Name=g.barbadense_cottongen_reftransV1_0096985; organism=Gossypium barbadense; type=contig; length=2125bp
ATGGAAAGTGATAATCTTGCATACATGGAACTTGCAATTCACCAGGCAAA
ACTTGCTTCGGAAAGCCTTGAAGTGCCTGTTGGGTAATTATTAACCTCAT
AAATTTCGTTTCTCCCTTAACCAACCTTCTCCATTTATTGGATGAAAATA
TGAATTTAGCTTCTCTTTTGTTACTAATGTAGATTGGCATTGCTTTGCAC
GACCTGGGAAAAAAAACTAAAAATGTTATATGAAGTACAACACGACACAA
ATACATAAAGATTCCAAAATCTATATAACAGAAATTATGAACTTATTAGG
TTGGTTATAACCTATATAATTAACATTATTAGGATTTAGAAACACTTGAA
AAAGTTTTGAGTTGAGGAATTGTACTGAATTTGGTGTTATGATTAATATG
TTTGGATGAAATCTGCTTGCAATGGTAGACATAAAGAAATATACTAAGGT
GAACAAAGAGCTGAAATACCCTAAAAGGTTTATGAGGACCTATTTATAGT
ACATTCCATAGGATTAAAAATGGAAATCTGTAATAACTTAAACAGATTCT
AAACAATGTAATTATTGCCTTCAAGGTTCACCTAATTTGAACATTTAAAT
TAAAAAGAAAAGAAGTAATGGCTTTTCCGACGGGTGCATTAGTTCTACCT
AGAAGATTGCAAAATTTAATGACACAAAGATTTGACCAATAAAAAGAACA
AGATATAAACTTAAGACTAAAATAAAATAGCATTGTCAAGCACATAATTA
TTTTTTTGGTCTCATGATTAATCTATAAATCAAAATATCACTAAGTTCTT
GGTCTTCATTGGTTGCACCATGTCATTGACTCGTGGGTTAAGTTTTATAT
TGTTGTGTGTTAAAGCATAAGCGATTGTTAACATTCTTGTAATTGATTAC
CAAGTTTTGAATCATGTAGCAATTCCTCTATTGCTACAACCAGAATTTTA
CGTTGCTGTAAACTTCATCAGATATCTGTTAACATAAATAGTTCCTCATT
ATCTTTGTCTGTGCTTTAACTTGGAGACTAAATTGTCTTCTTTTGCTCAA
GTCGATGACACATAGTCCAAGAGCAAAATTTCAATGCAATTTTTTTCTTT
TCACCATACCTTTTATCTACCAGTTGCGTAATCATCAAGGATGGGGAGCT
TATAGCCTTGGGTAGAAATCGAACCACTGAGACACGAAATGCAACAAGGT
ATGCAGAAATGGAAGCCATAGATAATCTTCTAGAGATGTGGCAGAGAGAT
GGACTTTCAAAAGCAGAAGTGGCTAAAAACTTTTCACAATGTATTTTGTA
TGTTACATGTGAACCATGCATAATGTGTGCTGCAGCTTTGTCATTTCTTG
GCATAAAAGATGTATATTATGGTTGTGCAAATGAGAAATTTGGAGGGTGC
GGATCAATTTTATCCTTGCATTCAAGTTGCTCAGAGCCTTTCATCAGTGA
TAAAGTTCCACAAAGAGGTTTCAAATGTACAGGGGGATTAATGGCCTCAG
AAGCAATCTCTCTTTTCCGAAGTTTCTATGAACAGGGGAATCCTAATGCT
CCAAAGCCTCATAGGCCTCTCGTTCAAAAGAAAGTTGAGTGATACATATA
GGTTGGTATATTCTTTTCTTAGTGATTTCAAAATACTTCTACTCTTGCCT
AGTTTCTTGAGTGATGTTCTTTGTTTCTAATTTCTTGTAAGGGTTTTGGT
GCTGTAAGGTGATTTAGGGCTGATCAAATGTTGGCGATAGAACTGCGAAG
AGAAAAGCAAATAGCAAGTCAAGGAAAAAGCTGGTTGGAGTTTGATAATG
GTAATGGCATTTTGTTCTAGTGTGCTGTTGCATGTCAGCGTCGGATTTGT
CAAAGCCACATTATAAGTCATATTTAACTGTGTTAGTGGTAGGTAGATCA
ACAGTTTGATGGTTTGATAGGATAGGTAGCTTGAGCATTCTTAAAGAACA
AGTATCATATTGATAATTTCGTTAATCTTCAGGGGCTACTTATAAAAATT
TTGTCAACTATTTTATAACAAATTTGGGCTTGAAGGGTTTCTATTAAGAT
TTTCTTCGGCGAGGTATTTTACTTGTGTATATGTACATATAATTCCAATG
TATCCTATTTCTAAGGCTTTGGTGC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002125	CMP_dCMP_dom
IPR016193	Cytidine_deaminase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003824	catalytic activity

Search form

g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense

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