g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.467e-28 Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ + E++ GRN +T+NATR+AEM AID L+ +R G S +EV F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L + S+ +P G F+CT G A EA+ + ++FY+Q NPNAPK Sbjct: 46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASA--------DLPSTGKPFQCTPGYRAEEAVEMLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.797e-27 Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 3 Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559 + C+++ + E+I GRN ET+NATR+AEM A+D +L+ W R L + + + Q +LYVT EPCIMCAAAL L I V YGC NE+FGGCGS+L + SD +P G FKC G A EA+ + ++FY+Q NPNAPKP Sbjct: 41 VPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVS--------SDHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQENPNAPKP 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.049e-27 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ + E++ GRN +T+NATR+AEM AID +L+ ++ G S +EV F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L++ S+ +P R F+C G A EA+ + ++FY+Q NPNAPK Sbjct: 46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.353e-27 Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3 Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 + C+++ + E++ GRN +T+NATR+AEM AID +L+ + G S + V F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L++ S+ +P R F+C G A EA+ L ++FY+Q NPNAPK Sbjct: 42 VPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVELLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.409e-25 Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583 C+++ D +++ GRN ET+NATR+AEM AID +L+ +++ +V F +LYVT EPCIMCA AL L I V YGC NE+FGGCGS+L++ D +P G FK GG A +A+ L ++FY+Q NPNAP R V+KK Sbjct: 29 CLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV--------AGDNIPDTGTEFKYIGGYQAEKAVELLKTFYKQENPNAP---RSKVRKK 169
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.485e-25 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ +++ GRN ET+NAT++AEM AID +L+ + + +V F +LYVT EPCIMCA AL L I V YGC NE+FGGCGS+L++ D +P G FKC GG A +AI L ++FY+Q NPNAPK Sbjct: 34 CLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVS--------GDDIPDTGTKFKCIGGYQAEKAIELLKTFYKQENPNAPK 168
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad2 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.473e-20 Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 1122 SCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPH 1562 SCV + GE+I G N T + + R+AE+ AI+ +LE + A F + LYVT EPC+MCAAAL L IK VY+GC N++FGGCGS+ S++ D+ + GL SEA+ L R FY Q N AP P Sbjct: 240 SCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSIN--------KDQSIDPSYPVYPGLFYSEAVMLMREFYVQENVKAPVPQ 369
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_YEAST (tRNA-specific adenosine deaminase subunit TAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.845e-18 Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 3 Query: 1143 GELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSL-HSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559 G+++A G N T ++ +AE ID + M G V F LYVT EPCIMCA+AL L I V +GC NE+FGG G++LS+ H +C+ + G++ G++ EAI L R FY + N APKP Sbjct: 35 GQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRG-----VVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSVNHDTCT--LVPKNNSAAGYESIPGILRKEAIMLLRYFYVRQNERAPKP 167
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP1 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M1 GN=tadA PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.689e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538 CVI+KDGE+I G N E+ A +AEM AI+ + E L+VT EPC+MC+ A+ I V YG +N+KFGG S+ + ++D+ + GL+A++ ++ ++F+ QG Sbjct: 32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRPQ (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=tadA PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538 CVI+KDGE+I G N E+ A +AEM AI+ + E L+VT EPC+MC+ A+ I V YG +N+KFGG S+ + ++D+ + GL+A++ ++ ++F+ QG Sbjct: 32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: B9SZ91_RICCO (tRNA-specific adenosine deaminase subunit TAD2, putative OS=Ricinus communis GN=RCOM_1056370 PE=4 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.064e-58 Identity = 113/150 (75.33%), Postives = 132/150 (88.00%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571 CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C+LYVTCEPCIMCAAALS LGI++VYYGCAN+KFGGCGSIL LHSS ++ S V Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+ Sbjct: 67 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHRPV 216
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: S8E893_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_02680 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 7.100e-58 Identity = 109/149 (73.15%), Postives = 127/149 (85.23%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571 CVII+D ++I+ GRNRT ETRNATR+AEMEAID LLE WQR+GL++ EV FS C LYVTCEPCIMCAAALS +GIK+VYYGCAN+KFGGCGSILSLH+ E +S V ++GFKCTGG++ASEAI+L RSFYEQGNPNAPKPHR L Sbjct: 26 CVIIEDQKVISSGRNRTNETRNATRHAEMEAIDELLERWQRNGLTRTEVVSRFSNCTLYVTCEPCIMCAAALSIMGIKEVYYGCANDKFGGCGSILSLHTEGPEKLVSAAV-RKGFKCTGGILASEAINLLRSFYEQGNPNAPKPHRAL 173
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067LPW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07982 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.160e-57 Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574 CVI++ G +I GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS +P S++ Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+ Sbjct: 88 CVIVEGGIVIGSGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLNSEEAAQWKGFKCTGGVMASEAVSLLRCFYEQGNPNAPKPHRPVT 238
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0B2QCW1_GLYSO (tRNA-specific adenosine deaminase 2 OS=Glycine soja GN=glysoja_005829 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.705e-57 Identity = 107/152 (70.39%), Postives = 131/152 (86.18%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CVI++DG++IA GRNRTT+TRNATR+AEMEA+D LL WQ+ GLS +EVA+ FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH S + P ++ P + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHRPL ++ Sbjct: 30 CVIVEDGKVIASGRNRTTQTRNATRHAEMEAVDVLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHLSNTTPLNNEVSPGKCFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRPLARQ 181
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: D7KC23_ARALL (EMB2191 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_314252 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.940e-57 Identity = 109/155 (70.32%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLH--SSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583 CV+++DG++IA GRNRT ETRNATR+AEMEAID L+ WQ DGLS ++VA+ FS+CILYVTCEPCIMCA+ALSFLGIK+VYYGC N+KFGGCGSILSLH SS S I + +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ++ Sbjct: 36 CVLLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSSQSSDIIEESQRGKGYKCRGGIMAEEAVSLFKCFYEQGNPNAPKPHRPVVQRE 190
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: V7CBJ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G141300g PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 4.179e-57 Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CVI++DG++IA GRNRTTETRNATR+AEMEAID LL WQ++GLS AEVA+ F C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLHSS + P ++ + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHR L ++ Sbjct: 30 CVIVEDGKVIATGRNRTTETRNATRHAEMEAIDVLLGQWQKNGLSMAEVAEKFLNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHSSNTTPVNNEVSSGKSFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRSLARQ 181
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067JUZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00132 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.559e-57 Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574 CVI++ G +IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS +P I ++ Q +GFKCT G+MASEA+SL R FY+QGNPNAPKPHRP+ Sbjct: 88 CVIVEGGIVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLIREEAAQWKGFKCTRGVMASEAVSLLRCFYKQGNPNAPKPHRPVT 238
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A078I0C2_BRANA (BnaC06g01770D protein OS=Brassica napus GN=BnaC06g01770D PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 7.990e-57 Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CVI +DG++IA GRNRT ETRNATR+AEMEAID L+ W++DGLS ++VA+ FS+C+LYVTCEPCIMCA+ALSFLGIK+VYYGCAN+KFGGCGS+LSLH S+ IS+K + +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ+ Sbjct: 37 CVITEDGKVIASGRNRTNETRNATRHAEMEAIDELVGPWRKDGLSPSQVAERFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCANDKFGGCGSVLSLHLVSSD--ISEKTQRGKGYKCRGGIMADEAVSLFKCFYEQGNPNAPKPHRPVVQR 187
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A2Q4B8_MEDTR (CMP/dCMP deaminase, zinc-binding OS=Medicago truncatula GN=MTR_7g086830 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.434e-56 Identity = 110/153 (71.90%), Postives = 128/153 (83.66%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKV-PQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ++GLS EVAK FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH +SD V P +GFKC GG+MA EA+ L R+FYEQGNPNAPKPHRPL + Sbjct: 30 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGSILSLH-------LSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQGNPNAPKPHRPLAHQ 175
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: M5XQM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020315mg PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.652e-56 Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE W+ LS++EVAK FS+C LYVTCEPCIMCAAALSF+GIK+V+YGC N+KFGGCGSILSLHSS SEP IS P+ GFKC GG+MASEA+SLFRSFYEQGNPNAPKPHRPL Q+ + Sbjct: 36 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDTLLEQWREKRLSQSEVAKIFSKCKLYVTCEPCIMCAAALSFIGIKEVFYGCGNDKFGGCGSILSLHSSSSEPLISGGAPRGEGFKCNGGIMASEAVSLFRSFYEQGNPNAPKPHRPLAQQATQ 191 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 13
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0096985 ID=g.barbadense_cottongen_reftransV1_0096985; Name=g.barbadense_cottongen_reftransV1_0096985; organism=Gossypium barbadense; type=contig; length=2125bpback to top |