g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0096985
Unique Nameg.barbadense_cottongen_reftransV1_0096985
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2125
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At04chromosomeg.barbadense_cottongen_reftransV1_0096985:1..2099 .
At04:53364400..53375208 +
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.467e-28
Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++ + E++  GRN   +T+NATR+AEM AID  L+  +R G S +EV   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L + S+         +P  G  F+CT G  A EA+ + ++FY+Q NPNAPK
Sbjct:   46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASA--------DLPSTGKPFQCTPGYRAEEAVEMLKTFYKQENPNAPK 180
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.797e-27
Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 3 
Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559
            +   C+++ + E+I  GRN   ET+NATR+AEM A+D +L+ W R  L + +  +   Q +LYVT EPCIMCAAAL  L I  V YGC NE+FGGCGS+L +         SD +P  G  FKC  G  A EA+ + ++FY+Q NPNAPKP
Sbjct:   41 VPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVS--------SDHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQENPNAPKP 180
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.049e-27
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++ + E++  GRN   +T+NATR+AEM AID +L+  ++ G S +EV   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L++ S+         +P   R F+C  G  A EA+ + ++FY+Q NPNAPK
Sbjct:   46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPK 180
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.353e-27
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3 
Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            +   C+++ + E++  GRN   +T+NATR+AEM AID +L+   + G S + V   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L++ S+         +P   R F+C  G  A EA+ L ++FY+Q NPNAPK
Sbjct:   42 VPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVELLKTFYKQENPNAPK 180
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.409e-25
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583
            C+++ D +++  GRN   ET+NATR+AEM AID +L+  +++     +V   F   +LYVT EPCIMCA AL  L I  V YGC NE+FGGCGS+L++          D +P  G  FK  GG  A +A+ L ++FY+Q NPNAP   R  V+KK
Sbjct:   29 CLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV--------AGDNIPDTGTEFKYIGGYQAEKAVELLKTFYKQENPNAP---RSKVRKK 169
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.485e-25
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++   +++  GRN   ET+NAT++AEM AID +L+  + +     +V   F   +LYVT EPCIMCA AL  L I  V YGC NE+FGGCGS+L++          D +P  G  FKC GG  A +AI L ++FY+Q NPNAPK
Sbjct:   34 CLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVS--------GDDIPDTGTKFKCIGGYQAEKAIELLKTFYKQENPNAPK 168
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad2 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.473e-20
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 3 
Query: 1122 SCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPH 1562
            SCV +  GE+I  G N T  + +  R+AE+ AI+ +LE +          A  F +  LYVT EPC+MCAAAL  L IK VY+GC N++FGGCGS+ S++         D+     +    GL  SEA+ L R FY Q N  AP P 
Sbjct:  240 SCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSIN--------KDQSIDPSYPVYPGLFYSEAVMLMREFYVQENVKAPVPQ 369
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_YEAST (tRNA-specific adenosine deaminase subunit TAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.845e-18
Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 3 
Query: 1143 GELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSL-HSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559
            G+++A G N T ++     +AE   ID +  M    G     V   F    LYVT EPCIMCA+AL  L I  V +GC NE+FGG G++LS+ H +C+   +       G++   G++  EAI L R FY + N  APKP
Sbjct:   35 GQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRG-----VVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSVNHDTCT--LVPKNNSAAGYESIPGILRKEAIMLLRYFYVRQNERAPKP 167
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP1 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M1 GN=tadA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.689e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRPQ (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=tadA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: B9SZ91_RICCO (tRNA-specific adenosine deaminase subunit TAD2, putative OS=Ricinus communis GN=RCOM_1056370 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.064e-58
Identity = 113/150 (75.33%), Postives = 132/150 (88.00%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C+LYVTCEPCIMCAAALS LGI++VYYGCAN+KFGGCGSIL LHSS ++   S  V Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+
Sbjct:   67 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHRPV 216
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: S8E893_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_02680 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 7.100e-58
Identity = 109/149 (73.15%), Postives = 127/149 (85.23%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPL 1571
            CVII+D ++I+ GRNRT ETRNATR+AEMEAID LLE WQR+GL++ EV   FS C LYVTCEPCIMCAAALS +GIK+VYYGCAN+KFGGCGSILSLH+   E  +S  V ++GFKCTGG++ASEAI+L RSFYEQGNPNAPKPHR L
Sbjct:   26 CVIIEDQKVISSGRNRTNETRNATRHAEMEAIDELLERWQRNGLTRTEVVSRFSNCTLYVTCEPCIMCAAALSIMGIKEVYYGCANDKFGGCGSILSLHTEGPEKLVSAAV-RKGFKCTGGILASEAINLLRSFYEQGNPNAPKPHRAL 173
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067LPW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07982 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.160e-57
Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574
            CVI++ G +I  GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS   +P  S++  Q +GFKCTGG+MASEA+SL R FYEQGNPNAPKPHRP+ 
Sbjct:   88 CVIVEGGIVIGSGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLNSEEAAQWKGFKCTGGVMASEAVSLLRCFYEQGNPNAPKPHRPVT 238
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0B2QCW1_GLYSO (tRNA-specific adenosine deaminase 2 OS=Glycine soja GN=glysoja_005829 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.705e-57
Identity = 107/152 (70.39%), Postives = 131/152 (86.18%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTT+TRNATR+AEMEA+D LL  WQ+ GLS +EVA+ FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH S + P  ++  P + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHRPL ++
Sbjct:   30 CVIVEDGKVIASGRNRTTQTRNATRHAEMEAVDVLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHLSNTTPLNNEVSPGKCFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRPLARQ 181
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: D7KC23_ARALL (EMB2191 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_314252 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.940e-57
Identity = 109/155 (70.32%), Postives = 132/155 (85.16%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLH--SSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583
            CV+++DG++IA GRNRT ETRNATR+AEMEAID L+  WQ DGLS ++VA+ FS+CILYVTCEPCIMCA+ALSFLGIK+VYYGC N+KFGGCGSILSLH  SS S   I +    +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ++
Sbjct:   36 CVLLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSSQSSDIIEESQRGKGYKCRGGIMAEEAVSLFKCFYEQGNPNAPKPHRPVVQRE 190
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: V7CBJ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G141300g PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 4.179e-57
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LL  WQ++GLS AEVA+ F  C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLHSS + P  ++    + FKCTGG+MASEA+ LFR+FYEQGNPNAPKPHR L ++
Sbjct:   30 CVIVEDGKVIATGRNRTTETRNATRHAEMEAIDVLLGQWQKNGLSMAEVAEKFLNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSLHSSNTTPVNNEVSSGKSFKCTGGIMASEAVLLFRTFYEQGNPNAPKPHRSLARQ 181
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067JUZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00132 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.559e-57
Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLV 1574
            CVI++ G +IA GRNRTTETRNATR+AEMEAID LLE WQ+ GLS +EVA+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCAN+KFGGCGSILSLHS   +P I ++  Q +GFKCT G+MASEA+SL R FY+QGNPNAPKPHRP+ 
Sbjct:   88 CVIVEGGIVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKSGLSTSEVAEKFSKCTLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSLHSGNYQPLIREEAAQWKGFKCTRGVMASEAVSLLRCFYKQGNPNAPKPHRPVT 238
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A078I0C2_BRANA (BnaC06g01770D protein OS=Brassica napus GN=BnaC06g01770D PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 7.990e-57
Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI +DG++IA GRNRT ETRNATR+AEMEAID L+  W++DGLS ++VA+ FS+C+LYVTCEPCIMCA+ALSFLGIK+VYYGCAN+KFGGCGS+LSLH   S+  IS+K  + +G+KC GG+MA EA+SLF+ FYEQGNPNAPKPHRP+VQ+
Sbjct:   37 CVITEDGKVIASGRNRTNETRNATRHAEMEAIDELVGPWRKDGLSPSQVAERFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCANDKFGGCGSVLSLHLVSSD--ISEKTQRGKGYKCRGGIMADEAVSLFKCFYEQGNPNAPKPHRPVVQR 187
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A2Q4B8_MEDTR (CMP/dCMP deaminase, zinc-binding OS=Medicago truncatula GN=MTR_7g086830 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.434e-56
Identity = 110/153 (71.90%), Postives = 128/153 (83.66%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKV-PQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE WQ++GLS  EVAK FS C LYVTCEPCIMCA+ALS LGIK+V+YGC+N+KFGGCGSILSLH       +SD V P +GFKC GG+MA EA+ L R+FYEQGNPNAPKPHRPL  +
Sbjct:   30 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGSILSLH-------LSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQGNPNAPKPHRPLAHQ 175
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: M5XQM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020315mg PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.652e-56
Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 3 
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LLE W+   LS++EVAK FS+C LYVTCEPCIMCAAALSF+GIK+V+YGC N+KFGGCGSILSLHSS SEP IS   P+  GFKC GG+MASEA+SLFRSFYEQGNPNAPKPHRPL Q+  +
Sbjct:   36 CVIVEDGKVIASGRNRTTETRNATRHAEMEAIDTLLEQWREKRLSQSEVAKIFSKCKLYVTCEPCIMCAAALSFIGIKEVFYGCGNDKFGGCGSILSLHSSSSEPLISGGAPRGEGFKCNGGIMASEAVSLFRSFYEQGNPNAPKPHRPLAQQATQ 191
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 13
Match NameE-valueIdentityDescription
ADAT2_BOVIN2.467e-2847.95tRNA-specific adenosine deaminase 2 OS=Bos taurus ... [more]
ADAT2_DANRE2.797e-2747.68tRNA-specific adenosine deaminase 2 OS=Danio rerio... [more]
ADAT2_HUMAN3.049e-2746.58tRNA-specific adenosine deaminase 2 OS=Homo sapien... [more]
ADAT2_MOUSE8.353e-2745.33tRNA-specific adenosine deaminase 2 OS=Mus musculu... [more]
ADAT2_XENTR2.409e-2545.16tRNA-specific adenosine deaminase 2 OS=Xenopus tro... [more]
ADAT2_XENLA2.485e-2545.89tRNA-specific adenosine deaminase 2 OS=Xenopus lae... [more]
TAD2_SCHPO3.473e-2041.50tRNA-specific adenosine deaminase subunit tad2 OS=... [more]
TAD2_YEAST6.845e-1839.29tRNA-specific adenosine deaminase subunit TAD2 OS=... [more]
TADA_STRP11.689e-1031.88tRNA-specific adenosine deaminase OS=Streptococcus... [more]
TADA_STRPQ1.735e-1031.88tRNA-specific adenosine deaminase OS=Streptococcus... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9SZ91_RICCO1.064e-5875.33tRNA-specific adenosine deaminase subunit TAD2, pu... [more]
S8E893_9LAMI7.100e-5873.15Uncharacterized protein (Fragment) OS=Genlisea aur... [more]
A0A067LPW9_JATCU1.160e-5774.17Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A0B2QCW1_GLYSO1.705e-5770.39tRNA-specific adenosine deaminase 2 OS=Glycine soj... [more]
D7KC23_ARALL1.940e-5770.32EMB2191 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
V7CBJ0_PHAVU4.179e-5771.05Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A067JUZ1_JATCU4.559e-5773.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A078I0C2_BRANA7.990e-5770.59BnaC06g01770D protein OS=Brassica napus GN=BnaC06g... [more]
A2Q4B8_MEDTR1.434e-5671.90CMP/dCMP deaminase, zinc-binding OS=Medicago trunc... [more]
M5XQM0_PRUPE3.652e-5675.64Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 2..126
e-value: 6.0E-35
score: 119.8
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASEcoord: 2..133
NoneNo IPR availablePANTHERPTHR11079:SF92TRNA-SPECIFIC ADENOSINE DEAMINASE 2coord: 2..133
IPR002125Cytidine and deoxycytidylate deaminases, zinc-bindingPFAMPF00383dCMP_cyt_deam_1coord: 2..72
e-value: 1.7E-10
score: 40.5
IPR002125Cytidine and deoxycytidylate deaminases, zinc-bindingPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 1..92
score: 17.273
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 2..130

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0096985 ID=g.barbadense_cottongen_reftransV1_0096985; Name=g.barbadense_cottongen_reftransV1_0096985; organism=Gossypium barbadense; type=contig; length=2125bp
ATGGAAAGTGATAATCTTGCATACATGGAACTTGCAATTCACCAGGCAAA
ACTTGCTTCGGAAAGCCTTGAAGTGCCTGTTGGGTAATTATTAACCTCAT
AAATTTCGTTTCTCCCTTAACCAACCTTCTCCATTTATTGGATGAAAATA
TGAATTTAGCTTCTCTTTTGTTACTAATGTAGATTGGCATTGCTTTGCAC
GACCTGGGAAAAAAAACTAAAAATGTTATATGAAGTACAACACGACACAA
ATACATAAAGATTCCAAAATCTATATAACAGAAATTATGAACTTATTAGG
TTGGTTATAACCTATATAATTAACATTATTAGGATTTAGAAACACTTGAA
AAAGTTTTGAGTTGAGGAATTGTACTGAATTTGGTGTTATGATTAATATG
TTTGGATGAAATCTGCTTGCAATGGTAGACATAAAGAAATATACTAAGGT
GAACAAAGAGCTGAAATACCCTAAAAGGTTTATGAGGACCTATTTATAGT
ACATTCCATAGGATTAAAAATGGAAATCTGTAATAACTTAAACAGATTCT
AAACAATGTAATTATTGCCTTCAAGGTTCACCTAATTTGAACATTTAAAT
TAAAAAGAAAAGAAGTAATGGCTTTTCCGACGGGTGCATTAGTTCTACCT
AGAAGATTGCAAAATTTAATGACACAAAGATTTGACCAATAAAAAGAACA
AGATATAAACTTAAGACTAAAATAAAATAGCATTGTCAAGCACATAATTA
TTTTTTTGGTCTCATGATTAATCTATAAATCAAAATATCACTAAGTTCTT
GGTCTTCATTGGTTGCACCATGTCATTGACTCGTGGGTTAAGTTTTATAT
TGTTGTGTGTTAAAGCATAAGCGATTGTTAACATTCTTGTAATTGATTAC
CAAGTTTTGAATCATGTAGCAATTCCTCTATTGCTACAACCAGAATTTTA
CGTTGCTGTAAACTTCATCAGATATCTGTTAACATAAATAGTTCCTCATT
ATCTTTGTCTGTGCTTTAACTTGGAGACTAAATTGTCTTCTTTTGCTCAA
GTCGATGACACATAGTCCAAGAGCAAAATTTCAATGCAATTTTTTTCTTT
TCACCATACCTTTTATCTACCAGTTGCGTAATCATCAAGGATGGGGAGCT
TATAGCCTTGGGTAGAAATCGAACCACTGAGACACGAAATGCAACAAGGT
ATGCAGAAATGGAAGCCATAGATAATCTTCTAGAGATGTGGCAGAGAGAT
GGACTTTCAAAAGCAGAAGTGGCTAAAAACTTTTCACAATGTATTTTGTA
TGTTACATGTGAACCATGCATAATGTGTGCTGCAGCTTTGTCATTTCTTG
GCATAAAAGATGTATATTATGGTTGTGCAAATGAGAAATTTGGAGGGTGC
GGATCAATTTTATCCTTGCATTCAAGTTGCTCAGAGCCTTTCATCAGTGA
TAAAGTTCCACAAAGAGGTTTCAAATGTACAGGGGGATTAATGGCCTCAG
AAGCAATCTCTCTTTTCCGAAGTTTCTATGAACAGGGGAATCCTAATGCT
CCAAAGCCTCATAGGCCTCTCGTTCAAAAGAAAGTTGAGTGATACATATA
GGTTGGTATATTCTTTTCTTAGTGATTTCAAAATACTTCTACTCTTGCCT
AGTTTCTTGAGTGATGTTCTTTGTTTCTAATTTCTTGTAAGGGTTTTGGT
GCTGTAAGGTGATTTAGGGCTGATCAAATGTTGGCGATAGAACTGCGAAG
AGAAAAGCAAATAGCAAGTCAAGGAAAAAGCTGGTTGGAGTTTGATAATG
GTAATGGCATTTTGTTCTAGTGTGCTGTTGCATGTCAGCGTCGGATTTGT
CAAAGCCACATTATAAGTCATATTTAACTGTGTTAGTGGTAGGTAGATCA
ACAGTTTGATGGTTTGATAGGATAGGTAGCTTGAGCATTCTTAAAGAACA
AGTATCATATTGATAATTTCGTTAATCTTCAGGGGCTACTTATAAAAATT
TTGTCAACTATTTTATAACAAATTTGGGCTTGAAGGGTTTCTATTAAGAT
TTTCTTCGGCGAGGTATTTTACTTGTGTATATGTACATATAATTCCAATG
TATCCTATTTCTAAGGCTTTGGTGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003824catalytic activity