g.barbadense_cottongen_reftransV1_0096984, g.barbadense_cottongen_reftransV1_0096984 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: K7MAD8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 5.415e-90 Identity = 201/579 (34.72%), Postives = 302/579 (52.16%), Query Frame = -2 Query: 533 KEIIISKPDMNRFDEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHY-RRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPS------DSRNKEGTN---ELTKNRQDRD------------------LEQGEQNR------------GLNQQDY------CKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEEDDTILMERQXX----XXETSKSNATANTERSPEPD-TPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNGHSPR 2116 K++ +++ + ++M +PY +LAK + ++K+ D L I T H AAH G + R ++E V VL++++ GNT LHEVA T V+ + ++E N+Q E +L +NKLGET ++RAA ++ + +G + + H+ R+ D SILH AVI Q F TA+W L + LA K+ N T+L LLA M S FKS + G K FIY LP+ ++NKE T +L R+D++ L+ G + R + Y K WK I ++W++K+MH A +L LL + D SW T D T+ M R ++ +E K E + +P TPLL+A GI EIV+ I+ +P ++ H+ QNIL++A+ HRQ K++ +LK + + L ID + T+LH+ A + GG++P AL+LQ+EL WF+ ++ ++P H+ +H N+ TA LF + H LL A+EW K T+QSCS VA+LVATVVF AAYT PGG NG PR Sbjct: 9 KKLEMTRHSVALIEKMKKPY--ILAKRYEWEEFGRFFNKHKDLLDKQIDLHHSTPLHYAAHCGNPTMYREMIEWVGEGDIKRVLRLQDDMGNTPLHEVAFTGEVEMTKSILEH--EEEEGPNQQYEPLLRMRNKLGETAVYRAAALGKTDLLSFFLQDLGADAHRDIHFHRKGDKMSILHTAVIDQFFGTALWILERYEHLAYEKEDNELTTLQLLAKMPSTFKSQTQM-GPLKNFIYLLLPNFQDYKYYNQNKEYTTKKEDLESGREDKNEPSPTQMKLEDNTREGQILKSGGKARRNEPPTTQRKLSAFSWMWYTMWKIMAKEWKEIDKLWRKKEMHNLAKELVNLLAQKDYSWRNT-AIARDRTVSMGRSQQEGKPKEIKGKQEEGEKQEGASKPTYTPLLMAACNGITEIVEVIIHFHPHSIEHVSDDEQNILYMAVKHRQKKIYQILKKLKMVRSLAGKIDKESNTVLHYTAE---FQGGSQPGFALQLQEELHWFDRIEKRLPYHYTIHKNQYNKTAKQLFVEKHEALLNDAREWIKETAQSCSAVAVLVATVVFAAAYTVPGGTDDNGF-PR 577 HSP 2 Score: 99.7525 bits (247), Expect = 5.415e-90 Identity = 67/125 (53.60%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 166 LEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEK-KWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNLP 537 L E ++ FT+MD+ L SSL SV++FLSILTS E DF LPR L+ GF LFFS+ +TM++F+ATIL+ + LEK KWT++LTYAAAF P+C+FAL QFPLY V+S+L L++ +P Sbjct: 579 LHETIFMVFTIMDIVALVSSLGSVIMFLSILTSPCEMWDFRKSLPRKLNTGFALLFFSMATTMLSFSATILINIKLEKNKWTSSLTYAAAFFPVCIFALVQFPLYVA-MKGCVRSMLRNLKKIIP 702
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: V7BSG2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G171500g PE=4 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 6.890e-90 Identity = 194/557 (34.83%), Postives = 287/557 (51.53%), Query Frame = -2 Query: 560 DEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHYRRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPS--DSRNKEGTNELTKNRQDRDLEQGEQN-----------------------------------RGLNQQD--------------YCKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEEDDTILMERQXXXXETSKSNATANTERSPEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGG 2077 + M PY ++AK D + + ++ + L I T FH AAH G E+ + ++E V VL++++ GNT LHEVA T V+ + ++E G+D Q + ++ +N LGETP++RAA ++ + N+ H R+ D SILH AVI Q F TA+W L+ LA K++N T+L LLA M S FKS +P G FK F+Y LP+ D + + N T ++ DLE+G N R L+ K WK I ++W++K+MH A +L LLV+ D SW T D T+ M R + E + + P TPLL+A GI EIV+ I+ +P ++ H+ + QNIL++A+ HRQ +++ +LK + + L ID D T+LHH A + GG++P A++LQ+EL WF+ ++ ++P H+ +H N+ TA LF + H LLK A+EW K T+QSCS VA+LVATVVF AAYT PGG Sbjct: 22 ERMKRPY--IMAKRYDWEGFRKFFCEHKNLLDKQIDLHHSTPFHYAAHCGNPEMYKEMIEWVGEGDIKRVLRLQDDMGNTPLHEVAFTGEVEMTKSILEHEEE-AGSD--QYQALIEMRNNLGETPVYRAAALGKTDLLIFFLEDCQVDPNIHFH-RQEDKMSILHTAVIDQFFGTALWILKNYDYLANEKEQNDLTTLQLLAKMPSTFKSQTPM-GPFKSFLYILLPNFQDYKYYDQNNGCTT--KEEDLERGRNNRNEPSSTETHLEDNMREGQKLEKHKKGKKESPRTQRNLSAWSTTVFSWLWYSMWKVLAKEWKEIDKLWRKKEMHNLAKELVHLLVQKDFSWRNT-AIARDKTVSMGRSQREGKPKEEKKEQEGASKPTTYTPLLMAACNGITEIVELIIHFHPHSIEHVSEDEQNILYMAVKHRQKEIYRILKKLKMVRSLAGKIDKDNNTVLHHTAE---FQGGSQPGYAMQLQEELHWFDRIEKRVPYHYTIHKNQHNQTAKQLFVEKHASLLKDAREWIKETAQSCSAVAVLVATVVFAAAYTVPGG 565 HSP 2 Score: 93.2041 bits (230), Expect = 6.890e-90 Identity = 64/124 (51.61%), Postives = 83/124 (66.94%), Query Frame = -3 Query: 169 LEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLE-KKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNL 537 L ++ FT+MD+ L SL SV++FLSILTS E DF LPR L GF LFFS+ +TM+ F+ATIL+ + LE KWT++LTY AAF P+C+FAL QFPL+ A+K + LRRNL Sbjct: 575 LHHAIFFVFTIMDIVALIGSLASVIMFLSILTSPCEMWDFRKSLPRKLMAGFALLFFSMATTMLAFSATILINIKLEGNKWTSSLTYCAAFFPVCIFALVQFPLF-----MAIKGCVRSLRRNL 693
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: G7ILT7_MEDTR (Ankyrin repeat protein OS=Medicago truncatula GN=MTR_2g017930 PE=4 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 3.074e-89 Identity = 202/540 (37.41%), Postives = 291/540 (53.89%), Query Frame = -2 Query: 560 MSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREE----ILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHYRRN-DGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDSRNKEGTNELTKNRQDRDLEQGEQNRGLNQQ----------------------------DYCKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEEDDTILM---ERQXXXXETSKSNATANTERSPEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGG 2071 M EPY +LAK + + K+ D L I + T FH AAH G E+ +L V PS VL++++ GNT LHEVA T V+ + +L + E+ +L +NKLGETP++RAA ++V+ +G +L H+ R D SILH AVI Q F TA+W L++ ELA K++N T+L LL M SAFKS + G FK FIY LP ++ R+ +DLE GE +G+ +Q K WK I ++W++K+MH A +L LL + D SW + D T+ M EE++ K +T TPLL+A +GI+EIV+ I+ +PQ++ H+ + QNIL++ + HRQ ++F +LK + RL ID + T+LH A+ K GG++P AL+LQ+EL WFE ++ ++P H+++H N TA +LF++ H LLK A+EW K T+QSCS VA+LVATVVF AAYT PGG Sbjct: 1 MKEPY--ILAKRYNWKGFLEFFLKHKDLLDKQIDLHQSTPFHYAAHCGSPEMYNKMLLKVDPSNMQHVLRMQDDMGNTPLHEVAFTGEVEMTKS------ILKKEEETMSEQFPRPLLQLRNKLGETPVYRAAALGKTSLVKCFVEELG--VDLRDHFHRTGDKMSILHTAVIDQFFGTALWLLKRYNELADLKEQNDLTTLQLLTKMPSAFKSQTQM-GAFKNFIYPLLPDYQDYAYYLHDKDDTRKRQDLEIGE--KGMKEQYQTQWKQPPQIHHTKLSGFSWMWYTMWKALSKEWKGIEKLWRKKEMHNLAQELVHLLAKNDNSW-QHSSVHWDKTVSMGMPHHIIEEKQKEKQEKQDDTGIKAIIYTPLLMAACSGIIEIVEVIIHFHPQSIEHVSKDEQNILYMVVKHRQLEIFQMLKKLKMVGRLAGKIDKESNTVLHSTADFK---GGSQPGYALQLQEELHWFERIEKRLPYHYVIHKNNNNQTARELFEEKHEQLLKDAREWIKETAQSCSAVAVLVATVVFAAAYTVPGG 523 HSP 2 Score: 96.6709 bits (239), Expect = 3.074e-89 Identity = 68/123 (55.28%), Postives = 86/123 (69.92%), Query Frame = -3 Query: 175 LLEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEK-KWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRR 540 LL P++ FTVMDV LASSL SVV+FLSILTS E DF LPR L GF FLFFS+ +T++ F+ATIL+ + L+K KWT++LTY AAF P+ +FA+ QFPLY VA ++ LRR Sbjct: 532 LLHHPIFVVFTVMDVVALASSLASVVMFLSILTSPCELWDFRRSLPRKLMAGFAFLFFSMATTVLVFSATILVNIKLDKNKWTSSLTYTAAFFPVSIFAMMQFPLY----VAMKGCVVSLLRR 650
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: U5FPZ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05710g PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 3.621e-87 Identity = 188/514 (36.58%), Postives = 270/514 (52.53%), Query Frame = -2 Query: 560 DEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEM---VPPSKSAE-VLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGN---LESHYRRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDSRNKEGTNELTKNRQDRDLEQGEQNRGLNQQDYCKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEEDDTILMERQXXXXETSKSNATANTERSPEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLK-DKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGG 2077 EM Y L ++D L Y K+ D LL P++ +DT FH+A + E++L+ LL+ VP S+ + + + N+YG+T LH A+ N +A GETPLFRAA + +V+YLA N L H +RNDG SILH+AV+G+ F+TA+ L+ L+ D G T L LL + SAFKS + IF +F+Y L E G + KGW M+ +IW+ K+ H+SA++LAK+L+++D SW D I ++ Q S P PLL ATKTGI+E P + + ++G+NILHVAI +R+ +FH++K ++ + R+ GID DG T+LH A+ KYY G+K PAL+L +EL WF V+ +PS++ + K+ TA++LF D H++ L AQ+WAK TSQSCS VA+LVAT+VF AAYT PGG Sbjct: 5 SEMKPAYIATL--EEDWKSLAEFYEKHKDRLLTPMSFTEDTAFHMAVYSKDEKLLKCLLDYAQDVPTSQDHKHPISITNVYGHTPLHLAASRGNSEAQ----------------------------GETPLFRAAAFGQTEIVKYLARQPAHIVNDELLLVHRQRNDGQSILHVAVLGENFETAVLLLKLDKSLSKLTDCGGKTCLGLLTEIPSAFKSGH-SMSIFSQFLYMLL-------------------------EWINGSICRFAFKGWPMVERIWENKRKHKSALRLAKMLIKSDVSW--------DQDIAVQGQYGASTGSPFFG---------PSHPLLTATKTGILE---------PHFLDLLDEEGKNILHVAIKYRRKDIFHLIKSNRIISNRMSYGIDKDGYTLLHQVADNKYYSVGSKHGPALQLHEELKWFTRVEKLIPSYYAKLRDSKQKTAEELFNDMHKEQLLAAQQWAKETSQSCSAVAVLVATIVFAAAYTVPGG 436 HSP 2 Score: 86.2705 bits (212), Expect = 3.621e-87 Identity = 65/127 (51.18%), Postives = 87/127 (68.50%), Query Frame = -3 Query: 166 ILLEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEKK-WTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNLP 543 I L + + FFT+MDV LASSLTSVV+FLSILTSS +++DF + +PR L+ GFT LFFSV +TM+ F ATILL+V K+ T L AA P+ +FA+ QF +Y F+ + K I +RR+LP Sbjct: 444 IFLHKNFFLFFTIMDVIALASSLTSVVMFLSILTSSFDYKDFRYSIPRKLTFGFTLLFFSVMATMLAFAATILLIVQSGKQLMTGGLISIAALFPVSVFAMMQF-RFYAAFMHSTKGIRKAMRRSLP 569
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: B9HZF4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01210g PE=4 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 1.874e-86 Identity = 209/564 (37.06%), Postives = 297/564 (52.66%), Query Frame = -2 Query: 545 MSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVP----PSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYL-----ATAIGRTGNLESHYRRN--DGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDSRNKEGTNELTKNRQDRDLEQGEQNRGLNQQD---------------YCKGWK--MIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEED--DTILMERQXXXXETSKSNATANTERSPEP------------------------DTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLK-DKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNG 2071 + EPY+ + D + Y K+++ LL+P+TA K+T HIA +E+ L+ LLE++ P E LK N + NT+LHE N KA +LL+E E+L NK GETPLF AA ++ +V++L + G L +R+ D SIL A+IGQ F+TA+ L LA+ KDKN ++L LLA M AF+S P G+F IYYCLP K + E + +R + + E G N D Y K K + IW QKK A++ AK LVE D S+ E D T+L+ Q + +K ++ + E + PL AT+ GI +IV+ I+ +P A+ + ++GQ+IL +A+M+RQ K+F LK K R+ R +D+ G T+LHH A+ ++Y GGTKP PAL+LQ+EL WFE V+ +PS++++ LNK TA + F++ H++ LK AQ W K TSQSCSTVA LVATVVF AAYT PGG +NG Sbjct: 7 LKEPYRAAMKGKWDR--MINYYKKHSEYLLSPLTASKETALHIAVCSKQEQPLKDLLEIMKENELPLPETEFLKKTNKFDNTVLHEATIYGNNKAVKLLVERC-----------PELLSVPNKFGETPLFTAAGFAETEIVKFLIRSKRGQCVDDDGLLLPIHRQRTVDNLSILSAAIIGQNFETALLLLELDKSLASLKDKNQISTLQLLAEMPGAFESEFPM-GVFGRLIYYCLPVPRHRKVKSKEKSGSRSGKGVGDLESGLGRNSGDLGSVSKRNQRGGILKYLKVPKGCWLEGIWNQKKKRVFALRFAKSLVEKDDSYELEGEEGRDGKQTVLLPSQIITGDQNKEEEGQTSKITSEAKEIEKDQCPTAHTSLIKSSLTIKVENPLFTATRRGIEKIVEMIINVHPHAIEKLNKEGQSILDMAVMYRQKKIFDFLKHQKIPLARMRRVVDSKGNTLLHHVADMEHYRGGTKPGPALQLQEELQWFEQVQKLIPSNYVLLLNKDGMTARECFENTHKESLKEAQRWIKETSQSCSTVAALVATVVFAAAYTVPGGSDENG 556 HSP 2 Score: 57.7658 bits (138), Expect = 1.874e-86 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 187 LEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEKKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILD 537 + P + FTV DV LASSLTS+V+FLS TS ++FH LPR L +GFTFLFF+V +TM++F ATIL+L+ E+K T L A+FLP+ +F + QF LY F+ + +IL+ Sbjct: 561 INSPYFLVFTVSDVLSLASSLTSLVVFLSFSTSPFRLQEFHMSLPRKLLVGFTFLFFAVITTMLSFGATILILIQSERKLTTLLLSIASFLPVLVFGIMQFRLYVS-FMGSTLNILN 676
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: V7AL70_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G033000g PE=4 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 5.035e-86 Identity = 191/538 (35.50%), Postives = 276/538 (51.30%), Query Frame = -2 Query: 545 DEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSA-EVLKVKNIYGNTILHEVATTTNVKA---ARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHYRRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDSRNKEGTNELTKNRQDRDLEQGEQN-------RGLNQQDYCKGWKMIV-------QIWKQKKMHESAVKLAKLLVETDASWFETHEPEEDDTILM---------ERQXXXXETSKSNATANTERSPEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNG 2077 +EM E K + K K I + + +L +T H+A ++L LLEMVP + L KN+ GNT+LHE+ + K E+ L+ P Q++ +L N GETPLF AA + +++Y+A R NL H+RR+D + LH +VIGQ F AIW R +LA KD+ T L LL+ M F+S + G K IY+ LP N E + +Q +D E G+++ +++ +Y + WK + Q+WK+KK H+ A LA +LV D SW + + E + TIL+ ++ + NTE PE T L +ATKTGIVEIV + L +P A+YH+ + QNIL +A+ +RQ K+ +++ + LV I + G T+LH A YY A LQ EL W++ V+ P H+ MH + T +D+ + H +LK AQ+W K T+QSCSTVAILVATVVF AAYT PGG +NG Sbjct: 23 EEMKEAQKAAMEKQ--WKEFKKIMMQKPENILKQFDLFGNTAIHVATR-SHPQLLSELLEMVPDEEERWNALCRKNVEGNTVLHEIVFSKKAKKMVDVVFRFEDQLLTP-----QKKPLLELTNNQGETPLFVAAMHGKLKILKYMA---NRVQNLGKHFRRSDKYNALHASVIGQHFHVAIWLERMDEKLALEKDEKDLTCLQLLSKMPQVFRSHTHM-GPLKNTIYHLLPDGYDNHEQSQLF---KQKKDEENGKEDDEPTICKSAISEINY-RFWKRMAKEFEGIDQMWKEKKKHKLAEHLASILVTYDLSW-QVSKNEYNRTILITMPRDPLNVAKRRRVNAQKREERRKNTEERPE-RTALFLATKTGIVEIVNKFLQVHPAAIYHVTENQQNILTMAVKYRQKKILKLIERTGTIESLVAQITDKGRTVLHEVARMDYYKAEHLAGVAFHLQDELRWYDSVRRFTPKHYNMHCDIDGHTPEDMLEIEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGG-TENG 541 HSP 2 Score: 91.6633 bits (226), Expect = 5.035e-86 Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = -3 Query: 226 TVILLEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLE-KKWTATLTYAAAFLPICLFALFQFPLY 549 T + L ++ FFT+MDV LA+SL SVV+FLSILTS E DFH LPR L+LGF LFFS+ +TM+ F+AT+LL + LE + WT+TL Y+AAF P+ +FA+ QFP+Y Sbjct: 542 TPVFLHSSVFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFFSLMTTMLAFSATMLLTIRLEWRNWTSTLIYSAAFFPVTIFAIIQFPVY 650
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: B9HZE9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s02040g PE=4 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 2.299e-85 Identity = 211/583 (36.19%), Postives = 298/583 (51.11%), Query Frame = -2 Query: 545 EMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVP----PSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATA-----IGRTGNLES-HYRRN-DGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPS------DSRNKEGTNELTKNRQD-RDLEQGEQNRGLNQQD---------------YCK----GWKMIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEED-------------------------DTILMERQXXXXETSKSNATAN-TERS---------PEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKE-EAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNG 2074 E+ PY A + + Y ++ + + P+T KDT H+A H +E+ L+ LLE++ P E L+ +N +GNT LHE N +A +LL+E E++ N+ GETPLF AA ++ +VE+L + + G+L S H +R+ D SIL A+IGQ F+TA+ L LA+ KDKN ++L LLA M +AF+S P GIF+ IY CLP S+ K + R++ DLE G RG N D Y K W + +IW K+ H A A L+E D S EED + ++ E ETS+ + AN TERS + + PL AT+ GI EIVK + +P A+ + ++IL VA+M+RQ K+F ++K+KE + R+ R +D G T+LHH A+ K G TKP PAL+LQ+EL WFE VK ++P H++ LNK TA + F+++H LK AQ+W K T+QSCSTVA LVATVVF AAYT PGG + G Sbjct: 117 ELEAPYGA--AMNGYWQSMIDFYREHFEKIGCPVTPSKDTGLHLAVHSKKEQPLKALLEIMKERELPVTEEEFLEKRNEFGNTALHEATIYGNYEAVKLLVERC-----------PELIRKANQFGETPLFTAAGFATTAIVEFLIGSKREQCVDNNGSLLSIHKKRSKDVLSILSAAIIGQNFETALLLLDLDKSLASMKDKNQISTLQLLAEMPNAFESGCPM-GIFEGLIYCCLPVPRPCEVKSKVKSTVESFRRARKEVGDLESG---RGRNSGDLGSVSKRNQRGGLLNYLKIPEGCW--LERIWNLKRKHVFAYTFAASLIEKDESLKSVTITEEDQNKEEEGEEEQEMCGKKIKKGEKTSEITSNAKETERAETSEITSNANGTERSVLSTLSSLTKKKEIPLFTATRRGIQEIVKLKIKLHPHAIDQRDEMNRSILDVAVMYRQKKIFDIVKEKEIQMARMRRVVDKSGNTLLHHVADMKKNSGVTKPGPALQLQEELKWFERVKEEIPPHYVPLLNKDGMTARECFENSHEMQLKQAQKWIKETAQSCSTVAALVATVVFAAAYTVPGGSDEKG 680 HSP 2 Score: 79.337 bits (194), Expect = 2.299e-85 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = -3 Query: 148 PLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEKKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNLPGNWDFL 528 P + FTV DV LASSLTS+V+FLS+LTS E ++FH LPR L +GF+FLFFSV +TM++F ATIL+L+ E+K T L A+FLP+ +F + QF LY V+ + S + L +NL FL Sbjct: 688 PYFLIFTVSDVVSLASSLTSLVVFLSLLTSPFELQEFHISLPRKLVVGFSFLFFSVLTTMLSFGATILILIQTERKLTTLLLSIASFLPVLIFGILQFRLY----VSFMGSTFNILNKNLKAYPSFL 810
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: V7AHT9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G029900g PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.833e-85 Identity = 192/547 (35.10%), Postives = 294/547 (53.75%), Query Frame = -2 Query: 536 DMNRFDEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLME---ELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHYRRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDS--RNKEGTNELTKNRQDR-DLEQGEQNRGLNQQDYCKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFET-HEPEEDDTIL------------------MERQXXXXETSKSNATANTERS---PEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNGHSP 2092 +++ FDE + ++ A+ + K I + +L+ +T HIA +LR LLEM+ + L+ N NT+LHE+ T V+ A +++E E + ++R ++ N GETPLFRAA+ M++Y+A G++ + R D SILH +++GQ FD +IW L +LA +KD NG T L LL++M F+S +P+ G K IYY LP + + +G N R R D+E G+Q++ G I +IWK KK H+ A L+++LV+ D SW + HE + +L M + E S+S T S + TPLL+A +GIVEIV +I+ ++P+A+ H+ Q N+LH+A+ HRQ K+F++LK K L I +G T+LH + ++Y P A +LQ EL W+E VK +P++++MH +K TA+D+ + HR++ K A+ W K T+QSCSTV++LVATVVF AAYT PGG QN +P Sbjct: 5 EVSMFDETTVRAQRA-ARGGNWRMFKKILEGDKKSLVGAFDLFGNTAIHIATRSNNPGLLRELLEMLSEEERWHALRKGNCVNNTLLHEIVFCTRVEMAGVVLEFENEAAPEEVAEEKKRVPLVEIVNDSGETPLFRAAKLGRLKMLKYMAKHAH--GDIRRLFVRYDKHSILHASILGQFFDVSIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQTPSMGTLKTLIYYLLPEEGYGSHDDGENASADFRHQRSDIESGQQDKAKFPSSEFDG---IGRIWKLKKQHKLAEHLSEMLVQRDFSWQNSFHENFQPLIVLPVLSSKSDRIKHIHHMKEMHKTNSEMSRSRSYRAITTSTSIPHSKNYTPLLMAAGSGIVEIVGKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNLLKKHSAFKSLTFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKEIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVSVLVATVVFAAAYTIPGGTNQNNGTP 545 HSP 2 Score: 73.559 bits (179), Expect = 2.833e-85 Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = -3 Query: 166 TVILLEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLE--KKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNLP 549 T + L ++ FFTV DV L SSL SVV+FLSILTS E DF LP+ LSLGF LFFS+ TM+TF+AT+LL + LE +KW + L F P+ +F QFPL Y+ K +L LR +P Sbjct: 544 TPVFLGSRVFLFFTVTDVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFASLFFSLVCTMLTFSATVLLTIQLENHQKWASVLFCCGVFFPVAIFWRMQFPL-YKMLQRLAKRLLKTLREAVP 672
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: V7AEG1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G029900g PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.675e-84 Identity = 193/559 (34.53%), Postives = 298/559 (53.31%), Query Frame = -2 Query: 536 DMNRFDEMSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVPPSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLME---ELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYLATAIGRTGNLESHYRRNDGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYCLPSDS--RNKEGTNELTKNRQDR-DLEQGEQNRG---------LNQQDY---CKGWKMIVQIWKQKKMHESAVKLAKLLVETDASWFET-HEPEEDDTIL------------------MERQXXXXETSKSNATANTERS---PEPDTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLKDKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNGHSP 2092 +++ FDE + ++ A+ + K I + +L+ +T HIA +LR LLEM+ + L+ N NT+LHE+ T V+ A +++E E + ++R ++ N GETPLFRAA+ M++Y+A G++ + R D SILH +++GQ FD +IW L +LA +KD NG T L LL++M F+S +P+ G K IYY LP + + +G N R R D+E G+Q++ +N + K + I +IWK KK H+ A L+++LV+ D SW + HE + +L M + E S+S T S + TPLL+A +GIVEIV +I+ ++P+A+ H+ Q N+LH+A+ HRQ K+F++LK K L I +G T+LH + ++Y P A +LQ EL W+E VK +P++++MH +K TA+D+ + HR++ K A+ W K T+QSCSTV++LVATVVF AAYT PGG QN +P Sbjct: 5 EVSMFDETTVRAQRA-ARGGNWRMFKKILEGDKKSLVGAFDLFGNTAIHIATRSNNPGLLRELLEMLSEEERWHALRKGNCVNNTLLHEIVFCTRVEMAGVVLEFENEAAPEEVAEEKKRVPLVEIVNDSGETPLFRAAKLGRLKMLKYMAKHAH--GDIRRLFVRYDKHSILHASILGQFFDVSIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQTPSMGTLKTLIYYLLPEEGYGSHDDGENASADFRHQRSDIESGQQDKAKFPSSVLSRINHAIWRTLAKEFDGIGRIWKLKKQHKLAEHLSEMLVQRDFSWQNSFHENFQPLIVLPVLSSKSDRIKHIHHMKEMHKTNSEMSRSRSYRAITTSTSIPHSKNYTPLLMAAGSGIVEIVGKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNLLKKHSAFKSLTFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKEIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVSVLVATVVFAAAYTIPGGTNQNNGTP 560 HSP 2 Score: 73.559 bits (179), Expect = 1.675e-84 Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = -3 Query: 166 TVILLEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLE--KKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILDFLRRNLP 549 T + L ++ FFTV DV L SSL SVV+FLSILTS E DF LP+ LSLGF LFFS+ TM+TF+AT+LL + LE +KW + L F P+ +F QFPL Y+ K +L LR +P Sbjct: 559 TPVFLGSRVFLFFTVTDVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFASLFFSLVCTMLTFSATVLLTIQLENHQKWASVLFCCGVFFPVAIFWRMQFPL-YKMLQRLAKRLLKTLREAVP 687
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Match: U5FYD1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01210g PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.250e-83 Identity = 208/566 (36.75%), Postives = 296/566 (52.30%), Query Frame = -2 Query: 545 MSEPYKKVLAKDDDVHCLKAIYSKNTDALLNPITALKDTIFHIAAHDGREEVLRVLLEMVP----PSKSAEVLKVKNIYGNTILHEVATTTNVKAARLLMEELLVLPGNDNRQREEILGAQNKLGETPLFRAAQYSCKTMVEYL-----ATAIGRTGNLESHYRRN--DGTSILHIAVIGQQFDTAIWFLRKSPELATYKDKNGNTSLHLLASMASAFKSSSPTKGIFKEFIYYC--LPSDSRNKEGTNELTKNRQDRDLEQGEQNRGLNQQD---------------YCKGWK--MIVQIWKQKKMHESAVKLAKLLVETDASWFETHEPEED--DTILMERQXXXXETSKSNATANTERSPEP------------------------DTPLLIATKTGIVEIVKEILTRYPQAVYHIGQKGQNILHVAIMHRQYKVFHVLK-DKEEAKRLVRGIDNDGCTILHHAANTKYYHGGTKPTPALKLQQELTWFEDVKNQMPSHFIMHLNKKETTADDLFKDNHRDLLKTAQEWAKNTSQSCSTVAILXXXXXXXXXXXAPGGFLQNG 2071 + EPY+ + D + Y K+++ LL+P+TA K+T HIA +E+ L+ LLE++ P E LK N + NT+LHE N KA +LL+E E+L NK GETPLF AA ++ +V++L + G L +R+ D SIL A+IGQ F+TA+ L LA+ KDKN ++L LLA M AF+S P G+F IYY LP K + E + +R + + E G N D Y K K + IW QKK A++ AK LVE D S+ E D T+L+ Q + +K ++ + E + PL AT+ GI +IV+ I+ +P A+ + ++GQ+IL +A+M+RQ K+F LK K R+ R +D+ G T+LHH A+ ++Y GGTKP PAL+LQ+EL WFE V+ +PS++++ LNK TA + F++ H++ LK AQ W K TSQSCSTVA LVATVVF AAYT PGG +NG Sbjct: 7 LKEPYRAAMKGKWDR--MINYYKKHSEYLLSPLTASKETALHIAVCSKQEQPLKDLLEIMKENELPLPETEFLKKTNKFDNTVLHEATIYGNNKAVKLLVERC-----------PELLSVPNKFGETPLFTAAGFAETEIVKFLIRSKRGQCVDDDGLLLPIHRQRTVDNLSILSAAIIGQNFETALLLLELDKSLASLKDKNQISTLQLLAEMPGAFESEFPM-GVFGRLIYYFAGLPVPRHRKVKSKEKSGSRSGKGVGDLESGLGRNSGDLGSVSKRNQRGGILKYLKVPKGCWLEGIWNQKKKRVFALRFAKSLVEKDDSYELEGEEGRDGKQTVLLPSQIITGDQNKEEEGQTSKITSEAKEIEKDQCPTAHTSLIKSSLTIKVENPLFTATRRGIEKIVEMIINVHPHAIEKLNKEGQSILDMAVMYRQKKIFDFLKHQKIPLARMRRVVDSKGNTLLHHVADMEHYRGGTKPGPALQLQEELQWFEQVQKLIPSNYVLLLNKDGMTARECFENTHKESLKEAQRWIKETSQSCSTVAALVATVVFAAAYTVPGGSDENG 558 HSP 2 Score: 57.7658 bits (138), Expect = 1.250e-83 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = -3 Query: 187 LEEPLYSFFTVMDVAGLASSLTSVVIFLSILTSSLEFEDFHHRLPRNXXXXXXXXXXXXXXXXXXXTATILLLVHLEKKWTATLTYAAAFLPICLFALFQFPLYYQYFVAAVKSILD 537 + P + FTV DV LASSLTS+V+FLS TS ++FH LPR L +GFTFLFF+V +TM++F ATIL+L+ E+K T L A+FLP+ +F + QF LY F+ + +IL+ Sbjct: 563 INSPYFLVFTVSDVLSLASSLTSLVVFLSFSTSPFRLQEFHMSLPRKLLVGFTFLFFAVITTMLSFGATILILIQSERKLTTLLLSIASFLPVLVFGIMQFRLYVS-FMGSTLNILN 678 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0096984 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0096984 ID=g.barbadense_cottongen_reftransV1_0096984; Name=g.barbadense_cottongen_reftransV1_0096984; organism=Gossypium barbadense; type=contig; length=2162bpback to top |