g.barbadense_cottongen_reftransV1_0096981, g.barbadense_cottongen_reftransV1_0096981 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0096981
Unique Name	g.barbadense_cottongen_reftransV1_0096981
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2279

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.954e-116
Identity = 178/323 (55.11%), Postives = 231/323 (71.52%), Query Frame = -1

Query:  540 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTS--TTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGII-HXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLI 1499
            AI++SNC+H  G    C+     YM+ FGV +++LSQI +F  I WLS+VAAIMSF YS IGL LGI +V  NG +KGS+ GIS    T  +K+W   QALGDI+FAY YS++LIEIQDT+ S P+E  TMK A+ ISI+ TT FY+ CG +GYAAFGDK PGNLLTGFGFY P+WL+D AN  IV+HLVG YQV++QP+FA +EK  + +FPDS ++  +           +K+NV R  +R+ FV  TT I+ML P+FN V+G+LG + FWPL++YFPV+MY +QR VE WS+KWV LQ  S  CL +TL A VGSI G++
Sbjct:  131 AIKRSNCFHESGGKNPCHMSSNPYMIMFGVTEILLSQIKDFDQIWWLSIVAAIMSFTYSAIGLALGIIQVAANGVVKGSLTGISIGAVTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKIATRISIAVTTTFYMLCGCMGYAAFGDKAPGNLLTGFGFYNPFWLLDVANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSDLVTKEYEIRIPGFRSPYKVNVFRAVYRSGFVVLTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVM 453

HSP 2 Score: 124.02 bits (310), Expect = 1.141e-28
Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            R+G VWTA AHIIT VIG+GVLSLAW++ QLGWIAGP  M+LF+ VT  S+ LL +CY+T DP  G  RN +Y+DAV   LG    ++CGL   + L+G+ + YTI ++IS+  + +
Sbjct:   19 RSGTVWTASAHIITAVIGSGVLSLAWAIGQLGWIAGPTVMLLFSFVTYYSSTLLSDCYRTGDPVSGK-RNYTYMDAVRSILGGFRFKICGLIQYLNLFGITVGYTIAASISMMAIKR 134

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 7.061e-116
Identity = 191/332 (57.53%), Postives = 252/332 (75.90%), Query Frame = -1

Query:  531 TCECRAIQKSNCYHNEGHNAECYFGDAQ--YMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXX--XXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITAR 1514
            TC  RAI KSNCYH  GHNA C +GD    +M+ FG+ Q+ +SQI NFHN+ WLS+VAAIMSF YS IG+GL + K++ N  I+GSIRGI     GEKVW+V QALG+I+F+YP+S+IL+EIQDTL S P+EK TMK AS +++   TFF+ CCG  GYAAFGD TPGNLLTGFGFYEP+WL+DFAN CIVLHLVGGYQVYSQP+FA  E+ ++ K+P++  I + +  KL L      +LN +R+C RT++V  TT +A++FPYFN+VLGV+G + FWPL++YFPV+M   Q+ + +W+  W++L+ FS VCL + L +LVGSI GL+ A+
Sbjct:  135 TCS-RAIMKSNCYHRNGHNATCSYGDNNNYFMVLFGLTQIFMSQIPNFHNMVWLSLVAAIMSFTYSFIGIGLALGKIIENRKIEGSIRGIPAENRGEKVWIVFQALGNIAFSYPFSIILLEIQDTLRSPPAEKQTMKKASTVAVFIQTFFFFCCGCFGYAAFGDSTPGNLLTGFGFYEPFWLVDFANACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFIARFYGFKLPLLRGETVRLNPMRMCLRTMYVLITTGVAVMFPYFNEVLGVVGALAFWPLAVYFPVEMCILQKKIRSWTRPWLLLRGFSFVCLLVCLLSLVGSIYGLVGAK 465

HSP 2 Score: 152.14 bits (383), Expect = 5.432e-38
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = -3

Query: 1828 EEAHSSNQTPXXXXXXXXXXHRTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2241
            E+  S   TP   + H +   RTG +WTAVAHIITGVIGAGVLSLAW+ A+LGWIAGP A++ FA VTL+S +LL +CY+ PDP  GP+R  SY  AV + LGK N  VCG+ V + L+G GIAYTI  A   R ++K
Sbjct:    5 EDDESRVITPTELQLHDSVTARTGTLWTAVAHIITGVIGAGVLSLAWATAELGWIAGPAALIAFAGVTLLSAFLLSDCYRFPDPNNGPLRLNSYSQAVKLYLGKKNEIVCGVVVYISLFGCGIAYTIVIATCSRAIMK 142

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.148e-115
Identity = 173/323 (53.56%), Postives = 234/323 (72.45%), Query Frame = -1

Query:  540 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGIS--TSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXX-XXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLI 1499
            AI++SNC+H  G    C+     YM+ FGV +++LSQ+ +F  I W+S+VAA+MSF YS IGL LGI +V  NG  KGS+ GIS  T T  +K+W   QALGDI+FAY YS++LIEIQDT+ S P+E  TMK A+ ISI+ TT FY+ CG++GYAAFGD  PGNLLTGFGFY P+WL+D AN  IV+HLVG YQV++QP+FA +EK V+ ++PD+  + K+           +K+NV R+ +R+ FV +TT I+ML P+FN V+G+LG + FWPL++YFPV+MY KQR VE WS +WV LQ  S+ CL +++ A VGSI G++
Sbjct:  158 AIKRSNCFHKSGGKDPCHMSSNPYMIVFGVAEILLSQVPDFDQIWWISIVAAVMSFTYSAIGLALGIVQVAANGVFKGSLTGISIGTVTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKKATKISIAVTTIFYMLCGSMGYAAFGDAAPGNLLTGFGFYNPFWLLDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEFEIRIPGFKSPYKVNVFRMVYRSGFVVTTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVM 480

HSP 2 Score: 127.102 bits (318), Expect = 1.395e-29
Identity = 64/117 (54.70%), Postives = 84/117 (71.79%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG VWTA AHIIT VIG+GVLSLAW++AQLGWIAGP  M+LF+ VTL S+ LL +CY+T D   G  RN +Y+DAV   LG    ++CGL   + L+G+ I YTI ++IS+  + +
Sbjct:   46 RTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMLLFSLVTLYSSTLLSDCYRTGDAVSGK-RNYTYMDAVRSILGGFKFKICGLIQYLNLFGIAIGYTIAASISMMAIKR 161

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 362.073 bits (928), Expect = 1.602e-114
Identity = 176/307 (57.33%), Postives = 228/307 (74.27%), Query Frame = -1

Query:  585 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTS--TTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCL 1499
            AI++SNC+H  G    C+     YM+AFG+VQ++ SQI +F  + WLS++AA+MSF YS  GL LGIA+VV NG +KGS+ GIS    T  +K+W   QALGDI+FAY YS+ILIEIQDT+ S PSE+ TMK A+++S+S TT FY+ CG +GYAAFGD +PGNLLTGFGFY PYWL+D AN  IV+HL+G YQVY QPLFA +EK  S++FPDS  I KD K+ +P     +LNV RL +RT+FV  TT I+ML P+FN V+G+LG + FWPL++YFPV+MY  Q+ +  WS +WV LQ FS+ CL
Sbjct:  142 AIKRSNCFHKSGGKDPCHMNSNPYMIAFGLVQILFSQIPDFDQLWWLSILAAVMSFTYSSAGLALGIAQVVVNGKVKGSLTGISIGAVTETQKIWRTFQALGDIAFAYSYSIILIEIQDTVKSPPSEEKTMKKATLVSVSVTTMFYMLCGCMGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSEFIAKDIKIPIPGFKPLRLNVFRLIWRTVFVIITTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCL 448

HSP 2 Score: 127.872 bits (320), Expect = 7.147e-30
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG+VWTA AHIIT VIG+GVLSLAW+ AQLGW+AGP+ M+LF++VT  ++ LL  CY++ DP  G  RN +Y+DAV  NLG     +CG+   + ++G+ I YTI SAIS+  + +
Sbjct:   30 RTGSVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAACYRSGDPISGK-RNYTYMDAVRSNLGGVKVTLCGIVQYLNIFGVAIGYTIASAISMMAIKR 145

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 9.459e-110
Identity = 174/329 (52.89%), Postives = 235/329 (71.43%), Query Frame = -1

Query:  537 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGIS--------TSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLIT 1499
            AIQ+++C    G N  C+     YM+AFG+VQ+I SQI +F  + WLS+VAA+MSFAYS IGLGLG++KVV N  IKGS+ G++        T T+ +K+W   Q+LG+I+FAY YS+ILIEIQDT+ S P+E +TM+ A+ +S++ TT FY+ CG +GYAAFGD  PGNLL   GF  PYWL+D AN+ IV+HLVG YQVY QPLFA VEK  S +FP+S  + K+ K++L     F LN+ RL +RT FV +TT I+ML P+FN V+G+LG I FWPL++YFPV+MY  Q+NV  W  KWV LQ  S+ CL +++ A  GS+ G+++
Sbjct:  140 AIQRTSCQQMNGPNDPCHVNGNVYMIAFGIVQIIFSQIPDFDQLWWLSIVAAVMSFAYSAIGLGLGVSKVVENKEIKGSLTGVTVGTVTLSGTVTSSQKIWRTFQSLGNIAFAYSYSMILIEIQDTVKSPPAEVNTMRKATFVSVAVTTVFYMLCGCVGYAAFGDNAPGNLLAHGGFRNPYWLLDIANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESEFVTKEIKIQLFPGKPFNLNLFRLVWRTFFVMTTTLISMLMPFFNDVVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVS 468

HSP 2 Score: 132.88 bits (333), Expect = 1.924e-31
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG VWTA AHIIT VIG+GVLSLAW++AQ+GWI GP+AM+LF+ VT  ++ LLC+CY++ D   G  RN +Y+DA++ NLG    +VCG+   V L+G  I YTI SAISL  + +
Sbjct:   28 RTGTVWTASAHIITAVIGSGVLSLAWAVAQIGWIGGPVAMLLFSFVTFYTSTLLCSCYRSGDSVTGK-RNYTYMDAIHSNLGGIKVKVCGVVQYVNLFGTAIGYTIASAISLVAIQR 143

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 7.305e-108
Identity = 170/326 (52.15%), Postives = 235/326 (72.09%), Query Frame = -1

Query:  534 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKV----VGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITA 1499
            AI KSNCYH++GH A+C   +  YM AFG+VQ+ILSQ+ NFH + +LS++AA+MSF+Y+ IG+GL IA V    +G   + G++ G+   T  EKVW + QA+GDI+F+Y ++ ILIEIQDTL S+P E   MK AS++ +S TT FY+ CG +GYAAFG++ PG+ LT FGFYEPYWLIDFAN CI LHL+G YQVY+QP F  VE+  + K+P S  I+K++  K+PLL   ++N+ RL +RT +V  TT +AM+FP+FN +LG+LG   FWPL++YFPV M+  Q  V+ +S +W+ L    +VCL ++  A VGSI GLI +
Sbjct:  140 AIGKSNCYHDKGHKAKCSVSNYPYMAAFGIVQIILSQLPNFHKLSFLSIIAAVMSFSYASIGIGLAIATVASGKIGKTELTGTVIGVDV-TASEKVWKLFQAIGDIAFSYAFTTILIEIQDTLRSSPPENKVMKRASLVGVSTTTVFYILCGCIGYAAFGNQAPGDFLTDFGFYEPYWLIDFANACIALHLIGAYQVYAQPFFQFVEENCNKKWPQSNFINKEYSSKVPLLGKCRVNLFRLVWRTCYVVLTTFVAMIFPFFNAILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINS 464

HSP 2 Score: 113.235 bits (282), Expect = 4.216e-25
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG  WTA AHIIT VIG+GVLSLAW++AQLGW+AG   +V FA +T  ++ LL +CY++PD   G  RN +Y+  V   LG    ++CG+   V L G+ I YTIT++ISL  + K
Sbjct:   28 RTGTFWTASAHIITAVIGSGVLSLAWAIAQLGWVAGTTVLVAFAIITYYTSTLLADCYRSPDSITG-TRNYNYMGVVRSYLGGKKVQLCGVAQYVNLVGVTIGYTITASISLVAIGK 143

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 3.115e-107
Identity = 159/325 (48.92%), Postives = 232/325 (71.38%), Query Frame = -1

Query:  534 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTS---TTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITA 1499
            A+ KSNC+H++GH A+C   +  YM  FG++Q+ILSQI NFH + +LS++AA+MSF Y+ IG+GL IA V G    K S+ G +     T  +K+W   QA+GDI+FAY Y+ +LIEIQDTL S+P+E   MK AS++ +S TTFFY+ CG +GYAAFG+  PG+ LT FGF+EP+WLIDFAN CI +HL+G YQV++QP+F  VEK  +  +PD+  I  ++ + +P L  F +++ RL +RT +V  TT +AM+FP+FN +LG++G   FWPL++YFPV+M+  Q  ++ +S +W+ L++   VCL ++L A  GSI GLI++
Sbjct:  149 AVGKSNCFHDKGHTADCTISNYPYMAVFGIIQVILSQIPNFHKLSFLSIMAAVMSFTYATIGIGLAIATVAGGKVGKTSMTGTAVGVDVTAAQKIWRSFQAVGDIAFAYAYATVLIEIQDTLRSSPAENKAMKRASLVGVSTTTFFYILCGCIGYAAFGNNAPGDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEKKCNRNYPDNKFITSEYSVNVPFLGKFNISLFRLVWRTAYVVITTVVAMIFPFFNAILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISS 473

HSP 2 Score: 109.768 bits (273), Expect = 6.021e-24
Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG   TA AHIIT VIG+GVLSLAW++AQLGWIAG   +++F+ +T  ++ +L +CY+ PDP  G  RN +Y+D V   LG    ++CG+     L G+ + YTIT++ISL  V K
Sbjct:   37 RTGTWLTASAHIITAVIGSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLADCYRAPDPVTGK-RNYTYMDVVRSYLGGRKVQLCGVAQYGNLIGVTVGYTITASISLVAVGK 152

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.613e-100
Identity = 158/327 (48.32%), Postives = 230/327 (70.34%), Query Frame = -1

Query:  534 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNG-YIKGSIRGISTS---TTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMS-TPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITA 1499
            A+++SNC+H  GHN +C   +  +M+ F ++Q+ILSQI NFHN+ WLS++AA+MSF Y+ IG+GL IAK  G G +++ ++ G++     +  EK+W   QA+GDI+FAY YS +LIEIQDTL +  PSE   MK AS++ +S TTFFY+ CG +GYAAFG+  PGN LTGFGFYEP+WLIDFAN+CI +HL+G YQV+ QP+F  VE   + ++PD+  I  ++K+ +P    F +N LRL +RT +V  T  +AM+FP+FN  LG++G   FWPL++YFP++M+  Q+ +  +S  W  L+  S  C  ++L A  GS++GLI +
Sbjct:  145 AVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQIPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVRTTLTGVTVGIDVSGAEKIWRTFQAIGDIAFAYAYSTVLIEIQDTLKAGPPSENKAMKRASLVGVSTTTFFYMLCGCVGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQSAKRWPDNKFITGEYKIHVPCCGDFSINFLRLVWRTSYVVVTAVVAMIFPFFNDFLGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQS 471

HSP 2 Score: 109.768 bits (273), Expect = 6.005e-24
Identity = 55/117 (47.01%), Postives = 79/117 (67.52%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG   T  AHIIT VIG+GVLSLAW++AQLGW+AGP  ++ F+ +T  ++ +L +CY++PDP  G  RN +Y++ V   LG    ++CGL     L G+ I YTIT++IS+  V +
Sbjct:   33 RTGTWMTGSAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGK-RNYTYMEVVRSYLGGRKVQLCGLAQYGNLIGITIGYTITASISMVAVKR 148

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: LHTL4_ARATH (Lysine histidine transporter-like 4 OS=Arabidopsis thaliana GN=At3g01760 PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.339e-28
Identity = 95/301 (31.56%), Postives = 149/301 (49.50%), Query Frame = -1

Query:  540 QYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIR-GISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSE--KDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLI 1433
             ++L F   Q +LS + NF++I  +S+VAA+MS +YS I     + K    G   GS+  G    TT   +  +S ALG+++FAY    +++EIQ T+ STP    K  M   ++++     F Y     +G+  FG+    ++L      +P  L+  ANM +V+HL+G YQVY+ P+F  +E  V ++     I H                VLR   R  FVA+T  IA+  PY++ +L   GG  F P + + P  M+   +  + +SL W M     I  L L + A +G +  LI
Sbjct:  161 HFILIFASSQFVLSLLKNFNSISGVSLVAAVMSVSYSTIAWVASLRK----GATTGSVEYGYRKRTTSVPLAFLS-ALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPMWKGAVVAYIIVAFCYFPVALVGFKTFGNSVEESILESLT--KPTALVIVANMFVVIHLLGSYQVYAMPVFDMIES-VMIR-----IWHFSPT-----------RVLRFTIRWTFVAATMGIAVGLPYYSALLSFFGGFVFAPTTYFIPCIMWLILKKPKRFSLSWCMNWFCIIFGLVLMIIAPIGGLAKLI 437

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Match: LHT1_ARATH (Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.680e-27
Identity = 89/301 (29.57%), Postives = 140/301 (46.51%), Query Frame = -1

Query:  537 YMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSE--KDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGS-IEGLIT 1430
            +++ F  V  +LS + NF++I  +S+ AA+MS +YS I      +K    G  +    G    TT   V+     LGD++FAY    +++EIQ T+ STP +  K  M    I++       Y     +GY  FG+    N+L      +P WLI  AN+ +V+H++G YQ+Y+ P+F  +E  +  K                         LR   R  +VA+T  + M FP+F  +L   GG  F P + + P  ++      + +SL W      + VC+   LF +V S I GL T
Sbjct:  161 FIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWASSASK----GVQEDVQYGYKAKTTAGTVFNFFSGLGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNILMSLK--KPAWLIATANIFVVIHVIGSYQIYAMPVFDMMETLLVKKL-----------------NFRPTTTLRFFVRNFYVAATMFVGMTFPFFGGLLAFFGGFAFAPTTYFLPCVIWLAIYKPKKYSLSWWA----NWVCIVFGLFLMVLSPIGGLRT 434

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: V4TZG3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008202mg PE=4 SV=1)

HSP 1 Score: 462.611 bits (1189), Expect = 1.108e-151
Identity = 219/325 (67.38%), Postives = 270/325 (83.08%), Query Frame = -1

Query:  528 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARL 1502
            RAIQKSNCYH EGHNA C +GD ++ML FG VQ+++SQI +FHN++WLSV+AAIMSFAYS IG GLG AKV+ NG IKGSI G+ T+   +K+WL  QALGDI+FAYPYS+IL+EIQDTL S P E  TMK AS+ISI  TTFFYLCCG  GYAAFG+ TPGNLLTGFGFYEPYWLIDFAN CIVLHLVGGYQ+YSQP+FA VE+W + K+P SG ++  +  KLPLLP  ++N+LRLCFRT +V STT +A++FPYFNQVLGVLG + FWPL+IYFPV+MYF Q+ + AW+ KW++L++FS +CL +T+  L+GSIEGLI+A+L
Sbjct:  132 RAIQKSNCYHREGHNAPCAYGDTKHMLLFGAVQVVMSQIPDFHNMEWLSVIAAIMSFAYSFIGFGLGFAKVIENGRIKGSIAGVPTANLADKLWLAFQALGDIAFAYPYSIILLEIQDTLKSPPPENKTMKMASMISIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPVFAFVERWFTRKYPSSGFVNNFYTFKLPLLPPLRVNILRLCFRTAYVVSTTAVAIIFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKKIGAWTRKWIVLRTFSFICLLVTIIGLIGSIEGLISAKL 456

HSP 2 Score: 136.732 bits (343), Expect = 6.659e-31
Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG + + VAHIIT VIG+GVLSLAWS AQLGWIAGP +++ FA VT +S++LL +CY++PDP  G  RN+SYIDAV +NLGKT    CGL   +  YG  +AY +T++ S+R + K
Sbjct:   21 RTGTLRSCVAHIITAVIGSGVLSLAWSTAQLGWIAGPASLLCFAIVTYVSSFLLADCYRSPDPINGK-RNRSYIDAVRLNLGKTQTWFCGLLQNLTFYGTAVAYVMTTSTSMRAIQK 136

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: D7UAP7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01300 PE=4 SV=1)

HSP 1 Score: 462.611 bits (1189), Expect = 1.236e-151
Identity = 225/331 (67.98%), Postives = 279/331 (84.29%), Query Frame = -1

Query:  525 TCEC-RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1514
            T  C RAIQ+SNCYH EGHNA C +GD  YML FGV+Q+++SQI +FHN++WLS+VAAIMSF+Y+ IGLGLG AKVV NG IKGSI GIS S T +K+WLV QALGDI+FAYPYSLIL+EIQDTL + P E  TMK AS+ +I  TTFFYLCCG  GYAAFGD TPGNLLTGFGF+EPYWLIDFAN CI+LHLVGGYQVYSQP+FA VE+WV+ KFP+SG ++K + LKLPLLPAF++N+LR+CFRT +V STT IAM+FPYFNQVLG+LG + FWPL+IYFPV+MY  Q+ + AW+  W++L++FS+VCL +++  LVGS+EG+I+A++ 
Sbjct:  128 TATCMRAIQRSNCYHKEGHNASCAYGDTFYMLLFGVIQIVMSQIPDFHNMEWLSIVAAIMSFSYASIGLGLGFAKVVENGMIKGSIEGISASNTADKIWLVFQALGDIAFAYPYSLILLEIQDTLKAPPPENKTMKKASMSAILITTFFYLCCGCFGYAAFGDDTPGNLLTGFGFFEPYWLIDFANACIILHLVGGYQVYSQPVFAFVERWVTRKFPNSGFVNKFYTLKLPLLPAFQMNLLRICFRTTYVISTTGIAMIFPYFNQVLGLLGALNFWPLAIYFPVEMYLVQKKIGAWTRTWIILRTFSLVCLLVSILTLVGSVEGIISAKVS 458

HSP 2 Score: 133.265 bits (334), Expect = 8.819e-30
Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG +W+ +AHIIT VIGAGVLSLAWS AQLGWIAGP+++  FA VT +S +LL +CY++P P  G  RN  Y+DAV +NLG      CGL   V LYG G AY IT+A  +R + +
Sbjct:   22 RTGTLWSCIAHIITAVIGAGVLSLAWSTAQLGWIAGPISLFCFAVVTYVSAFLLSDCYRSPHPVTG-TRNYCYMDAVRVNLGGKRQWFCGLLQYVNLYGTGTAYVITTATCMRAIQR 137

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: A0A061F3G5_THECC (Amino acid permease 7 isoform 4 OS=Theobroma cacao GN=TCM_030532 PE=4 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 1.251e-151
Identity = 220/325 (67.69%), Postives = 270/325 (83.08%), Query Frame = -1

Query:  528 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARL 1502
            RAIQKSNCYH EGHNA C +GD  YML FG VQ+++SQI +FHN++WLSVVAAIMSF YS IG GLG A+V+ NG IKGSI G+  ++  +K+WL  QALGDI+FAYPYS+IL+EIQDTL S P E  TMK AS+ISI  TTFFYLCCG  GYAAFG+ TPGNLLTGFGFYEPYWLIDFAN CIVLHLVGGYQ+YSQP+FA VE+W + KFP SG ++K +  KLPLLP F++N+ ++CFRT +VASTT +AM+FPYFNQVLGVLG + FWPL+IYFPV+MYF Q+ ++ W+ KW++L+SFS VCL +T+  L+GSI+GLI+A+L
Sbjct:    2 RAIQKSNCYHREGHNAPCSYGDTPYMLLFGAVQVVMSQIPDFHNMEWLSVVAAIMSFTYSFIGFGLGFAQVIENGEIKGSITGVPAASIADKLWLSFQALGDIAFAYPYSIILLEIQDTLRSPPPENKTMKKASMISIFVTTFFYLCCGCFGYAAFGNNTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPVFAFVERWFTEKFPGSGFVNKFYTFKLPLLPTFQINLFKICFRTAYVASTTILAMIFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKKIQPWTRKWIVLRSFSSVCLLVTIVGLIGSIQGLISAKL 326

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: D7UAP6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01290 PE=4 SV=1)

HSP 1 Score: 462.611 bits (1189), Expect = 1.993e-151
Identity = 222/326 (68.10%), Postives = 269/326 (82.52%), Query Frame = -1

Query:  525 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1502
            RAI KSNCYH EGH+A C +GD  +ML FG +Q++ SQI +FHNI+WLSVVAA+MSF YS IGLGLG+AK +G+G IKGSI GISTST  EKVWL+SQALGDI+FAYPYSLI IEIQDTL S P E +TMK AS ++I+ TT FYL CG  GYAAFGD TPGNLLTGFGFYEPYWL+DFAN C+V HLVGGYQ+Y+QPLF  V++W + KFP+SG ++ D+  KLPLLPAF++N+ RLCFRT +V +TT IAM+FPYFNQVLGV+G + FWPL+IYFPV+MYF QR +  W+  W++LQ FS VCL +T+FA VGS+EGLITA+L 
Sbjct:  147 RAINKSNCYHREGHDAACAYGDNSFMLVFGAIQIVTSQIPDFHNIEWLSVVAAVMSFCYSFIGLGLGLAKTIGDGKIKGSIEGISTSTVAEKVWLISQALGDIAFAYPYSLISIEIQDTLKSPPPESETMKKASTLAITVTTLFYLFCGGFGYAAFGDDTPGNLLTGFGFYEPYWLVDFANACVVAHLVGGYQIYTQPLFGMVDRWSAQKFPNSGFVNNDYVFKLPLLPAFRVNLFRLCFRTAYVGTTTGIAMIFPYFNQVLGVIGAMNFWPLAIYFPVEMYFVQRKIGVWTRMWLLLQIFSFVCLVVTVFAFVGSVEGLITAKLS 472

HSP 2 Score: 177.948 bits (450), Expect = 5.545e-45
Identity = 91/148 (61.49%), Postives = 117/148 (79.05%), Query Frame = -3

Query: 1828 KAMEEAHSSNQTPXXXXXXXXX-------XHRTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2250
            KAMEE    ++TPLLN  + +          RTG++WTAVAHIITGVIG+GVLSLAW +AQLGWIAGP++M+LFA VTL+ST+LLC+ Y++PDPE GP RN+SY++AV++NLG  +A VC L V + LYG+GIAYTITSAIS+R + K
Sbjct:    4 KAMEETAGDHETPLLNSTYVSGVQPVESPTKRTGSLWTAVAHIITGVIGSGVLSLAWCVAQLGWIAGPVSMLLFAFVTLLSTFLLCDSYRSPDPECGPGRNRSYLEAVHINLGSRSAWVCALVVYISLYGIGIAYTITSAISMRAINK 151

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: A0A067GF66_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012458mg PE=4 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 2.419e-151
Identity = 226/326 (69.33%), Postives = 267/326 (81.90%), Query Frame = -1

Query:  525 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1502
            RAIQKSNCYH EGH A C + D  YML FG VQLILSQ  +FHNIQ LSV+AA+MSFAYS IG GLG+AKV+GNG++ GS  G+ST+T+ EK+WLV+QALGDI+FAYPYSLILIEIQDTL S P    TMK AS +SI  TT FYL CG  GYAAFGD TPGNLLTGFGFYEPYWLID AN  IV+HLVGGYQVYSQP+FA+ EKW+  KFP++G ++ +F LK PL+PAF+ N LRLCFRT++V S T IAM FPYFNQVLGV+GG+ FWPL+IYFPV+MYFKQ N+EAW+ KWVML+ FS VC  ++ F LVGSI+G+I+A+L 
Sbjct:   54 RAIQKSNCYHREGHEAACEYSDTYYMLIFGAVQLILSQAPDFHNIQSLSVIAAVMSFAYSFIGFGLGVAKVIGNGFVMGSFSGVSTTTSIEKMWLVAQALGDIAFAYPYSLILIEIQDTLKSPPPANQTMKKASTMSIITTTIFYLFCGGFGYAAFGDNTPGNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISAKLS 379

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: A0A067G5Z0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012458mg PE=4 SV=1)

HSP 1 Score: 458.373 bits (1178), Expect = 2.424e-151
Identity = 226/326 (69.33%), Postives = 267/326 (81.90%), Query Frame = -1

Query:  525 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1502
            RAIQKSNCYH EGH A C + D  YML FG VQLILSQ  +FHNIQ LSV+AA+MSFAYS IG GLG+AKV+GNG++ GS  G+ST+T+ EK+WLV+QALGDI+FAYPYSLILIEIQDTL S P    TMK AS +SI  TT FYL CG  GYAAFGD TPGNLLTGFGFYEPYWLID AN  IV+HLVGGYQVYSQP+FA+ EKW+  KFP++G ++ +F LK PL+PAF+ N LRLCFRT++V S T IAM FPYFNQVLGV+GG+ FWPL+IYFPV+MYFKQ N+EAW+ KWVML+ FS VC  ++ F LVGSI+G+I+A+L 
Sbjct:   50 RAIQKSNCYHREGHEAACEYSDTYYMLIFGAVQLILSQAPDFHNIQSLSVIAAVMSFAYSFIGFGLGVAKVIGNGFVMGSFSGVSTTTSIEKMWLVAQALGDIAFAYPYSLILIEIQDTLKSPPPANQTMKKASTMSIITTTIFYLFCGGFGYAAFGDNTPGNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISAKLS 375

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: V4TZG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008211mg PE=4 SV=1)

HSP 1 Score: 457.988 bits (1177), Expect = 4.237e-151
Identity = 225/326 (69.02%), Postives = 267/326 (81.90%), Query Frame = -1

Query:  525 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1502
            RAIQKSNCYH EGH A C + D  YML FG VQLILSQ  +FHNIQ LSV+AA+MSFAYS IG GLG+AKV+GNG++ GS  G+ST+T+ EK+WLV+QALGDI+FAYPYSL+LIEIQDTL S P    TMK AS +SI  TT FYL CG  GYAAFGD TPGNLLTGFGFYEPYWLID AN  IV+HLVGGYQVYSQP+FA+ EKW+  KFP++G ++ +F LK PL+PAF+ N LRLCFRT++V S T IAM FPYFNQVLGV+GG+ FWPL+IYFPV+MYFKQ N+EAW+ KWVML+ FS VC  ++ F LVGSI+G+I+A+L 
Sbjct:   54 RAIQKSNCYHREGHEAACEYSDTYYMLIFGAVQLILSQAPDFHNIQSLSVIAAVMSFAYSFIGFGLGVAKVIGNGFVMGSFSGVSTTTSIEKMWLVAQALGDIAFAYPYSLVLIEIQDTLKSPPPANQTMKKASTMSIITTTIFYLFCGGFGYAAFGDNTPGNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISAKLS 379

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: A0A067G343_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012458mg PE=4 SV=1)

HSP 1 Score: 455.292 bits (1170), Expect = 8.783e-151
Identity = 225/325 (69.23%), Postives = 266/325 (81.85%), Query Frame = -1

Query:  525 AIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1499
            AIQKSNCYH EGH A C + D  YML FG VQLILSQ  +FHNIQ LSV+AA+MSFAYS IG GLG+AKV+GNG++ GS  G+ST+T+ EK+WLV+QALGDI+FAYPYSLILIEIQDTL S P    TMK AS +SI  TT FYL CG  GYAAFGD TPGNLLTGFGFYEPYWLID AN  IV+HLVGGYQVYSQP+FA+ EKW+  KFP++G ++ +F LK PL+PAF+ N LRLCFRT++V S T IAM FPYFNQVLGV+GG+ FWPL+IYFPV+MYFKQ N+EAW+ KWVML+ FS VC  ++ F LVGSI+G+I+A+L 
Sbjct:    2 AIQKSNCYHREGHEAACEYSDTYYMLIFGAVQLILSQAPDFHNIQSLSVIAAVMSFAYSFIGFGLGVAKVIGNGFVMGSFSGVSTTTSIEKMWLVAQALGDIAFAYPYSLILIEIQDTLKSPPPANQTMKKASTMSIITTTIFYLFCGGFGYAAFGDNTPGNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISAKLS 326

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: B9T658_RICCO (Amino acid transporter, putative OS=Ricinus communis GN=RCOM_0415150 PE=4 SV=1)

HSP 1 Score: 459.529 bits (1181), Expect = 1.731e-150
Identity = 218/326 (66.87%), Postives = 272/326 (83.44%), Query Frame = -1

Query:  525 RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARLK 1502
            RAI+KSNCYH EGH+A C F D  YML FG  Q+I+SQI +FHN++WLS++AA+MSF YS IG GLG+A+V+ NGY  GSI G+S S+  +KVW +SQALGDI+FAYPYSLIL+EIQDTL S P+E +TM+ AS I++  TTFFYLCCGA GYAAFG+ TPGNLLTGFGFYEPYWLIDFAN CIVLHLVGGYQVYSQP+FA +EKW + + P S  I+ ++ LKLPLLPAF LN  R+CFRT++V STT I+M+FPYFNQV+G+LG + FWPL+IYFPV+MYF+QRN+EAW++KW+ML++FSIV   +   ALVGS+EG+I+A+L 
Sbjct:  136 RAIRKSNCYHKEGHSAACEFSDTSYMLIFGAFQIIVSQIPDFHNMEWLSILAAVMSFTYSSIGFGLGLAQVIENGYAMGSITGVSASSAADKVWNISQALGDIAFAYPYSLILLEIQDTLKSPPTENETMRKASTIALVVTTFFYLCCGAFGYAAFGEDTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQVYSQPVFATIEKWFAERHPASRFINNNYSLKLPLLPAFGLNAFRICFRTLYVVSTTAISMIFPYFNQVIGLLGALNFWPLTIYFPVEMYFRQRNIEAWTIKWIMLRAFSIVVFLVAAIALVGSVEGVISAKLS 461

HSP 2 Score: 179.874 bits (455), Expect = 1.149e-45
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = -3

Query: 1828 MEEAHSSNQTPXXXXXXXXXX-HRTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2244
            M E     +TPLL K+       RTG +WTAVAHIITGVIG+GVLSLAWSMAQLGWIAGPL M+ FA VTL+STYLLC+CY+ P PE+GP RN+SY+ AV+++LGK  + +CG+FV++ LYG GIAYTITSAIS+R + K
Sbjct:    1 MGEEVEPQETPLLQKQAAETALERTGTLWTAVAHIITGVIGSGVLSLAWSMAQLGWIAGPLTMMCFALVTLLSTYLLCDCYRFPHPELGPSRNRSYLQAVDVSLGKKASWICGIFVELSLYGTGIAYTITSAISMRAIRK 140

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Match: A0A067G5Z4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012295mg PE=4 SV=1)

HSP 1 Score: 459.529 bits (1181), Expect = 1.959e-150
Identity = 219/330 (66.36%), Postives = 271/330 (82.12%), Query Frame = -1

Query:  528 TCEC-RAIQKSNCYHNEGHNAECYFGDAQYMLAFGVVQLILSQINNFHNIQWLSVVAAIMSFAYSIIGLGLGIAKVVGNGYIKGSIRGISTSTTGEKVWLVSQALGDISFAYPYSLILIEIQDTLMSTPSEKDTMKTASIISISATTFFYLCCGALGYAAFGDKTPGNLLTGFGFYEPYWLIDFANMCIVLHLVGGYQVYSQPLFANVEKWVSVKFPDSGIIHXXXXXXXXXXXXXXLNVLRLCFRTIFVASTTTIAMLFPYFNQVLGVLGGIYFWPLSIYFPVQMYFKQRNVEAWSLKWVMLQSFSIVCLPLTLFALVGSIEGLITARL 1514
            T  C RAIQKSNCYH EGHNA C +GD ++ML FG VQ+++SQI +FHN++WLSV+AAIMSFAYS IG GLG AKV+ NG IKGSI G+ T+   +K+WL  QALGDI+FAYPYS+IL+EIQDTL S P E  TMK AS+ISI  TTFFYLCCG  GYAAFG+ TPGNLLTGFGFYEPYWLID AN CIVLHLVGGYQ++SQP+FA VE+W + K+P SG ++  +  KLPLLP  ++N+LRLCFRT +V STT +A++FPYFNQVLGVLG + FWPL+IYFPV+MYF Q+ + AW+ KW++L++FS +CL +T+  L+GSIEGLI+A+L
Sbjct:  136 TANCLRAIQKSNCYHREGHNAPCAYGDTKHMLLFGAVQVVMSQIPDFHNMEWLSVIAAIMSFAYSFIGFGLGFAKVIENGRIKGSIAGVPTANLADKLWLAFQALGDIAFAYPYSIILLEIQDTLKSPPPENKTMKMASMISIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFYEPYWLIDLANACIVLHLVGGYQIFSQPVFAFVERWFTRKYPSSGFVNNFYTFKLPLLPPLRVNILRLCFRTAYVVSTTAVAIIFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKKIGAWTRKWIVLRTFSFICLLVTIIGLIGSIEGLISAKL 465

HSP 2 Score: 162.925 bits (411), Expect = 7.722e-40
Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = -3

Query: 1828 RTGNVWTAVAHIITGVIGAGVLSLAWSMAQLGWIAGPLAMVLFASVTLISTYLLCNCYKTPDPEVGPVRNQSYIDAVNMNLGKTNARVCGLFVQVGLYGMGIAYTITSAISLRCVVK 2178
            RTG + TA+AHIITGVIGAGVLSLAWSMAQLGWIAGPL M+ FASVT++S+ LLC+CY+ PDPEVGP R +S+  AV + LG  N +VCG+FVQ  LYG GI YT T+A  LR + K
Sbjct:   29 RTGTICTALAHIITGVIGAGVLSLAWSMAQLGWIAGPLCMIAFASVTIVSSSLLCDCYRFPDPEVGPNRIRSFTQAVKLYLGDKNQKVCGIFVQESLYGAGITYTFTTANCLRAIQK 145

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 18


Match Name	E-value	Identity	Description
AAP4_ARATH	1.954e-116	55.11	Amino acid permease 4 OS=Arabidopsis thaliana GN=A...	[more]
AAP7_ARATH	7.061e-116	57.53	Probable amino acid permease 7 OS=Arabidopsis thal...	[more]
AAP2_ARATH	4.148e-115	53.56	Amino acid permease 2 OS=Arabidopsis thaliana GN=A...	[more]
AAP3_ARATH	1.602e-114	57.33	Amino acid permease 3 OS=Arabidopsis thaliana GN=A...	[more]
AAP5_ARATH	9.459e-110	52.89	Amino acid permease 5 OS=Arabidopsis thaliana GN=A...	[more]
AAP8_ARATH	7.305e-108	52.15	Amino acid permease 8 OS=Arabidopsis thaliana GN=A...	[more]
AAP1_ARATH	3.115e-107	48.92	Amino acid permease 1 OS=Arabidopsis thaliana GN=A...	[more]
AAP6_ARATH	2.613e-100	48.32	Amino acid permease 6 OS=Arabidopsis thaliana GN=A...	[more]
LHTL4_ARATH	6.339e-28	31.56	Lysine histidine transporter-like 4 OS=Arabidopsis...	[more]
LHT1_ARATH	4.680e-27	29.57	Lysine histidine transporter 1 OS=Arabidopsis thal...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0096981 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
V4TZG3_9ROSI	1.108e-151	67.38	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
D7UAP7_VITVI	1.236e-151	67.98	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A061F3G5_THECC	1.251e-151	67.69	Amino acid permease 7 isoform 4 OS=Theobroma cacao...	[more]
D7UAP6_VITVI	1.993e-151	68.10	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A067GF66_CITSI	2.419e-151	69.33	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067G5Z0_CITSI	2.424e-151	69.33	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4TZG8_9ROSI	4.237e-151	69.02	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A067G343_CITSI	8.783e-151	69.23	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
B9T658_RICCO	1.731e-150	66.87	Amino acid transporter, putative OS=Ricinus commun...	[more]
A0A067G5Z4_CITSI	1.959e-150	66.36	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 17..334 e-value: 1.8E-65 score: 221.1
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 13..225 coord: 247..339
None	No IPR available	PANTHER	PTHR22950:SF228	AMINO ACID PERMEASE 7-RELATED	coord: 13..225 coord: 247..339
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 308..330
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..127
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..86
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 331..339
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 187..208
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 297..307
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 277..296
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 87..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..167
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..147
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 209..250
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 251..271
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 168..186
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 272..276
None	No IPR available	TMHMM	TMhelix		coord: 146..168
None	No IPR available	TMHMM	TMhelix		coord: 266..288
None	No IPR available	TMHMM	TMhelix		coord: 183..205
None	No IPR available	TMHMM	TMhelix		coord: 60..82
None	No IPR available	TMHMM	TMhelix		coord: 107..126
None	No IPR available	TMHMM	TMhelix		coord: 308..330

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0096981 ID=g.barbadense_cottongen_reftransV1_0096981; Name=g.barbadense_cottongen_reftransV1_0096981; organism=Gossypium barbadense; type=contig; length=2279bp
GGAAATGATTTTTGCTATTTAAATAATGTGTAGAAAAAGAAATGAATAGT
TGCTAAAAAATGTATTCATTTTCCTTATTTTCTTTGGGCTCCCAACCCAT
TGGATTCAGAAAAGCCCAAAGTTTCTAATTTGAAACAATAAGAAGATTAG
AACTTGGAGGAAATTCAGCAAGGATCAAATACGCCTAATCACTAGGAGAA
GGTTTAATGATACATAAATATAGGAACATGACTCGAATACATAAATACAC
GAATTTACACACAAACCTTGCTGATAAATCATTCAAAAATTACCCACATT
CCAAATGCTCAAGCACACACACCATTGAATTCTCTCAAGGAGATGATTAT
TTGATTCCAACACTACAATCCCAATACCATGTTTCCTAATCTCCTGAAAA
AGTACAAAGGCTTATTGTAATTTCCAACTAAATGTAAATCTAACTTCATA
CATTTCTATACAAGTACAATCCTAATGTTTCTTTCTCTTCCCCATGATTG
TCTAGAATCAATGGAGTTGCTTTATTTTAATCTTGCGGTTATGAGCCCTT
CAATCGACCCGACCAGGGCGAACAATGTCAGTGGAAGGCACACAATGCTG
AAACTTTGGAGCATGACCCACTTTAGTGACCAGGCTTCAACGTTTCTCTG
CTTGAAGTACATCTGCACTGGAAAGTATATTGATAGGGGCCAGAAGTAGA
TGCCTCCTAATACTCCCAAAACTTGGTTGAAATATGGGAATAACATGGCA
ATTGTTGTTGTCGAAGCTACGAAAATGGTGCGGAAGCATAATCTAAGAAC
GTTTAATTTAAAAGCTGGCAAAAGTGGGAGTTTCAACTTGAAATCCTTGT
GTATGATTCCACTGTCCGGAAATTTCACTGAGACCCATTTCTCAACGTTT
GCAAATAGTGGCTGGCTGTAAACCTGATATCCTCCAACTAGGTGAAGAAC
AATGCACATATTAGCAAAGTCGATGAGCCAATATGGTTCGTAAAATCCAA
AACCAGTCAAGAGATTCCCTGGTGTCTTATCTCCAAAGGCTGCATATCCA
AGTGCTCCACAACAGAGATAGAAAAAGGTTGTGGCAGAAATTGATATTAT
TGAAGCTGTCTTCATTGTGTCCTTCTCAGAAGGAGTTGACATTAAAGTAT
CCTGTATCTCAATAAGAATTAGGGAGTAGGGATAGGCGAATGATATGTCT
CCAAGTGCTTGAGAAACCAGCCAAACTTTCTCACCGGTAGTAGAAGTTGA
GATTCCTCGAATGGAACCCTTAATATAACCATTTCCTACGACTTTAGCAA
TGCCAAGTCCAAGACCAATGATAGAATAAGCAAAGGACATGATTGCAGCA
ACCACCGATAGCCATTGTATGTTGTGAAAATTATTTATCTGAGACAGTAT
TAATTGAACAACTCCAAAAGCTAGCATATACTGAGCATCTCCAAAATAAC
ATTCAGCATTATGCCCTTCATTGTGGTAACAGTTGGATTTTTGAATTGCT
CTGCATTCACAAGTAAAATAGGCATTGGCAACCAAAACCATACCTCTAAA
AAGAGGAAAATCAATAGCAACAACCTATGTTACTCGGACTGGGGTGCGAG
TGTTGGTCTGCCACAGGTATGTTCAATTCTTTTCAAGTTTTTTCATGTAT
TTGGAAGGTCCTTGAAGGGTCATACTCATACTCATGTCTATACATGCATC
TGATATGGGGGTCGAACATAGATACTTCAAGAAAATGAAGAGTCGGAGTA
ACATAAGCAGCAACGGCAGCATCTTTTGCTGAACTAGCCATAGTAAATTA
GGATCAAGCAGTTGGAGTAAAAGGAACCTTAACAACACACCTCAGGCTAA
TAGCAGATGTTATTGTATATGCTATTCCCATACCATACAAGCCTACTTGA
ACAAAAAGGCCGCAAACCCTTGCATTGGTTTTCCCTAAATTCATGTTAAC
AGCATCGATGTAGGATTGATTTCTGACGGGTCCAACTTCAGGATCAGGCG
TTTTATAACAGTTGCAGAGAAGATACGTGGAAATCAAAGTTACGGACGCG
AAGAGCACCATAGCCAAAGGTCCGGCAATCCACCCCAACTGAGCCATGCT
CCACGCCAGAGATAGCACCCCGGCGCCTATGACCCCCGTTATTATATGCG
CCACCGCCGTCCATACATTCCCGGTTCTATGGAGATGATTATGATGCTTC
TTGTTCAACAATGGGGTTTGATTACTAGAATGAGCTTCTTCCATGGCCTT
TTTAGTTTAGCATTTAAGTATAATTTTGG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

Search form

g.barbadense_cottongen_reftransV1_0096981, g.barbadense_cottongen_reftransV1_0096981 (contig) Gossypium barbadense

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