g.barbadense_cottongen_reftransV1_0091728, g.barbadense_cottongen_reftransV1_0091728 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.706e-19 Identity = 50/150 (33.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 C++ +VEELK++I ++PVW+TGI+ A YS + + V+Q +TMD+H+ F+IP+ S ++ + +YD+ I+PLA K + QRM GL+ S AM++ V++ +R + D+ Q +H+S W +P ++ G Sbjct: 318 CSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQ--IHMSIFWQIPQYLLIG 465
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR10_ARATH (Protein NRT1/ PTR FAMILY 5.16 OS=Arabidopsis thaliana GN=NPF5.16 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.046e-19 Identity = 52/164 (31.71%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSGWVRISLELDRQNSF 610 C+ VE+ AL+R+IP+W T ++ + Y+ +F Q T+DR I P F+IP SF A + ++ + + Y+R+ LPLA + +P ++ QR+ G++ S MV +V+ R E A + GL D+P A + +S W +P ++ G + + + Q F Sbjct: 312 CSSRDVEDAMALVRLIPIWITSVVSTIPYAQYATFFTKQGVTVDRKILPGFEIPPASFQALIGLSIFISVPTYERVFLPLARLITKKPSGITMLQRIGAGMVLSSLNMVVAALVEMKRLETAKEHGLVDRPDATIPMSIWWFVPQYLLLGMIDVFSLVGTQEFF 475
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR11_ARATH (Protein NRT1/ PTR FAMILY 5.15 OS=Arabidopsis thaliana GN=NPF5.15 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.487e-19 Identity = 54/160 (33.75%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 95 AMLQTHGVF-CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 AM+ GV C+ V++ KAL+R+IP+W T ++ + Y+ +F Q T+DR I P +IPA S + V ++ ++ + LY+R+ LP+A K+ +P ++ QR+ G++ S M+ +V+ R +IA + GL DKP V +S W +P ++ G Sbjct: 306 AMISREGVEPCSGRDVDDAKALVRLIPIWITYVVSTIPYAQYITFFTKQGVTVDRRILPGVEIPAASLLSFVGVSILISVPLYERVFLPIARKITKKPFGITMLQRIGAGMVLSVFNMMLAALVESKRLKIAREHGLVDKPDVTVPMSIWWFVPQYLLLG 465
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR13_ARATH (Protein NRT1/ PTR FAMILY 2.12 OS=Arabidopsis thaliana GN=NPF2.12 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.614e-18 Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWI-LPYAIMS 565 C+I VEE+K LIRV+PVWS GII V + +F V Q + MDRH+ P F+IPA S IT + + +Y+ +++P +M+ V L QRM G++ + +M + V+ +RR A + M +S W+ LP +M Sbjct: 312 CSIQEVEEVKCLIRVVPVWSAGIISIVAMTTQATFMVFQATKMDRHMGPHFEIPAASITVISYITIGIWVPIYEHLLVPFLWRMRKFRVTL--LQRMGIGIVFAILSMFTAGFVEGVRRTRATE---------MTQMSVFWLALPLILMG 450 HSP 2 Score: 28.4906 bits (62), Expect = 3.614e-18 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120 +FL+KA VI + DLTS+G +N W L Sbjct: 285 FKFLDKAAVILD--GDLTSEGVPANKWRL 311
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR22_ARATH (Protein NRT1/ PTR FAMILY 5.14 OS=Arabidopsis thaliana GN=NPF5.14 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.314e-18 Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 137 VEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 VE+ ALIR+IPVW T + A+ Y+ +F Q TMDR I P IP S + I+ V+ + +YDR+ +P+A + EP ++ +R+ TG++ S MV +V++ R E A + GL D+P+A + +S W++P ++ G Sbjct: 310 VEDATALIRLIPVWFTTLAYAIPYAQYMTFFTKQGVTMDRTILPGVKIPPASLQVFIGISIVLFVPIYDRVFVPIARLITKEPCGITTLKRIGTGIVLSTITMVIAALVEFKRLETAKEHGLIDQPEATLPMSIWWLIPQYLLLG 454
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.697e-18 Identity = 49/150 (32.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 CT+ +VEELKALIR++P+W+TGI+ A YS + + V+Q +T+D+H+ P F IP+ S ++ + +YD++I+P A K G + QR+ GL+ S +MVS +++ R L + + + ++ W +P + G Sbjct: 318 CTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYN--EETIPMTIFWQVPQYFLVG 465
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR44_ARATH (Protein NRT1/ PTR FAMILY 2.10 OS=Arabidopsis thaliana GN=NPF2.10 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.234e-17 Identity = 44/155 (28.39%), Postives = 85/155 (54.84%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVW--STGIIIAVTYSLDSFAVIQTSTMDRHI-TPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQE---GLSDKPQAMVHISALWILPYAIMSG 568 CT+ +VEE+K ++RVIP+W ST +A+T + ++ V Q DR + + F IPA ++ ++ V I YDR+++P ++ G +S QR+ G + +++ ++ RR A+ + G++ + + +SALW++P ++G Sbjct: 357 CTLQQVEEVKCIVRVIPIWFASTIYYLAITIQM-TYPVFQALQSDRRLGSGGFRIPAATYVVFLMTGMTVFIIFYDRVLVPSLRRVTGLETGISLLQRIGAGFTFAIMSLLVSGFIEERRRNFALTKPTLGMAPRTGEISSMSALWLIPQLTLAG 510 HSP 2 Score: 37.3502 bits (85), Expect = 2.234e-17 Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120 RFL+KA ++ P++ L SDG AS+PW L Sbjct: 329 FRFLDKAAIM-TPEEKLNSDGTASDPWKL 356 HSP 3 Score: 22.3274 bits (46), Expect = 2.234e-17 Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 1 Query: 568 LGSDFIGIGQTEFFYSE 618 + F IGQ EF+Y + Sbjct: 511 IAEAFAAIGQMEFYYKQ 527
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR25_ARATH (Protein NRT1/ PTR FAMILY 5.12 OS=Arabidopsis thaliana GN=NPF5.12 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.239e-17 Identity = 48/150 (32.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 C VEE KA++ +IP+W ++ + ++ +F Q STMDR I+ +PA + + + +V I +YDR+ +P+A + +P ++ QR+ TG+ S +MV +V+ R + A GL D P+A V +S W++P I+ G Sbjct: 305 CDSYEVEEAKAVLSLIPIWLCSLVFGIVFAQSPTFFTKQGSTMDRSISSTLQVPAATLQCFISLAILVFIPIYDRLFVPIARSITRKPAGITTLQRISTGIFLSIISMVIAALVEMKRLKTARDHGLVDSPKATVPMSVCWLIPQYILFG 454
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR17_ARATH (Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana GN=NPF8.5 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.573e-17 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSGWVRISLELDRQNSF 610 CT+ +VEE+K LIR+ P+W++GI+ +V YS + + V Q +M+R I F+IP SFG + ++ I +YDR ++P + G P L+ QRM GL S ++ + +V+ +R ++A Q V +S W +P I+ G + + R F Sbjct: 350 CTVTQVEEVKTLIRMFPIWASGIVYSVLYSQISTLFVQQGRSMNR-IIRSFEIPPASFGVFDTLIVLISIPIYDRFLVPFVRRFTGIPKGLTDLQRMGIGLFLSVLSIAAAAIVETVRLQLA---------QDFVAMSIFWQIPQYILMGIAEVFFFIGRVEFF 503
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR8_ARATH (Protein NRT1/ PTR FAMILY 2.9 OS=Arabidopsis thaliana GN=NPF2.9 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.971e-17 Identity = 50/155 (32.26%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTY-SLDSFAVIQTSTMDRHITP-KFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGL-LCSCAAMVSLTVVKYIRREIAIQE---GLSDKPQAMVHISALWILPYAIMSG 568 C++ +VEE+K +IRV+PVW + + + Y ++ + Q+ DR + P F IPAGS+ +++ + I +YDR+++P K G ++ QR+ GL LC + MVS V +Y RR++A+ + GL+ + A+ +S +W++P ++ G Sbjct: 315 CSMQQVEEVKCVIRVLPVWLSAALFYLAYIQQTTYTIFQSLQSDRRLGPGSFQIPAGSYTVFLMLGMTIFIPIYDRVLVPFLRKYTGRDGGITQLQRVGAGLFLCITSMMVSAIVEQY-RRKVALTKPTLGLAPRKGAISSMSGMWLIPQLVLMG 468
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2QJU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 4.342e-164 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 43 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 316 HSP 2 Score: 100.138 bits (248), Expect = 4.199e-19 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 1937 IGRHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2098 +G+HEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 11 LGKHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 64
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2PTW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 1.307e-163 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 84 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 357 HSP 2 Score: 98.5969 bits (244), Expect = 1.763e-18 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 54 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 105 HSP 3 Score: 97.0561 bits (240), Expect = 5.380e-18 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = -2 Query: 2840 MYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSK 3001 MYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ Sbjct: 1 MYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSR 54
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2LTZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 506.523 bits (1303), Expect = 2.003e-163 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 214 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 487 HSP 2 Score: 266.159 bits (679), Expect = 2.332e-74 Identity = 128/188 (68.09%), Postives = 148/188 (78.72%), Query Frame = -2 Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388 P + S+N+L FSSC+IGL SLNSK+ +K SQSS FN SNSP++ACSS++ ++ETSS A+ R VSV+PVYVPTP NR+TRTPHSGYHFDGTTRQFFEGWYFKVSIP RKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ L Sbjct: 3 PNIYSLNQLHQFSSCFIGLHSLNSKSTLKFSQSSTFNASPRELGPLRLGFR-SNSPVVACSSVSEIESETSSPAAKRSVSVSPVYVPTPVNRETRTPHSGYHFDGTTRQFFEGWYFKVSIPARKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSRHELAL 189 HSP 3 Score: 101.679 bits (252), Expect = 6.009e-19 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 184 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 235
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0MHV0_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_13574 PE=4 SV=1) HSP 1 Score: 493.426 bits (1269), Expect = 2.519e-158 Identity = 244/277 (88.09%), Postives = 251/277 (90.61%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TVK ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMAS WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLT AGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 215 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVKTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMAS-----WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTAAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 483 HSP 2 Score: 268.47 bits (685), Expect = 3.118e-75 Identity = 139/184 (75.54%), Postives = 156/184 (84.78%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 S+N+L FSSC+IGL S NSK+ +K SQSS FN PR LRPLRLGFRSNSP++AC S++ +TETSS A+ R VSV+PVYVPTP NRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ L Sbjct: 7 SLNQLHQFSSCFIGLHSQNSKSTLKFSQSSTFNAFSPRELRPLRLGFRSNSPVVACRSVSEIETETSSPAAKRSVSVSPVYVPTPVNRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGAKGKYICQYSEESQNFWGSRHELTL 190 HSP 3 Score: 102.834 bits (255), Expect = 2.474e-19 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPPSKEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 185 RHELTLGNTFVANKASRPPSKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2Q9A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 472.241 bits (1214), Expect = 4.451e-153 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 22 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 295
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2UGJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 5.370e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 132 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 405 HSP 2 Score: 181.8 bits (460), Expect = 1.047e-45 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = -2 Query: 2825 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3088 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 20 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 107 HSP 3 Score: 115.931 bits (289), Expect = 6.855e-24 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 102 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 153
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2TDW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 5.574e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488 HSP 2 Score: 299.671 bits (766), Expect = 4.846e-86 Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGSK +L Sbjct: 7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSKHELIL 190 HSP 3 Score: 110.923 bits (276), Expect = 6.312e-22 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 +HELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 KHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2RUB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 5.939e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488 HSP 2 Score: 298.516 bits (763), Expect = 1.197e-85 Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190 HSP 3 Score: 112.079 bits (279), Expect = 2.672e-22 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A061GK03_THECC (Tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) isoform 1 OS=Theobroma cacao GN=TCM_037170 PE=4 SV=1) HSP 1 Score: 454.521 bits (1168), Expect = 2.015e-143 Identity = 219/277 (79.06%), Postives = 237/277 (85.56%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RT+Y VK ARWEYSTRP YGWG+VGSKQKSTAGWLAA PIFEPHWQICMA GLSTGWIEWD ERFEFQ+APSYSEKNWGGGFPRKWFWAQCNVFEGASG++SLT GGLRQLPGLTETFEN ALIGVHYDG+FYEFVPWNGVV+WEIAQWG W + A+N+TH+ ELEATT D GTTL APT AGL PAC DTC GDL LKIWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKG+TTTPEV+K ALQ Sbjct: 216 KVLEGFQV---SPLWHQGFIRDDGRTTYANIVKTARWEYSTRPIYGWGNVGSKQKSTAGWLAALPIFEPHWQICMAGGLSTGWIEWDSERFEFQNAPSYSEKNWGGGFPRKWFWAQCNVFEGASGEVSLTAGGGLRQLPGLTETFENAALIGVHYDGVFYEFVPWNGVVSWEIAQWGSWYMEAKNETHMAELEATTNDPGTTLRAPTTVAGLAPACKDTCFGDLRLKIWEKKSGGTKGKLILDVKSDMAALEVGGGPWFNTWKGETTTPEVIKNALQ 489 HSP 2 Score: 273.092 bits (697), Expect = 1.014e-76 Identity = 145/189 (76.72%), Postives = 161/189 (85.19%), Query Frame = -2 Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDR-PVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388 P + S+NEL HFSSC IG R LNSK VK SQSS FNG PR LRPLR+GFRSNS IIACSS+A +T TSS A++ VSVNPVYVPTPANR+ RTPHSGYHFDGTTRQFFEGWYFKV+IPE++QSFCFMYSVENP FRRKLT LE LQHGPRFTGVGAQILGAYD+YICQY++ESQNFWGS+ +L Sbjct: 3 PNIYSVNELHHFSSCCIGFRPLNSKPTVKFSQSSTFNGFSPRGLRPLRVGFRSNSRIIACSSVAEPETGTSSPAAESSAVSVNPVYVPTPANRNARTPHSGYHFDGTTRQFFEGWYFKVAIPEQRQSFCFMYSVENPAFRRKLTPLEMLQHGPRFTGVGAQILGAYDKYICQYTEESQNFWGSRHELIL 191 HSP 3 Score: 113.235 bits (282), Expect = 1.142e-22 Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANK+SRPPSKEVPP+EFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 186 RHELILGNTFLANKDSRPPSKEVPPQEFNRKVLEGFQVSPLWHQGFIRDDGR 237
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0N809_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_11502 PE=4 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 9.507e-143 Identity = 222/277 (80.14%), Postives = 239/277 (86.28%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK A WEY+TRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNG+++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+I K GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTACWEYTTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA-----GWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGILSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIRVKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 483 HSP 2 Score: 324.709 bits (831), Expect = 5.473e-95 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHF SCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTAS+RPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 7 SINELRHFPSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASNRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190 HSP 3 Score: 114.005 bits (284), Expect = 6.363e-23 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFL NKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 RHELILGNTFLTNKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091728 ID=g.barbadense_cottongen_reftransV1_0091728; Name=g.barbadense_cottongen_reftransV1_0091728; organism=Gossypium barbadense; type=contig; length=3467bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|