g.barbadense_cottongen_reftransV1_0091724, g.barbadense_cottongen_reftransV1_0091724 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter IolT OS=Bacillus subtilis (strain 168) GN=iolT PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.815e-30 Identity = 93/326 (28.53%), Postives = 157/326 (48.16%), Query Frame = 1 Query: 493 ILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGW--------WRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSD----RGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA---NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVS 1425 IL++ LFGY GV+N L M + + EGLV S+ L GA +G++F G ++D GRR+ + A+ I A ++ M++ R +G +G S Y+ E+SP RG + + L ++ + F AI G WR + PA L M ESP WL +GR DA +K+ K A AEL + + + D+ + F +L R++VFIG + +QQ++G+N++ Y+ + + +G +E+A N+ G+ ++L +FV + L+ R+GR+ +L+ G + Sbjct: 15 ILVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNE----LMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDE---KRAAAELQEIEFAFKKEDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTT 333
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=itr2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.886e-30 Identity = 98/335 (29.25%), Postives = 172/335 (51.34%), Query Frame = 1 Query: 499 LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPM-IIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKA----IEGWWRICFWASVAPA--AILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSA-----MAELSKSDRGDEADTFKFSELLYG--------HHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSE-SANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFC 1440 +A +S LFGY GV++ L + DLG + + L+ S A + + SG +AD VGR+R L LCA + +IG+ + AA++++ M++GR VG G+G+ S + +Y+TE++PA +RG I + + G I + A + WRI F APA +++LF ++ ESP +L + ++ P K A ++ + + + D + KF + +R+ +FIG L QQ SG NA+ YFS+ +F++ G + S ++ VG N + + VA + +DR+GR+ +L+ + + M++ + C Sbjct: 87 VAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLL-LCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGR----LVIIYVVFITGGQLIAYSLNAAFEHVHQGWRIMFGIGAAPALGQLISLF--WTPESPRYLLRHNHVEKVYKILSRI--HPEAKPAEIAYKVSLIQEGVKVDFPEGNKFQHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNSISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALC 412
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITR2 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.089e-29 Identity = 99/343 (28.86%), Postives = 165/343 (48.10%), Query Frame = 1 Query: 487 PYIL----LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLG-GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKA----IEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKS----------AMAELSKSDRGDEADTFKFSELLYGHHR-----KVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA-NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFC 1440 P+I+ +A++S F+FGY G ++ L S++ DL T E +++ GA + S+ +G AD GRR L L +IGA + A W M GRL +G G+GIGS ++ L+++E++P +RG + L L G I + A ++ WRI S+ P + F F ++P + +G A+ +L YV + ++ L++S G T KF ++ H + + IG L A+QQ +G N++ YFS T+FET G + SA ++ V N + + +A +D++GR+ +L+ GM C Sbjct: 107 PFIITLTFVASISGFMFGYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGR----LTVINSLWLTGGQLIAYGCGAGLNHVKNGWRILVGLSLIPTVLQFSFFCFLPDTPRYYVMKGDLKRAKM----VLKRSYVNTEDEIIDQKVEELSSLNQSIPGKNPIT-KFWNMVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVIC 440
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: HGT1_KLULA (High-affinity glucose transporter OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HGT1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.582e-29 Identity = 87/329 (26.44%), Postives = 160/329 (48.63%), Query Frame = 1 Query: 478 RSFPYI-------LLAALSSFLFGYHLGVVNETL-ESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEG--WWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDE------ADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES---ANMCVGIANLLGSFVAMILMDRLGRK-VLLIG 1404 + FP++ +A +S +FG+ + ++ + + D + D++ G + ++ GG+F+GSL S +D GR+ +L +CA IIGA + AA+ +++GR+ G G+G GS+ A +Y +E+SP +RGT Q + +G+M +IG+ I+G +RI + + P IL + + F ESP WL R + ++ V + + ++ A F + +L +G + QQL G+N + Y+ +F AG + A+ + N++ + A+ L+D+ GR+ VL+IG Sbjct: 20 KKFPHVYNIYVIGFIACISGLMFGFDIASMSSMIGTDVYKDYFSNPDSLTYGGITASMAGGSFLGSLISPNFSDAFGRKVSLHICAALWIIGAILQCAAQDQAMLIVGRVISGMGIGFGSSAAPVYCSEISPPKIRGTISGLFQFSVTVGIMVLFYIGYGCHFIDGAAAFRITWGLQMVPGLILMVGVFFIPESPRWLANHDRWEETSLIVANIVANGDVNNEQVRFQLEEIKEQVIIDSAAKNFGYKDLFRKKTLPKTIVGVSAQMWQQLCGMNVMMYYIVYIFNMAGYTGNTNLVASSIQYVLNVVMTIPALFLIDKFGRRPVLIIG 348
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.855e-29 Identity = 106/350 (30.29%), Postives = 169/350 (48.29%), Query Frame = 1 Query: 478 RSFPYIL----LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLG-LMGSL-FIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRA------------ADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHH--RKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES----ANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFCWSFTV 1455 R+ Y++ A+L++ L GY +GV++ + + DL + E L+ S + F GSL G +D +GR+ + L AL GA++ A A S +++GR G G+G+G +A +Y+ E+SP RG SF +I LG L+G + F ++ WRI + P+ + + ESP WL +GR D EAE E+L A +L+ + D + ELL RK++ +G + QQ++GI+A Y+S + + AG+ E+ A + VG+ + A L+D +GRK LL S GM + FC SFT+ Sbjct: 50 RTRKYVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKIT-EVQTEVLIGSLSIISLF-GSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWLVMKGRVDSAREVLMKTNERDDEAE-ERL--------AEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGM-TLCLFCLSFTL 387
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2MK36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1) HSP 1 Score: 529.25 bits (1362), Expect = 3.950e-175 Identity = 265/357 (74.23%), Postives = 301/357 (84.31%), Query Frame = 1 Query: 358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422 H A+ Y+R Y+ + VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEG G F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK EGWWRICFW S PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+ Sbjct: 5 HADAYSMYKRGTRDYINAYDKEP--VRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEG--------GGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 351
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2QP23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1) HSP 1 Score: 528.865 bits (1361), Expect = 1.533e-174 Identity = 261/334 (78.14%), Postives = 293/334 (87.72%), Query Frame = 1 Query: 421 F*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422 F VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEG G F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK EGWWRICFW S PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+ Sbjct: 14 FYVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEG--------GGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 339 HSP 2 Score: 68.5514 bits (166), Expect = 1.095e-8 Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 2 Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHW 2515 VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW Sbjct: 370 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHW 406
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2MK33_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1) HSP 1 Score: 530.02 bits (1364), Expect = 3.314e-174 Identity = 261/334 (78.14%), Postives = 293/334 (87.72%), Query Frame = 1 Query: 421 F*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422 F VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEG G F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK EGWWRICFW S PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+ Sbjct: 14 FYVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEG--------GGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 339 HSP 2 Score: 166.392 bits (420), Expect = 2.611e-40 Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 2 Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695 VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF FCL+AV+F+K+NVLETKGKSLQEIEI LLP E Sbjct: 370 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 466
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2MK39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1) HSP 1 Score: 530.406 bits (1365), Expect = 4.721e-174 Identity = 265/357 (74.23%), Postives = 301/357 (84.31%), Query Frame = 1 Query: 358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422 H A+ Y+R Y+ + VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEG G F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK EGWWRICFW S PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+ Sbjct: 5 HADAYSMYKRGTRDYINAYDKEPGSVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEG--------GGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 353 HSP 2 Score: 167.162 bits (422), Expect = 2.258e-40 Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 2 Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695 VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF FCL+AV+F+K+NVLETKGKSLQEIEI LLP E Sbjct: 384 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 480
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2NX75_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 9.127e-174 Identity = 265/357 (74.23%), Postives = 301/357 (84.31%), Query Frame = 1 Query: 358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422 H A+ Y+R Y+ + VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEG G F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK EGWWRICFW S PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+ Sbjct: 5 HADAYSMYKRGTRDYINAYDKEP--VRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEG--------GGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 351 HSP 2 Score: 166.777 bits (421), Expect = 2.319e-40 Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 2 Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695 VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF FCL+AV+F+K+NVLETKGKSLQEIEI LLP E Sbjct: 382 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 478 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091724 ID=g.barbadense_cottongen_reftransV1_0091724; Name=g.barbadense_cottongen_reftransV1_0091724; organism=Gossypium barbadense; type=contig; length=3151bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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