g.barbadense_cottongen_reftransV1_0091724, g.barbadense_cottongen_reftransV1_0091724 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0091724
Unique Name	g.barbadense_cottongen_reftransV1_0091724
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3151

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter IolT OS=Bacillus subtilis (strain 168) GN=iolT PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.815e-30
Identity = 93/326 (28.53%), Postives = 157/326 (48.16%), Query Frame = 1

Query:  493 ILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGW--------WRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSD----RGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA---NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVS 1425
            IL++     LFGY  GV+N  L  M      + +   EGLV S+ L GA +G++F G ++D  GRR+ +   A+   I       A ++  M++ R  +G  +G  S     Y+ E+SP   RG   +  +    L ++    + F   AI G         WR     +  PA  L   M    ESP WL  +GR  DA    +K+      K A AEL + +    + D+ +   F +L     R++VFIG  +  +QQ++G+N++ Y+ + +   +G  +E+A   N+  G+ ++L +FV + L+ R+GR+ +L+    G  +
Sbjct:   15 ILVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNE----LMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDE---KRAAAELQEIEFAFKKEDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTT 333

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=itr2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.886e-30
Identity = 98/335 (29.25%), Postives = 172/335 (51.34%), Query Frame = 1

Query:  499 LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPM-IIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKA----IEGWWRICFWASVAPA--AILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSA-----MAELSKSDRGDEADTFKFSELLYG--------HHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSE-SANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFC 1440
            +A +S  LFGY  GV++  L  +  DLG    +  + L+ S     A + +  SG +AD VGR+R L LCA  + +IG+ + AA++++  M++GR  VG G+G+ S +  +Y+TE++PA +RG       I   + + G   I +   A    +   WRI F    APA   +++LF  ++ ESP +L +            ++   P  K A     ++ + +  + D  +  KF    +          +R+ +FIG  L   QQ SG NA+ YFS+ +F++ G  +  S ++ VG  N + + VA + +DR+GR+ +L+ + + M++  + C
Sbjct:   87 VAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLL-LCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGR----LVIIYVVFITGGQLIAYSLNAAFEHVHQGWRIMFGIGAAPALGQLISLF--WTPESPRYLLRHNHVEKVYKILSRI--HPEAKPAEIAYKVSLIQEGVKVDFPEGNKFQHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNSISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALC 412

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITR2 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.089e-29
Identity = 99/343 (28.86%), Postives = 165/343 (48.10%), Query Frame = 1

Query:  487 PYIL----LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLG-GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKA----IEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKS----------AMAELSKSDRGDEADTFKFSELLYGHHR-----KVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA-NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFC 1440
            P+I+    +A++S F+FGY  G ++  L S++ DL     T  E  +++     GA + S+ +G  AD  GRR  L    L  +IGA +   A   W M  GRL +G G+GIGS ++ L+++E++P  +RG       +   L L G   I +   A    ++  WRI    S+ P  +   F  F  ++P +   +G    A+     +L   YV +           ++ L++S  G    T KF  ++   H      + + IG  L A+QQ +G N++ YFS T+FET G  + SA ++ V   N + + +A   +D++GR+ +L+    GM      C
Sbjct:  107 PFIITLTFVASISGFMFGYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGR----LTVINSLWLTGGQLIAYGCGAGLNHVKNGWRILVGLSLIPTVLQFSFFCFLPDTPRYYVMKGDLKRAKM----VLKRSYVNTEDEIIDQKVEELSSLNQSIPGKNPIT-KFWNMVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVIC 440

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: HGT1_KLULA (High-affinity glucose transporter OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HGT1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.582e-29
Identity = 87/329 (26.44%), Postives = 160/329 (48.63%), Query Frame = 1

Query:  478 RSFPYI-------LLAALSSFLFGYHLGVVNETL-ESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEG--WWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDE------ADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES---ANMCVGIANLLGSFVAMILMDRLGRK-VLLIG 1404
            + FP++        +A +S  +FG+ +  ++  +   +  D   + D++  G + ++  GG+F+GSL S   +D  GR+ +L +CA   IIGA +  AA+    +++GR+  G G+G GS+ A +Y +E+SP  +RGT     Q +  +G+M   +IG+    I+G   +RI +   + P  IL + + F  ESP WL    R  +       ++    V +        +  ++      A  F + +L          +G +    QQL G+N + Y+   +F  AG    +   A+    + N++ +  A+ L+D+ GR+ VL+IG
Sbjct:   20 KKFPHVYNIYVIGFIACISGLMFGFDIASMSSMIGTDVYKDYFSNPDSLTYGGITASMAGGSFLGSLISPNFSDAFGRKVSLHICAALWIIGAILQCAAQDQAMLIVGRVISGMGIGFGSSAAPVYCSEISPPKIRGTISGLFQFSVTVGIMVLFYIGYGCHFIDGAAAFRITWGLQMVPGLILMVGVFFIPESPRWLANHDRWEETSLIVANIVANGDVNNEQVRFQLEEIKEQVIIDSAAKNFGYKDLFRKKTLPKTIVGVSAQMWQQLCGMNVMMYYIVYIFNMAGYTGNTNLVASSIQYVLNVVMTIPALFLIDKFGRRPVLIIG 348

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.855e-29
Identity = 106/350 (30.29%), Postives = 169/350 (48.29%), Query Frame = 1

Query:  478 RSFPYIL----LAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLG-LMGSL-FIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRA------------ADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHH--RKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES----ANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFCWSFTV 1455
            R+  Y++     A+L++ L GY +GV++  +  +  DL    +   E L+ S  +   F GSL  G  +D +GR+  + L AL    GA++ A A S   +++GR   G G+G+G  +A +Y+ E+SP   RG   SF +I   LG L+G +    F   ++   WRI     + P+  +   +    ESP WL  +GR              D EAE E+L        A  +L+ +      D   + ELL      RK++ +G  +   QQ++GI+A  Y+S  + + AG+  E+    A + VG+   +    A  L+D +GRK LL  S  GM +   FC SFT+
Sbjct:   50 RTRKYVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKIT-EVQTEVLIGSLSIISLF-GSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWLVMKGRVDSAREVLMKTNERDDEAE-ERL--------AEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGM-TLCLFCLSFTL 387

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2T424_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 330/346 (95.38%), Postives = 338/346 (97.69%), Query Frame = 1

Query:  430 RLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFCWSFTVWLMP 1467
            R L+GVGKDIG PSWKRS  ++L+A LSSFL+GYHLGVVNETLES+S DLGFHG+TMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIG AVAALYVTEVSPAYVRGT+GSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFCWSFTVWLMP
Sbjct:   34 RSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVSKKSFCWSFTVWLMP 379

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2VJH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 315/331 (95.17%), Postives = 323/331 (97.58%), Query Frame = 1

Query:  430 RLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            R L+GVGKDIG PSWKRS  ++L+A LSSFL+GYHLGVVNETLES+S DLGFHG+TMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIG AVAALYVTEVSPAYVRGT+GSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV
Sbjct:   34 RSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 364

HSP 2 Score: 193.741 bits (491), Expect = 2.664e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 2

Query: 2402 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:  394 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 491

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2RIC7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 315/331 (95.17%), Postives = 323/331 (97.58%), Query Frame = 1

Query:  430 RLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            R L+GVGKDIG PSWKRS  ++L+A LSSFL+GYHLGVVNETLES+S DLGFHG+TMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIG AVAALYVTEVSPAYVRGT+GSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV
Sbjct:   34 RSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 364

HSP 2 Score: 193.741 bits (491), Expect = 2.422e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 2

Query: 2402 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:  394 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 491

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2ULA2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G135300 PE=3 SV=1)

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 289/331 (87.31%), Postives = 308/331 (93.05%), Query Frame = 1

Query:  427 VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGM 1419
            VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSG IADGVGRRRA QLCALP+IIG+SMSA AK+LW MLLGRLFVGTGMGIG  VAALYV EVSPAYVRGT+GS +Q+AT LGLMG+LFIGFPAK IEGWWR+CFWASVAPAA+L +FMEFSVESPHWLFKRGR A+AEAEFEKLLGGPYVK AMAELSKS RGDEADT K SEL YG HRKVVF+GS+LFALQQLSGINAVFYFSSTVF++AGVPSESAN+CVGIANLLGS  A++ MD+LGRK LLI SFSGM
Sbjct:   54 VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGSIADGVGRRRAFQLCALPLIIGSSMSATAKNLWGMLLGRLFVGTGMGIGPPVAALYVAEVSPAYVRGTYGSCSQLATCLGLMGALFIGFPAKQIEGWWRMCFWASVAPAALLTVFMEFSVESPHWLFKRGRGAEAEAEFEKLLGGPYVKGAMAELSKSQRGDEADTVKLSELFYGRHRKVVFMGSSLFALQQLSGINAVFYFSSTVFKSAGVPSESANICVGIANLLGSLFALVSMDKLGRKALLIASFSGM 384

HSP 2 Score: 108.997 bits (271), Expect = 8.315e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 2

Query:  263 VSQLTSESFAFRSGESVYNSVEMRGRHVDSYSMYKRGTRDHVINTYNYDKEQV 421
            +  LTSESFAFRSGESVYNSVEMRGRHVDSYSMYKRGTRDHVINTY+YDKEQV
Sbjct:    2 LEMLTSESFAFRSGESVYNSVEMRGRHVDSYSMYKRGTRDHVINTYDYDKEQV 54

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BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A061GIC7_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_028773 PE=3 SV=1)

HSP 1 Score: 589.341 bits (1518), Expect = 0.000e+0
Identity = 290/356 (81.46%), Postives = 314/356 (88.20%), Query Frame = 1

Query:  358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGM 1419
            H+ A+  Y+R    Y+    +     RLL+G GKDIGNPSW RS P+IL+A LSS LFGYHLGVVNETLESMSHDLGFHG+TMAEGLVVSTCLGGAFVGSLFSG IADGVGRRRA QLCALPMIIG+SMSA AK+LW MLLGRLFVG+GMGIG  VAALYVTEVSPAYVRGT+GS TQIAT LGLMG+LFIG PAK  EGWWRICFW S  PAA+LALFMEFS ESP WLFKRGR ADAEAEFEKLLGGPYVK AMAELSKSDRGDEADT +FSELLYG HRKV+FIGSTLFALQQLSGINAVFYFSSTVF+ AGVPSESAN+CVGIANL+GSFVA++LMD+LGRK+LLIGSFSGM
Sbjct:   52 HLDAYSMYKRGSKDYINAHDKEQGSARLLNGAGKDIGNPSWNRSLPHILVATLSSLLFGYHLGVVNETLESMSHDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGSIADGVGRRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGSGMGIGPPVAALYVTEVSPAYVRGTYGSCTQIATCLGLMGALFIGLPAKETEGWWRICFWVSAVPAAMLALFMEFSAESPQWLFKRGRGADAEAEFEKLLGGPYVKGAMAELSKSDRGDEADTVRFSELLYGRHRKVIFIGSTLFALQQLSGINAVFYFSSTVFKNAGVPSESANICVGIANLIGSFVALLLMDKLGRKLLLIGSFSGM 407

HSP 2 Score: 169.859 bits (429), Expect = 5.259e-41
Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 2

Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            VL FA+GAGPVP +LLSEMFPGR+RA A+S+CMA HW++NFFVGL FLRLLEQIGPLVLN+IFG FCLLAV+F+KKNVLETKGKSLQEIEIA LP E
Sbjct:  439 VLTFAMGAGPVPGLLLSEMFPGRIRAKAMSICMAVHWVINFFVGLLFLRLLEQIGPLVLNTIFGTFCLLAVIFVKKNVLETKGKSLQEIEIAFLPPE 535

HSP 3 Score: 66.6254 bits (161), Expect = 6.153e-8
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 2

Query:  269 QLTSESFAFRSGESVYNSVEMRGRHVDSYSMYKRGTRDHVINTYNYDKEQ 418
             LT+ESF F SG+  YN++ MRGRH+D+YSMYKRG++D+ IN   +DKEQ
Sbjct:   28 MLTAESFVFSSGDGAYNNMAMRGRHLDAYSMYKRGSKDY-INA--HDKEQ 74

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A061GAC8_THECC (Major facilitator superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_028773 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 290/356 (81.46%), Postives = 314/356 (88.20%), Query Frame = 1

Query:  358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGM 1419
            H+ A+  Y+R    Y+    +     RLL+G GKDIGNPSW RS P+IL+A LSS LFGYHLGVVNETLESMSHDLGFHG+TMAEGLVVSTCLGGAFVGSLFSG IADGVGRRRA QLCALPMIIG+SMSA AK+LW MLLGRLFVG+GMGIG  VAALYVTEVSPAYVRGT+GS TQIAT LGLMG+LFIG PAK  EGWWRICFW S  PAA+LALFMEFS ESP WLFKRGR ADAEAEFEKLLGGPYVK AMAELSKSDRGDEADT +FSELLYG HRKV+FIGSTLFALQQLSGINAVFYFSSTVF+ AGVPSESAN+CVGIANL+GSFVA++LMD+LGRK+LLIGSFSGM
Sbjct:    7 HLDAYSMYKRGSKDYINAHDKEQGSARLLNGAGKDIGNPSWNRSLPHILVATLSSLLFGYHLGVVNETLESMSHDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGSIADGVGRRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGSGMGIGPPVAALYVTEVSPAYVRGTYGSCTQIATCLGLMGALFIGLPAKETEGWWRICFWVSAVPAAMLALFMEFSAESPQWLFKRGRGADAEAEFEKLLGGPYVKGAMAELSKSDRGDEADTVRFSELLYGRHRKVIFIGSTLFALQQLSGINAVFYFSSTVFKNAGVPSESANICVGIANLIGSFVALLLMDKLGRKLLLIGSFSGM 362

HSP 2 Score: 169.474 bits (428), Expect = 3.643e-41
Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 2

Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            VL FA+GAGPVP +LLSEMFPGR+RA A+S+CMA HW++NFFVGL FLRLLEQIGPLVLN+IFG FCLLAV+F+KKNVLETKGKSLQEIEIA LP E
Sbjct:  394 VLTFAMGAGPVPGLLLSEMFPGRIRAKAMSICMAVHWVINFFVGLLFLRLLEQIGPLVLNTIFGTFCLLAVIFVKKNVLETKGKSLQEIEIAFLPPE 490

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2UQH4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0
Identity = 293/331 (88.52%), Postives = 301/331 (90.94%), Query Frame = 1

Query:  430 RLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            R L+GVGKDIG PSWKRS  ++L+A LSSFL+GYHLGVVNETLES+S DLGFHG+TMAE                      DGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIG AVAALYVTEVSPAYVRGT+GSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV
Sbjct:   34 RSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAE----------------------DGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 342

HSP 2 Score: 193.741 bits (491), Expect = 1.432e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 2

Query: 2402 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:  372 SVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 469

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2MK31_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 272/357 (76.19%), Postives = 308/357 (86.27%), Query Frame = 1

Query:  358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            H  A+  Y+R    Y+    +    VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G  +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+
Sbjct:   26 HADAYSMYKRGTRDYINAYDKEPGSVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 382

HSP 2 Score: 166.777 bits (421), Expect = 3.811e-40
Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 2

Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:  413 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 509

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2QGG2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 272/357 (76.19%), Postives = 308/357 (86.27%), Query Frame = 1

Query:  358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            H  A+  Y+R    Y+    +    VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G  +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+
Sbjct:    5 HADAYSMYKRGTRDYINAYDKEPGSVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 361

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Match: A0A0D2RHR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0
Identity = 272/357 (76.19%), Postives = 308/357 (86.27%), Query Frame = 1

Query:  358 HVQAW--YQRPRNQYL*L*QRTSF*VRLLSGVGKDIGNPSWKRSFPYILLAALSSFLFGYHLGVVNETLESMSHDLGFHGDTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGSAVAALYVTEVSPAYVRGTHGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV 1422
            H  A+  Y+R    Y+    +    VR L+GV K+IGNPSWKRSF YIL+A+L+SFL+GYHLGV+NETLES+S+DL F+G+TMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+G  +A LYVTEVSPAYVRGT+GSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+
Sbjct:    5 HADAYSMYKRGTRDYINAYDKEPGSVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMI 361

HSP 2 Score: 166.777 bits (421), Expect = 3.281e-40
Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 2

Query: 2405 VLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 2695
            VLAF++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:  392 VLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 488

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
IOLT_BACSU	4.815e-30	28.53	Major myo-inositol transporter IolT OS=Bacillus su...	[more]
ITR2_SCHPO	8.886e-30	29.25	Myo-inositol transporter 2 OS=Schizosaccharomyces ...	[more]
ITR2_YEAST	1.089e-29	28.86	Myo-inositol transporter 2 OS=Saccharomyces cerevi...	[more]
HGT1_KLULA	1.582e-29	26.44	High-affinity glucose transporter OS=Kluyveromyces...	[more]
PLT4_ARATH	1.855e-29	30.29	Probable polyol transporter 4 OS=Arabidopsis thali...	[more]

Pages

BLAST of g.barbadense_cottongen_reftransV1_0091724 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2T424_GOSRA	0.000e+0	95.38	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2VJH7_GOSRA	2.664e-49	95.17	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RIC7_GOSRA	2.422e-49	95.17	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2ULA2_GOSRA	8.315e-22	87.31	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GIC7_THECC	5.259e-41	81.46	Major facilitator superfamily protein isoform 1 OS...	[more]
A0A061GAC8_THECC	3.643e-41	81.46	Major facilitator superfamily protein isoform 2 OS...	[more]
A0A0D2UQH4_GOSRA	1.432e-49	88.52	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2MK31_GOSRA	3.811e-40	76.19	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2QGG2_GOSRA	0.000e+0	76.19	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RHR3_GOSRA	3.281e-40	76.19	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003663	Sugar/inositol transporter	PRINTS	PR00171	SUGRTRNSPORT	coord: 28..38 score: 45.76 coord: 113..132 score: 30.62 coord: 268..278 score: 65.38
None	No IPR available	GENE3D	1.20.1250.20		coord: 19..203 e-value: 1.4E-22 score: 79.5 coord: 255..330 e-value: 4.9E-6 score: 25.4
None	No IPR available	PANTHER	PTHR23503	FAMILY NOT NAMED	coord: 6..329
None	No IPR available	PANTHER	PTHR23503:SF19	PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED	coord: 6..329
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..90
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 282..292
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 314..319
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..135
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 147..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..39
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 198..256
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 112..116
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 40..58
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 136..146
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 320..344
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 293..313
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..197
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 169..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 59..79
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 345..345
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..111
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 257..281
None	No IPR available	TMHMM	TMhelix		coord: 257..279
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 57..79
None	No IPR available	TMHMM	TMhelix		coord: 112..134
None	No IPR available	TMHMM	TMhelix		coord: 173..195
None	No IPR available	TMHMM	TMhelix		coord: 149..166
None	No IPR available	TMHMM	TMhelix		coord: 291..313
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 22..330 e-value: 2.1E-64 score: 217.9
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 76..93
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 309..325
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 20..345 score: 33.22
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 11..330

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0091724 ID=g.barbadense_cottongen_reftransV1_0091724; Name=g.barbadense_cottongen_reftransV1_0091724; organism=Gossypium barbadense; type=contig; length=3151bp
GATCTTCCCTCCCTCCTCACTTCACTCCCTCCTTATGCACGGGTGTTGGT
CTCTTTCTTCAAATTTAAACCCCCAAAAATCCAGTCGCCTTCCATCCCGG
CACATTTTAGTTCTGTTTTCCATTTTTGGTTTCTCTCCTTTACCTCATTT
TTAAGTTCTCAATCATTTTCTTTTTAAATTCAAGCAATCATAAAAGGAAA
AAAAAAAAGCCATTGCCGTAGCATTTCAAAATTCAAAGCTAATAGCGAAT
GTTCTCATTTCTGTTTCACAGTTAACATCTGAGAGTTTTGCGTTCCGTTC
TGGGGAGAGTGTTTATAATAGCGTCGAAATGCGGGGACGACATGTCGATT
CTTATTCCATGTACAAGCGTGGTACCAGAGACCACGTAATCAATACCTAT
AACTATGACAAAGAACAAGTTTTTAAGTACGATTGCTGAGTGGAGTGGGG
AAAGATATTGGAAACCCGTCTTGGAAACGATCATTCCCGTATATACTCCT
GGCAGCCTTATCTTCCTTCTTATTTGGTTACCATCTTGGAGTAGTTAATG
AAACTCTAGAGAGTATGTCACATGACCTTGGTTTTCATGGGGATACCATG
GCTGAAGGTCTGGTTGTAAGTACATGTTTAGGGGGTGCCTTTGTTGGATC
GCTGTTCAGTGGTTTGATTGCAGACGGAGTTGGGCGTCGCAGGGCACTCC
AGCTATGTGCTTTGCCTATGATAATTGGGGCTTCAATGAGTGCAGCAGCA
AAAAGCCTTTGGGCCATGCTTCTGGGGAGGTTATTTGTGGGGACTGGAAT
GGGTATTGGCTCAGCTGTGGCAGCTCTTTATGTGACAGAGGTTTCTCCAG
CTTATGTAAGAGGTACACATGGAAGCTTCACTCAAATTGCAACAGGCCTA
GGATTGATGGGCTCTCTATTTATTGGATTCCCTGCTAAGGCAATCGAGGG
TTGGTGGCGCATATGTTTCTGGGCATCTGTTGCTCCTGCTGCTATACTTG
CTCTTTTTATGGAGTTTTCTGTAGAGAGTCCCCATTGGCTTTTTAAGAGA
GGAAGAGCTGCTGATGCTGAAGCTGAGTTTGAAAAACTTTTGGGAGGACC
ATATGTCAAAAGTGCAATGGCTGAATTGTCAAAGTCAGACAGAGGGGATG
AGGCAGATACATTCAAGTTCTCAGAGCTACTTTATGGCCATCATCGTAAA
GTTGTTTTCATTGGGTCTACCCTTTTTGCTTTACAACAGCTCTCTGGTAT
AAATGCTGTTTTCTATTTCTCGTCAACTGTCTTTGAAACTGCTGGCGTAC
CTTCAGAGTCTGCAAACATGTGTGTGGGAATTGCCAATTTGTTAGGATCA
TTTGTTGCAATGATTTTGATGGATAGACTGGGAAGGAAGGTACTTCTCAT
TGGAAGCTTTTCAGGCATGGTAAGTAAGAAAAGTTTTTGCTGGTCTTTTA
CTGTTTGGCTCATGCCATGAGCATATGTATAATATTGAAGTTCCTAATAT
GATTCTGTTCTGCAGTTATGTTTGGGGTTTGTATTTGGTAGCTAACTGTC
AACTCCTATAAGCGAAAGTATATGCAGACTTGGTTGGACTTTCAAATCTG
TAACTTTTCTGGCAATTATAAGAGCAGATAGTTCTTGTTCTGCAAGATTG
TTCTATAGTATAGACTACATTAATGCAGTTTGCAGTTGCTGATGACCACG
AGAGGATAAGAATTACAAATTCATTTAATTTAGGGCCAGTGATAGTGTAA
GAGATTCCCAGAGGATATTTGTATAGTTGATTGTGCTGTTTGTGTGGTAC
ACTCTCTGTTAGATTTGAACCTAACAGGTTTTGAATTGTGCTATGTTGTG
GTACATATATTTCTGATTGTTAGACTTCAACTTAACAACTTTTGTCATGT
TCAATACAATTTTGACACCAATCAAACTCCAATTTATGCTTTGTGTTCCA
GGTAGTGGCAATGTTTCTTCAGATAACTTCAGCTACTTCCTTAGTTTCAA
GAAGTAGTGGAGTTTATCTCTCTGTTGGAGGCATGCTTTTGTAAGTAGTT
AATCCTTTGAATATCAAAATGTTTATTTTCGTAGTGGAGATAAGCTTATT
AAACCTGTGTGGCTTAGTGTTACTTTACATATGTAGGATTACTGCTCCAT
CCATCATCAAGATGATTTATATCTGGCATCGTTGAACACAATATAATTTG
CTACCTGAGAAATATGAAGAGCATGAATGCAATATGTCTAGTACATTAAA
TTAATTTTTAATTCAGCGGGGTCCCGTAGACCGTGTTTAAGGTGTCCTTA
TTACATAATTTATGAAAGTTAAATAAAAATCTATATTTAGCAACTTCAAT
TTGCAGTGTGGCATTCTCTCAACCAAAAATTTAATGATGTAATAATGCAG
GTCTGTCTTGGCCTTCGCTATTGGAGCTGGACCAGTCCCTAGTATCCTAC
TATCAGAAATGTTTCCTGGTCGGGTTAGGGCAAATGCAGTGTCAGTTTGC
ATGGCTTTCCATTGGATTGTAAATTTCTTTGTCGGGCTGTTCTTTTTGCG
GTTACTGGAACAGATTGGACCGTTAGTCCTGAATTCGATTTTCGGTGCCT
TTTGTCTGCTGGCAGTACTTTTTATAAAGAAAAATGTGTTGGAAACAAAA
GGAAAATCACTTCAAGAGATTGAAATTGCACTTCTTCCATCAGAATAGAG
GGCGCTTCGGGATATAAGTATTTCATTGCACCAATATCTCCTGCCGCTAA
TCCTGCCGGCTTATCAATCTGAAAGATGCAGACCTTGGTAAATGATGTCA
TAGATGGATCATAGCGAAAAGAACACATTCATCAGGTGCTCACTCTCCTA
GCCCATGTAACTCTTAAGAGAAATTATTTTATTGTTTCCTTGAATACTGA
ATTACTACATTTCCTGGCGGAGAAATTAATATAGCATATACGGGGGATTC
ACTTTGGATGATATGTTTTTAACTTCTAATCAGGATGGAACGTCACATTT
TGAGTTGAGCACTCCGATATTTTTGTTGTTAATGAATTGCATGGATGGAC
AATGAATTCTGAGAAATTAACTACAGTGAAACTGTCTAAAAATTCCAGAT
CGCTTCAACTTCAATTCAAGGTAGTCAATATAGTAATGATCCGTTTTATC
A

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003663	Sugar/inositol_transpt
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral to membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0022891	substrate-specific transmembrane transporter activity
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Search form

g.barbadense_cottongen_reftransV1_0091724, g.barbadense_cottongen_reftransV1_0091724 (contig) Gossypium barbadense

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