g.barbadense_cottongen_reftransV1_0091715, g.barbadense_cottongen_reftransV1_0091715 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0091715
Unique Nameg.barbadense_cottongen_reftransV1_0091715
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3330
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.336e-20
Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ----LVASSIDSI--------VNGS---------TSGNGKEPSVAAALAVQCGNFGSK----------------IESSI-----DPSHMTFGGM-KTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +       A+S+ S+         +GS         ++ +  +PS  +  ++   +  S                 +++S+      PS      + K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.793e-20
Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ----LVASSIDSIVNG------------------STSGNGKEPSVAAALAVQCGNFGSKIES-SID-------------------PSHMTFGGM-KTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +       A+S+ S+                     STS + +   V+    +      S+++S S+D                   PS      + K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.634e-19
Identity = 65/201 (32.34%), Postives = 96/201 (47.76%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ-LVASSIDSIVNGSTS-----GNGKEPSVAAALAVQCGNF----------------GSKIES-SIDPS--------------------HMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +   ++    S+ + S S      +G  P   +AL     +                  S+++S S+D +                      +    K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.698e-18
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 2
Query: 2273 RQASEG-PILCVNNCGFFGSAATMNMCSKCHK--------AMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKL 2746
            +QAS G P+LC + CGF+G+ AT++MCS C++         M      +   AS+        TS +   PS            G+   S  +P   T   ++ K   NRC +C K+VGL GF CRCG  +C  HRY +KH C FD++ A+RDAIA+ANP+++ EKL
Sbjct:  195 QQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVN--------GAAFSSKNNPEPATV--VEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.782e-18
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 2
Query: 2291 PILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            P LC+  CGFF ++ T N+CSKC+    LK E A+ +A+                            N  +K    +     T  G K       C AC K+VGL GF+CRCG+LF A+HRY ++H CP DY++AA D +AK NPVV+ +KL ++
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDF-LKDESARYLATF---------------------------NVNTKAAEEVTAQEATVLGSK-----GGC-ACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: M1AEJ2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008152 PE=4 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.210e-60
Identity = 118/172 (68.60%), Postives = 135/172 (78.49%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+   ETG QA EGPILC+NNCGFFGSAATMNMCSKCHK MILKQEQA+  A+SI++IVNG++S NGKEP    A+ VQ G+   K+   E+S D S      +K KEGP RC  C KRVGLTGFNC+CGNLFCAAHRYSDKH+CPFDY+ A RDAIAKANPVV AEKL+KI
Sbjct:    1 MESSKETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDMILKQEQAKFAATSIENIVNGNSSSNGKEPIATGAINVQPGSADLKVISTEASSDLSSGPSSEVKPKEGPTRCTTCRKRVGLTGFNCKCGNLFCAAHRYSDKHECPFDYKNAGRDAIAKANPVVVAEKLNKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: C4NAL7_SOLPN (Stress-associated protein 5 OS=Solanum pennellii GN=SAP5 PE=4 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.931e-60
Identity = 116/172 (67.44%), Postives = 133/172 (77.33%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+   ETG QA EGPILC+NNCGFFGSAATMNMCSKCHK MILKQEQA+  A+SI++IVNG++S NGKE     A+ VQ G+   K+   E+  D S      +K KEGP RC  C KRVGLTGFNC+CGNLFCAAHRYSDKH+CPFDY+ A RDAIAKANPVV AEKL+KI
Sbjct:    1 MESSKETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDMILKQEQAKFAATSIENIVNGNSSSNGKEAIEIGAINVQPGSADLKVIYTEAYYDLSSGPSSEVKPKEGPTRCTTCRKRVGLTGFNCKCGNLFCAAHRYSDKHECPFDYKNAGRDAIAKANPVVVAEKLNKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: B9GW97_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0003s20450g PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.667e-59
Identity = 119/176 (67.61%), Postives = 134/176 (76.14%), Query Frame = 2
Query: 2243 EKMDPLDETGRQAS-EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGG----MKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            +KMD  DETG QA  E PILC+NNCGFFGSAATMNMCSKCHK M+LKQEQ +L ASSI SIVNGS S N  EP +A  + VQ      K   ++ PS  +  G     K KEGP+RC +C KRVGLTGF CRCG+LFCA+HRYSDKHDCPFDYR AAR+AIAKANPVV+AEKLDKI
Sbjct:    5 QKMD-RDETGCQAPPERPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQTKLAASSIGSIVNGSASSNVNEPVIADTINVQINAVEPKT-ITVQPSCASVSGERVEAKPKEGPSRCTSCKKRVGLTGFKCRCGDLFCASHRYSDKHDCPFDYRTAAREAIAKANPVVKAEKLDKI 178          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A9P8S9_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0001s05600g PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.033e-59
Identity = 119/170 (70.00%), Postives = 132/170 (77.65%), Query Frame = 2
Query: 2261 DETGRQAS-EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGG----MKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            DETG QA  EGPILC NNCGFFGSAATMNMCSKCHK M+LKQEQA L ASSI SIVNGS+S N  EP +A  + VQ  N       ++ PS  +  G     K KEGPNRC +C KRVGLTGF CRCG+LFCA+HRYSDKHDCPFDYR+AAR+AIAKANPVV+AEKLDKI
Sbjct:    4 DETGCQAPPEGPILCTNNCGFFGSAATMNMCSKCHKGMLLKQEQANLAASSIGSIVNGSSSSNVFEPVIADIIDVQ-NNAVEPKTITVQPSCASGSGERVEAKPKEGPNRCTSCKKRVGLTGFKCRCGSLFCASHRYSDKHDCPFDYRSAAREAIAKANPVVKAEKLDKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A0E0E3V4_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.504e-58
Identity = 117/169 (69.23%), Postives = 127/169 (75.15%), Query Frame = 2
Query: 2264 ETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVA-----AALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            ETG Q  EGPILC+NNCGFFGSAATMNMCSKCHK MI+KQEQA+L ASSIDSIVNG  SG  KEP +A     A   V+     ++      PS       K KEGPNRC+ C KRVGLTGFNCRCGNL+CA HRYSDKHDC FDYR AARDAIAKANPVV+AEKLDKI
Sbjct:    5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSG--KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGKEGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
ZFAN6_HUMAN7.336e-2032.34AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_PONAB9.793e-2033.33AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN1.634e-1932.34AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP3_ORYSJ1.698e-1838.32Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH3.782e-1837.42Putative zinc finger A20 and AN1 domain-containing... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M1AEJ2_SOLTU1.210e-6068.60Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
C4NAL7_SOLPN3.931e-6067.44Stress-associated protein 5 OS=Solanum pennellii G... [more]
B9GW97_POPTR2.667e-5967.61Zinc finger family protein OS=Populus trichocarpa ... [more]
A9P8S9_POPTR6.033e-5970.00Zinc finger family protein OS=Populus trichocarpa ... [more]
A0A0E0E3V4_9ORYZ1.504e-5869.23Uncharacterized protein OS=Oryza meridionalis PE=4... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 144..181
e-value: 1.6E-16
score: 70.9
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 144..180
e-value: 2.5E-9
score: 37.0
IPR000058Zinc finger, AN1-typeGENE3D4.10.1110.10coord: 134..199
e-value: 1.5E-29
score: 101.2
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 141..184
score: 12.46
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 49..73
e-value: 2.6E-9
score: 46.9
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 50..73
e-value: 6.4E-13
score: 48.2
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 46..80
score: 9.599
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 39..203
NoneNo IPR availablePANTHERPTHR10634:SF32SUBFAMILY NOT NAMEDcoord: 39..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availableSUPERFAMILY118310AN1-like Zinc fingercoord: 135..198
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 51..87
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0091715 ID=g.barbadense_cottongen_reftransV1_0091715; Name=g.barbadense_cottongen_reftransV1_0091715; organism=Gossypium barbadense; type=contig; length=3330bp
AAATAAATAAACAACAATCCAAATGTTTTTAAAGTCCATTTACAAATTAA
AACCCACAACAGCCCAAACCTAAACCCATTTCAGACCCAAAATCATAGAA
ACCCTAAAGCCCACTAGCTATCAAATTTTCAGCAAGCAAACCCTAGCCCC
ATCCTCTGCCGCCGCATACCTCACTGCTTGCTACCACCATGTGCGCCTCC
TCGTCGCACTCCTCGAACGCCCCATCCACGCGTCCCACTCCTCTCTAACA
CCTGCAACAAGGAGTAAATACGAAGACAAAGAGAGTAATACATGTACAGG
AGAAAAATCAAGCAAAAACGACAAAAATGTAAAAGTAGATAGTCATCTTA
ATCGGCTATAAGAGCCGATTATTCTATTTTTTTATGCACACTGAAAATAC
AAGAGCAGATTAAAAGTTTCAAAAGGTTGTTTTTTTAGTTTCGTTTCATC
TTCTTGTTTCTTCTTATTGATTTTTTTTTTACATCGATCTATTTTGAAAT
AAAAGGGGGGAGGACTTACTTGAATCAACCCTAGTCCTTCGGCTAATGGT
TTGAATGAGTTTGGCCCCCTCAAAATACAAGAAATAAGGGTCAAAGTCCC
TTTTTTGAGTGACCCCGACCACCGCCCATGGTGGAACTGCGGCGGTTCAG
CGATGAGGCGATGATAGGTATATTACCCTAGCCGAATAAAGAGAAAGGGA
GAAGGAGAGAGCAAAGAAGCTCTCTGTTTTCTTTTTTTTTTAAATGATGA
TATAAATTCTTACCTTTTTTCTTAATTTTTATTTTAAAAATAAATTTTGT
TTGGTTGAAATTAGATGTGAAGAAAGAGATTATGTTTTATTTTATTTTGT
ATTAAAATTGTAAATTTTTTTTATGTGTATGTATTTTGCATGAGACAGGA
ATCGCTGGGTTCGATTTTGTCAGACAAGATCGGCCAAATTAAGATTTCAG
GCAAGGAATTTTCTTGATTAAGGGTTTTCTTCCCCTTTTTTTTCCGTCCT
TTTAAAGTTTAATTCTTGAAAAAAAAGAGATAATTTAGGTTTTGTTTTCA
TCTGGTTGTACTTGATCTGGGTCAATTGGGTGTTTAGGGTTTTTGCTAAA
AGAAATTGAATTTTTAAGAGTAATTAGAAATTTGTTTGCTGTTGCTGGCT
GCTTACTAAGAATTTTTAGTGTAAATCGAGATCAATTTATGTATTTTTAA
TTATGAGCTAGAGGACACTGGATTATCTGCTTCCTTTTGAGACTAATTAT
ATTCATGATGATATGGGGGGAAGTTCCTTAGCTTAAGTCTGCGTAATTGA
ACTAATTTTCTCAATTGCTATCGAGCAGTTATTGCCTTTTAACAATGGCA
AAAATGTTTTTGTTCTATGATTGTGAGAGACTCAGAGCCAATCTACACCC
AATATACTAATTGTGCAGCATATGCACGGCTTAACATTAGATATAATGGA
TATGGTTGCAAACATGTCGGTTCTGGGAATGTATTTTGGAACTTATGGTC
AATTGAAAGCCTATATTCCTAACTTCAGCTTGTTATCATGCTAAACTGAT
TTAAACAAAGGATGCTTTATATTATATATATGTGTGTATGTATCTATCAT
TGGTATTGGCAACTCCATGATGTTCTCTCTCTAATATGTTTGCTTATTGG
ATGTGTTGCTCGGACTTTATTTATTTTTAATGAACTGGTGTTGGAAACAG
TTTTGGACATGGGTTTAGGGATGTGACCCTCCGAGGGCCCACCAAATATA
TGGAAAATCTTAGGAAAAATTGAACATTCCTATGTTATCCGGCACAAACC
CAAGTAACATAGCTTCTTGGTTTATTGATGTTCATACATCCTACTTTCTG
CCCATACCTGTTATTCAACATTTTCCCTTTGATTGGTATTATTATCAGCT
GATGCGGTGTTGTTCCTTTAATGGTTATGTTGTAAGTAAACTAATTATCT
TCAATTTCGCATCACCTGAGATCGCTACAATTAGTAATGATAGTTATGTC
TGGTCTCTGGTGCACTATTGATTGATGAATCATGATGGAGATAGTTAGTC
CTTGGTATGAGTTCTTATCAAGTAAAATGATCTTTTACATGCTTAATATG
TGCTTATGTCCGTTTATTGATATCCATCTTTTGGAGTTGAATCATTTTGT
GGTTCTTCCTCTCTTCCTTTTGCTCTTATTTTCTTGAGTTCCTCCTTTAT
TTTGGGTTATTGGTAGTAAGGTGGTTTTGTTGCAGGAGATTAGAGAAGAT
GGACCCTCTTGATGAGACAGGCCGCCAAGCTTCAGAAGGCCCCATCCTGT
GTGTTAATAACTGTGGTTTCTTTGGAAGTGCGGCTACCATGAATATGTGC
TCCAAATGTCACAAGGCAATGATCCTGAAGCAGGAACAGGCACAACTCGT
AGCATCATCCATCGATAGCATTGTTAATGGCAGCACTAGCGGGAATGGTA
AGGAACCATCTGTTGCTGCTGCTTTGGCTGTGCAATGTGGAAATTTTGGG
TCAAAAATTGAATCATCCATCGATCCATCCCATATGACCTTCGGTGGGAT
GAAAACAAAAGAGGGTCCCAACAGGTGTAATGCATGCCACAAGCGTGTTG
GTTTGACAGGATTTAACTGCAGGTGTGGAAACCTCTTCTGTGCAGCTCAT
CGTTACTCCGACAAACATGACTGCCCTTTCGATTACCGAGCTGCTGCTCG
CGATGCTATTGCTAAAGCCAACCCAGTTGTTCGGGCAGAGAAGCTCGATA
AAATCTGAGAACAACCCGGATCAAGATGAAGATATGTGGATGGTGTATGT
AAGTTGGTTACTTGTCTCATCAAGTGTCCCCTTGATTGATATTAAATGTT
GGGAGTCCATCATAGGGAATGTTGGGAGTCCATCATAGGGAGGGACATGA
TTTGCATTGTAAGTCTATATTTTCCCCTGTTTGTAAGTGTTTTTATTTGT
GCTTGTTTGATGGACATTGATATGATCAACTTGTAATGCTTCTTCTTTGT
GGTATGCATTTTTTTTCTACTTTTTAAGTTGCCTTTTAAGTTTGAAAACT
ATTGAAGTCCACTTTGGGAAAATAAATTTGGGCATGAAGAGAATTGCAAA
TGTTATTCGAATTCGGAGGTACGTGTCTAATATGGGTATGGTTAAATACG
AATAGATATATGGGTGGTCGGATTTTGTAAGTCATCTCTTTATATTCATG
TGTAGGATGAATGCTGACGACGAATACAGGAGGTTTTGAGTGTTTATGGA
TTTGGGCTGATCCAAATTTATGCACAAAGAGATTGATTCATTTTAATTTT
TAGGGGGTTTTATTTTGGTCATTTAAGATG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
IPR002653Znf_A20
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding