g.barbadense_cottongen_reftransV1_0091715, g.barbadense_cottongen_reftransV1_0091715 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0091715
Unique Nameg.barbadense_cottongen_reftransV1_0091715
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3330
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.336e-20
Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ----LVASSIDSI--------VNGS---------TSGNGKEPSVAAALAVQCGNFGSK----------------IESSI-----DPSHMTFGGM-KTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +       A+S+ S+         +GS         ++ +  +PS  +  ++   +  S                 +++S+      PS      + K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.793e-20
Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ----LVASSIDSIVNG------------------STSGNGKEPSVAAALAVQCGNFGSKIES-SID-------------------PSHMTFGGM-KTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +       A+S+ S+                     STS + +   V+    +      S+++S S+D                   PS      + K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.634e-19
Identity = 65/201 (32.34%), Postives = 96/201 (47.76%), Query Frame = 2
Query: 2282 SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQ-LVASSIDSIVNGSTS-----GNGKEPSVAAALAVQCGNF----------------GSKIES-SIDPS--------------------HMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            S+ P+LC   CGF+G+  T  MCS C+K  + +Q  +   ++    S+ + S S      +G  P   +AL     +                  S+++S S+D +                      +    K K+  NRC  C K+VGLTGF CRCGN++C  HRYSD H+C ++Y+A A + I K NPVV  EK+ KI
Sbjct:    8 SQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.698e-18
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 2
Query: 2273 RQASEG-PILCVNNCGFFGSAATMNMCSKCHK--------AMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKL 2746
            +QAS G P+LC + CGF+G+ AT++MCS C++         M      +   AS+        TS +   PS            G+   S  +P   T   ++ K   NRC +C K+VGL GF CRCG  +C  HRY +KH C FD++ A+RDAIA+ANP+++ EKL
Sbjct:  195 QQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVN--------GAAFSSKNNPEPATV--VEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.782e-18
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 2
Query: 2291 PILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            P LC+  CGFF ++ T N+CSKC+    LK E A+ +A+                            N  +K    +     T  G K       C AC K+VGL GF+CRCG+LF A+HRY ++H CP DY++AA D +AK NPVV+ +KL ++
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDF-LKDESARYLATF---------------------------NVNTKAAEEVTAQEATVLGSK-----GGC-ACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A0D2PYJ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G229200 PE=4 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.659e-99
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTF GMKTKEGPNRCNACHKRVGLTGF+C+CGN+FCAAHRYSDKH+CPFDYR AARDAIAKANPVVRAEKLDKI
Sbjct:    1 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFSGMKTKEGPNRCNACHKRVGLTGFSCKCGNIFCAAHRYSDKHNCPFDYRTAARDAIAKANPVVRAEKLDKI 169          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: D2I9L5_GOSAR (Zinc finger protein OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.827e-99
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            MDP DETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGF+CRCGN+FCAAHRYSDKH+CPFDYR AARDAIAKANPVVRAEKLDKI
Sbjct:    1 MDPHDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFSCRCGNIFCAAHRYSDKHNCPFDYRTAARDAIAKANPVVRAEKLDKI 169          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A061EY86_THECC (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 4 OS=Theobroma cacao GN=TCM_024819 PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.088e-84
Identity = 150/176 (85.23%), Postives = 154/176 (87.50%), Query Frame = 2
Query: 2237 RLEKMDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSK---IESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            RLEKM+  DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQ QL ASSI SIVNGS+SGNGKEP++AAAL VQ G F SK    E SIDPS MTFGGMK KEGPNRC  C KRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYR AARDAIAKANPVVRAEKLDKI
Sbjct:    7 RLEKMESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQVQLAASSIGSIVNGSSSGNGKEPTLAAALDVQSGIFESKNGSAEPSIDPSRMTFGGMKIKEGPNRCTTCRKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRTAARDAIAKANPVVRAEKLDKI 182          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A061F4C3_THECC (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 1 OS=Theobroma cacao GN=TCM_024819 PE=4 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 1.148e-81
Identity = 146/172 (84.88%), Postives = 150/172 (87.21%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSK---IESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+  DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQ QL ASSI SIVNGS+SGNGKEP++AAAL VQ G F SK    E SIDPS MTFGGMK KEGPNRC  C KRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYR AARDAIAKANPVVRAEKLDKI
Sbjct:    1 MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQVQLAASSIGSIVNGSSSGNGKEPTLAAALDVQSGIFESKNGSAEPSIDPSRMTFGGMKIKEGPNRCTTCRKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRTAARDAIAKANPVVRAEKLDKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A0B0MTW0_GOSAR (Zinc finger A20 and AN1 domain-containing stress-associated 8 OS=Gossypium arboreum GN=F383_25110 PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.026e-78
Identity = 144/175 (82.29%), Postives = 152/175 (86.86%), Query Frame = 2
Query: 2240 LEKMDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESS---IDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            LEKM+  DETG QA EGPILC+NNCGFFGSAATMNMCSKCHKAMILKQEQAQL ASSI SIVNGS++GNGKEP+VA AL VQ GN  +K+ S+   IDPS  T  GMK KEGPNRC  C KRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRAAARDAIAKANPVVRAEKLDKI
Sbjct:    6 LEKMESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKAMILKQEQAQLAASSIGSIVNGSSTGNGKEPAVATALDVQSGNADTKMVSTELPIDPSGTTSCGMKMKEGPNRCTKCCKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRAAARDAIAKANPVVRAEKLDKI 180          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A0D2SQ39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G358100 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 3.269e-75
Identity = 140/172 (81.40%), Postives = 148/172 (86.05%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESS---IDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+  DETG QA EGPILC+NNCGFFGSAATMNMCSKCHKAMILKQEQAQL ASSI  IVNGS++GN KEP+VA AL VQ GN  +K+ S+   IDPS  T  GMKTKEGPNRC  C KRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRAAARDAIAKANPVVRAEKLDKI
Sbjct:    1 MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKAMILKQEQAQLAASSIGIIVNGSSTGNSKEPAVATALDVQSGNADTKLVSTELPIDPSGTTSCGMKTKEGPNRCTKCCKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRAAARDAIAKANPVVRAEKLDKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A0D2RW59_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G139100 PE=4 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 2.369e-73
Identity = 133/172 (77.33%), Postives = 146/172 (84.88%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+  DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQ QL A SI SIV+G +SG+ KEP+VAAAL VQ  N  SKI   E SIDPS  T   ++TK+GPNRC+ CHKRVGLTGFNCRC NLFCAAHRYSDKH+CPFDY+AAAR+AI+KANPVVRAEKLDKI
Sbjct:    1 MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQVQLAAVSIGSIVSGCSSGSSKEPAVAAALDVQPVNIESKIVSAEPSIDPSRTTVSELETKKGPNRCSTCHKRVGLTGFNCRCENLFCAAHRYSDKHECPFDYQAAARNAISKANPVVRAEKLDKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A067F211_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030304mg PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.746e-68
Identity = 128/176 (72.73%), Postives = 142/176 (80.68%), Query Frame = 2
Query: 2237 RLEKMDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDP---SHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
             +EKM+  DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMIL QEQAQL ASSI SIV+GS+ G GKEP VA ++ +Q G    K + S++P   S   F G+K KEGP RC  C+KRVGLTGFNCRCGNLFCA HRYSDKH CPFDYR AAR+AIAKANPVV+AEKLDKI
Sbjct:    5 EVEKMESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIK-KFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 179          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A5BFH0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07950 PE=4 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 7.019e-68
Identity = 128/172 (74.42%), Postives = 137/172 (79.65%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSK---IESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+  DETG QA EGPILC+NNCGFFGSAATMNMCSKCHK + LKQEQA+L ASSI SIVNGS+SGNGKEP VA  + VQ G    K    E+S D S       K KEGPNRC AC KRVGLTGFNC+CGNLFCA HRYSDKHDCPFDYR AARDAIAKANPVV+AEKLDKI
Sbjct:    1 MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDLALKQEQAKLAASSIGSIVNGSSSGNGKEPIVAGTVDVQAGPVEVKAISAEASNDSSSNQIIESKVKEGPNRCTACRKRVGLTGFNCKCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172          
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A9PJ34_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 4.824e-67
Identity = 127/171 (74.27%), Postives = 140/171 (81.87%), Query Frame = 2
Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTF--GGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755
            M+  DETG QA EGPILC+NNCGFFGSAATMNMCSKCHK +IL Q+QAQL ASSI+SIVNG++SGNGKEP VA A+ VQ      KI S+ +PS  +     MK KEGP+RC AC KRVGLTGF CRCGNLFCA HRYSDKHDCPFDYR AARDAIAKANPVV+AEKLDKI
Sbjct:    1 MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDIILNQQQAQLAASSIESIVNGNSSGNGKEPVVAGAVDVQAAPVEVKIIST-EPSIASSKPSEMKAKEGPSRCTACRKRVGLTGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
ZFAN6_HUMAN7.336e-2032.34AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_PONAB9.793e-2033.33AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN1.634e-1932.34AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP3_ORYSJ1.698e-1838.32Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH3.782e-1837.42Putative zinc finger A20 and AN1 domain-containing... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2PYJ6_GOSRA2.659e-9996.45Uncharacterized protein OS=Gossypium raimondii GN=... [more]
D2I9L5_GOSAR2.827e-9997.04Zinc finger protein OS=Gossypium arboreum PE=2 SV=... [more]
A0A061EY86_THECC2.088e-8485.23Zinc finger A20 and AN1 domain-containing stress-a... [more]
A0A061F4C3_THECC1.148e-8184.88Zinc finger A20 and AN1 domain-containing stress-a... [more]
A0A0B0MTW0_GOSAR7.026e-7882.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
A0A0D2SQ39_GOSRA3.269e-7581.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RW59_GOSRA2.369e-7377.33Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067F211_CITSI1.746e-6872.73Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A5BFH0_VITVI7.019e-6874.42Putative uncharacterized protein OS=Vitis vinifera... [more]
A9PJ34_9ROSI4.824e-6774.27Putative uncharacterized protein OS=Populus tricho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 144..181
e-value: 1.6E-16
score: 70.9
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 144..180
e-value: 2.5E-9
score: 37.0
IPR000058Zinc finger, AN1-typeGENE3D4.10.1110.10coord: 134..199
e-value: 1.5E-29
score: 101.2
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 141..184
score: 12.46
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 49..73
e-value: 2.6E-9
score: 46.9
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 50..73
e-value: 6.4E-13
score: 48.2
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 46..80
score: 9.599
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 39..203
NoneNo IPR availablePANTHERPTHR10634:SF32SUBFAMILY NOT NAMEDcoord: 39..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availableSUPERFAMILY118310AN1-like Zinc fingercoord: 135..198
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 51..87
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0091715 ID=g.barbadense_cottongen_reftransV1_0091715; Name=g.barbadense_cottongen_reftransV1_0091715; organism=Gossypium barbadense; type=contig; length=3330bp
AAATAAATAAACAACAATCCAAATGTTTTTAAAGTCCATTTACAAATTAA
AACCCACAACAGCCCAAACCTAAACCCATTTCAGACCCAAAATCATAGAA
ACCCTAAAGCCCACTAGCTATCAAATTTTCAGCAAGCAAACCCTAGCCCC
ATCCTCTGCCGCCGCATACCTCACTGCTTGCTACCACCATGTGCGCCTCC
TCGTCGCACTCCTCGAACGCCCCATCCACGCGTCCCACTCCTCTCTAACA
CCTGCAACAAGGAGTAAATACGAAGACAAAGAGAGTAATACATGTACAGG
AGAAAAATCAAGCAAAAACGACAAAAATGTAAAAGTAGATAGTCATCTTA
ATCGGCTATAAGAGCCGATTATTCTATTTTTTTATGCACACTGAAAATAC
AAGAGCAGATTAAAAGTTTCAAAAGGTTGTTTTTTTAGTTTCGTTTCATC
TTCTTGTTTCTTCTTATTGATTTTTTTTTTACATCGATCTATTTTGAAAT
AAAAGGGGGGAGGACTTACTTGAATCAACCCTAGTCCTTCGGCTAATGGT
TTGAATGAGTTTGGCCCCCTCAAAATACAAGAAATAAGGGTCAAAGTCCC
TTTTTTGAGTGACCCCGACCACCGCCCATGGTGGAACTGCGGCGGTTCAG
CGATGAGGCGATGATAGGTATATTACCCTAGCCGAATAAAGAGAAAGGGA
GAAGGAGAGAGCAAAGAAGCTCTCTGTTTTCTTTTTTTTTTAAATGATGA
TATAAATTCTTACCTTTTTTCTTAATTTTTATTTTAAAAATAAATTTTGT
TTGGTTGAAATTAGATGTGAAGAAAGAGATTATGTTTTATTTTATTTTGT
ATTAAAATTGTAAATTTTTTTTATGTGTATGTATTTTGCATGAGACAGGA
ATCGCTGGGTTCGATTTTGTCAGACAAGATCGGCCAAATTAAGATTTCAG
GCAAGGAATTTTCTTGATTAAGGGTTTTCTTCCCCTTTTTTTTCCGTCCT
TTTAAAGTTTAATTCTTGAAAAAAAAGAGATAATTTAGGTTTTGTTTTCA
TCTGGTTGTACTTGATCTGGGTCAATTGGGTGTTTAGGGTTTTTGCTAAA
AGAAATTGAATTTTTAAGAGTAATTAGAAATTTGTTTGCTGTTGCTGGCT
GCTTACTAAGAATTTTTAGTGTAAATCGAGATCAATTTATGTATTTTTAA
TTATGAGCTAGAGGACACTGGATTATCTGCTTCCTTTTGAGACTAATTAT
ATTCATGATGATATGGGGGGAAGTTCCTTAGCTTAAGTCTGCGTAATTGA
ACTAATTTTCTCAATTGCTATCGAGCAGTTATTGCCTTTTAACAATGGCA
AAAATGTTTTTGTTCTATGATTGTGAGAGACTCAGAGCCAATCTACACCC
AATATACTAATTGTGCAGCATATGCACGGCTTAACATTAGATATAATGGA
TATGGTTGCAAACATGTCGGTTCTGGGAATGTATTTTGGAACTTATGGTC
AATTGAAAGCCTATATTCCTAACTTCAGCTTGTTATCATGCTAAACTGAT
TTAAACAAAGGATGCTTTATATTATATATATGTGTGTATGTATCTATCAT
TGGTATTGGCAACTCCATGATGTTCTCTCTCTAATATGTTTGCTTATTGG
ATGTGTTGCTCGGACTTTATTTATTTTTAATGAACTGGTGTTGGAAACAG
TTTTGGACATGGGTTTAGGGATGTGACCCTCCGAGGGCCCACCAAATATA
TGGAAAATCTTAGGAAAAATTGAACATTCCTATGTTATCCGGCACAAACC
CAAGTAACATAGCTTCTTGGTTTATTGATGTTCATACATCCTACTTTCTG
CCCATACCTGTTATTCAACATTTTCCCTTTGATTGGTATTATTATCAGCT
GATGCGGTGTTGTTCCTTTAATGGTTATGTTGTAAGTAAACTAATTATCT
TCAATTTCGCATCACCTGAGATCGCTACAATTAGTAATGATAGTTATGTC
TGGTCTCTGGTGCACTATTGATTGATGAATCATGATGGAGATAGTTAGTC
CTTGGTATGAGTTCTTATCAAGTAAAATGATCTTTTACATGCTTAATATG
TGCTTATGTCCGTTTATTGATATCCATCTTTTGGAGTTGAATCATTTTGT
GGTTCTTCCTCTCTTCCTTTTGCTCTTATTTTCTTGAGTTCCTCCTTTAT
TTTGGGTTATTGGTAGTAAGGTGGTTTTGTTGCAGGAGATTAGAGAAGAT
GGACCCTCTTGATGAGACAGGCCGCCAAGCTTCAGAAGGCCCCATCCTGT
GTGTTAATAACTGTGGTTTCTTTGGAAGTGCGGCTACCATGAATATGTGC
TCCAAATGTCACAAGGCAATGATCCTGAAGCAGGAACAGGCACAACTCGT
AGCATCATCCATCGATAGCATTGTTAATGGCAGCACTAGCGGGAATGGTA
AGGAACCATCTGTTGCTGCTGCTTTGGCTGTGCAATGTGGAAATTTTGGG
TCAAAAATTGAATCATCCATCGATCCATCCCATATGACCTTCGGTGGGAT
GAAAACAAAAGAGGGTCCCAACAGGTGTAATGCATGCCACAAGCGTGTTG
GTTTGACAGGATTTAACTGCAGGTGTGGAAACCTCTTCTGTGCAGCTCAT
CGTTACTCCGACAAACATGACTGCCCTTTCGATTACCGAGCTGCTGCTCG
CGATGCTATTGCTAAAGCCAACCCAGTTGTTCGGGCAGAGAAGCTCGATA
AAATCTGAGAACAACCCGGATCAAGATGAAGATATGTGGATGGTGTATGT
AAGTTGGTTACTTGTCTCATCAAGTGTCCCCTTGATTGATATTAAATGTT
GGGAGTCCATCATAGGGAATGTTGGGAGTCCATCATAGGGAGGGACATGA
TTTGCATTGTAAGTCTATATTTTCCCCTGTTTGTAAGTGTTTTTATTTGT
GCTTGTTTGATGGACATTGATATGATCAACTTGTAATGCTTCTTCTTTGT
GGTATGCATTTTTTTTCTACTTTTTAAGTTGCCTTTTAAGTTTGAAAACT
ATTGAAGTCCACTTTGGGAAAATAAATTTGGGCATGAAGAGAATTGCAAA
TGTTATTCGAATTCGGAGGTACGTGTCTAATATGGGTATGGTTAAATACG
AATAGATATATGGGTGGTCGGATTTTGTAAGTCATCTCTTTATATTCATG
TGTAGGATGAATGCTGACGACGAATACAGGAGGTTTTGAGTGTTTATGGA
TTTGGGCTGATCCAAATTTATGCACAAAGAGATTGATTCATTTTAATTTT
TAGGGGGTTTTATTTTGGTCATTTAAGATG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
IPR002653Znf_A20
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding