g.barbadense_cottongen_reftransV1_0091715, g.barbadense_cottongen_reftransV1_0091715 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 4.223e-60 Identity = 116/169 (68.64%), Postives = 127/169 (75.15%), Query Frame = 2 Query: 2264 ETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVA-----AALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 ETG Q EGPILC+NNCGFFGSAATMNMCSKCHK MI+KQEQA+L ASSIDSIVNG SG KEP +A A V+ ++ PS K +EGPNRC+ C KRVGLTGFNCRCGNL+CA HRYSDKHDC FDYR AARDAIAKANPVV+AEKLDKI Sbjct: 5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSG--KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 4.223e-60 Identity = 116/169 (68.64%), Postives = 127/169 (75.15%), Query Frame = 2 Query: 2264 ETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVA-----AALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 ETG Q EGPILC+NNCGFFGSAATMNMCSKCHK MI+KQEQA+L ASSIDSIVNG SG KEP +A A V+ ++ PS K +EGPNRC+ C KRVGLTGFNCRCGNL+CA HRYSDKHDC FDYR AARDAIAKANPVV+AEKLDKI Sbjct: 5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSG--KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.429e-55 Identity = 115/179 (64.25%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 2264 ETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAA--------------LAVQCGNF-GSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 E G Q EGPILC+NNCGFFGSAATMNMCSKCHK MI+K+EQA+L ASSIDSIVNG GKE VAA+ L VQ + G+ E ++ P K KEGPNRC C KRVGLTGFNCRCGN++CA HRYSDKH+C FDYR AARDAIAKANPVV+AEKLDKI Sbjct: 5 EAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCD--GGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVP--------KVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.702e-37 Identity = 92/173 (53.18%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 2261 DETGRQAS-EGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGG-------MKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 D+TG Q+ EGP LC NNCGFFGSAATMNMCSKCHK M+ +QEQ AS+ S+S KE AA + ++ + + S+ PS + +GP+RC C+KRVGLTGF CRCG+LFC HRY+D HDC F+Y AAA++AIAKANPVV+AEKLDKI Sbjct: 4 DKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA--VSGTSSSSNIIKETFTAALVDIETKSV-EPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.254e-30 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 2276 QASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIE-------SSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 + EG LCVNNCGFFGS+ATMN+CS C+ + LKQ+Q + S+++S ++ P +A L N+ +++E P + + PNRC C KRVGLTGF CRCG FC +HRY + H C FD+++A R+ IAKANP+V A KL KI Sbjct: 8 ETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS---------PVIAPVLE----NYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.959e-30 Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 2261 DETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 +ETG E PILCVNNCGFFGS T NMCSKC++ + +A+ VA+ ++ S S + L + + GS S+ K NRC +C K+VGLTGF CRCG FC+ HRY+D H C FDY+ R+ IAK NP+V+A+K+ KI Sbjct: 11 EETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVEKKPLASLS--------STPLVTEVTDGGS---GSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.715e-29 Identity = 74/164 (45.12%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 2264 ETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 E E PILCVNNCGFFGS+ T NMCSKC++ + A V + S+S EP A V K + P K NRC +C K+VGLTGF CRCG FC+ HRY++ HDC FDY+ A RD IAK NPVV AEK++KI Sbjct: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEK-KAFTPASSSKTPLEP--AKPDEVPAAAVEDKQAAQEPP----------KPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.404e-24 Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 2 Query: 2261 DETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAV-------QCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 D T SE P LCV CGFFGS + MN+CSKC++ + +EQ ++++ +N + + S V G + +DP T RC +C+K+VG+TGF CRCG+ FC HRY + H+C FD++ AR+AIAKANPVV+A+K+D+I Sbjct: 7 DSTSFSPSE-PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTA---------TRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.704e-24 Identity = 69/164 (42.07%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 2273 RQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSI---DSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 RQ P+ C N CGFFGSA T +CSKC++ ++ Q A A+ D +V + G ++ P G KTK +RC AC + VGL GF CRCG +FC AHRYSD+HDC +DYR A RDAIA+ANPVVR +K++K+ Sbjct: 7 RQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQSAEHDQVVLPAPEG-------------------VPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.676e-24 Identity = 64/182 (35.16%), Postives = 96/182 (52.75%), Query Frame = 2 Query: 2243 EKMDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGN-----------GKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 E+ D T QASE P LCV CGFFGS + M++CSKC++ + ++ Q + ++++ S + +P AA + V S + + +PS NRC C+K+VG+ GF C+CG+ FC HRY + HDC FD++ R IAKANPVV+A+K+ + Sbjct: 4 EQNDSTSFTQSQASE-PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPART--------NRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A9PEQ1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05220g PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 4.824e-67 Identity = 127/171 (74.27%), Postives = 140/171 (81.87%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTF--GGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG QA EGPILC+NNCGFFGSAATMNMCSKCHK +IL Q+QAQL ASSI+SIVNG++SGNGKEP VA A+ VQ KI S+ +PS + MK KEGP+RC AC KRVGLTGF CRCGNLFCA HRYSDKHDCPFDYR AARDAIAKANPVV+AEKLDKI Sbjct: 1 MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDIILNQQQAQLAASSIESIVNGNSSGNGKEPVVAGAVDVQAAPVEVKIIST-EPSIASSKPSEMKAKEGPSRCTACRKRVGLTGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: B9N6U9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s05520g PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 7.760e-67 Identity = 127/172 (73.84%), Postives = 141/172 (81.98%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGG---MKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG QA EGPILC+NNCGFFGSAATMNMCSKCHK +ILKQ+QAQL ASSI+SIVNG++SGNGKEP VA A+ VQ KI S+ +PS T MK KEGP+RC +C KRVGLTGF+CRCGNLFCA HRYSDKH+C FDYR AARDAIAKANPVVRAEKLDKI Sbjct: 1 MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDIILKQQQAQLAASSIESIVNGNSSGNGKEPVVAVAVDVQSAPVEVKIIST-EPSSATSSKPSEMKAKEGPSRCTSCRKRVGLTGFSCRCGNLFCAVHRYSDKHNCRFDYRNAARDAIAKANPVVRAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A067ETN4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030304mg PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 8.243e-67 Identity = 126/172 (73.26%), Postives = 139/172 (80.81%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDP---SHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMIL QEQAQL ASSI SIV+GS+ G GKEP VA ++ +Q G K + S++P S F G+K KEGP RC C+KRVGLTGFNCRCGNLFCA HRYSDKH CPFDYR AAR+AIAKANPVV+AEKLDKI Sbjct: 1 MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIK-KFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A1ECK5_9ROSI (Putative multiple stress-responsive zinc-finger protein OS=Citrus hybrid cultivar PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.233e-66 Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDP---SHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMIL QEQAQL ASSI SIV+GS+ G GKEP +A ++ +Q G K + S++P S F G+K KEGP RC C+KRVGLTGFNCRCGNLFCA HRYSDKH CPFDYR AAR+AIAKANPVV+AEKLDKI Sbjct: 1 MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIIAGSVDLQVGPVEIK-KFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: V4S339_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006050mg PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.233e-66 Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDP---SHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMIL QEQAQL ASSI SIV+GS+ G GKEP +A ++ +Q G K + S++P S F G+K KEGP RC C+KRVGLTGFNCRCGNLFCA HRYSDKH CPFDYR AAR+AIAKANPVV+AEKLDKI Sbjct: 1 MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIIAGSVDLQVGPVEIK-KFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A068UR40_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_43 OS=Coffea canephora GN=GSCOC_T00030686001 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.450e-64 Identity = 120/172 (69.77%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNF---GSKIESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ ETG QA EGPILC+NNCGFFGSAATMNMCSKCHK MILKQEQA+L ASSI++IVNGS++ NGKEP AL +Q ++SI+ +K KEGPNRC CHKRVGLTGFNCRCGNLFCA HRYSDKH+CPFDYR AARDAIA+ANPVV+AEKLDKI Sbjct: 45 MESSKETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMILKQEQAKLAASSIENIVNGSSTNNGKEPVATGALPIQAMPVDLEAVSTQASINVLAGQGSEVKVKEGPNRCTTCHKRVGLTGFNCRCGNLFCAVHRYSDKHECPFDYRNAARDAIARANPVVKAEKLDKI 216
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: A0A068UPA9_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_43 OS=Coffea canephora GN=GSCOC_T00030687001 PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 2.426e-63 Identity = 122/172 (70.93%), Postives = 138/172 (80.23%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSHMTFGG---MKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ +ETG QA EGPILC+NNCGFFGSAATMNMCSKCHK MILKQEQA+L ASSI++IVNGS+S KEP V ALAVQ + ++ S+ + G K KEGPNRC+ C KRVGLTGFNCRCGNLFCA HRYSDKH+CPFDYRAAA+DAIAKANPVV+AEKLDKI Sbjct: 92 MESSEETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMILKQEQAKLAASSIENIVNGSSSSKEKEPVVTGALAVQAVSADFEVVSTKASPEILVGQGSEAKVKEGPNRCSTCRKRVGLTGFNCRCGNLFCAVHRYSDKHECPFDYRAAAQDAIAKANPVVKAEKLDKI 263
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: F6GU85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01820 PE=4 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.219e-62 Identity = 124/169 (73.37%), Postives = 136/169 (80.47%), Query Frame = 2 Query: 2261 DETGRQA-SEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 DETG QA EGPILC+NNCGFFGS ATMNMCSKCHK M+LKQEQA+L ASSIDSIVNGS+S NGKEP++A+ + VQ KI +SS G K KEGPNRC+ C KRVGLTGFNCRCG+LFCA HRYSDKHDCPFDYR AARDAIAKANPVV+AEKLDKI Sbjct: 4 DETGCQAHPEGPILCINNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIDSIVNGSSSNNGKEPAIASTVDVQVDAKEPKIISVQSSFSFGSEGSGEAKPKEGPNRCSTCKKRVGLTGFNCRCGHLFCATHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: M5VS58_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012365mg PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.028e-61 Identity = 114/172 (66.28%), Postives = 130/172 (75.58%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ DETG Q + PILC+NNCGFFG AATMNMCSKC+K +LKQEQA ASSIDSIVNGS+S G P VA + VQ G +++ E SID S +K KEGP+RC C KRVGLTGFNC+CGN FCA+HRYSDKHDCPFDYR A +DAIAKANPVV+AEKLDKI Sbjct: 1 MESHDETGCQTPDRPILCINNCGFFGRAATMNMCSKCYKDTLLKQEQANFAASSIDSIVNGSSSSIGIGPVVAGVVDVQAGQVETRVVSTEPSIDSSSSMVFEVKEKEGPSRCTTCRKRVGLTGFNCKCGNTFCASHRYSDKHDCPFDYRTAGQDAIAKANPVVKAEKLDKI 172
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Match: C4NAK4_SOLLC (Stress-associated protein 5 OS=Solanum lycopersicum GN=SAP5 PE=4 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.210e-60 Identity = 118/172 (68.60%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 2249 MDPLDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVNGSTSGNGKEPSVAAALAVQCGNFGSKI---ESSIDPSHMTFGGMKTKEGPNRCNACHKRVGLTGFNCRCGNLFCAAHRYSDKHDCPFDYRXXXXXXXXXXNPVVRAEKLDKI 2755 M+ ETG QA EGPILC+NNCGFFGSAATMNMCSKCHK MILKQEQA+ A+SI++IVNG++S NGKEP A+ VQ G+ K+ E+S D S +K KEGP RC C KRVGLTGFNC+CGNLFCAAHRYSDKH+CPFDY+ A RDAIAKANPVV AEKL+KI Sbjct: 1 MESSKETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDMILKQEQAKFAATSIENIVNGNSSSNGKEPIATGAINVQPGSADLKVISTEASSDLSSGPSSEVKPKEGPTRCTTCRKRVGLTGFNCKCGNLFCAAHRYSDKHECPFDYKNAGRDAIAKANPVVVAEKLNKI 172 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0091715 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091715 ID=g.barbadense_cottongen_reftransV1_0091715; Name=g.barbadense_cottongen_reftransV1_0091715; organism=Gossypium barbadense; type=contig; length=3330bpback to top |