g.barbadense_cottongen_reftransV1_0091710, g.barbadense_cottongen_reftransV1_0091710 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP1B_ARATH (Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2) HSP 1 Score: 443.351 bits (1139), Expect = 2.698e-148 Identity = 216/289 (74.74%), Postives = 249/289 (86.16%), Query Frame = -3 Query: 944 FVGFPFTSYASTLHGKQCRSQP-DLVVYSKRVSGLEEALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1807 F+G P TS + +L GK+ P V +K+VSGLEEA+RIR+ EL+ +K RR PPLRRG+VSPRL VPDHIP+PPY+ S +LP+ISSE QI EGIA+MRAACELAARVL+YAGTLV+PSVTT++IDK VH+MI EAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTS+TF CG+V +RLV VTEEC+E+GIAVCKDGASFKKIGKRISEHAEK+GY VVERFVGHGVG VFHS+P+I H+RN+ PG+MVEGQTFTI Sbjct: 33 FLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTI 321 HSP 2 Score: 85.5001 bits (210), Expect = 1.848e-16 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -1 Query: 298 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 447 T EPILT+G EC TWPDNWTT+T+DG AAQFEHTILITRTG+EILTKC Sbjct: 320 TIEPILTIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP1C_ARATH (Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2) HSP 1 Score: 372.089 bits (954), Expect = 6.711e-121 Identity = 183/254 (72.05%), Postives = 211/254 (83.07%), Query Frame = -3 Query: 944 ALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGV--MVEGQTFTI 1699 +LRI+R +LQ T + R PPL G VSPRL VPDHI KP Y+ S+ +PEISSE QI D+ GI +M+ ACELAARVLDYAGTLVRP VTTD+IDK VH+M+ E GAYPSPLGYGGFPKSVCTSVNECM HGIPDSR LQ+GDIINIDV VYL+GYHGDTSKTFLCGDV+G L++LV VTEEC+EKGI+VCKDGASFK+IGK ISEHA KYGY +ERF+GHGVGTV HS+P+I H N + M+EGQTFT+ Sbjct: 43 SLRIKRIQQLQSTLEDRINPPLVCGTVSPRLSVPDHILKPLYVESSKVPEISSELQIPDSIGIVKMKKACELAARVLDYAGTLVRPFVTTDEIDKAVHQMVIEFGAYPSPLGYGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFKQIGKIISEHAAKYGYN-MERFIGHGVGTVLHSEPLIYLHSNYDYELEYMIEGQTFTL 295 HSP 2 Score: 75.485 bits (184), Expect = 2.949e-13 Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = -1 Query: 304 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILT 447 T EPILT+G E TWPD WT VT+DG PAAQFEHTILIT TGAEILT Sbjct: 294 TLEPILTIGTTEFVTWPDKWTIVTADGGPAAQFEHTILITTTGAEILT 341
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP1D_ARATH (Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 1.351e-102 Identity = 164/262 (62.60%), Postives = 195/262 (74.43%), Query Frame = -3 Query: 944 SKRVSGLEEALRIRR-ECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1726 S+ SGL + L RR E E+ + R RP G VSPR PVP HI KPPY+ S P ISS ++HD +GI MRA+ LAARV DYAGTLV+P VTTD+ID+ VH MI E GAYPSPLGYGGFPKSVCTSVNEC+CHGIPDSR L+DGDIINIDVTVYLNGYHGDTS TF CG+V ++LV VT+E ++K I++C G +KKIGK I + A+K+ YGVV +FVGHGVG+VFH+ P++LH RN G MV QTFTI Sbjct: 45 SRTFSGLTDLLFNRRNEDEVIDGKRKRLRP----GNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVEYKKIGKVIHDLADKHKYGVVRQFVGHGVGSVFHADPVVLHFRNNEAGRMVLNQTFTI 302 HSP 2 Score: 71.633 bits (174), Expect = 4.756e-12 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = -1 Query: 298 SRMYIDAF*TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 474 RM ++ T EP+LT+G W DNWT VT D S +AQFEHTILIT+ GAEILTKC Sbjct: 292 GRMVLNQTFTIEPMLTIGSRNPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILTKC 350
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP12_DICDI (Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 3.537e-75 Identity = 128/253 (50.59%), Postives = 161/253 (63.64%), Query Frame = -3 Query: 944 IRRECELQGTTKFRRRPP--LRRGKVSPRLPVPDHIPKPPYLSSN--ILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1690 + R+ + TTK R P +R G VSP+ +P HI KP Y+ I EI +IH AE I MR ++A VL+YAGTLVRP +TTD+IDK+VH+ I + GAYPSPLGY GFPKS+CTS+NE +CHGIPD R L+ GDI+ IDVT+Y NGYHGDT TF G++ +RL+ TE+ + I KDGA F KIGK+I A KY V F GHG+G +FH+ P + NE VM EG FTI Sbjct: 102 MNRKERRKMTTKLYRNPDNLIRGGIVSPQPLIPAHIKKPKYVLGEPVIDFEIDDPIEIHTAESIEHMRVVGKMAKEVLEYAGTLVRPGITTDEIDKLVHQNIIDRGAYPSPLGYKGFPKSICTSINEVLCHGIPDDRPLEFGDIVKIDVTLYYNGYHGDTCATFPVGEIDSSSKRLIEATEKALYAAIGEVKDGALFNKIGKKIQLVANKYSLSVTPEFTGHGIGQLFHTAPFVFQCANEFDSVMKEGMIFTI 354
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP12_HUMAN (Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=METAP1D PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.957e-71 Identity = 119/228 (52.19%), Postives = 149/228 (65.35%), Query Frame = -3 Query: 944 GKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1627 VS PVP HI KP Y+++ I+P+ ++ + + I + AC+LA VL AG ++ +TT++ID +VH I AYPSPLGYGGFPKSVCTSVN +CHGIPDSR LQDGDIINIDVTVY NGYHGDTS+TFL G+V ++LV V C ++ IA C+ GA F IG IS + G+ V FVGHG+G+ FH P I HH N+S M EG FTI Sbjct: 56 AAVSSAHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISHITHQNGFQVCPHFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTI 283
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP12_MOUSE (Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Metap1d PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.559e-70 Identity = 119/226 (52.65%), Postives = 147/226 (65.04%), Query Frame = -3 Query: 944 VSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1621 VSP PVP I KP Y+++ I+P+ ++ D + I +R AC LA VL AG ++ +TT++ID +VH I AYPSPLGYG FPKSVCTSVN +CHGIPDSR LQDGDIINIDVTVY NGYHGDTS+TFL G+V ++LV V C ++ IA C+ GA F IG IS + G V FVGHG+G+ FH P I HH N++ M EG FTI Sbjct: 58 VSPAHPVPKRIKKPDYVTTGIVPDWGDSIEVKDEDQIQGLREACRLARHVLLLAGKSLKVDMTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISRITHQNGLQVCPHFVGHGIGSYFHGHPEIWHHANDNDLPMEEGMAFTI 283
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP12_DANRE (Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.532e-68 Identity = 121/242 (50.00%), Postives = 151/242 (62.40%), Query Frame = -3 Query: 944 FRRRPP-----LRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1654 F R+P +R V P PVP HI +P Y+SS+ +PE +I D E I +R AC+LA +L G ++ +TTD+ID +VH+ YPSPL YGGFPKSVCTSVN +CHGIPDSR LQDGDIINIDVTVYL GYHGDTS+TFL G V+ ++LV V +C ++ IA C G IG IS A G+ V F+GHG+G FH P I HH N++ M EG +FTI Sbjct: 45 FWRKPKTSHSVVRPAIVRPAYPVPKHIQRPDYVSSSKVPEWPDYIEIKDEEQIQGLRRACQLARHILLLTGNSLKVGMTTDEIDFIVHQEAIRHNGYPSPLHYGGFPKSVCTSVNNVVCHGIPDSRPLQDGDIINIDVTVYLEGYHGDTSETFLIGSVNDQGRKLVDVARQCRDQAIAACGPGQPLCVIGNIISNIANSNGFRVCPYFIGHGIGEYFHGHPEIWHHANDNDLKMEEGMSFTI 286
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP1A_ARATH (Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.036e-63 Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = -3 Query: 944 FRRRPPLRRGKVSPRLPVPDHIPKPPYL---SSNILPEISSEH--QIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHH-RNESPGVMVEGQTFTI 1654 F PL++ +S + VP I KP + + + P +H +I E I +MR C++A VLD A ++ P VTTD+ID+VVHE AG YPSPL Y FPKS CTSVNE +CHGIPD+R+L+DGDI+N+DVTV G HGD ++T+ G+V ++LV T EC+EK IA+ K G F++IG+ ++ HA G VV + GHG+G +FH P I H+ RN++ GVM GQTFTI Sbjct: 95 FDWTGPLKQYPISTKRVVPAEIEKPDWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDRVVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGCHGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFREIGEIVNRHATMSGLSVVRSYCGHGIGDLFHCAPNIPHYARNKAVGVMKAGQTFTI 337 HSP 2 Score: 63.1586 bits (152), Expect = 3.181e-9 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = -1 Query: 304 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILT 447 T EP++ GG TWPD WT VT+DG +AQFEHT+L+T TG E+LT Sbjct: 336 TIEPMINAGGWRDRTWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLT 383
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP1_MYCBO (Methionine aminopeptidase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=map PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 8.856e-61 Identity = 109/235 (46.38%), Postives = 143/235 (60.85%), Query Frame = -3 Query: 944 RPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNES-PGVMVEGQTFTI 1645 R L G +SP PVP+ I +P Y+ E SE + E I +MR A +AA L AG V P VTTD++D++ HE + + GAYPS LGY GFPKS CTS+NE +CHGIPDS + DGDI+NIDVT Y+ G HGDT+ TF GDV+ + LV T E + I K G + IG+ I +A ++GY VV F GHG+GT FH+ ++LH+ + +M G TFTI Sbjct: 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQE-GSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTI 237 HSP 2 Score: 55.8398 bits (133), Expect = 5.066e-7 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = -1 Query: 304 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILT 447 T EP++ LG ++ W D WT VT D AQFEHT+L+T TG EILT Sbjct: 236 TIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT 283
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Match: MAP12_MYCTU (Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=map PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 8.856e-61 Identity = 109/235 (46.38%), Postives = 143/235 (60.85%), Query Frame = -3 Query: 944 RPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNES-PGVMVEGQTFTI 1645 R L G +SP PVP+ I +P Y+ E SE + E I +MR A +AA L AG V P VTTD++D++ HE + + GAYPS LGY GFPKS CTS+NE +CHGIPDS + DGDI+NIDVT Y+ G HGDT+ TF GDV+ + LV T E + I K G + IG+ I +A ++GY VV F GHG+GT FH+ ++LH+ + +M G TFTI Sbjct: 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQE-GSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTI 237 HSP 2 Score: 55.8398 bits (133), Expect = 5.066e-7 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = -1 Query: 304 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILT 447 T EP++ LG ++ W D WT VT D AQFEHT+L+T TG EILT Sbjct: 236 TIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT 283
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Match: R0GQJ7_9BRAS (Methionine aminopeptidase 1 OS=Capsella rubella GN=CARUB_v10009496mg PE=3 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 6.390e-151 Identity = 220/289 (76.12%), Postives = 248/289 (85.81%), Query Frame = -3 Query: 944 FVGFPFTSYASTLHGKQCRSQP-DLVVYSKRVSGLEEALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1807 F+G P TS + +L GK P V +K+VSGLEEA+RIRR EL+ TK RR PPLRRG+VSPRL VPDHIP+PPY+ S +LP+ISSE QI EGIA+MRAACELAARVL+YAGTLV+PSVTT++IDK VH+MI EAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTSKTF CG+V +RLV VTEEC+EKGIAVCK+GASFKKIGKRISEHAEKYGY VVERFVGHGVG VFHS+P+I H+RN+ PG+MVEGQTFTI Sbjct: 33 FIGAPVTSSSLSLSGKNNSYYPRKFYVSAKKVSGLEEAIRIRRMRELETKTKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSKTFFCGEVDESFKRLVKVTEECLEKGIAVCKEGASFKKIGKRISEHAEKYGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTI 321 HSP 2 Score: 83.9593 bits (206), Expect = 4.105e-14 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = -1 Query: 298 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 447 T EPILT+G +C TWPDNWTT+T+DG AAQFEHTILITRTG+EILTKC Sbjct: 320 TIEPILTIGTTKCVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Match: A0A022QRR3_ERYGU (Methionine aminopeptidase 1 OS=Erythranthe guttata GN=MIMGU_mgv1a008750mg PE=3 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 1.631e-150 Identity = 213/290 (73.45%), Postives = 250/290 (86.21%), Query Frame = -3 Query: 944 TLFVGFPFTSYASTLHGKQCRSQPDLVVYSKRVSGLEEALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1813 TL +G P S + ++P LV+ SKR+SGLEE++RIRRE ELQ +T +RRP LRRGKVS RLPVPDHIP PPY++S +LPEI+ EHQIHD EG+ +MRAACELAARV+D+AGTLVRPSVTT++IDK VH+MI +AGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCG+V+ +++LV VTEECM KGI VCKDGA F+KIGK+ISEHAEK+G+GVV+RFVGHG+GT+FHS+P+I HH N+ G MVEGQTFTI Sbjct: 27 TLLMGAPLASRSPCPPYDLKMARP-LVIQSKRLSGLEESIRIRRERELQTSTTSKRRPALRRGKVSQRLPVPDHIPNPPYVASKLLPEIAKEHQIHDMEGLVRMRAACELAARVVDFAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGEVNNAMKKLVKVTEECMYKGIDVCKDGAVFRKIGKKISEHAEKFGFGVVDRFVGHGIGTIFHSEPLIFHHSNDKGGCMVEGQTFTI 315 HSP 2 Score: 83.9593 bits (206), Expect = 3.950e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = -1 Query: 301 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTK 447 T EPILTLG +C TW DNWTT+T+DGSPAAQFEHTILIT+TGAEILTK Sbjct: 314 TIEPILTLGTTDCITWEDNWTTLTADGSPAAQFEHTILITKTGAEILTK 362
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Match: D7KQD8_ARALL (Methionine aminopeptidase 1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471483 PE=3 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 2.438e-150 Identity = 217/289 (75.09%), Postives = 249/289 (86.16%), Query Frame = -3 Query: 944 FVGFPFTSYASTLHGKQCRSQP-DLVVYSKRVSGLEEALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1807 F+G P TS + ++ GK+ P + +K+VSGLEEA+RIR+ EL+ +K RR PPLRRG+VSPRL VPDHIP+PPY+ S +LP+ISSE QI EGIA+MRAACELAARVL+YAGTLVRPSVTT++IDK VH+MI EAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTSKTF CG+V +RLV VTEEC+EKGIAVCKDGASFKKIGKRISEHAEKYGY VVERFVGHGVG +FHS+P+I H+RN+ PG+MVEGQTFTI Sbjct: 33 FIGAPVTSSSLSISGKKNSYSPRKFYISAKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVRPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSKTFFCGEVDEGFKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGYNVVERFVGHGVGPIFHSEPLIYHYRNDEPGLMVEGQTFTI 321 HSP 2 Score: 85.5001 bits (210), Expect = 1.402e-14 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -1 Query: 298 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 447 T EPILT+G EC TWPDNWTT+T+DG AAQFEHTILITRTG+EILTKC Sbjct: 320 TIEPILTIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Match: V4KZQ7_EUTSA (Methionine aminopeptidase 1 OS=Eutrema salsugineum GN=EUTSA_v10007980mg PE=3 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 4.600e-150 Identity = 221/290 (76.21%), Postives = 251/290 (86.55%), Query Frame = -3 Query: 944 FVGFPFTSYAS-TLHGKQCRSQP-DLVVYSKRVSGLEEALRIRRECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1807 F+G PFTSY+S +L GK+ P V +K+VSGLEEA+RIRR EL+ T+K RR PPLRRG+VSPRL VPDHIP+PPY+ S +LP+ISSE QI EGI +M+AACELAARVL++AGTLV+PSVTT++IDK VH+MI EAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTSKTF CG+V +RLV VTEEC+EKGIAVCKDGASFKKIGKRISEHAEKYGY VVERFVGHGVG VFHS+P+I H+RN+ PG MVEGQTFTI Sbjct: 31 FIGAPFTSYSSLSLSGKKQLCPPRKFHVSAKKVSGLEEAIRIRRLRELEATSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIVKMKAACELAARVLNFAGTLVKPSVTTNEIDKAVHDMIVEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSKTFFCGEVDEGFKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGHMVEGQTFTI 320 HSP 2 Score: 85.1149 bits (209), Expect = 1.681e-14 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -1 Query: 298 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 447 T EPILT+G EC TWPDNWTT+T+DG AAQFEHTILITRTG+EILTKC Sbjct: 319 TIEPILTIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 368
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Match: A0A067G308_CITSI (Methionine aminopeptidase 1 OS=Citrus sinensis GN=CISIN_1g017786mg PE=3 SV=1) HSP 1 Score: 449.899 bits (1156), Expect = 8.764e-150 Identity = 216/259 (83.40%), Postives = 238/259 (91.89%), Query Frame = -3 Query: 944 VSGLEEALRIR-RECELQGTTKFRRRPPLRRGKVSPRLPVPDHIPKPPYLSSNILPEISSEHQIHDAEGIAQMRAACELAARVLDYAGTLVRPSVTTDQIDKVVHEMITEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSGPLQRLVTVTEECMEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSQPIILHHRNESPGVMVEGQTFTI 1717 ++ L + L+I RE ELQ TTKFR+RPPLRRG+VSPRLPVPDHIPKPPY+SS LP++S E+QIHD+E IA+MRAACELAARVLD AG LVRPSVTT++IDK VH+MI EAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCG+VS L+RLV VTEEC+EKGIAVCKDGASFKKIGKRISEHAEKYG+GVVERFVGHGVG VFHS+PII H+RNE+PG MVEGQTFTI Sbjct: 5 LTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTI 263 HSP 2 Score: 90.5077 bits (223), Expect = 1.846e-16 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = -1 Query: 298 TAEPILTLGGIECNTWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTKC 447 T EPILT+G IEC TWPDNWTT+T+DG+PAAQFEHTILITRTGAEILT C Sbjct: 262 TIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0091710 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091710 ID=g.barbadense_cottongen_reftransV1_0091710; Name=g.barbadense_cottongen_reftransV1_0091710; organism=Gossypium barbadense; type=contig; length=2097bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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