g.barbadense_cottongen_reftransV1_0094928, g.barbadense_cottongen_reftransV1_0094928 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094928
Unique Nameg.barbadense_cottongen_reftransV1_0094928
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3578
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt07chromosomeg.barbadense_cottongen_reftransV1_0094928:1..3578 .
Dt07:27585889..27589766 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A067H270_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045878mg PE=4 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 4.438e-85
Identity = 143/179 (79.89%), Postives = 157/179 (87.71%), Query Frame = 1
Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            GVSTYLGAAPIV CLE+YQPNV+ITSRVADAALFLAPMVYELGWNWD+LELLAQGSLAGHLLECGCQLTGGYFMHP DK R++SF +LLD SLPYAEIS  G+ICV KAEGSGGILNF TC +QLLYEVGDP+AY+TPDVV+D R V+FQ LS  KVLC  A PS   VP KLL+L+PK
Sbjct:  157 GVSTYLGAAPIVECLEKYQPNVIITSRVADAALFLAPMVYELGWNWDNLELLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDISFQSLLDQSLPYAEISFDGKICVAKAEGSGGILNFRTCGQQLLYEVGDPAAYVTPDVVIDIRDVSFQSLSSHKVLCGRANPSPESVPGKLLRLVPK 335          

HSP 2 Score: 201.83 bits (512), Expect = 9.176e-51
Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3
Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKA--CISAELALPPFQL-EDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + REHVFW+ G K ++V++ +  +VT+    +  ++   P  L E   N C     S EI LS+A SGQKIPLY + HSR+GDKGNDLNFS+IPH P +FE LK+IITP+WVK V+S L + S      AI+K  Q V E  V+VEIYEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLIL Q V+
Sbjct:  456 VGREHVFWQTGLKCSKVADSITQEVTREENLLKTDVVHEPLSLPEASLNICSVDCSSKEIGLSSAPSGQKIPLYTVCHSRSGDKGNDLNFSMIPHFPLDFERLKMIITPRWVKDVVSTLLNTSSFPDSDAINKRDQWVNE-HVKVEIYEVRGIHSLNVVVRNILDGGVNCSRRIDRHGKSISDLILSQQVV 645          

HSP 3 Score: 181.8 bits (460), Expect = 2.807e-44
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 3
Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            MEKQ  + IH+C+IK R++P++R+DKVYIGCGAGFGGDRPMAA KLL  VK+LNY+VLECLAERTLA+R+Q M+  GDGYDS ISEWM LLLPLAV+RGTCIITNMGA
Sbjct:    1 MEKQDSDSIHNCVIKLRVDPKKRRDKVYIGCGAGFGGDRPMAALKLLQSVKQLNYLVLECLAERTLADRFQTMSVSGDGYDSRISEWMRLLLPLAVERGTCIITNMGA 108          

HSP 4 Score: 171.014 bits (432), Expect = 8.012e-41
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 2
Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGE+SYGG+ECVKRA+AAE LVRSWMEE  PGV+  +LSYIIGLDSLK  SI    S+WR SEDIRLRMDGLF+ K HA Q  KEF ALYTNGPAGGGG+
Sbjct:  338 GWKGWGEVSYGGHECVKRARAAEFLVRSWMEEVVPGVNHNILSYIIGLDSLKTASISDDPSSWRTSEDIRLRMDGLFELKDHAVQFTKEFIALYTNGPAGGGGV 441          
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A059C0A4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00177 PE=4 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 7.857e-85
Identity = 136/182 (74.73%), Postives = 162/182 (89.01%), Query Frame = 1
Query: 1162 SLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            S +G+STYLGAAPIV CLE+YQPNV+ITSRVADAALFL PMVYELGWNWDDL LLAQGSLAGHLLECGCQLTGGYFMHP D+ R++S P LLD+SLPYA++S  G + V KA+GSGG+LN  TCA+QLLYE+GDP+AY+TPDVV+D R VTFQPLS++++ C+GAKPSA  VPD+LL+L+PK
Sbjct:  143 SNQGISTYLGAAPIVECLEKYQPNVVITSRVADAALFLGPMVYELGWNWDDLNLLAQGSLAGHLLECGCQLTGGYFMHPGDRYRDISLPCLLDISLPYAKVSCDGGVRVAKADGSGGVLNVSTCAQQLLYEIGDPAAYVTPDVVIDLRDVTFQPLSKNEMRCLGAKPSARSVPDQLLRLLPK 324          

HSP 2 Score: 185.652 bits (470), Expect = 1.576e-45
Identity = 104/191 (54.45%), Postives = 125/191 (65.45%), Query Frame = 3
Query: 2745 ISREHVFWRIGAKQ---TEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE VFW++GAKQ   T+ + HV     K  +       P   + M     +  L S+   S A +G++I LYNIAH RAGDKGNDLNFS+IPHCP + E LK+IITP WVK V+S L + S      A+ K  + V E  V VE+YEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  445 VGRELVFWKVGAKQSMATDSNHHV--GCLKDTVRNHAVRRPINPQ-MAEGNDDGDLMSKSDASPAPAGEEISLYNIAHGRAGDKGNDLNFSIIPHCPTDIERLKMIITPTWVKGVVSSLLNTSSFPDSDALAKRGRWVDE-HVSVEVYEVRGIHSLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQRVV 631          

HSP 3 Score: 165.236 bits (417), Expect = 6.383e-39
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 3
Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            ME+   + I + +IK R+NP+R +D+V IGCGAGFGGDRP AA KLL RV+ LNY+VLECLAERTLA+RYQ M SGGDG+DS ISEWM+LLLPLAV+RG CIITNMGA
Sbjct:    1 MERNVEDGIRNSVIKQRVNPKRLRDEVRIGCGAGFGGDRPFAALKLLQRVEGLNYLVLECLAERTLADRYQEMMSGGDGFDSRISEWMALLLPLAVERGICIITNMGA 108          

HSP 4 Score: 155.221 bits (391), Expect = 9.412e-36
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 2
Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGG+EC+ RAKAAE++VRSW EE  PG++  ++S IIG+DSLKATS+    S + A  DIRLRMDGLF+ K+HA Q  +EFTALYTNGPAGGGGI
Sbjct:  327 GWKGWGEISYGGFECINRAKAAEIMVRSWFEEVIPGLNDRIVSCIIGVDSLKATSLVTGPSAYEAVTDIRLRMDGLFELKEHAFQFVREFTALYTNGPAGGGGI 430          
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: D7UC49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03360 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.761e-84
Identity = 137/179 (76.54%), Postives = 159/179 (88.83%), Query Frame = 1
Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G STYLGAAPIV CLE+YQP+V+ITSRVADAALFL PM+YELGWNWDD+  LAQG LAGHLLECGCQLTGG+FMHP DK R++SFP+LLDLSLP+AE+   G++ + KAEGSGG+LNF TCAEQLLYE+G+P AY+TPDVV+D R V+FQPLSR+KVLCIGAK SA  VPDKLLQL+PK
Sbjct:  157 GKSTYLGAAPIVECLEKYQPDVIITSRVADAALFLGPMIYELGWNWDDINQLAQGCLAGHLLECGCQLTGGFFMHPGDKYRDMSFPHLLDLSLPFAEVGFDGKVYLGKAEGSGGVLNFSTCAEQLLYEIGNPGAYVTPDVVIDVRDVSFQPLSRNKVLCIGAKASADSVPDKLLQLVPK 335          

HSP 2 Score: 188.348 bits (477), Expect = 1.946e-46
Identity = 102/190 (53.68%), Postives = 129/190 (67.89%), Query Frame = 3
Query: 2745 ISREHVFWRIGAKQTEV--SEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE+VFW+ G K  ++  S +    + +  +   +   P  L   Q    ++  SSEI L  A SGQKIPLY++AHSR GDKGNDLNFS+IPH P + E LK+IITP+WVK+ +S L + S      AI+K  + V E  V+VEIYEV GI SLN++VRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  456 VRREYVFWQTGVKHNKMMNSNNQGVGIKEDLLEIHVLQEPALLPTAQEHPSDF-WSSEIDLFPAPSGQKIPLYSVAHSRTGDKGNDLNFSIIPHFPPDIERLKIIITPEWVKAAVSTLLNTSSFPDSDAINKRDKWVAE-HVKVEIYEVKGIHSLNILVRNILDGGVNCSRRIDRHGKTISDLILCQKVV 643          

HSP 3 Score: 186.808 bits (473), Expect = 7.199e-46
Identity = 84/108 (77.78%), Postives = 96/108 (88.89%), Query Frame = 3
Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            M+ +  +E+HDC+IK R+NPQRR +KVYIGCGAGFGGDRP+AA KLL RVKELNY+VLECLAERTLAERYQ M SGGDGYDS IS+WM +LLPLA +RGTCIITNMGA
Sbjct:    1 MDNKDRDEVHDCVIKLRVNPQRRSEKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLECLAERTLAERYQVMVSGGDGYDSRISDWMHVLLPLATERGTCIITNMGA 108          

HSP 4 Score: 178.718 bits (452), Expect = 2.645e-43
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 2
Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPGVS  +LSY+IGLDSLKA S     S W+AS+DIRLRMDGLF++K+HA Q +KEFTALYTNGPAGGGGI
Sbjct:  338 GWKGWGEISYGGYECVKRAKAAEFLVRSWMEEVFPGVSDHILSYVIGLDSLKAASNDDGTSLWKASDDIRLRMDGLFEQKEHAVQFSKEFTALYTNGPAGGGGI 441          
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A059BZK4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00177 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.954e-84
Identity = 136/182 (74.73%), Postives = 162/182 (89.01%), Query Frame = 1
Query: 1162 SLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            S +G+STYLGAAPIV CLE+YQPNV+ITSRVADAALFL PMVYELGWNWDDL LLAQGSLAGHLLECGCQLTGGYFMHP D+ R++S P LLD+SLPYA++S  G + V KA+GSGG+LN  TCA+QLLYE+GDP+AY+TPDVV+D R VTFQPLS++++ C+GAKPSA  VPD+LL+L+PK
Sbjct:  143 SNQGISTYLGAAPIVECLEKYQPNVVITSRVADAALFLGPMVYELGWNWDDLNLLAQGSLAGHLLECGCQLTGGYFMHPGDRYRDISLPCLLDISLPYAKVSCDGGVRVAKADGSGGVLNVSTCAQQLLYEIGDPAAYVTPDVVIDLRDVTFQPLSKNEMRCLGAKPSARSVPDQLLRLLPK 324          

HSP 2 Score: 186.422 bits (472), Expect = 1.193e-45
Identity = 129/302 (42.72%), Postives = 160/302 (52.98%), Query Frame = 3
Query: 2454 IHVRMDGEFLLWLHDLCA*PMMFMFIISCS--------------TGVKKEIFLEKQLVLSVPSSSFK*ILGP*NP*C*T*NCNQANMLLFELLNSCL*MCLCKVICFLST*ISREHVFWRIGAKQ---TEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            I +RMDG F L  H        F F+   +              TG +KEI+L K+LV +           P  P                 + S L + L K +      + RE VFW++GAKQ   T+ + HV     K  +       P   + M     +  L S+   S A +G++I LYNIAH RAGDKGNDLNFS+IPHCP + E LK+IITP WVK V+S L + S      A+ K  + V E  V VE+YEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  395 IRLRMDGLFELKEH-------AFQFVREFTALYTNGPAGGGGICTGHRKEIYLGKELVWNWTPQH------PHEP----------------FIESRLKLVLQKFL------VGRELVFWKVGAKQSMATDSNHHV--GCLKDTVRNHAVRRPINPQ-MAEGNDDGDLMSKSDASPAPAGEEISLYNIAHGRAGDKGNDLNFSIIPHCPTDIERLKMIITPTWVKGVVSSLLNTSSFPDSDALAKRGRWVDE-HVSVEVYEVRGIHSLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQRVV 657          

HSP 3 Score: 165.236 bits (417), Expect = 7.084e-39
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 3
Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            ME+   + I + +IK R+NP+R +D+V IGCGAGFGGDRP AA KLL RV+ LNY+VLECLAERTLA+RYQ M SGGDG+DS ISEWM+LLLPLAV+RG CIITNMGA
Sbjct:    1 MERNVEDGIRNSVIKQRVNPKRLRDEVRIGCGAGFGGDRPFAALKLLQRVEGLNYLVLECLAERTLADRYQEMMSGGDGFDSRISEWMALLLPLAVERGICIITNMGA 108          

HSP 4 Score: 154.836 bits (390), Expect = 1.544e-35
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 2
Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGG+EC+ RAKAAE++VRSW EE  PG++  ++S IIG+DSLKATS+    S + A  DIRLRMDGLF+ K+HA Q  +EFTALYTNGPAGGGGI
Sbjct:  327 GWKGWGEISYGGFECINRAKAAEIMVRSWFEEVIPGLNDRIVSCIIGVDSLKATSLVTGPSAYEAVTDIRLRMDGLFELKEHAFQFVREFTALYTNGPAGGGGI 430          
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A022R4B5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002868mg PE=4 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.298e-84
Identity = 137/178 (76.97%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1174 VSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            VS YLGA+PIV CLERY P+V+ITSRVADA+LFLAPMVYELGWNWD L+LLAQGS+AGHLLECGCQLTGGY+MHP DK+RN+SF NLLDLSLP+AE++  G+ICV KAE SGG+LNF TCAEQLLYE+GDPSAYITPDV++D + VTFQPLS SKVLC+GAKPS   +P KLL L  K
Sbjct:  157 VSVYLGASPIVECLERYTPDVIITSRVADASLFLAPMVYELGWNWDQLQLLAQGSVAGHLLECGCQLTGGYYMHPGDKHRNMSFQNLLDLSLPFAEVTFDGKICVAKAEASGGVLNFNTCAEQLLYEIGDPSAYITPDVIIDIQDVTFQPLSESKVLCLGAKPSPASIPQKLLLLRSK 334          

HSP 2 Score: 168.703 bits (426), Expect = 3.920e-40
Identity = 78/130 (60.00%), Postives = 102/130 (78.46%), Query Frame = 3
Query: 2922 SAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDK-----VQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            +AA +G+KIPLYN+AHSR GDKGNDLNFS+IPH P + E LK+++TP+WVK+++S L D  P +   ++ + + D+     V VEIYEV G+ SLNVVVRN+LDGGVNCSRRIDRHGK +SDL+L Q V+
Sbjct:  499 TAAPAGEKIPLYNVAHSRVGDKGNDLNFSIIPHYPPDIERLKMVLTPEWVKNILSRLLD--PSSFPDSRDIERRDEWVNGNVGVEIYEVRGVHSLNVVVRNVLDGGVNCSRRIDRHGKTVSDLVLSQQVV 626          

HSP 3 Score: 162.155 bits (409), Expect = 5.157e-38
Identity = 74/101 (73.27%), Postives = 87/101 (86.14%), Query Frame = 3
Query:  210 EIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            E HDC++K R+NP+RRK+KV +GCGAGFGGDRP+AA KLL RV+EL+Y+VLECLAERTLAER  A+ SGG GYD  ISEWM LLLPLA++RG  IITNMGA
Sbjct:   10 ETHDCVVKLRLNPRRRKEKVVVGCGAGFGGDRPIAALKLLQRVEELDYLVLECLAERTLAERSSALKSGGKGYDPRISEWMELLLPLAIERGVRIITNMGA 110          

HSP 4 Score: 155.606 bits (392), Expect = 5.393e-36
Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 2
Query: 1937 VTDITSLGLMSSKVVSMHSNLSCF-----------QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            + D+T   L  SKV+ + +  S             +  GWKGWGEISYGGY  ++RAKAAE LVR+W+EE +PG S+ ++SYIIGLDSLK TS    LS+ + SEDIRLRMDGLF++++HA QL KEFTALYTNGPAGGGGI
Sbjct:  299 IQDVTFQPLSESKVLCLGAKPSPASIPQKLLLLRSKDNGWKGWGEISYGGYASIQRAKAAEFLVRAWVEELYPGTSNKIVSYIIGLDSLK-TSCVEDLSS-KTSEDIRLRMDGLFEKEEHAIQLTKEFTALYTNGPAGGGGI 438          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067H270_CITSI4.438e-8579.89Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A059C0A4_EUCGR7.857e-8574.73Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
D7UC49_VITVI1.761e-8476.54Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A059BZK4_EUCGR2.954e-8474.73Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A022R4B5_ERYGU3.298e-8476.97Uncharacterized protein OS=Erythranthe guttata GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010839Acyclic terpene utilisationPFAMPF07287DUF1446coord: 59..226
e-value: 2.2E-58
score: 197.5
NoneNo IPR availablePANTHERPTHR13943HRAS-LIKE SUPPRESSOR - RELATEDcoord: 53..236
NoneNo IPR availablePANTHERPTHR13943:SF48SUBFAMILY NOT NAMEDcoord: 53..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094928 ID=g.barbadense_cottongen_reftransV1_0094928; Name=g.barbadense_cottongen_reftransV1_0094928; organism=Gossypium barbadense; type=contig; length=3578bp
CCTGCCTGATCTTATTGTATTTATTTAGTTATCATCATAATTATTAAGAA
CCCAGACTTCGTTTATCAGATTCTAATCAAGCAACTGATCGGTTTGATTA
CAGGGGAGAGCTATAATTTAGATTCCGGAGAAGAAAACTCGGCGGCGAGA
CAATTTCTCAACTCTTTTACATTGAATCTAAGATATCAATGGAAAAACAG
ACCTACGAAGAAATTCATGACTGCCTGATCAAGCCGAGAATCAATCCTCA
AAGAAGAAAAGACAAAGTTTATATTGGCTGTGGAGCTGGGTTCGGTGGTG
ACCGGCCAATGGCAGCTAAAAAATTGCTTAACAGAGTCAAAGAGCTGAAT
TATATTGTTCTTGAATGTTTAGCAGAACGTACTCTTGCAGAACGATACCA
GGCTATGGCGTCCGGCGGTGATGGCTATGATTCTAATATTTCAGAATGGA
TGTCTCTGCTACTACCTTTGGCTGTGGATAGGGGAACTTGTATAATTACC
AACATGGGTGCAAGTATGAGAATTTGAAAACATCGTTTCAAATTTTGAGT
TGTCTGCCAAATTTCACCAAATGCTTTGTGCTGATGTTCAAAGTTGTGTT
TGATCTTTTCTTTTCATACTGAGCATATTGATTCTTTCCTGGATAGTGGA
TCCGGTCAGTGCTCGAGAAAAGGTTTTAGAAGTTGCCAGCAGTCTTGGGA
TTCGTTTGTCTGTTGCTGTGGCTCATGAGGTCTTTGTTAATGAATCGGGT
ATGCTCATCAAGTTAGCCCCTTTTAAATTTAAGTTAATCATGTATGAGAA
TTTTGCTGGTGAGTTCAGATAACTGACAATTGTATGATCTTCATTTTAGA
AACTATAGTCAGTATATTGTTGTGTGCAATTCAGAATTTTCATTCATTGT
GTTTAGCAATATTCTTGGACTCCAAATGAGAAATATTTTTAAATATTCAG
GTTCAGGATCCTTGCCTGAGAAGCTGGTTAACATGGAAGGTGTAAGAATC
TGGTACTCCTTTGCATGTACCGTTCATTGGCCTTTTGTATCTTCTTTTTG
GTTTCACATAAAAGGATTAATGATCTGGTTTTCATCTGCATGTACGTTTT
TTCATCTTTAGTTATGAAATTTCATGAGAAATGCAAACTCTTGAGCTCTA
TCTTGTTTAATTCTTTGAAGGGTGTTAGCACATATCTGGGAGCAGCCCCA
ATAGTCGCATGTCTAGAGAGATACCAACCAAATGTTTTAATTACTTCAAG
GGTCGCTGATGCCGCACTATTCTTAGCACCAATGGTTTACGAATTGGGCT
GGAATTGGGATGACTTGGAGCTATTAGCACAGGGATCTCTGGCAGGACAC
CTTCTAGAGTGTGGTTGTCAACTCACAGGGGGATACTTCATGCATCCAGC
GGACAAGAACCGAAACTTGTCTTTCCCAAATCTCCTGGATCTATCACTGC
CATATGCTGAAATTTCATCAAGTGGGGAAATATGTGTCATGAAAGCAGAA
GGTAGTGGCGGGATTTTAAATTTCGGCACTTGTGCTGAACAACTACTTTA
TGAGGTTGGAGATCCAAGTGCTTACATTACACCTGATGTTGTAGTTGATT
TTCGGGGTGTTACATTTCAGCCATTATCTAGATCTAAAGTTCTCTGTATT
GGTGCAAAGCCATCTGCTCATCCTGTTCCTGATAAACTTTTGCAGTTGAT
TCCGAAGGTAACCTTCTATCCTGAAGGTAATATTTAGCTTTAAGGACTGT
TCTTTTTTCTTAGCTTCAGTCCTGCAGCAGATGGCTTGTAGGTATTTCAA
CAAAGCGTCTATTTCCATATTTCTGAATAAAGCATGTATTCTCTCTTCAC
TCTATGATTGAGGGAACCCCGTTGTTACCTCGTTGCAGCCCCTGTCCCCC
GCCTCCCCTCCCTCTAGTTATCTCAATTATTTTCTAGTCACAGATATTAC
TTCATTGGGTCTAATGTCTTCTAAGGTTGTCTCTATGCATTCTAATTTAT
CTTGTTTCCAGCACCGTGGATGGAAAGGATGGGGTGAGATATCATATGGA
GGATATGAATGTGTCAAACGTGCAAAAGCTGCTGAACTTCTTGTTAGGTC
ATGGATGGAAGAGGCATTTCCTGGTGTCAGTTCCTGTGTTCTTTCTTATA
TAATTGGACTGGATAGCTTGAAAGCTACCAGCATTGGTCACCATCTATCG
ACATGGAGAGCCAGTGAAGACATTCGGCTACGCATGGATGGACTATTCCA
GGAGAAGAAACACGCACAGCAACTTGCTAAAGAGTTTACTGCATTATATA
CAAATGGACCGGCCGGCGGTGGTGGTATCAGGTATATTTCCTCCTAATTT
TATATCTATGGTATGTACCATATATATGTACGAAAAACTAAATGCCAATA
GTGAATGTGTAAAGTTCTCTGGTTCTGGATAATGGCAATGGTTCATATGC
TGTATTCATGTACGCATGGATGGCGAGTTTCTTCTTTGGCTCCATGATCT
TTGTGCCTAACCTATGATGTTTATGTTTATCATCTCATGCAGCACTGGTG
TCAAGAAGGAAATTTTTCTGGAAAAACAGTTGGTACTCTCCGTTCCCTCT
TCTTCCTTTAAATAAATTCTTGGTCCTTGAAATCCTTAATGTTGAACTTG
AAACTGTAATCAGGCCAACATGTTGTTGTTCGAACTATTGAATTCATGTT
TATGAATGTGCTTATGCAAAGTAATCTGTTTCCTTTCTACTTAGATCAGT
CGAGAACATGTTTTCTGGCGGATAGGGGCAAAGCAAACAGAAGTCAGTGA
ACATGTCTTTGCAGATGTTACAAAGGCCTGCATTTCAGCTGAACTGGCAT
TGCCACCATTTCAACTAGAAGATATGCAGAACTCTTGCCTAGAATATGGT
TTGTCATCGGAAATCAGCCTCTCAGCAGCTCAGTCTGGTCAAAAGATTCC
ACTCTATAATATAGCCCACAGTAGGGCTGGAGATAAAGGAAACGACTTAA
ACTTCTCCGTCATCCCACACTGTCCGCAGAACTTTGAGATGCTGAAGCTT
ATCATAACACCCCAGTGGGTTAAGAGTGTGATCTCAGTCCTTCCGGATGC
ATCTCCAAAGGCCATTGATAAGACAAAACAATTGGTGAAGGAAGATAAAG
TACAGGTGGAAATCTATGAAGTCCATGGAATTCAGTCTTTAAATGTGGTG
GTTCGTAACATTCTCGATGGTGGTGTCAATTGCTCTCGAAGGATCGATCG
CCATGGAAAGTGCATCTCGGATCTTATCTTGTGTCAACATGTGTTACCTA
AGTTTTAATTACAATTCAACTTTAAAATTTTTTAATAATCGAAAATTTGT
CTGATATAATATAATATTACACTACATGTTCATATGTCAGCTTATGGGGA
TTGGGTATTATTTCCTTCTTATATTAAATGCGAATGAAGCTTATTTGAGA
GTAAGAATATAGGTATTAAAACAAAAATGACGAAAGTTGAAACACTGAAA
GATAATGCACTTCAGTGGATTCAAACCCACATCCTATTGTATTAGTAACA
ATATTTATTTCAATCGAGTTAAGACTTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR010839AtuA