g.barbadense_cottongen_reftransV1_0094928, g.barbadense_cottongen_reftransV1_0094928 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094928
Unique Name	g.barbadense_cottongen_reftransV1_0094928
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3578

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Dt07	chromosome	g.barbadense_cottongen_reftransV1_0094928:1..3578 . Dt07:27585889..27589766 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: B9GPY9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15880g PE=4 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 7.008e-88
Identity = 144/179 (80.45%), Postives = 161/179 (89.94%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G+STYLGAAPIV CLE+YQP+V+ITSRVADAALFLAPMVYELGWNW+DLE LAQGS+AGHLLECGCQLTGGYFMHP DK R++SFP+LLDLSLPYAEIS  G +CV KAEGSGG+LNF TCA+QLLYEVGDP AYITPDVV+DFR V+F  LS  KVLC GAKPS + VPD+LL+LIPK
Sbjct:  157 GISTYLGAAPIVECLEKYQPDVVITSRVADAALFLAPMVYELGWNWNDLEELAQGSMAGHLLECGCQLTGGYFMHPGDKYRDISFPSLLDLSLPYAEISFDGSLCVAKAEGSGGVLNFSTCAQQLLYEVGDPGAYITPDVVIDFRNVSFHSLSAHKVLCAGAKPSVNSVPDELLRLIPK 335

HSP 2 Score: 177.178 bits (448), Expect = 8.069e-43
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 3

Query:  192 EKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            E Q   EIH+C+IK R  P++R++KVYIGCGAGFGGDRP+AA KLL RVKELNYIVLECLAERTLA+RYQ M SGGDGYDS I++WM LLLPLAV+RGTCIITNMGA
Sbjct:    3 EDQDGNEIHNCVIKLREKPKKRREKVYIGCGAGFGGDRPIAALKLLQRVKELNYIVLECLAERTLADRYQIMISGGDGYDSRITDWMRLLLPLAVERGTCIITNMGA 109

HSP 3 Score: 176.407 bits (446), Expect = 1.660e-42
Identity = 101/194 (52.06%), Postives = 119/194 (61.34%), Query Frame = 3

Query: 2745 ISREHVFWRIGAK-----QTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDK-----VQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE VFW  G K     +    E    ++ K  I            D  +       S  I  S A SGQKIPLY++AHSR GDKGND+NFS+IPH P + E LKLIITPQWVK V+S L + S  +   +   +K DK     V VEIYEV GI+SLN+VVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  456 VERESVFWWTGVKSWKGMRPNKEEVDLGNLVKTTI----------WHDPLSPPHPKSSSPVIETSPAPSGQKIPLYSVAHSRVGDKGNDMNFSIIPHFPSDIERLKLIITPQWVKEVVSTLLNTS--SFPDSVSTMKRDKWVSEHVNVEIYEVKGIKSLNIVVRNILDGGVNCSRRIDRHGKTISDLILCQKVV 637

HSP 4 Score: 164.081 bits (414), Expect = 1.364e-38
Identity = 80/104 (76.92%), Postives = 85/104 (81.73%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPGVS  V SYIIGLDSLK  SI  +  +  A EDIRLRMDGLF+ K+HA Q   EFTALYTNGPAGGGG+
Sbjct:  338 GWKGWGEISYGGYECVKRAKAAEYLVRSWMEEVFPGVSCNVASYIIGLDSLKTISIHDNNISCGACEDIRLRMDGLFELKEHAVQFETEFTALYTNGPAGGGGV 441

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V7AN02_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G096000g PE=4 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.597e-87
Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIP 1704
            G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP D+ R++SF  LLDLSLP+AEI   G++CV KAEGSGG+LN  TCAEQLLYEVGDP+AY+TPDVV++F+ V+F PLS S+VLC+GAKPS   VPD+LLQL+P
Sbjct:  164 GISTYLGAAPIVRCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDQYRDMSFLQLLDLSLPFAEICFDGQVCVAKAEGSGGVLNLSTCAEQLLYEVGDPAAYVTPDVVINFQDVSFSPLSSSRVLCLGAKPSTVSVPDQLLQLVP 341

HSP 2 Score: 185.652 bits (470), Expect = 1.407e-46
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 3

Query:  174 ESKISMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            E  + ME Q  EEIH+ LIK R NPQRR+DKVY+GCGAGFGGDRP+AA KLL RV+ELNY+VLECLAERTL +RYQ M SGGDGYDS IS WMS+LLPLA++RGTCIITNMGA
Sbjct:    3 EEVVVMEPQDEEEIHNSLIKLRSNPQRRRDKVYVGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLVDRYQIMMSGGDGYDSQISSWMSMLLPLALERGTCIITNMGA 115

HSP 3 Score: 164.851 bits (416), Expect = 1.443e-39
Identity = 78/105 (74.29%), Postives = 87/105 (82.86%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGIR 2332
            GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPG++  +LSYIIG DSLKATS   +  +   SEDIRLRMDGLF++K+ A Q  +EF ALYTNGPAGGGGIR
Sbjct:  345 GWKGWGEISYGGYECVKRAKAAEYLVRSWMEEIFPGLNHRILSYIIGFDSLKATSSNGNEHSQITSEDIRLRMDGLFEQKEQALQFTREFIALYTNGPAGGGGIR 449

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V4TXM5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019238mg PE=4 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.882e-87
Identity = 143/179 (79.89%), Postives = 157/179 (87.71%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            GVSTYLGAAPIV CLE+YQPNV+ITSRVADAALFLAPMVYELGWNWD+LELLAQGSLAGHLLECGCQLTGGYFMHP DK R++SF +LLD SLPYAEIS  G+ICV KAEGSGGILNF TC +QLLYEVGDP+AY+TPDVV+D R V+FQ LS  KVLC  A PS   VP KLL+L+PK
Sbjct:  157 GVSTYLGAAPIVECLEKYQPNVIITSRVADAALFLAPMVYELGWNWDNLELLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDISFQSLLDQSLPYAEISFDGKICVAKAEGSGGILNFRTCGQQLLYEVGDPAAYVTPDVVIDIRDVSFQSLSSHKVLCGRANPSPESVPGKLLRLVPK 335

HSP 2 Score: 183.726 bits (465), Expect = 7.033e-46
Identity = 83/108 (76.85%), Postives = 97/108 (89.81%), Query Frame = 3

Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            MEKQ  + IH+C+IK R++P++R+DKVYIGCGAGFGGDRPMAA KLL  VK+LNY+VLECLAERTLA+R+Q M+ GGDGYDS ISEWM LLLPLAV+RGTCIITNMGA
Sbjct:    1 MEKQDSDSIHNCVIKLRVDPKKRRDKVYIGCGAGFGGDRPMAALKLLQSVKQLNYLVLECLAERTLADRFQTMSVGGDGYDSRISEWMRLLLPLAVERGTCIITNMGA 108

HSP 3 Score: 170.629 bits (431), Expect = 1.927e-41
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGE+SYGG+ECVKRA+AAE LVRSWMEE  PGV+  +LSYIIGLDSLK  SI    S+WR SEDIRLRMDGLF+ K HA Q  KEF ALYTNGPAGGGG+
Sbjct:  338 GWKGWGEVSYGGHECVKRARAAEFLVRSWMEEVVPGVNHNILSYIIGLDSLKTASISDDPSSWRTSEDIRLRMDGLFELKDHAVQFTKEFIALYTNGPAGGGGV 441

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0B2PAL1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021951 PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.124e-86
Identity = 141/179 (78.77%), Postives = 159/179 (88.83%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP DK R++SF  LLDLSLPYAEI   G++CV K+EGSGG+LNF TCAEQLLYEVGDP AY+TPDVV+DF+ V+F PLS S+V C GAKPS   VPDKLLQL+P+
Sbjct:  158 GISTYLGAAPIVHCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDMSFQQLLDLSLPYAEICFDGQVCVSKSEGSGGVLNFNTCAEQLLYEVGDPGAYVTPDVVIDFQDVSFLPLSSSRVCCHGAKPSTISVPDKLLQLVPQ 336

HSP 2 Score: 185.652 bits (470), Expect = 1.741e-45
Identity = 109/189 (57.67%), Postives = 129/189 (68.25%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDK-----VQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE VFWR G K++  S+          +   L LPP +L+   +  LE  +S   S S A SGQKIPLY++AHSRAGDKGND+NFS+IPH P ++E LKLIIT QWVKSV+S L D S       K  +  DK     V+VEIYEV GIQSLN+VVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  457 VKREDVFWRTGIKRSTRSQSNKVVDPDHNLRHILTLPP-KLQAETDKSLE-SVSLGSSCSPAPSGQKIPLYSVAHSRAGDKGNDINFSLIPHFPPDYERLKLIITSQWVKSVVSNLLDLSLSPDLDAK--IPRDKRVNENVKVEIYEVKGIQSLNIVVRNILDGGVNCSRRIDRHGKTISDLILCQQVV 641

HSP 3 Score: 183.341 bits (464), Expect = 8.935e-45
Identity = 84/108 (77.78%), Postives = 96/108 (88.89%), Query Frame = 3

Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            ME Q  EEIH+CLIK R NP+RR+DKVYIGCGAGFGGD+P+AA KLL RV+ELNY+VLECLAERTLA+RYQ M SGGDGYDS IS W+ +LLPLA++RGTCIITNMGA
Sbjct:    1 MEPQDEEEIHNCLIKLRSNPERRRDKVYIGCGAGFGGDKPLAALKLLQRVQELNYLVLECLAERTLADRYQIMMSGGDGYDSQISNWIHMLLPLALERGTCIITNMGA 108

HSP 4 Score: 162.925 bits (411), Expect = 3.084e-38
Identity = 85/140 (60.71%), Postives = 98/140 (70.00%), Query Frame = 2

Query: 1943 DITSLGLMSSKVVSMHSNLSCF-----------QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            D++ L L SS+V    +  S             Q  GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPG++  +LSYIIG DSLKATS   + S+   SED RLRMDGLF++K+ A Q  +EF ALYTNGPAGGGGI
Sbjct:  303 DVSFLPLSSSRVCCHGAKPSTISVPDKLLQLVPQDCGWKGWGEISYGGYECVKRAKAAEYLVRSWMEEIFPGLNHRILSYIIGFDSLKATSGNGNESSQTTSEDNRLRMDGLFEQKEQAIQFTREFIALYTNGPAGGGGI 442

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: K7L083_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.245e-86
Identity = 141/179 (78.77%), Postives = 159/179 (88.83%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP DK R++SF  LLDLSLPYAEI   G++CV K+EGSGG+LNF TCAEQLLYEVGDP AY+TPDVV+DF+ V+F PLS S+V C GAKPS   VPDKLLQL+P+
Sbjct:  158 GISTYLGAAPIVRCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDMSFQQLLDLSLPYAEICFDGQVCVSKSEGSGGVLNFNTCAEQLLYEVGDPGAYVTPDVVIDFQDVSFLPLSSSRVCCHGAKPSTISVPDKLLQLVPQ 336

HSP 2 Score: 183.341 bits (464), Expect = 8.935e-45
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 3

Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            ME    EEIH+CLIK R NP+RR+DKVYIGCGAGFGGD+P+AA KLL RV+ELNY+VLECLAERTLA+RYQ M SGGDGYDS IS WM +LLPLA++RGTCIITNMGA
Sbjct:    1 MEPHDEEEIHNCLIKLRSNPERRRDKVYIGCGAGFGGDKPLAALKLLQRVQELNYLVLECLAERTLADRYQIMMSGGDGYDSQISNWMHMLLPLALERGTCIITNMGA 108

HSP 3 Score: 182.956 bits (463), Expect = 1.387e-44
Identity = 109/189 (57.67%), Postives = 128/189 (67.72%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDK-----VQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE VFWR G K++  S+          +   L LPP +L+   +  LE  +S   S S A SGQKIPLY++AHSRAGDKGND+NFS+IPH P + E LKLIIT QWVKSV+S L D S       K  +  DK     V+VEIYEV GIQSLN+VVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  457 VKREDVFWRTGIKRSTRSQSNKVVDPDHNLRHILTLPP-KLQAETDKSLE-SVSLGSSCSPAPSGQKIPLYSVAHSRAGDKGNDINFSLIPHFPPDNERLKLIITSQWVKSVVSNLLDLSLSPDLDAK--IPRDKWVNENVKVEIYEVKGIQSLNIVVRNILDGGVNCSRRIDRHGKTISDLILCQQVV 641

HSP 4 Score: 162.54 bits (410), Expect = 3.946e-38
Identity = 85/140 (60.71%), Postives = 98/140 (70.00%), Query Frame = 2

Query: 1943 DITSLGLMSSKVVSMHSNLSCF-----------QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            D++ L L SS+V    +  S             Q  GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPG++  +LSYIIG DSLKATS   + S+   SED RLRMDGLF++K+ A Q  +EF ALYTNGPAGGGGI
Sbjct:  303 DVSFLPLSSSRVCCHGAKPSTISVPDKLLQLVPQDCGWKGWGEISYGGYECVKRAKAAEYLVRSWMEEIFPGLNHRILSYIIGFDSLKATSGNGNESSQTTSEDNRLRMDGLFEQKEQAIQFTREFIALYTNGPAGGGGI 442

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BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A5BP01_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006289 PE=4 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 6.804e-86
Identity = 140/184 (76.09%), Postives = 163/184 (88.59%), Query Frame = 1

Query: 1156 FNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            F S+KG STYLGAAPIV CLE+YQP+V+ITSRVADAALFL PM+YELGWNWDD+  LAQG LAGHLLECGCQLTGG+FMHP DK R++SFP+LLDLSLP+AE+   G++ + KAEGSGG+LNF TCAEQLLYE+G+P AY+TPDVV+D R V+FQPLSR+KVLCIGAK SA  VPDKLLQL+PK
Sbjct:  211 FXSMKGKSTYLGAAPIVECLEKYQPDVIITSRVADAALFLGPMIYELGWNWDDINQLAQGCLAGHLLECGCQLTGGFFMHPGDKYRDMSFPHLLDLSLPFAEVGFDGKVYLGKAEGSGGVLNFSTCAEQLLYEIGNPGAYVTPDVVIDVRDVSFQPLSRNKVLCIGAKASADSVPDKLLQLVPK 394

HSP 2 Score: 190.66 bits (483), Expect = 6.313e-47
Identity = 103/190 (54.21%), Postives = 129/190 (67.89%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEV--SEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + REHVFW+ G K  ++  S +    + +  +   +   P  L   Q    ++  SSEI L  A SGQKIPLY++AHSR GDKGNDLNFS+IPH P + E LK+IITP+WVK+ +S L + S      AI+K  + V E  V+VEIYEV GI SLN++VRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  515 VRREHVFWQTGVKHNKMMNSNNQGVGIKEDLLEIHVLQEPALLPTAQEHPSDF-WSSEIDLFPAPSGQKIPLYSVAHSRTGDKGNDLNFSIIPHFPPDIERLKIIITPEWVKAAVSTLLNTSSFPDSDAINKRDKWVAE-HVKVEIYEVKGIHSLNILVRNILDGGVNCSRRIDRHGKTISDLILCQKVV 702

HSP 3 Score: 181.8 bits (460), Expect = 3.941e-44
Identity = 85/115 (73.91%), Postives = 97/115 (84.35%), Query Frame = 3

Query:  186 SMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNI------SEWMSLLLPLAVDRGTCIITNMGA 512
            SM+ +  +E+HDC+IK R+NPQRR +KVYIGCGAGFGGDRP+AA KLL RVKELNY+VLECLAERTLAERYQ M SGGDGYDS I      S+WM +LLPLA +RGTCIITNMGA
Sbjct:   24 SMDNKDRDEVHDCVIKLRVNPQRRSEKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLECLAERTLAERYQVMVSGGDGYDSRIFNDDAVSDWMHVLLPLATERGTCIITNMGA 138

HSP 4 Score: 176.407 bits (446), Expect = 2.619e-42
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FP VS  +LSY+IGLDSLKA S     S W+AS+DIRLRMDGLF++K+HA Q +KEFTALYTNGPAGGGGI
Sbjct:  397 GWKGWGEISYGGYECVKRAKAAEFLVRSWMEEVFPXVSDHILSYVIGLDSLKAASNDDGTSLWKASDDIRLRMDGLFEQKEHAVQFSKEFTALYTNGPAGGGGI 500

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A072TQ15_MEDTR (Propionyl-CoA carboxylase, putative OS=Medicago truncatula GN=MTR_8g031480 PE=4 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 9.016e-86
Identity = 140/179 (78.21%), Postives = 160/179 (89.39%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G+STYLGA+PIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP +K R++SF  LLDLSLPYAEIS  G++ V KAEGSGG+L+F TCAEQLLYE+GDPSAY+TPDVV+DF+ V+F PLS  +VLC GAKPS   VPDKLLQL+PK
Sbjct:  162 GISTYLGASPIVHCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGEKYRDMSFQQLLDLSLPYAEISFDGQVSVAKAEGSGGVLDFNTCAEQLLYEIGDPSAYVTPDVVIDFQDVSFLPLSSCRVLCSGAKPSTISVPDKLLQLVPK 340

HSP 2 Score: 186.422 bits (472), Expect = 1.049e-45
Identity = 86/109 (78.90%), Postives = 97/109 (88.99%), Query Frame = 3

Query:  186 SMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            +ME    EEIH+CLI+ R NP+RR+DKVYIGCGAGFGGDRP+AA KLL RVKELNY+VLECLAERTLAERYQ M SGGDGYDS IS WM++LLPLA++RGTCIITNMGA
Sbjct:    5 AMEAHDGEEIHNCLIELRSNPKRRRDKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLECLAERTLAERYQIMLSGGDGYDSQISSWMNMLLPLALERGTCIITNMGA 113

HSP 3 Score: 174.866 bits (442), Expect = 4.985e-42
Identity = 99/187 (52.94%), Postives = 123/187 (65.78%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVI----SVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHV 3293
            + RE VFWRIG K+   S+       +  +     L P    +   S  E+ +S   S + A  GQKIPLYN+AHSRAGDKGND+NFS+IPH P + + LK IIT QWVKSV+     + P     A ++  + + E+ V+VEIYEV GIQSLN+VVRN+LDGGVNCSRRIDRHGK ISDLILCQ V
Sbjct:  465 VRREDVFWRIGLKRNTKSQSNKVLDHEYNLKNISTLQPKSQAETDESSSEF-VSPGRSYTPAPLGQKIPLYNVAHSRAGDKGNDINFSLIPHFPPDIKRLKQIITSQWVKSVVSPLLDLSPSLDLDARNQRDKWISEN-VKVEIYEVKGIQSLNIVVRNVLDGGVNCSRRIDRHGKTISDLILCQQV 649

HSP 4 Score: 160.229 bits (404), Expect = 2.602e-37
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGY+CV+RAKAAE LVRSWMEE FPG+   ++SYIIG DSLKA S   + S    +EDIRLRMDGLF+++ HA Q  +EFTALYTNGPAGGGGI
Sbjct:  343 GWKGWGEISYGGYKCVERAKAAEYLVRSWMEEIFPGLHDHIVSYIIGYDSLKAASSNGNASRQTTTEDIRLRMDGLFEQRDHAVQFTREFTALYTNGPAGGGGI 446

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A072TN59_MEDTR (Propionyl-CoA carboxylase, putative OS=Medicago truncatula GN=MTR_8g031480 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.246e-85
Identity = 140/179 (78.21%), Postives = 160/179 (89.39%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            G+STYLGA+PIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP +K R++SF  LLDLSLPYAEIS  G++ V KAEGSGG+L+F TCAEQLLYE+GDPSAY+TPDVV+DF+ V+F PLS  +VLC GAKPS   VPDKLLQL+PK
Sbjct:  162 GISTYLGASPIVHCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGEKYRDMSFQQLLDLSLPYAEISFDGQVSVAKAEGSGGVLDFNTCAEQLLYEIGDPSAYVTPDVVIDFQDVSFLPLSSCRVLCSGAKPSTISVPDKLLQLVPK 340

HSP 2 Score: 186.037 bits (471), Expect = 1.149e-45
Identity = 86/109 (78.90%), Postives = 97/109 (88.99%), Query Frame = 3

Query:  186 SMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            +ME    EEIH+CLI+ R NP+RR+DKVYIGCGAGFGGDRP+AA KLL RVKELNY+VLECLAERTLAERYQ M SGGDGYDS IS WM++LLPLA++RGTCIITNMGA
Sbjct:    5 AMEAHDGEEIHNCLIELRSNPKRRRDKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLECLAERTLAERYQIMLSGGDGYDSQISSWMNMLLPLALERGTCIITNMGA 113

HSP 3 Score: 174.866 bits (442), Expect = 4.526e-42
Identity = 99/187 (52.94%), Postives = 123/187 (65.78%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVI----SVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHV 3293
            + RE VFWRIG K+   S+       +  +     L P    +   S  E+ +S   S + A  GQKIPLYN+AHSRAGDKGND+NFS+IPH P + + LK IIT QWVKSV+     + P     A ++  + + E+ V+VEIYEV GIQSLN+VVRN+LDGGVNCSRRIDRHGK ISDLILCQ V
Sbjct:  461 VRREDVFWRIGLKRNTKSQSNKVLDHEYNLKNISTLQPKSQAETDESSSEF-VSPGRSYTPAPLGQKIPLYNVAHSRAGDKGNDINFSLIPHFPPDIKRLKQIITSQWVKSVVSPLLDLSPSLDLDARNQRDKWISEN-VKVEIYEVKGIQSLNIVVRNVLDGGVNCSRRIDRHGKTISDLILCQQV 645

HSP 4 Score: 160.229 bits (404), Expect = 2.305e-37
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGY+CV+RAKAAE LVRSWMEE FPG+   ++SYIIG DSLKA S   + S    +EDIRLRMDGLF+++ HA Q  +EFTALYTNGPAGGGGI
Sbjct:  343 GWKGWGEISYGGYKCVERAKAAEYLVRSWMEEIFPGLHDHIVSYIIGYDSLKAASSNGNASRQTTTEDIRLRMDGLFEQRDHAVQFTREFTALYTNGPAGGGGI 446

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V7AS45_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G096000g PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.135e-85
Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIP 1704
            G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP D+ R++SF  LLDLSLP+AEI   G++CV KAEGSGG+LN  TCAEQLLYEVGDP+AY+TPDVV++F+ V+F PLS S+VLC+GAKPS   VPD+LLQL+P
Sbjct:  164 GISTYLGAAPIVRCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDQYRDMSFLQLLDLSLPFAEICFDGQVCVAKAEGSGGVLNLSTCAEQLLYEVGDPAAYVTPDVVINFQDVSFSPLSSSRVLCLGAKPSTVSVPDQLLQLVP 341

HSP 2 Score: 186.037 bits (471), Expect = 1.336e-45
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 3

Query:  174 ESKISMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            E  + ME Q  EEIH+ LIK R NPQRR+DKVY+GCGAGFGGDRP+AA KLL RV+ELNY+VLECLAERTL +RYQ M SGGDGYDS IS WMS+LLPLA++RGTCIITNMGA
Sbjct:    3 EEVVVMEPQDEEEIHNSLIKLRSNPQRRRDKVYVGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLVDRYQIMMSGGDGYDSQISSWMSMLLPLALERGTCIITNMGA 115

HSP 3 Score: 185.652 bits (470), Expect = 1.781e-45
Identity = 104/189 (55.03%), Postives = 126/189 (66.67%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYG-LSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVIS----VLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + RE VFWR G K+  VS+       +      L        ++  S  E+  L S  S S A SGQKIPLY +AHSRAGDKGND+NFS+IPH P ++  LKLI+TPQWVKSV+S    +   +   A ++T + V E+ V VEIYEV GIQSLN+VVRNILDGGVNCSRRIDRHGK ISDLILCQ V+
Sbjct:  463 VKREEVFWRTGVKRNTVSQSNKVVNPEYNPRHTLTQAAKLQSEIDKSSSEFAVLGSSCSHSPAPSGQKIPLYKVAHSRAGDKGNDINFSLIPHFPLDYTRLKLIVTPQWVKSVVSHLLDLSLSSDLDAKNQTDKRVNEN-VIVEIYEVKGIQSLNIVVRNILDGGVNCSRRIDRHGKTISDLILCQQVV 650

HSP 4 Score: 163.31 bits (412), Expect = 2.471e-38
Identity = 77/104 (74.04%), Postives = 86/104 (82.69%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPG++  +LSYIIG DSLKATS   +  +   SEDIRLRMDGLF++K+ A Q  +EF ALYTNGPAGGGGI
Sbjct:  345 GWKGWGEISYGGYECVKRAKAAEYLVRSWMEEIFPGLNHRILSYIIGFDSLKATSSNGNEHSQITSEDIRLRMDGLFEQKEQALQFTREFIALYTNGPAGGGGI 448

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V4TDD4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019238mg PE=4 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 4.270e-85
Identity = 143/179 (79.89%), Postives = 157/179 (87.71%), Query Frame = 1

Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707
            GVSTYLGAAPIV CLE+YQPNV+ITSRVADAALFLAPMVYELGWNWD+LELLAQGSLAGHLLECGCQLTGGYFMHP DK R++SF +LLD SLPYAEIS  G+ICV KAEGSGGILNF TC +QLLYEVGDP+AY+TPDVV+D R V+FQ LS  KVLC  A PS   VP KLL+L+PK
Sbjct:  157 GVSTYLGAAPIVECLEKYQPNVIITSRVADAALFLAPMVYELGWNWDNLELLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDISFQSLLDQSLPYAEISFDGKICVAKAEGSGGILNFRTCGQQLLYEVGDPAAYVTPDVVIDIRDVSFQSLSSHKVLCGRANPSPESVPGKLLRLVPK 335

HSP 2 Score: 201.83 bits (512), Expect = 9.176e-51
Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3

Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKA--CISAELALPPFQL-EDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDAS----PKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296
            + REHVFW+ G K ++V++ +  +VT+    +  ++   P  L E   N C     S EI LS+A SGQKIPLY + HSR+GDKGNDLNFS+IPH P +FE LK+IITP+WVK V+S L + S      AI+K  Q V E  V+VEIYEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLIL Q V+
Sbjct:  456 VGREHVFWQTGLKCSKVADSITQEVTREENLLKTDVVHEPLSLPEASLNICSVDCSSKEIGLSSAPSGQKIPLYTVCHSRSGDKGNDLNFSMIPHFPLDFERLKMIITPRWVKDVVSTLLNTSSFPDSDAINKRDQWVNE-HVKVEIYEVRGIHSLNVVVRNILDGGVNCSRRIDRHGKSISDLILSQQVV 645

HSP 3 Score: 184.111 bits (466), Expect = 5.347e-45
Identity = 83/108 (76.85%), Postives = 97/108 (89.81%), Query Frame = 3

Query:  189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512
            MEKQ  + IH+C+IK R++P++R+DKVYIGCGAGFGGDRPMAA KLL  VK+LNY+VLECLAERTLA+R+Q M+ GGDGYDS ISEWM LLLPLAV+RGTCIITNMGA
Sbjct:    1 MEKQDSDSIHNCVIKLRVDPKKRRDKVYIGCGAGFGGDRPMAALKLLQSVKQLNYLVLECLAERTLADRFQTMSVGGDGYDSRISEWMRLLLPLAVERGTCIITNMGA 108

HSP 4 Score: 171.014 bits (432), Expect = 7.942e-41
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 2

Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329
            GWKGWGE+SYGG+ECVKRA+AAE LVRSWMEE  PGV+  +LSYIIGLDSLK  SI    S+WR SEDIRLRMDGLF+ K HA Q  KEF ALYTNGPAGGGG+
Sbjct:  338 GWKGWGEVSYGGHECVKRARAAEFLVRSWMEEVVPGVNHNILSYIIGLDSLKTASISDDPSSWRTSEDIRLRMDGLFELKDHAVQFTKEFIALYTNGPAGGGGV 441

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9GPY9_POPTR	7.008e-88	80.45	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
V7AN02_PHAVU	2.597e-87	77.53	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
V4TXM5_9ROSI	4.882e-87	79.89	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A0B2PAL1_GLYSO	4.124e-86	78.77	Uncharacterized protein OS=Glycine soja GN=glysoja...	[more]
K7L083_SOYBN	4.245e-86	78.77	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A5BP01_VITVI	6.804e-86	76.09	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A072TQ15_MEDTR	9.016e-86	78.21	Propionyl-CoA carboxylase, putative OS=Medicago tr...	[more]
A0A072TN59_MEDTR	1.246e-85	78.21	Propionyl-CoA carboxylase, putative OS=Medicago tr...	[more]
V7AS45_PHAVU	2.135e-85	77.53	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
V4TDD4_9ROSI	4.270e-85	79.89	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010839	Acyclic terpene utilisation	PFAM	PF07287	DUF1446	coord: 59..226 e-value: 2.2E-58 score: 197.5
None	No IPR available	PANTHER	PTHR13943	HRAS-LIKE SUPPRESSOR - RELATED	coord: 53..236
None	No IPR available	PANTHER	PTHR13943:SF48	SUBFAMILY NOT NAMED	coord: 53..236
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..245
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094928 ID=g.barbadense_cottongen_reftransV1_0094928; Name=g.barbadense_cottongen_reftransV1_0094928; organism=Gossypium barbadense; type=contig; length=3578bp
CCTGCCTGATCTTATTGTATTTATTTAGTTATCATCATAATTATTAAGAA
CCCAGACTTCGTTTATCAGATTCTAATCAAGCAACTGATCGGTTTGATTA
CAGGGGAGAGCTATAATTTAGATTCCGGAGAAGAAAACTCGGCGGCGAGA
CAATTTCTCAACTCTTTTACATTGAATCTAAGATATCAATGGAAAAACAG
ACCTACGAAGAAATTCATGACTGCCTGATCAAGCCGAGAATCAATCCTCA
AAGAAGAAAAGACAAAGTTTATATTGGCTGTGGAGCTGGGTTCGGTGGTG
ACCGGCCAATGGCAGCTAAAAAATTGCTTAACAGAGTCAAAGAGCTGAAT
TATATTGTTCTTGAATGTTTAGCAGAACGTACTCTTGCAGAACGATACCA
GGCTATGGCGTCCGGCGGTGATGGCTATGATTCTAATATTTCAGAATGGA
TGTCTCTGCTACTACCTTTGGCTGTGGATAGGGGAACTTGTATAATTACC
AACATGGGTGCAAGTATGAGAATTTGAAAACATCGTTTCAAATTTTGAGT
TGTCTGCCAAATTTCACCAAATGCTTTGTGCTGATGTTCAAAGTTGTGTT
TGATCTTTTCTTTTCATACTGAGCATATTGATTCTTTCCTGGATAGTGGA
TCCGGTCAGTGCTCGAGAAAAGGTTTTAGAAGTTGCCAGCAGTCTTGGGA
TTCGTTTGTCTGTTGCTGTGGCTCATGAGGTCTTTGTTAATGAATCGGGT
ATGCTCATCAAGTTAGCCCCTTTTAAATTTAAGTTAATCATGTATGAGAA
TTTTGCTGGTGAGTTCAGATAACTGACAATTGTATGATCTTCATTTTAGA
AACTATAGTCAGTATATTGTTGTGTGCAATTCAGAATTTTCATTCATTGT
GTTTAGCAATATTCTTGGACTCCAAATGAGAAATATTTTTAAATATTCAG
GTTCAGGATCCTTGCCTGAGAAGCTGGTTAACATGGAAGGTGTAAGAATC
TGGTACTCCTTTGCATGTACCGTTCATTGGCCTTTTGTATCTTCTTTTTG
GTTTCACATAAAAGGATTAATGATCTGGTTTTCATCTGCATGTACGTTTT
TTCATCTTTAGTTATGAAATTTCATGAGAAATGCAAACTCTTGAGCTCTA
TCTTGTTTAATTCTTTGAAGGGTGTTAGCACATATCTGGGAGCAGCCCCA
ATAGTCGCATGTCTAGAGAGATACCAACCAAATGTTTTAATTACTTCAAG
GGTCGCTGATGCCGCACTATTCTTAGCACCAATGGTTTACGAATTGGGCT
GGAATTGGGATGACTTGGAGCTATTAGCACAGGGATCTCTGGCAGGACAC
CTTCTAGAGTGTGGTTGTCAACTCACAGGGGGATACTTCATGCATCCAGC
GGACAAGAACCGAAACTTGTCTTTCCCAAATCTCCTGGATCTATCACTGC
CATATGCTGAAATTTCATCAAGTGGGGAAATATGTGTCATGAAAGCAGAA
GGTAGTGGCGGGATTTTAAATTTCGGCACTTGTGCTGAACAACTACTTTA
TGAGGTTGGAGATCCAAGTGCTTACATTACACCTGATGTTGTAGTTGATT
TTCGGGGTGTTACATTTCAGCCATTATCTAGATCTAAAGTTCTCTGTATT
GGTGCAAAGCCATCTGCTCATCCTGTTCCTGATAAACTTTTGCAGTTGAT
TCCGAAGGTAACCTTCTATCCTGAAGGTAATATTTAGCTTTAAGGACTGT
TCTTTTTTCTTAGCTTCAGTCCTGCAGCAGATGGCTTGTAGGTATTTCAA
CAAAGCGTCTATTTCCATATTTCTGAATAAAGCATGTATTCTCTCTTCAC
TCTATGATTGAGGGAACCCCGTTGTTACCTCGTTGCAGCCCCTGTCCCCC
GCCTCCCCTCCCTCTAGTTATCTCAATTATTTTCTAGTCACAGATATTAC
TTCATTGGGTCTAATGTCTTCTAAGGTTGTCTCTATGCATTCTAATTTAT
CTTGTTTCCAGCACCGTGGATGGAAAGGATGGGGTGAGATATCATATGGA
GGATATGAATGTGTCAAACGTGCAAAAGCTGCTGAACTTCTTGTTAGGTC
ATGGATGGAAGAGGCATTTCCTGGTGTCAGTTCCTGTGTTCTTTCTTATA
TAATTGGACTGGATAGCTTGAAAGCTACCAGCATTGGTCACCATCTATCG
ACATGGAGAGCCAGTGAAGACATTCGGCTACGCATGGATGGACTATTCCA
GGAGAAGAAACACGCACAGCAACTTGCTAAAGAGTTTACTGCATTATATA
CAAATGGACCGGCCGGCGGTGGTGGTATCAGGTATATTTCCTCCTAATTT
TATATCTATGGTATGTACCATATATATGTACGAAAAACTAAATGCCAATA
GTGAATGTGTAAAGTTCTCTGGTTCTGGATAATGGCAATGGTTCATATGC
TGTATTCATGTACGCATGGATGGCGAGTTTCTTCTTTGGCTCCATGATCT
TTGTGCCTAACCTATGATGTTTATGTTTATCATCTCATGCAGCACTGGTG
TCAAGAAGGAAATTTTTCTGGAAAAACAGTTGGTACTCTCCGTTCCCTCT
TCTTCCTTTAAATAAATTCTTGGTCCTTGAAATCCTTAATGTTGAACTTG
AAACTGTAATCAGGCCAACATGTTGTTGTTCGAACTATTGAATTCATGTT
TATGAATGTGCTTATGCAAAGTAATCTGTTTCCTTTCTACTTAGATCAGT
CGAGAACATGTTTTCTGGCGGATAGGGGCAAAGCAAACAGAAGTCAGTGA
ACATGTCTTTGCAGATGTTACAAAGGCCTGCATTTCAGCTGAACTGGCAT
TGCCACCATTTCAACTAGAAGATATGCAGAACTCTTGCCTAGAATATGGT
TTGTCATCGGAAATCAGCCTCTCAGCAGCTCAGTCTGGTCAAAAGATTCC
ACTCTATAATATAGCCCACAGTAGGGCTGGAGATAAAGGAAACGACTTAA
ACTTCTCCGTCATCCCACACTGTCCGCAGAACTTTGAGATGCTGAAGCTT
ATCATAACACCCCAGTGGGTTAAGAGTGTGATCTCAGTCCTTCCGGATGC
ATCTCCAAAGGCCATTGATAAGACAAAACAATTGGTGAAGGAAGATAAAG
TACAGGTGGAAATCTATGAAGTCCATGGAATTCAGTCTTTAAATGTGGTG
GTTCGTAACATTCTCGATGGTGGTGTCAATTGCTCTCGAAGGATCGATCG
CCATGGAAAGTGCATCTCGGATCTTATCTTGTGTCAACATGTGTTACCTA
AGTTTTAATTACAATTCAACTTTAAAATTTTTTAATAATCGAAAATTTGT
CTGATATAATATAATATTACACTACATGTTCATATGTCAGCTTATGGGGA
TTGGGTATTATTTCCTTCTTATATTAAATGCGAATGAAGCTTATTTGAGA
GTAAGAATATAGGTATTAAAACAAAAATGACGAAAGTTGAAACACTGAAA
GATAATGCACTTCAGTGGATTCAAACCCACATCCTATTGTATTAGTAACA
ATATTTATTTCAATCGAGTTAAGACTTA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR010839	AtuA

Search form

g.barbadense_cottongen_reftransV1_0094928, g.barbadense_cottongen_reftransV1_0094928 (contig) Gossypium barbadense

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