g.barbadense_cottongen_reftransV1_0094858, g.barbadense_cottongen_reftransV1_0094858 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094858
Unique Nameg.barbadense_cottongen_reftransV1_0094858
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3382
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.656e-11
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 2146 EFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRI 2571
            E L    ++++L  LSL     + + P ++  L NL+ILD   C +L++L   I   KKL  LD++ C  L+  P+ +  L +L+VL GF    + N C L ++  L +LRKL +++       +E  D+L    KL  + I
Sbjct:  577 EILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISI 718          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 3.335e-8
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 2161 FKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDR-IGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLK 2409
            FKN++NL  LS+  +  + +LPT+L  L NL+ LD+R C+ LE LP+  +  L  LT L +  C +L  +P+ L  L+ L  LK
Sbjct:  877 FKNLENLIYLSVSFLENLKELPTSLASLNNLKCLDIRYCYALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSLK 960          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.149e-8
Identity = 65/236 (27.54%), Postives = 102/236 (43.22%), Query Frame = 1
Query: 2008 TLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLK--GF------------KNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLK----------------------GFVILEAKNSCTLDDLSELPSLRKLSV-NVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKE 2604
            T F +     DL T  FS              A+ G  R I V+D +     GF            K   +LR+L+L   S + +LP+++  L +LR LDL +C++   LP+R+  L+ L  LD+  CY L+ +P+Q +KLS L+ L                       GF I+ +K    L +L  L     +S+ ++   K + D   +  AK   L+ L ++W   G  R E
Sbjct:  470 TYFKIHDLIHDLATSLFSA------------SASCGNIREINVKDYKHTVSIGFAAVVSSYSPSLLKKFVSLRVLNL-SYSKLEQLPSSIGDLLHLRYLDL-SCNNFRSLPERLCKLQNLQTLDVHNCYSLNCLPKQTSKLSSLRHLVVDGCPLTSTPPRIGLLTCLKTLGFFIVGSKKGYQLGELKNLNLCGSISITHLERVKNDTDAEANLSAK-ANLQSLSMSWDNDGPNRYE 690          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: CSA1_ARATH (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.840e-7
Identity = 47/191 (24.61%), Postives = 90/191 (47.12%), Query Frame = 1
Query: 2104 ATAGQARHIEVEDIEFL--------KGFKNMKNLRLLSLQGI-------------------------SGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAW 2577
             TA +  H+++E+++FL           K++  ++L+SL+ +                         + I +LP  + +L+ L +L+++ C  L++LPD +G LK L  L LS C  L+  P+    +S L++L         +   + D+ ++ S+R+L +N N     I    D L KF +L+ L + +
Sbjct:  693 CTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISLKTLILSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEIL-------LLDETAIKDMPKILSVRRLCLNKNE---KISRLPDLLNKFSQLQWLHLKY 873          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RPP1_ARATH (Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.471e-7
Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 1
Query: 2143 IEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKL-----------SELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFN---IDEAGDALAKFQKLEKLRIAW 2577
            +E L   +N   LR L LQ  S + +LP ++    NL+ L++  C  L KLP  IG +  L   DLS C  L  +P  +  L           S+L+ L   + L++ ++  L D S+L S  ++S +++  +     I E   ++  +  L   +I++
Sbjct:  774 LEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISY 932          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: Q9FHI6_ARATH (RNI-like superfamily protein OS=Arabidopsis thaliana GN=At5g45500 PE=4 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.290e-92
Identity = 206/616 (33.44%), Postives = 306/616 (49.68%), Query Frame = 1
Query: 1444 LDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGN------GKDEM-----GDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFD-YDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFS-------KMT-------GIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGG----RLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQR-FPNLKYLENLRCPRITFCPCDANGVWQK 3189
            L D++K+CLL F++FPEN E+ +  L +WW+GE +++        G +E+       +   L  F ++ LIEPV  K +++P SYK+ P V + ++  +K+   FD YD   KP+M  S  +K C+V                   +G+S                                   +    +  + +D ++T+FN+S++FPD   +WFS       K+T        +KV YLGRWE TA   RHIEVE+ E +K  K M  L+LLS QGIS I +L   +CKL +L ILDLRAC++LEKLPD+I SLK L YLD+++CY++D +P++L+ L  L+VLKGFV+ +A +    CTL +L  L  LRKLS+++N   F+ID+   A+  F+KLEKL++AWG G     +   +D                      ++   + V   E  G  ER+A     E +    +L   L+                                KLDLQCFP    P WL P  +  +  L I+GG      G        K     LRLKFL   K+ W+++ +R FP LK+LE  +CP+++ CPCD  G+W+K
Sbjct:  259 LSDQRKICLLTFAVFPENQEVNRTMLMYWWMGEGILSTKDISSQEGTEEVILKPEDVVKVILKDFTDRNLIEPVEIKRKVEPSSYKMAPFVHASVVLISKEIGLFDMYDIKDKPVMKKSGMHKVCLV-------------------EGSSS---------------------------------QQEAKAKKMEDVDHIETVFNVSERFPDFTFKWFSEDKPTRNKLTLSKVTYQKLKVFYLGRWERTA--KRHIEVENPELMKNLKRMIKLKLLSFQGISRIERLDDAVCKLRDLIILDLRACYNLEKLPDKIDSLKALIYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDEETVCTLAELVHLKKLRKLSISINKENFSIDDVFVAVKSFKKLEKLKVAWG-GINTHPQGKGVD----------------------SEKGDENVKPKENIGILERAATMFRKEKDPTAPELPKTLK--------------------------------KLDLQCFPGEHLPEWLEPDNLLNVEKLYIKGGIKLTGFGKSLPSQNSKCKVTVLRLKFLPKLKVEWRDLSKRYFPELKFLEKYQCPQVSLCPCDGIGIWRK 765          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M5WDT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019132mg PE=4 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.159e-91
Identity = 247/729 (33.88%), Postives = 362/729 (49.66%), Query Frame = 1
Query: 1072 ELGKLCKELDYMIRSFQELENLKNS-------LREPFETLEANVNDIVSDLEKDELRKQVQHNLRVFRNNITRVKXXXXXXXXXXSINSDGNRALQTTFATGEAGD-LPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLI--AGNGKDEMGDLND-TLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQI----------DKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGT-ANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNH-EDGQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189
            ++ KL ++L Y+ ++F  L+N + S       L +P  +L   ++        D   KQ Q  LRV    I ++K+LI  Q Q     ++        F   +  D L  L+   +F  S  FK+F   Y  L    KLCLLCF++FP N  IKK  L  WW+GE  +    +GK+ + ++ D       +K  IEP+ KK R          +VRS  +H               P++       A +V ++      F D+    D  GN                               F++ H   L+  S  +          +KLQT+F++++ +PD     +S++  +KVLYLGRW + A    HIEV+D+EF KG + M++L   SL+GIS I +LP +LCKL +LRILDL ACH+LE  P+ IG LK LT+LD+SECYLL+++P+ +  LSELQVL GF+I      C L DLS L  LRKL++N +   F  +E      +F  L KL IAWG   +P  +   LD          K+ +  +I++    ++T K + G +  +       AA E  + T     G+R     I      ++R++  G   +N E  + L KLDLQC+P+   P+WL+P K+K L  L  RGG+L  L    +  KW    LRLKFL   K++W E+Q  FP+L YLE  RCP++TF PCDA+G W K
Sbjct:    4 QIEKLRRDLVYIRQAFTGLKNFEESASALFKILLQPLHSLHQLLDQPTQFHIHDSREKQFQSKLRVHSEIIIKLKLLIPSQHQMVLNKANPLSLTGVVFDPNKVLDQLSDLHFSKVFGESPTFKDFRVVYNSLCVTTKLCLLCFAVFPANEVIKKGLLVHWWIGEGFLNPPVDGKETVVEIADGVFEELTKKGCIEPLYKKRR---------SVVRSFKMH---------------PLI-----RSAVIVIAKDVR---FFDF----DSKGNPTAN---------------------------FSWSHWACLMNGSSHLTLANRPDLDPEKLQTIFSVNEAYPDFSEVDWSRLRNVKVLYLGRWHSRANH--HIEVDDVEFFKGLRYMRHLIFFSLRGISRIMELPDSLCKLSSLRILDLSACHNLEIFPETIGLLKMLTHLDMSECYLLEHMPKGIALLSELQVLNGFII------CALHDLSALKKLRKLTINTSREDFPREEELIVFHQFGSLRKLTIAWGGLYLPAIQ---LD----------KRIKLKNIAAQRTTSNTLKSSGGNQTQD------NAAPEPATPT-----GIRNHFRKIPSSLPAFKRIT--GTTTRNQEHFKELEKLDLQCYPQMTAPSWLMPGKLKSLKKLYSRGGQLQNLGQVHENDKWTIRILRLKFLSELKLDWNELQVSFPDLIYLEKYRCPKLTFFPCDASGPWLK 635          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M4DZN4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra021981 PE=4 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 3.514e-86
Identity = 200/603 (33.17%), Postives = 295/603 (48.92%), Query Frame = 1
Query: 1456 QKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFD-YDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSK----------------MTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNT-TKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGR----LGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQ-RFPNLKYLENLRCPRITFCPCDANGVWQ 3186
            +K+C+L F++FPEN E+ +  L +WW+GE ++    K E   + D L  F+EK+LIEPV  K +++P  YK+TP V S ++  +++   F  Y    KP M  S   K C+V+   +     A  +   D                                                     ++T+FN+S++FPD   +WFS+                   +KV YLGRWE TA   RHIEVE+ E +K  K+M  L+LLS QGIS I +L   +CKL  L ILDLRAC++LEKLPD+I SLK LTYLD+++CY++D +P++L+ L  L+VLKGFV+ +A +    C L +L  L  LRKLS+ +N   +F + +    +  F  LEKL++AWG                                             G  + N   S   A  E      +L        N  +   K  +   K   P +L   E+L+KLDLQCFP +E PT L P K++ L  L I+GG      G    E+  + +   LRLKFL   K+ W+E+++  FP L++L+  +CP+++FCPCD  G+W+
Sbjct:  232 RKICMLSFAVFPENQEVNRTMLMYWWIGEGILPDGIKPEDA-VKDILKEFMEKKLIEPVENKRKVEPNCYKMTPFVHSSVVLISEEIGLFSMYQKGKKPRMKHSDLKKVCLVEESSSQPEAKAKKMPAGD-----------------------------------------------------IETVFNVSERFPDFAFKWFSEDQSSGKKKFSSLSKTAYKMLKVFYLGRWERTAN--RHIEVENPELMKYLKHMTKLKLLSFQGISRIERLDDAVCKLRELIILDLRACYNLEKLPDKIDSLKALTYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDVETFCLLSELKHLKKLRKLSITINKGGEFTVSQLFVDIQDFSNLEKLKVAWG---------------------------------------------GINEHNKAESTSGAVKEFIRSMTRL------PPNSPVTGPKPHKAPKKAAVPSHLP--EKLMKLDLQCFPDAELPTLLEPGKLRTLEKLYIKGGTKLTGFGKSVPEEPTECSVKVLRLKFLPRLKVEWRELRELYFPKLEFLDKYQCPQVSFCPCDGIGIWR 725          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A067ECX4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045877mg PE=4 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 2.873e-82
Identity = 179/443 (40.41%), Postives = 265/443 (59.82%), Query Frame = 1
Query: 1357 EAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENL----IAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFS---SCNKACMV----------KSERATASWFADYL---KGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPH-----ENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA-------KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGG 2589
            ++ DLP++  +  F+   +F EF++ ++ L + Q  CLLCF++FPEN+ IKKR L  WW+GE      I G    E    +  L  F EK  I PV KK+R    S++++P+VRS +I  AK+  FF +D +G P M+F    +  +AC+V          + E++     A  L   K   +D        +            + + +  K++ LFNF       EN     + +  +++TLFN+S++FP+   +WFSK+  IKVLYLGRW++T     HIE+E  ++LKG KNMK LRLLSLQG+SGI +LP+ +  L +L ILDLRAC++L+KLPD IG LK LT+LD+SEC+LLD IP++L+ LS+LQVLKGFVI +        K  C+L DL +L  LRKL++N+N+ KF  +     LA F++L +L+++WG G 
Sbjct:  211 QSKDLPNMADKTRFKEHDFFIEFKKIFQSLGNDQS-CLLCFAVFPENAVIKKRLLVNWWIGEGFLKERIQGENSAEKA-ADKLLREFEEKGFILPVDKKHRGVANSFRMSPLVRSAVITLAKENNFFHFDSEGIPTMNFQKYETFKRACLVYDHKEGSVPLRLEQSAIKLAAMELLEEKRLGEDNQKAVQFAESMALFNFGEKPEQKAVEFEKIKKLFNFSLSLEEIENKAKDCAMKRGRIETLFNVSEEFPEFKYDWFSKLEKIKVLYLGRWQSTVDDIPHIEIESTDYLKGLKNMKELRLLSLQGMSGIQELPSEISYLTSLEILDLRACYNLDKLPDEIGKLKSLTHLDISECFLLDGIPKKLSLLSKLQVLKGFVISDHAEDDRRWKRWCSLKDLEKLEHLRKLTININSEKFQTENLSTVLA-FKRLLQLKVSWGGGS 650          

HSP 2 Score: 108.612 bits (270), Expect = 1.004e-20
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 2893 RLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKW-NADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189
            +L KLD QCFP  + P+W+ P   K L NL IRGGRL  L   +G +W     LRLK+L   K++WK +Q+ FP L+YLE  +C ++T CPCD  G+W+K
Sbjct:  689 KLEKLDFQCFPDEKLPSWVHPYSFKNLKNLYIRGGRLNSL---EGSEWETVKVLRLKYLNELKIDWKGLQELFPKLEYLEKFKCHKVTLCPCDGYGIWEK 785          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: V4SSC9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030735mg PE=4 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 2.932e-82
Identity = 178/445 (40.00%), Postives = 262/445 (58.88%), Query Frame = 1
Query: 1357 EAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENL----IAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFS---SCNKACMVKSER---------------ATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNF-----PHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA-------KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGG 2589
            ++ DLP++  +  F+   +F EF++ ++ L + Q  CLLCF++FPEN+ IKKR L  WW+GE      I G    E    +  L  F EK  I PV KK+R    S++++P+VRS +I  AK+  FF +D +G P M+F    +  +AC+V   +               A      +   G DK         +            + + +  K++ LFNF       EN     + +  +++TLFN+S++FP+   +WFSK+  IKVLYLGRW++T     HIE+E  ++LKG KNMK LRLLSLQG+SGI +LP+ +  L +L ILDLRAC++L+KLPD IG LK LT+LD+SEC+LLD IP++L+ LS+LQVLKGFVI +        K  C+L DL +L  LRKL++N+N+ KF  +     LA F++L +L+++WG G 
Sbjct:  210 QSKDLPNMADKTRFKEHDFFIEFKKIFQSLGNDQS-CLLCFAVFPENAVIKKRLLVNWWIGEGFLKERIQGENSAEKA-ADKLLREFEEKGFILPVDKKHRGVANSFRMSPLVRSAVITLAKENNFFHFDSEGIPTMNFQKYETFKRACLVYDHKEGSVPLRLEQSAIKLAAMELLEEKRLGEDK--QKAVQFAESMALFNFGEKPEQKAVEFEKIKKLFNFNLSLEEIENKAKDCAMKRGRIETLFNVSEEFPEFKYDWFSKLEKIKVLYLGRWQSTVDDIPHIEIESTDYLKGLKNMKELRLLSLQGMSGIQELPSEISYLTSLEILDLRACYNLDKLPDEIGKLKSLTHLDISECFLLDGIPKKLSLLSKLQVLKGFVISDHAEDDRRWKRWCSLKDLEKLEHLRKLTININSEKFQTENLSTVLA-FKRLLQLKVSWGGGS 649          

HSP 2 Score: 111.694 bits (278), Expect = 1.176e-21
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 2893 RLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKW-NADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189
            +L KLD QCFP  + P+W+ P   K L NL IRGGRL  L   +G +W     LRLK+L   K++WKE+Q+ FP L+YLE  +C ++T CPCD  G+W+K
Sbjct:  688 KLEKLDFQCFPDEKLPSWVHPYSFKNLKNLYIRGGRLNSL---EGSEWETVKVLRLKYLNELKIHWKELQELFPKLEYLEKFKCHKVTLCPCDGYGIWEK 784          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A0D3AUC4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.448e-82
Identity = 202/607 (33.28%), Postives = 299/607 (49.26%), Query Frame = 1
Query: 1444 LDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGK-PIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSK----------------MTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTT-KFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGR----LGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQ-RFPNLKYLENLRCPRITFCPCDANGVWQ 3186
            L   +K+CLL F++FPEN E+ +  L +WW+GE ++    K E   +   L  F+EK+LIEPV  K +++P  YK+TP V S ++  +++   F     GK P M  S   K C+V+   +     A  +   D                                                     ++T+FN+S++FPD   +WFS+                   +KV YLGRWE TA   RHIEVE+ E +K  K+M  L+LLS QGIS I +L   +CKL  L ILDLRAC++LEKLPD+I SLK LTYLD+++CY+LD +P++L+ L  L+VLKGFV+ +A +    C LD+L  L  LRKLS+ +N    F + +    +  F  LEKL++AW  GG+                                + + DK   G  K  +             +T  L G      N  +   +  ++  K   P +L   ++LVKLDLQCFP +E P+ L P K++ L  L I+GG      G    E   + +   LRLKFL   K+ W+E+++  FP L++L+  + P+++FCPCD  G+W+
Sbjct:  231 LTTERKICLLSFAVFPENQEVNRTMLMYWWIGEGILPDGIKPEDA-VKGILKEFMEKKLIEPVENKRKVEPNCYKMTPFVHSSVVLISEEIGLFSMYQKGKTPRMKHSDLKKVCLVEESSSQPEAKAKKMPAGD-----------------------------------------------------IETVFNVSERFPDFAFKWFSEDQSSGKKKFSPLSKTAYKMLKVFYLGRWERTAN--RHIEVENPELMKYLKHMTKLKLLSFQGISRIERLDDAVCKLRELIILDLRACYNLEKLPDKIDSLKALTYLDITDCYMLDRMPKRLSWLDNLEVLKGFVVSDATDVETFCLLDELKHLKKLRKLSITINKGGDFTVFQLFVDIQDFSNLEKLKVAW--GGI-------------------------------NEHNKDKPTAGPVKKFF-------------RTVTLLG------NSPVTEPELHKVPKKDPVPSHLP--KKLVKLDLQCFPEAELPSLLEPGKLRTLEKLYIKGGTKLTGFGKSVPEKPTECSVKVLRLKFLPRLKVEWRELRELYFPKLEFLDKYQSPQVSFCPCDGIGIWR 727          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A067JMW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21335 PE=4 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.758e-80
Identity = 200/543 (36.83%), Postives = 298/543 (54.88%), Query Frame = 1
Query: 1072 ELGKLCKELDYMIRSFQELENLKNSLREPFETLEAN---VNDIVSDLEKDE------LRKQVQHNLRVFRNNITRVKXXXXXXXXXXSINSDGNRALQTTF---ATGEAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIA---GNGKD-------EMGDLNDTLT---------TFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQA-------RHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVI--LEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWG 2580
            +L +L K+L+++  +F++L++L+ ++ E F TL+     +N +V+ +++ +        KQ   N++   + + ++K+ I    +  S+ ++ +R ++T     A     ++  L     F++   FK+FEE Y  LD   +LCLLCF++FPE + +KKR L +WWVGE  I    G  KD          DL   L           F+EK  +EPV++K RL    +++   +R  +I  A+KA FF++D  G P  DFSSC +AC+VK+E   +      +K N                                   L   PH  +  +   Q +KL+TLFN++  +PD   +WF +M  + VL LGRW+ ++ +        RHIEVE IEFLKG KNMK L+ LSLQG+S +  LP T+  L NLRILDL ACH+LE LPD+I SLK LT+LD+SECYLLD +P+ L  L+ LQVLKGFVI  L+ K+S +L DL+ L  LRKLS+  +  +F   +  DAL +   L KL I WG
Sbjct:  196 QLERLEKDLNFIQIAFEKLKDLELNVSEQFITLQKQGQILNRVVNYIQQPQNGTSAFPTKQFHANIKAITDMVMKLKLQIPSPHKM-SLATEAHRTIETVSGLDARNLIDEMLELPSNKKFQDCSAFKDFEESYNSLDTSYRLCLLCFAVFPEGAVVKKRLLMYWWVGEGFIDTQDGGKKDGENEPPNSQNDLKKALAEEVAYKILKKFLEKGFVEPVIRKRRLI--GFRMHAWIRYAVISRAEKAGFFNFDRMGNPTADFSSCQRACLVKTEEVYSRSL--LIKNN---------------------------------HNLQKNPHSESE-QEKLQPEKLRTLFNVNDPYPDFELQWFLRMKNVNVLCLGRWDNSSKKHTEDEEGKRHIEVEGIEFLKGLKNMKYLKYLSLQGVSRVNVLPDTVWNLPNLRILDLNACHNLEALPDKIVSLKNLTHLDISECYLLDCVPKGLESLTNLQVLKGFVISDLKIKHSGSLGDLAGLTKLRKLSIYTSKKEFPTGQELDALRRITGLRKLTIEWG 699          

HSP 2 Score: 117.087 bits (292), Expect = 2.357e-23
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 2791 GGGLRGTANIALMAKKWRRLSM------KGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDG--QKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVW 3183
            G  L  +     +AKK++R +        G  PQ  EGLE   KLDLQC+P ++ P+WL P K++ L  L +RGG L  +    G   KWN   L +KFL   KM+W+E+   FPNL YLE ++CP++TF PCD +GVW
Sbjct:  700 GKSLDKSGTNPTVAKKYKRSTAFKQDNDTGINPQLPEGLE---KLDLQCYPGTKAPSWLRPGKLEHLKKLYVRGGNLSDMGQARGGNDKWNVRILHVKFLSELKMDWRELCDAFPNLIYLEKVKCPKLTFFPCDESGVW 835          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M5WJ22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016037mg PE=4 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.285e-76
Identity = 165/386 (42.75%), Postives = 221/386 (57.25%), Query Frame = 1
Query: 1441 GLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLI---AGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAK---NSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWG 2580
            GLD   KLC LCFS+FPEN+ IKK+ L  WWVGE  I     +GK      N     F+EK LI+PV KK R    S  + P VR   I  AK+A FF +D +G P  DF+   +AC+VK+E                +G+S                             +   P+     R  Q+  K+Q++ N+++   D   EWFSKM  + VL LGRWE++A     I+VED EFLKG KNM++LR LSL+G+S I +LP ++CKL NLRIL+L  C DLE+LP  IGSLK LT+LD+ ECYL+ ++P+ L  LS+L+VLKGFVI E +   N C L DLS L +LRKLS++V+ T         +LA+F+KL+ L I+W 
Sbjct:  159 GLDVTLKLCFLCFSVFPENAVIKKKVLVHWWVGEGFIDTLGTSGKTAEDTANQFFNDFIEKGLIKPVYKKRRPSADSCSMEPSVRYAAIKLAKRAGFFSFDSNGNPTEDFTCSRRACLVKTE----------------EGSS-----------------------------VHELPY-----RLEQE--KVQSIINVNELNLDFRPEWFSKMKYVAVLQLGRWESSAKHL--IQVEDSEFLKGLKNMRHLRYLSLRGVSRITELPASICKLSNLRILNLNGCVDLEQLPQGIGSLKNLTHLDMYECYLISHMPKGLALLSQLRVLKGFVIGEPRPGGNYCKLADLSGLENLRKLSIHVDKTSDAAKRELFSLAEFKKLQSLSISWS 490          

HSP 2 Score: 100.523 bits (249), Expect = 2.303e-18
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 2896 LVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189
            L KL+L  FP S+ P WL+   +  L  L IRGG L  L H     W  + +RLKFL   +M+W+++Q+ FP+L YLE  +CP+++F PCD NGVW+K
Sbjct:  536 LKKLNLHYFPGSKMPDWLMQWDLTTLKKLYIRGGSLSNLCHGKEDNWAVEVVRLKFLEKLQMDWRKLQELFPSLTYLEIDKCPKLSFIPCDENGVWKK 633          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: D7MU09_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_356455 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.961e-75
Identity = 162/404 (40.10%), Postives = 228/404 (56.44%), Query Frame = 1
Query: 2002 LQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA--KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGL----ERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHED---GQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQ 3186
            LQT+FN S++FPD   +WF  M  I+VLYLGRWE  A   RHIEVE  EFLK  K++KNLRL S QGISGI K+  ++C L+ L ILDLRAC+DL+ LP+ IGSL+ L YLD+SEC  LD +P +  KLS LQVLKGFVI ++  +++C    +  L +LRKLS+ +   +F  +   ++L   ++LE L  AW     P  +                                    +GEE                +K AKL   L G  N     KKW    ++ ++ Q+++      + L KL+L+CFP +EPP+WL P+ +K+L  LSI+GG+L  ++ E      KW  + LRLK+L  FK+ W++++  FP +  LE  +CP+I FCP D NGVW+
Sbjct:  422 LQTVFNSSERFPDFTFKWFPLMDSIRVLYLGRWERMA--ERHIEVESTEFLKNMKSLKNLRLASFQGISGIKKIDNSICALQKLMILDLRACYDLQVLPNDIGSLENLIYLDVSECLKLDCMPDRFEKLSGLQVLKGFVISQSDDEHNCA---VKHLVNLRKLSITIKNYRFKAENLIESLRDLKQLESLTFAWR-ARFPVDD-----------------------------------RRGEE----------------TKEAKL---LMGMGN---QTKKW---GIRWQKDQSIDDTYKFPDSLKKLELECFPETEPPSWLNPKDLKELKRLSIKGGKLSRMSDESRNTEDKWAVEILRLKYLHEFKVEWRDLKDLFPKMTLLEKYKCPKIAFCPTDGNGVWR 759          
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: Q8LPR3_ARATH (AT5g45500/MFC19_17 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.100e-73
Identity = 159/423 (37.59%), Postives = 226/423 (53.43%), Query Frame = 1
Query: 1987 QQIDKLQTLFNLSKQFPDLPTEWFS-------KMT-------GIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGG----RLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQR-FPNLKYLENLRCPRITFCPCDANGVWQK 3189
            + +D ++T+FN+S++FPD   +WFS       K+T        +KV YLGRWE TA   RHIEVE+ E +K  K M  L+LLS QGIS I +L   +CKL +L ILDLRAC++LEKLPD+I SLK L YLD+++CY++D +P++L+ L  L+VLKGFV+ +A +    CTL +L  L  LRKLS+++N   F+ID+   A+  F+KLEKL++AWG G     +   +D                      ++   + V   E  G  ER+A     E +    +L   L+                                KLDLQCFP    P WL P  +  +  L I+GG      G        K     LRLKFL   K+ W+++ +R FP LK+LE  +CP+++ CPCD  G+W+K
Sbjct:    2 EDVDHIETVFNVSERFPDFTFKWFSEDKPTRNKLTLSKVTYQKLKVFYLGRWERTA--KRHIEVENPELMKNLKRMIKLKLLSFQGISRIERLDDAVCKLRDLIILDLRACYNLEKLPDKIDSLKALIYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDEETVCTLAELVHLKKLRKLSISINKENFSIDDVFVAVKSFKKLEKLKVAWG-GINTHPQGKGVD----------------------SEKGDENVKPKENIGILERAATMFRKEKDPTAPELPKTLK--------------------------------KLDLQCFPGEHLPEWLEPDNLLNVEKLYIKGGIKLTGFGKSLPSQNSKCKVTVLRLKFLPKLKVEWRDLSKRYFPELKFLEKYQCPQVSLCPCDGIGIWRK 367          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
R13L4_ARATH3.656e-1131.69Disease resistance RPP13-like protein 4 OS=Arabido... [more]
RGA3_SOLBU3.335e-840.48Putative disease resistance protein RGA3 OS=Solanu... [more]
RGA4_SOLBU7.149e-827.54Putative disease resistance protein RGA4 OS=Solanu... [more]
CSA1_ARATH1.840e-724.61Disease resistance-like protein CSA1 OS=Arabidopsi... [more]
RPP1_ARATH3.471e-727.04Probable disease resistance protein RPP1 OS=Arabid... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q9FHI6_ARATH7.290e-9233.44RNI-like superfamily protein OS=Arabidopsis thalia... [more]
M5WDT0_PRUPE2.159e-9133.88Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
M4DZN4_BRARP3.514e-8633.17Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
A0A067ECX4_CITSI2.873e-8240.41Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4SSC9_9ROSI2.932e-8240.00Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A0D3AUC4_BRAOL4.448e-8233.28Uncharacterized protein OS=Brassica oleracea var. ... [more]
A0A067JMW9_JATCU2.758e-8036.83Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5WJ22_PRUPE1.285e-7642.75Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7MU09_ARALL4.961e-7540.10Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8LPR3_ARATH2.100e-7337.59AT5g45500/MFC19_17 OS=Arabidopsis thaliana PE=2 SV... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 680..776
e-value: 1.1E-19
score: 69.7
coord: 397..581
e-value: 1.1E-19
score: 69.7
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 389..592
coord: 683..777
NoneNo IPR availablePANTHERPTHR23155:SF638SUBFAMILY NOT NAMEDcoord: 353..359
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 685..732
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 758..789
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 209..326
NoneNo IPR availablePANTHERPTHR23155:SF638SUBFAMILY NOT NAMEDcoord: 685..732
coord: 209..326
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 389..601
coord: 353..359
NoneNo IPR availablePANTHERPTHR23155:SF638SUBFAMILY NOT NAMEDcoord: 389..601
coord: 758..789

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094858 ID=g.barbadense_cottongen_reftransV1_0094858; Name=g.barbadense_cottongen_reftransV1_0094858; organism=Gossypium barbadense; type=contig; length=3382bp
GTCACTCGCATCTTTTTAGTCCTATTACTTGGCCTCTCCAACTCTTTTTC
TTTCCAGTGTTAAATCACTTTTTCTCTATCGTCGAAAGTCTGGTCGATTC
TGGCGTTTCACTGTTGTTCCTTTTAGACTAACGAGAATTAAAAAAAAATA
AAGCTGCAAAATTATTAGGGGAAAAATGGGCTTTTCTCTTCTGATCAGAT
CAAATCAGTCTCAACCGTCTGATTAATCAGTCAAAAAAAAAAAAACCTTG
TCTTCCTTTATAATCCGCTCTCGGCTTTTCCCTCATTTTCTTCACTGATT
GGTTTCATTGCGGATTTTTTCTTTTCATTTTTTAGCGGCGGACTTTGAAT
TTTTTCGGTAGGTAAGTTTTTTTTTTTTTTGTAGAAGGATGGACATGATT
TTTCTTTTAGCCTCGCTTTAAATTGATTCGCATTGTTAAAAGATCTATGA
TTCGATTGTAATGACGTAAATTAAATTTGTATTTTTTCAAGTATAATTTC
GATTTTTTGGTGACATTTTAGTATATTTTTCGTTCCCTTTTTTTGATTTC
TAATTTCATGCTGTGAATGAATATGCAGGGTTTAAAAATGGTTTTGCTGA
GAGAACATAGTAAAGCCTTGGCGCTTTAGTCTAGCAACTGCCTCTTTTTT
TTTTTTGTTTCTTTTTTCTTTTTTCCTTCTTGGAATATTCAAGGGAACCT
TCCCAGCTTCTCCTGCAGACTAGTTACTAATTAGGTTGAGAGATTTTTTT
TTACCTGGTGTGTGTTTATATTCTTGTCCAGGCTCACTTTCTTGAGCTAA
TGCCCTAGCCATGTCTTCCACAGATGACAAGCCACCTCCCTTATCCATTC
AGGACATAAACAATATCATAACGAACCTGAAGAACCTCCTCACTAGCGAT
TGTGCAGAGGCCGAAATCACTGTCGCCACCAACACTGCGGCTAATAACCT
GACTGGAAATGAGCAAGATGGCTCTAACCGTACTGGAAATGAGCAAGATG
GGACCAACAAACAGGATGGAGATGCTAACCAGGCCCAGGAGACCAACGAC
AAGAAGAAGGAACCGCTGTACGAGCTGGGAAAACTATGCAAAGAACTCGA
TTATATGATCAGGTCATTCCAGGAACTGGAGAACTTAAAAAATAGTCTAA
GAGAACCATTCGAAACTCTTGAGGCCAATGTCAACGACATCGTGAGTGAT
CTCGAAAAAGACGAGTTACGAAAACAGGTTCAGCACAATCTACGTGTGTT
CAGAAACAACATCACCCGAGTCAAAATCCTGATCCTCTTGCAACTTCAGG
CCGCCAGTATAAATTCCGATGGTAATCGTGCTTTGCAGACAACCTTTGCC
ACCGGCGAGGCAGGGGACTTGCCTCACCTATATGGTGAACATATATTTGA
AAATAGCTATTATTTTAAAGAATTTGAGGAAAAATATGAAGGCCTTGATG
ACAGGCAGAAACTGTGCTTGCTGTGTTTCTCAATTTTCCCTGAAAATTCG
GAGATAAAGAAGAGGTTTTTGAGATTTTGGTGGGTCGGAGAAAACTTAAT
CGCCGGAAATGGAAAGGATGAGATGGGAGATTTAAACGACACTCTCACCA
CATTCGTGGAGAAGAGGCTAATCGAGCCTGTTCTGAAGAAAAACAGATTA
CAACCCAGAAGCTACAAGGTGACCCCAATTGTTCGTTCGTGCTTGATCCA
TTTTGCCAAGAAAGCGAGGTTCTTCGATTATGACCCGGATGGAAAGCCCA
TCATGGATTTTTCATCTTGCAACAAGGCATGTATGGTGAAGTCAGAAAGA
GCTACTGCTTCCTGGTTCGCTGATTATCTTAAAGGCAATGACAAGGATGG
CAATTCAGAAAAGCCTAAAGAGCAGCAGCAACATCAGGAGCAAGGAAAGC
TATTGCAAGGAAAGCTATCTGCAGATCTAGTAAAGCTGCAGATGTTGTTC
AATTTTCCACATGAGAACACATTGATAAGAGCTAGTCAGCAAATTGATAA
ATTGCAGACGTTGTTCAACTTGAGTAAGCAATTTCCAGATTTACCTACGG
AGTGGTTTTCTAAGATGACGGGCATTAAAGTTCTTTATTTGGGTAGATGG
GAAGCCACGGCTGGGCAAGCTCGCCATATTGAGGTGGAAGACATTGAGTT
CTTAAAAGGGTTCAAAAACATGAAGAATTTAAGGCTTCTTAGCCTTCAAG
GTATTTCCGGTATCCCAAAGCTTCCCACCACTCTGTGCAAGCTTGAAAAT
TTGAGGATATTAGATCTAAGAGCATGTCACGATCTGGAGAAGCTACCAGA
CAGGATAGGGTCACTTAAGAAGCTGACTTACTTGGATTTATCAGAATGCT
ATCTGCTTGATTACATTCCCCAACAGCTGAATAAACTATCGGAACTTCAA
GTCCTTAAAGGGTTTGTGATTCTGGAAGCCAAAAACTCATGCACACTAGA
CGATTTGTCGGAGTTACCGAGTCTGAGAAAACTAAGCGTCAATGTGAACA
CTACCAAGTTCAATATCGATGAGGCAGGGGACGCTCTCGCTAAATTTCAG
AAACTTGAGAAGTTGAGGATAGCGTGGGGATGGGGGGGAATGCCAAGAAA
AGAGGATTCTACGCTAGACAGTAGTAGCGAACAACAGCAATCCAAGACCA
AGAAGAAGCAGGCAAGTAGTATTAGTAGTGCAGCAGCAAAAGCCTCGACT
GATAAAGTGAACAAGGGAGAGGAGAAAGGCAACTGGGAAAGGAGTGCAGT
CGCAGCAGCTGGTGAAGCAAATTCAAAGACCGCGAAGCTGGGAGGTGGTT
TAAGAGGGACAGCCAACATAGCTTTGATGGCTAAGAAATGGAGGAGGTTG
TCAATGAAAGGGAGAGAACCACAAAATCTGGAAGGCCTTGAGAGACTGGT
GAAACTGGACCTCCAGTGTTTCCCTCGCTCGGAACCACCTACTTGGCTGG
TACCAAGAAAAATGAAGAAACTCACGAATTTGTCGATTAGAGGTGGAAGA
CTGGGTTACCTAAATCATGAGGATGGCCAGAAGTGGAATGCGGACACCTT
ACGTTTGAAGTTTTTGGTGAACTTCAAGATGAACTGGAAAGAAATGCAGC
AACGATTTCCCAATTTGAAATATTTGGAGAACCTTAGATGCCCAAGAATC
ACATTCTGCCCATGCGATGCCAATGGAGTATGGCAAAAGTTCGTCCAATC
CAAATAAACTTCAACCTTTGAGCATTTGAATTTACTTTGCATTCTTGTTT
CTTTGTTTCTAATTCACCGGACAAGTTTGTGTTGTATTTCAGTTTCACCT
TCTTTTTTTCCTAGTTTGTTGTATTTTCCTTTATGGAAGAAATGGTAATT
TTCTTTATCCAACAAAGTCTTGTTTTTTCTGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf