g.barbadense_cottongen_reftransV1_0094858, g.barbadense_cottongen_reftransV1_0094858 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.656e-11 Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 2146 EFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRI 2571 E L ++++L LSL + + P ++ L NL+ILD C +L++L I KKL LD++ C L+ P+ + L +L+VL GF + N C L ++ L +LRKL +++ +E D+L KL + I Sbjct: 577 EILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISI 718
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 3.335e-8 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 2161 FKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDR-IGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLK 2409 FKN++NL LS+ + + +LPT+L L NL+ LD+R C+ LE LP+ + L LT L + C +L +P+ L L+ L LK Sbjct: 877 FKNLENLIYLSVSFLENLKELPTSLASLNNLKCLDIRYCYALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSLK 960
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 7.149e-8 Identity = 65/236 (27.54%), Postives = 102/236 (43.22%), Query Frame = 1 Query: 2008 TLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLK--GF------------KNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLK----------------------GFVILEAKNSCTLDDLSELPSLRKLSV-NVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKE 2604 T F + DL T FS A+ G R I V+D + GF K +LR+L+L S + +LP+++ L +LR LDL +C++ LP+R+ L+ L LD+ CY L+ +P+Q +KLS L+ L GF I+ +K L +L L +S+ ++ K + D + AK L+ L ++W G R E Sbjct: 470 TYFKIHDLIHDLATSLFSA------------SASCGNIREINVKDYKHTVSIGFAAVVSSYSPSLLKKFVSLRVLNL-SYSKLEQLPSSIGDLLHLRYLDL-SCNNFRSLPERLCKLQNLQTLDVHNCYSLNCLPKQTSKLSSLRHLVVDGCPLTSTPPRIGLLTCLKTLGFFIVGSKKGYQLGELKNLNLCGSISITHLERVKNDTDAEANLSAK-ANLQSLSMSWDNDGPNRYE 690
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: CSA1_ARATH (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.840e-7 Identity = 47/191 (24.61%), Postives = 90/191 (47.12%), Query Frame = 1 Query: 2104 ATAGQARHIEVEDIEFL--------KGFKNMKNLRLLSLQGI-------------------------SGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAW 2577 TA + H+++E+++FL K++ ++L+SL+ + + I +LP + +L+ L +L+++ C L++LPD +G LK L L LS C L+ P+ +S L++L + + D+ ++ S+R+L +N N I D L KF +L+ L + + Sbjct: 693 CTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISLKTLILSGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEIL-------LLDETAIKDMPKILSVRRLCLNKNE---KISRLPDLLNKFSQLQWLHLKY 873
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Match: RPP1_ARATH (Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.471e-7 Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 1 Query: 2143 IEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKL-----------SELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFN---IDEAGDALAKFQKLEKLRIAW 2577 +E L +N LR L LQ S + +LP ++ NL+ L++ C L KLP IG + L DLS C L +P + L S+L+ L + L++ ++ L D S+L S ++S +++ + I E ++ + L +I++ Sbjct: 774 LEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISY 932
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: Q9FHI6_ARATH (RNI-like superfamily protein OS=Arabidopsis thaliana GN=At5g45500 PE=4 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 7.290e-92 Identity = 206/616 (33.44%), Postives = 306/616 (49.68%), Query Frame = 1 Query: 1444 LDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGN------GKDEM-----GDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFD-YDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFS-------KMT-------GIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGG----RLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQR-FPNLKYLENLRCPRITFCPCDANGVWQK 3189 L D++K+CLL F++FPEN E+ + L +WW+GE +++ G +E+ + L F ++ LIEPV K +++P SYK+ P V + ++ +K+ FD YD KP+M S +K C+V +G+S + + + +D ++T+FN+S++FPD +WFS K+T +KV YLGRWE TA RHIEVE+ E +K K M L+LLS QGIS I +L +CKL +L ILDLRAC++LEKLPD+I SLK L YLD+++CY++D +P++L+ L L+VLKGFV+ +A + CTL +L L LRKLS+++N F+ID+ A+ F+KLEKL++AWG G + +D ++ + V E G ER+A E + +L L+ KLDLQCFP P WL P + + L I+GG G K LRLKFL K+ W+++ +R FP LK+LE +CP+++ CPCD G+W+K Sbjct: 259 LSDQRKICLLTFAVFPENQEVNRTMLMYWWMGEGILSTKDISSQEGTEEVILKPEDVVKVILKDFTDRNLIEPVEIKRKVEPSSYKMAPFVHASVVLISKEIGLFDMYDIKDKPVMKKSGMHKVCLV-------------------EGSSS---------------------------------QQEAKAKKMEDVDHIETVFNVSERFPDFTFKWFSEDKPTRNKLTLSKVTYQKLKVFYLGRWERTA--KRHIEVENPELMKNLKRMIKLKLLSFQGISRIERLDDAVCKLRDLIILDLRACYNLEKLPDKIDSLKALIYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDEETVCTLAELVHLKKLRKLSISINKENFSIDDVFVAVKSFKKLEKLKVAWG-GINTHPQGKGVD----------------------SEKGDENVKPKENIGILERAATMFRKEKDPTAPELPKTLK--------------------------------KLDLQCFPGEHLPEWLEPDNLLNVEKLYIKGGIKLTGFGKSLPSQNSKCKVTVLRLKFLPKLKVEWRDLSKRYFPELKFLEKYQCPQVSLCPCDGIGIWRK 765
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M5WDT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019132mg PE=4 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.159e-91 Identity = 247/729 (33.88%), Postives = 362/729 (49.66%), Query Frame = 1 Query: 1072 ELGKLCKELDYMIRSFQELENLKNS-------LREPFETLEANVNDIVSDLEKDELRKQVQHNLRVFRNNITRVKXXXXXXXXXXSINSDGNRALQTTFATGEAGD-LPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLI--AGNGKDEMGDLND-TLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQI----------DKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGT-ANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNH-EDGQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189 ++ KL ++L Y+ ++F L+N + S L +P +L ++ D KQ Q LRV I ++K+LI Q Q ++ F + D L L+ +F S FK+F Y L KLCLLCF++FP N IKK L WW+GE + +GK+ + ++ D +K IEP+ KK R +VRS +H P++ A +V ++ F D+ D GN F++ H L+ S + +KLQT+F++++ +PD +S++ +KVLYLGRW + A HIEV+D+EF KG + M++L SL+GIS I +LP +LCKL +LRILDL ACH+LE P+ IG LK LT+LD+SECYLL+++P+ + LSELQVL GF+I C L DLS L LRKL++N + F +E +F L KL IAWG +P + LD K+ + +I++ ++T K + G + + AA E + T G+R I ++R++ G +N E + L KLDLQC+P+ P+WL+P K+K L L RGG+L L + KW LRLKFL K++W E+Q FP+L YLE RCP++TF PCDA+G W K Sbjct: 4 QIEKLRRDLVYIRQAFTGLKNFEESASALFKILLQPLHSLHQLLDQPTQFHIHDSREKQFQSKLRVHSEIIIKLKLLIPSQHQMVLNKANPLSLTGVVFDPNKVLDQLSDLHFSKVFGESPTFKDFRVVYNSLCVTTKLCLLCFAVFPANEVIKKGLLVHWWIGEGFLNPPVDGKETVVEIADGVFEELTKKGCIEPLYKKRR---------SVVRSFKMH---------------PLI-----RSAVIVIAKDVR---FFDF----DSKGNPTAN---------------------------FSWSHWACLMNGSSHLTLANRPDLDPEKLQTIFSVNEAYPDFSEVDWSRLRNVKVLYLGRWHSRANH--HIEVDDVEFFKGLRYMRHLIFFSLRGISRIMELPDSLCKLSSLRILDLSACHNLEIFPETIGLLKMLTHLDMSECYLLEHMPKGIALLSELQVLNGFII------CALHDLSALKKLRKLTINTSREDFPREEELIVFHQFGSLRKLTIAWGGLYLPAIQ---LD----------KRIKLKNIAAQRTTSNTLKSSGGNQTQD------NAAPEPATPT-----GIRNHFRKIPSSLPAFKRIT--GTTTRNQEHFKELEKLDLQCYPQMTAPSWLMPGKLKSLKKLYSRGGQLQNLGQVHENDKWTIRILRLKFLSELKLDWNELQVSFPDLIYLEKYRCPKLTFFPCDASGPWLK 635
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M4DZN4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra021981 PE=4 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 3.514e-86 Identity = 200/603 (33.17%), Postives = 295/603 (48.92%), Query Frame = 1 Query: 1456 QKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFD-YDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSK----------------MTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNT-TKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGR----LGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQ-RFPNLKYLENLRCPRITFCPCDANGVWQ 3186 +K+C+L F++FPEN E+ + L +WW+GE ++ K E + D L F+EK+LIEPV K +++P YK+TP V S ++ +++ F Y KP M S K C+V+ + A + D ++T+FN+S++FPD +WFS+ +KV YLGRWE TA RHIEVE+ E +K K+M L+LLS QGIS I +L +CKL L ILDLRAC++LEKLPD+I SLK LTYLD+++CY++D +P++L+ L L+VLKGFV+ +A + C L +L L LRKLS+ +N +F + + + F LEKL++AWG G + N S A E +L N + K + K P +L E+L+KLDLQCFP +E PT L P K++ L L I+GG G E+ + + LRLKFL K+ W+E+++ FP L++L+ +CP+++FCPCD G+W+ Sbjct: 232 RKICMLSFAVFPENQEVNRTMLMYWWIGEGILPDGIKPEDA-VKDILKEFMEKKLIEPVENKRKVEPNCYKMTPFVHSSVVLISEEIGLFSMYQKGKKPRMKHSDLKKVCLVEESSSQPEAKAKKMPAGD-----------------------------------------------------IETVFNVSERFPDFAFKWFSEDQSSGKKKFSSLSKTAYKMLKVFYLGRWERTAN--RHIEVENPELMKYLKHMTKLKLLSFQGISRIERLDDAVCKLRELIILDLRACYNLEKLPDKIDSLKALTYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDVETFCLLSELKHLKKLRKLSITINKGGEFTVSQLFVDIQDFSNLEKLKVAWG---------------------------------------------GINEHNKAESTSGAVKEFIRSMTRL------PPNSPVTGPKPHKAPKKAAVPSHLP--EKLMKLDLQCFPDAELPTLLEPGKLRTLEKLYIKGGTKLTGFGKSVPEEPTECSVKVLRLKFLPRLKVEWRELRELYFPKLEFLDKYQCPQVSFCPCDGIGIWR 725
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A067ECX4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045877mg PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 2.873e-82 Identity = 179/443 (40.41%), Postives = 265/443 (59.82%), Query Frame = 1 Query: 1357 EAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENL----IAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFS---SCNKACMV----------KSERATASWFADYL---KGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPH-----ENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA-------KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGG 2589 ++ DLP++ + F+ +F EF++ ++ L + Q CLLCF++FPEN+ IKKR L WW+GE I G E + L F EK I PV KK+R S++++P+VRS +I AK+ FF +D +G P M+F + +AC+V + E++ A L K +D + + + + K++ LFNF EN + + +++TLFN+S++FP+ +WFSK+ IKVLYLGRW++T HIE+E ++LKG KNMK LRLLSLQG+SGI +LP+ + L +L ILDLRAC++L+KLPD IG LK LT+LD+SEC+LLD IP++L+ LS+LQVLKGFVI + K C+L DL +L LRKL++N+N+ KF + LA F++L +L+++WG G Sbjct: 211 QSKDLPNMADKTRFKEHDFFIEFKKIFQSLGNDQS-CLLCFAVFPENAVIKKRLLVNWWIGEGFLKERIQGENSAEKA-ADKLLREFEEKGFILPVDKKHRGVANSFRMSPLVRSAVITLAKENNFFHFDSEGIPTMNFQKYETFKRACLVYDHKEGSVPLRLEQSAIKLAAMELLEEKRLGEDNQKAVQFAESMALFNFGEKPEQKAVEFEKIKKLFNFSLSLEEIENKAKDCAMKRGRIETLFNVSEEFPEFKYDWFSKLEKIKVLYLGRWQSTVDDIPHIEIESTDYLKGLKNMKELRLLSLQGMSGIQELPSEISYLTSLEILDLRACYNLDKLPDEIGKLKSLTHLDISECFLLDGIPKKLSLLSKLQVLKGFVISDHAEDDRRWKRWCSLKDLEKLEHLRKLTININSEKFQTENLSTVLA-FKRLLQLKVSWGGGS 650 HSP 2 Score: 108.612 bits (270), Expect = 1.004e-20 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 2893 RLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKW-NADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189 +L KLD QCFP + P+W+ P K L NL IRGGRL L +G +W LRLK+L K++WK +Q+ FP L+YLE +C ++T CPCD G+W+K Sbjct: 689 KLEKLDFQCFPDEKLPSWVHPYSFKNLKNLYIRGGRLNSL---EGSEWETVKVLRLKYLNELKIDWKGLQELFPKLEYLEKFKCHKVTLCPCDGYGIWEK 785
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: V4SSC9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030735mg PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 2.932e-82 Identity = 178/445 (40.00%), Postives = 262/445 (58.88%), Query Frame = 1 Query: 1357 EAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENL----IAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFS---SCNKACMVKSER---------------ATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNF-----PHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA-------KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGG 2589 ++ DLP++ + F+ +F EF++ ++ L + Q CLLCF++FPEN+ IKKR L WW+GE I G E + L F EK I PV KK+R S++++P+VRS +I AK+ FF +D +G P M+F + +AC+V + A + G DK + + + + K++ LFNF EN + + +++TLFN+S++FP+ +WFSK+ IKVLYLGRW++T HIE+E ++LKG KNMK LRLLSLQG+SGI +LP+ + L +L ILDLRAC++L+KLPD IG LK LT+LD+SEC+LLD IP++L+ LS+LQVLKGFVI + K C+L DL +L LRKL++N+N+ KF + LA F++L +L+++WG G Sbjct: 210 QSKDLPNMADKTRFKEHDFFIEFKKIFQSLGNDQS-CLLCFAVFPENAVIKKRLLVNWWIGEGFLKERIQGENSAEKA-ADKLLREFEEKGFILPVDKKHRGVANSFRMSPLVRSAVITLAKENNFFHFDSEGIPTMNFQKYETFKRACLVYDHKEGSVPLRLEQSAIKLAAMELLEEKRLGEDK--QKAVQFAESMALFNFGEKPEQKAVEFEKIKKLFNFNLSLEEIENKAKDCAMKRGRIETLFNVSEEFPEFKYDWFSKLEKIKVLYLGRWQSTVDDIPHIEIESTDYLKGLKNMKELRLLSLQGMSGIQELPSEISYLTSLEILDLRACYNLDKLPDEIGKLKSLTHLDISECFLLDGIPKKLSLLSKLQVLKGFVISDHAEDDRRWKRWCSLKDLEKLEHLRKLTININSEKFQTENLSTVLA-FKRLLQLKVSWGGGS 649 HSP 2 Score: 111.694 bits (278), Expect = 1.176e-21 Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 2893 RLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKW-NADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189 +L KLD QCFP + P+W+ P K L NL IRGGRL L +G +W LRLK+L K++WKE+Q+ FP L+YLE +C ++T CPCD G+W+K Sbjct: 688 KLEKLDFQCFPDEKLPSWVHPYSFKNLKNLYIRGGRLNSL---EGSEWETVKVLRLKYLNELKIHWKELQELFPKLEYLEKFKCHKVTLCPCDGYGIWEK 784
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A0D3AUC4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.448e-82 Identity = 202/607 (33.28%), Postives = 299/607 (49.26%), Query Frame = 1 Query: 1444 LDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIAGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGK-PIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSK----------------MTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTT-KFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGR----LGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQ-RFPNLKYLENLRCPRITFCPCDANGVWQ 3186 L +K+CLL F++FPEN E+ + L +WW+GE ++ K E + L F+EK+LIEPV K +++P YK+TP V S ++ +++ F GK P M S K C+V+ + A + D ++T+FN+S++FPD +WFS+ +KV YLGRWE TA RHIEVE+ E +K K+M L+LLS QGIS I +L +CKL L ILDLRAC++LEKLPD+I SLK LTYLD+++CY+LD +P++L+ L L+VLKGFV+ +A + C LD+L L LRKLS+ +N F + + + F LEKL++AW GG+ + + DK G K + +T L G N + + ++ K P +L ++LVKLDLQCFP +E P+ L P K++ L L I+GG G E + + LRLKFL K+ W+E+++ FP L++L+ + P+++FCPCD G+W+ Sbjct: 231 LTTERKICLLSFAVFPENQEVNRTMLMYWWIGEGILPDGIKPEDA-VKGILKEFMEKKLIEPVENKRKVEPNCYKMTPFVHSSVVLISEEIGLFSMYQKGKTPRMKHSDLKKVCLVEESSSQPEAKAKKMPAGD-----------------------------------------------------IETVFNVSERFPDFAFKWFSEDQSSGKKKFSPLSKTAYKMLKVFYLGRWERTAN--RHIEVENPELMKYLKHMTKLKLLSFQGISRIERLDDAVCKLRELIILDLRACYNLEKLPDKIDSLKALTYLDITDCYMLDRMPKRLSWLDNLEVLKGFVVSDATDVETFCLLDELKHLKKLRKLSITINKGGDFTVFQLFVDIQDFSNLEKLKVAW--GGI-------------------------------NEHNKDKPTAGPVKKFF-------------RTVTLLG------NSPVTEPELHKVPKKDPVPSHLP--KKLVKLDLQCFPEAELPSLLEPGKLRTLEKLYIKGGTKLTGFGKSVPEKPTECSVKVLRLKFLPRLKVEWRELRELYFPKLEFLDKYQSPQVSFCPCDGIGIWR 727
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: A0A067JMW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21335 PE=4 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.758e-80 Identity = 200/543 (36.83%), Postives = 298/543 (54.88%), Query Frame = 1 Query: 1072 ELGKLCKELDYMIRSFQELENLKNSLREPFETLEAN---VNDIVSDLEKDE------LRKQVQHNLRVFRNNITRVKXXXXXXXXXXSINSDGNRALQTTF---ATGEAGDLPHLYGEHIFENSXXXXXXXXXXXGLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLIA---GNGKD-------EMGDLNDTLT---------TFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQA-------RHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVI--LEAKNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWG 2580 +L +L K+L+++ +F++L++L+ ++ E F TL+ +N +V+ +++ + KQ N++ + + ++K+ I + S+ ++ +R ++T A ++ L F++ FK+FEE Y LD +LCLLCF++FPE + +KKR L +WWVGE I G KD DL L F+EK +EPV++K RL +++ +R +I A+KA FF++D G P DFSSC +AC+VK+E + +K N L PH + + Q +KL+TLFN++ +PD +WF +M + VL LGRW+ ++ + RHIEVE IEFLKG KNMK L+ LSLQG+S + LP T+ L NLRILDL ACH+LE LPD+I SLK LT+LD+SECYLLD +P+ L L+ LQVLKGFVI L+ K+S +L DL+ L LRKLS+ + +F + DAL + L KL I WG Sbjct: 196 QLERLEKDLNFIQIAFEKLKDLELNVSEQFITLQKQGQILNRVVNYIQQPQNGTSAFPTKQFHANIKAITDMVMKLKLQIPSPHKM-SLATEAHRTIETVSGLDARNLIDEMLELPSNKKFQDCSAFKDFEESYNSLDTSYRLCLLCFAVFPEGAVVKKRLLMYWWVGEGFIDTQDGGKKDGENEPPNSQNDLKKALAEEVAYKILKKFLEKGFVEPVIRKRRLI--GFRMHAWIRYAVISRAEKAGFFNFDRMGNPTADFSSCQRACLVKTEEVYSRSL--LIKNN---------------------------------HNLQKNPHSESE-QEKLQPEKLRTLFNVNDPYPDFELQWFLRMKNVNVLCLGRWDNSSKKHTEDEEGKRHIEVEGIEFLKGLKNMKYLKYLSLQGVSRVNVLPDTVWNLPNLRILDLNACHNLEALPDKIVSLKNLTHLDISECYLLDCVPKGLESLTNLQVLKGFVISDLKIKHSGSLGDLAGLTKLRKLSIYTSKKEFPTGQELDALRRITGLRKLTIEWG 699 HSP 2 Score: 117.087 bits (292), Expect = 2.357e-23 Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 2791 GGGLRGTANIALMAKKWRRLSM------KGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDG--QKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVW 3183 G L + +AKK++R + G PQ EGLE KLDLQC+P ++ P+WL P K++ L L +RGG L + G KWN L +KFL KM+W+E+ FPNL YLE ++CP++TF PCD +GVW Sbjct: 700 GKSLDKSGTNPTVAKKYKRSTAFKQDNDTGINPQLPEGLE---KLDLQCYPGTKAPSWLRPGKLEHLKKLYVRGGNLSDMGQARGGNDKWNVRILHVKFLSELKMDWRELCDAFPNLIYLEKVKCPKLTFFPCDESGVW 835
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: M5WJ22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016037mg PE=4 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.285e-76 Identity = 165/386 (42.75%), Postives = 221/386 (57.25%), Query Frame = 1 Query: 1441 GLDDRQKLCLLCFSIFPENSEIKKRFLRFWWVGENLI---AGNGKDEMGDLNDTLTTFVEKRLIEPVLKKNRLQPRSYKVTPIVRSCLIHFAKKARFFDYDPDGKPIMDFSSCNKACMVKSERATASWFADYLKGNDKDGNSXXXXXXXXXXXXXXXXXXXXSADLVKLQMLFNFPHENTLIRASQQIDKLQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAK---NSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWG 2580 GLD KLC LCFS+FPEN+ IKK+ L WWVGE I +GK N F+EK LI+PV KK R S + P VR I AK+A FF +D +G P DF+ +AC+VK+E +G+S + P+ R Q+ K+Q++ N+++ D EWFSKM + VL LGRWE++A I+VED EFLKG KNM++LR LSL+G+S I +LP ++CKL NLRIL+L C DLE+LP IGSLK LT+LD+ ECYL+ ++P+ L LS+L+VLKGFVI E + N C L DLS L +LRKLS++V+ T +LA+F+KL+ L I+W Sbjct: 159 GLDVTLKLCFLCFSVFPENAVIKKKVLVHWWVGEGFIDTLGTSGKTAEDTANQFFNDFIEKGLIKPVYKKRRPSADSCSMEPSVRYAAIKLAKRAGFFSFDSNGNPTEDFTCSRRACLVKTE----------------EGSS-----------------------------VHELPY-----RLEQE--KVQSIINVNELNLDFRPEWFSKMKYVAVLQLGRWESSAKHL--IQVEDSEFLKGLKNMRHLRYLSLRGVSRITELPASICKLSNLRILNLNGCVDLEQLPQGIGSLKNLTHLDMYECYLISHMPKGLALLSQLRVLKGFVIGEPRPGGNYCKLADLSGLENLRKLSIHVDKTSDAAKRELFSLAEFKKLQSLSISWS 490 HSP 2 Score: 100.523 bits (249), Expect = 2.303e-18 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 2896 LVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQK 3189 L KL+L FP S+ P WL+ + L L IRGG L L H W + +RLKFL +M+W+++Q+ FP+L YLE +CP+++F PCD NGVW+K Sbjct: 536 LKKLNLHYFPGSKMPDWLMQWDLTTLKKLYIRGGSLSNLCHGKEDNWAVEVVRLKFLEKLQMDWRKLQELFPSLTYLEIDKCPKLSFIPCDENGVWKK 633
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: D7MU09_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_356455 PE=4 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 4.961e-75 Identity = 162/404 (40.10%), Postives = 228/404 (56.44%), Query Frame = 1 Query: 2002 LQTLFNLSKQFPDLPTEWFSKMTGIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEA--KNSCTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGL----ERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGGRLGYLNHED---GQKWNADTLRLKFLVNFKMNWKEMQQRFPNLKYLENLRCPRITFCPCDANGVWQ 3186 LQT+FN S++FPD +WF M I+VLYLGRWE A RHIEVE EFLK K++KNLRL S QGISGI K+ ++C L+ L ILDLRAC+DL+ LP+ IGSL+ L YLD+SEC LD +P + KLS LQVLKGFVI ++ +++C + L +LRKLS+ + +F + ++L ++LE L AW P + +GEE +K AKL L G N KKW ++ ++ Q+++ + L KL+L+CFP +EPP+WL P+ +K+L LSI+GG+L ++ E KW + LRLK+L FK+ W++++ FP + LE +CP+I FCP D NGVW+ Sbjct: 422 LQTVFNSSERFPDFTFKWFPLMDSIRVLYLGRWERMA--ERHIEVESTEFLKNMKSLKNLRLASFQGISGIKKIDNSICALQKLMILDLRACYDLQVLPNDIGSLENLIYLDVSECLKLDCMPDRFEKLSGLQVLKGFVISQSDDEHNCA---VKHLVNLRKLSITIKNYRFKAENLIESLRDLKQLESLTFAWR-ARFPVDD-----------------------------------RRGEE----------------TKEAKL---LMGMGN---QTKKW---GIRWQKDQSIDDTYKFPDSLKKLELECFPETEPPSWLNPKDLKELKRLSIKGGKLSRMSDESRNTEDKWAVEILRLKYLHEFKVEWRDLKDLFPKMTLLEKYKCPKIAFCPTDGNGVWR 759
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Match: Q8LPR3_ARATH (AT5g45500/MFC19_17 OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.100e-73 Identity = 159/423 (37.59%), Postives = 226/423 (53.43%), Query Frame = 1 Query: 1987 QQIDKLQTLFNLSKQFPDLPTEWFS-------KMT-------GIKVLYLGRWEATAGQARHIEVEDIEFLKGFKNMKNLRLLSLQGISGIPKLPTTLCKLENLRILDLRACHDLEKLPDRIGSLKKLTYLDLSECYLLDYIPQQLNKLSELQVLKGFVILEAKNS---CTLDDLSELPSLRKLSVNVNTTKFNIDEAGDALAKFQKLEKLRIAWGWGGMPRKEDSTLDXXXXXXXXXXXXXXXXXXXXXXXXXXTDKVNKGEEKGNWERSAVAAAGEANSKTAKLGGGLRGTANIALMAKKWRRLSMKGREPQNLEGLERLVKLDLQCFPRSEPPTWLVPRKMKKLTNLSIRGG----RLGYLNHEDGQKWNADTLRLKFLVNFKMNWKEMQQR-FPNLKYLENLRCPRITFCPCDANGVWQK 3189 + +D ++T+FN+S++FPD +WFS K+T +KV YLGRWE TA RHIEVE+ E +K K M L+LLS QGIS I +L +CKL +L ILDLRAC++LEKLPD+I SLK L YLD+++CY++D +P++L+ L L+VLKGFV+ +A + CTL +L L LRKLS+++N F+ID+ A+ F+KLEKL++AWG G + +D ++ + V E G ER+A E + +L L+ KLDLQCFP P WL P + + L I+GG G K LRLKFL K+ W+++ +R FP LK+LE +CP+++ CPCD G+W+K Sbjct: 2 EDVDHIETVFNVSERFPDFTFKWFSEDKPTRNKLTLSKVTYQKLKVFYLGRWERTA--KRHIEVENPELMKNLKRMIKLKLLSFQGISRIERLDDAVCKLRDLIILDLRACYNLEKLPDKIDSLKALIYLDITDCYMIDRMPKRLSWLDNLEVLKGFVVSDATDEETVCTLAELVHLKKLRKLSISINKENFSIDDVFVAVKSFKKLEKLKVAWG-GINTHPQGKGVD----------------------SEKGDENVKPKENIGILERAATMFRKEKDPTAPELPKTLK--------------------------------KLDLQCFPGEHLPEWLEPDNLLNVEKLYIKGGIKLTGFGKSLPSQNSKCKVTVLRLKFLPKLKVEWRDLSKRYFPELKFLEKYQCPQVSLCPCDGIGIWRK 367 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 5
BLAST of g.barbadense_cottongen_reftransV1_0094858 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094858 ID=g.barbadense_cottongen_reftransV1_0094858; Name=g.barbadense_cottongen_reftransV1_0094858; organism=Gossypium barbadense; type=contig; length=3382bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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