g.barbadense_cottongen_reftransV1_0094852, g.barbadense_cottongen_reftransV1_0094852 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094852
Unique Nameg.barbadense_cottongen_reftransV1_0094852
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1955
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At02chromosomeg.barbadense_cottongen_reftransV1_0094852:1..1906 .
At02:32361643..32384254 +
Homology
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_SCHPO (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis3 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.695e-81
Identity = 96/152 (63.16%), Postives = 118/152 (77.63%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID WKIE F    + +  LE SSF+T+FP+YREKYL+E WP V  AL ++GI   L+LVEGSMTV TTRKT DPY I+ ARDLIKLL+RSVP PQA+KI+ D + CDIIKIGN++RNKERFVKRRQRL+G N  TLK   +++LT+
Sbjct:   26 WDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKA--LELLTQ 174

HSP 2 Score: 130.568 bits (327), Expect = 6.695e-81
Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = -1 
Query:  618 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX-XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQ 1091
            ++ALE+LT CYILVQG TVA MG +KGLK+VRRIVEDC+ N +HP+YHIK LM+K+EL KDP L NE+WDRFLP FKK+NV  +K     +       PP Q PSK+D E+ESGEYFL +++K  KK  EK+E+Q +K  E +++R  AF+PP+E  K+
Sbjct:  166 LKALELLTQCYILVQGTTVAVMGGYKGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKK 323
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEASZ (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEASV (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain VIN 13) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAST (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS8 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS6 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS1 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 
Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627
            WD D +ID+WKIE+F    N  G    E SSF T+FP+YRE YL+  W  V  AL ++ IA  L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK   +++LT+
Sbjct:   11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161

HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 
Query:  738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091
            ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV  KK K         +    P Q P K+D E+ESGEYFLS
Sbjct:  153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_BOVIN (KRR1 small subunit processome component homolog OS=Bos taurus GN=KRR1 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.968e-76
Identity = 94/144 (65.28%), Postives = 114/144 (79.17%), Query Frame = -2 
Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606
            D WK   F    NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ I A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV   QAI+IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP  STLK   +++LT
Sbjct:   38 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 179

HSP 2 Score: 117.087 bits (292), Expect = 4.968e-76
Identity = 78/156 (50.00%), Postives = 113/156 (72.44%), Query Frame = -1 
Query:  630 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE 1091
            ++ALE+LT+CYI+VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD  L++++W+RFLP FK KNV  +K   K+         PPPQ  S+ID+EL SGEYFL   +K  +K E  + KQA+  ++ + +R  AF+PPKE
Sbjct:  172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALSKRQEERNKAFIPPKE 326
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_MOUSE (KRR1 small subunit processome component homolog OS=Mus musculus GN=Krr1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.588e-76
Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = -2 
Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606
            D WK   F    NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ + A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV   QA++IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP  STLK   +++LT
Sbjct:   37 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 178

HSP 2 Score: 117.087 bits (292), Expect = 6.588e-76
Identity = 77/156 (49.36%), Postives = 112/156 (71.79%), Query Frame = -1 
Query:  630 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE 1091
            ++ALE+LT+CY++VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD  L++++W+RFLP FK KNV  +K   K+         PPPQ  S+ID+EL SGEYFL   +K  +K E  + KQA+   + + +R  AF+PPKE
Sbjct:  171 LKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALTKRQEERNKAFIPPKE 325
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_HUMAN (KRR1 small subunit processome component homolog OS=Homo sapiens GN=KRR1 PE=1 SV=4)

HSP 1 Score: 189.504 bits (480), Expect = 2.960e-75
Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = -2 
Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606
            D WK   F    NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ + A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV   QA++IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP  STLK   +++LT
Sbjct:   38 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 179

HSP 2 Score: 116.316 bits (290), Expect = 2.960e-75
Identity = 82/173 (47.40%), Postives = 120/173 (69.36%), Query Frame = -1 
Query:  582 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE-PVKQDSNKSENKEEDV 1091
            ++ALE+LT+CYI+VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD  L++++W+RFLP FK KNV  +K   K+         PPPQ  S+ID+EL SGEYFL   +K  +K E  + KQA+  ++ + +R  AF+PPKE P+ +    S   + DV
Sbjct:  172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKEASTETKIDV 343
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: A0A072UG01_MEDTR (KRR1 small subunit processome component OS=Medicago truncatula GN=MTR_5g087520 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.640e-116
Identity = 125/151 (82.78%), Postives = 141/151 (93.38%), Query Frame = -2 
Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627
            WD+DPNID WK+EKFDPSWN  G+LEVSSFST+FP+YREKYLQEAWP VKS+LKE+GI+AELNLVEGSMTVSTTRKT+DPY+I+KARDLI+LLSRSVPAPQAIK+LDDEMQCDIIKI  LVRNKERFVKRRQ LVGPNSSTLK   +++LT
Sbjct:   70 WDDDPNIDHWKVEKFDPSWNESGMLEVSSFSTLFPQYREKYLQEAWPLVKSSLKEFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRSVPAPQAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKA--LEILT 218

HSP 2 Score: 180.259 bits (456), Expect = 2.640e-116
Identity = 144/199 (72.36%), Postives = 171/199 (85.93%), Query Frame = -1 
Query:  495 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYI 1091
            ++ALEILT CYILVQGNTV+ MGS+KGLKQVRRIVE+C+ NKMHPVY+IKILMMKKELEKDPAL  ENWDRFLP F KKNV+ KKV +K KKPYTPFPPPQQPSK+D +LE+GEYFLS+KKK AKKW+E+Q +QA+KTAENKRKR+ +FVPPKEP     N SE+   +VA +A S K+KA++FGK+KS +NINAE YI
Sbjct:  211 LKALEILTGCYILVQGNTVSVMGSYKGLKQVRRIVEECMLNKMHPVYNIKILMMKKELEKDPALAQENWDRFLPKFNKKNVKQKKVNAKPKKPYTPFPPPQQPSKVDIQLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGN-SEDASNNVAEMAMSLKEKARKFGKRKSEENINAETYI 408
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: G7KHH0_MEDTR (KRR1 small subunit processome component OS=Medicago truncatula GN=MTR_5g087520 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.917e-116
Identity = 125/151 (82.78%), Postives = 141/151 (93.38%), Query Frame = -2 
Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627
            WD+DPNID WK+EKFDPSWN  G+LEVSSFST+FP+YREKYLQEAWP VKS+LKE+GI+AELNLVEGSMTVSTTRKT+DPY+I+KARDLI+LLSRSVPAPQAIK+LDDEMQCDIIKI  LVRNKERFVKRRQ LVGPNSSTLK   +++LT
Sbjct:   69 WDDDPNIDHWKVEKFDPSWNESGMLEVSSFSTLFPQYREKYLQEAWPLVKSSLKEFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRSVPAPQAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKA--LEILT 217

HSP 2 Score: 180.644 bits (457), Expect = 2.917e-116
Identity = 144/199 (72.36%), Postives = 171/199 (85.93%), Query Frame = -1 
Query:  495 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYI 1091
            ++ALEILT CYILVQGNTV+ MGS+KGLKQVRRIVE+C+ NKMHPVY+IKILMMKKELEKDPAL  ENWDRFLP F KKNV+ KKV +K KKPYTPFPPPQQPSK+D +LE+GEYFLS+KKK AKKW+E+Q +QA+KTAENKRKR+ +FVPPKEP     N SE+   +VA +A S K+KA++FGK+KS +NINAE YI
Sbjct:  210 LKALEILTGCYILVQGNTVSVMGSYKGLKQVRRIVEECMLNKMHPVYNIKILMMKKELEKDPALAQENWDRFLPKFNKKNVKQKKVNAKPKKPYTPFPPPQQPSKVDIQLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGN-SEDASNNVAEMAMSLKEKARKFGKRKSEENINAETYI 407
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: I3SJ12_MEDTR (KRR1 small subunit processome component OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 6.325e-116
Identity = 125/151 (82.78%), Postives = 141/151 (93.38%), Query Frame = -2 
Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627
            WD+DPNID WK+EKFDPSWN  G+LEVSSFST+FP+YREKYLQEAWP VKS+LKE+GI+AELNLVEGSMTVSTTRKT+DPY+I+KARDLI+LLSRSVPAPQAIK+LDDEMQCDIIKI  LVRNKERFVKRRQ LVGPNSSTLK   +++LT
Sbjct:   25 WDDDPNIDHWKVEKFDPSWNESGMLEVSSFSTLFPQYREKYLQEAWPLVKSSLKEFGISAELNLVEGSMTVSTTRKTKDPYIIVKARDLIRLLSRSVPAPQAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKA--LEILT 173

HSP 2 Score: 179.489 bits (454), Expect = 6.325e-116
Identity = 144/199 (72.36%), Postives = 171/199 (85.93%), Query Frame = -1 
Query:  495 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYI 1091
            ++ALEILT CYILVQGNTV+ MGS+KGLKQVRRIVE+C+ NKMHPVY+IKILMMKKELEKDPAL  ENWDRFLP F KKNV+ KKV +K KKPYTPFPPPQQPSK+D +LE+GEYFLS+KKK AKKW+E+Q +QA+KTAENKRKR+ +FVPPKEP     N SE+   +VA +A S K+KA++FGK+KS +NINAE YI
Sbjct:  166 LKALEILTGCYILVQGNTVSVMGSYKGLKQVRRIVEECMLNKMHPVYNIKILMMKKELEKDPALAQENWDRFLPKFNKKNVKQKKVNAKPKKPYTPFPPPQQPSKVDIQLETGEYFLSDKKKSAKKWQERQVQQAEKTAENKRKRDESFVPPKEPANLVGN-SEDASNNVAEMAMSLKEKARKFGKRKSEENINAETYI 363
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: A0A0B2NPY8_GLYSO (KRR1 small subunit processome component OS=Glycine soja GN=glysoja_038554 PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.094e-115
Identity = 141/171 (82.46%), Postives = 157/171 (91.81%), Query Frame = -2 
Query: 1175 EKVNLEQXXXXXXXXXXXXPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1687
            E  +LEQK+K KGKHDKPKPWD+DPNID WKI+KFDPSWN  G+LEVSSFST+FP+YREKYLQEAWP VKS+LKE+G+A ELNLVEGSMTVSTTRKTRDPY+IIKARDLIKLLSRS+PAPQAIKILDDEMQCDIIKI  +VRNKERFVKRRQ LVGPNSSTLK   +++LT
Sbjct:   14 EPRSLEQKEKRKGKHDKPKPWDDDPNIDHWKIDKFDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSSLKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSIPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA--LEILT 182

HSP 2 Score: 176.022 bits (445), Expect = 2.094e-115
Identity = 154/217 (70.97%), Postives = 183/217 (84.33%), Query Frame = -1 
Query:  441 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRKSKHT 1091
            ++ALEILT CYILVQGNTVAAMGSFKGLKQVRRIVE+C+ NKMHPVY+IK+LMMKKELEKDPAL  ENWDRFLP FKKKNV+ KKV +K+KKPYTPFPPPQQPSKID +LE+GEYFLS K+K AK W+EKQEKQA+KTAENKRKRE AF+PPKEP     +KSE+   +VA +A S K+K K+FGK+KS +NI+AE YI   ++EQ S +K K + +
Sbjct:  175 LKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VDKSEDANNNVADMAISLKKKTKKFGKRKSEENIDAETYIVG-SSEQASGKKPKKQRS 389
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: C6TDU3_SOYBN (KRR1 small subunit processome component OS=Glycine max PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.165e-115
Identity = 141/171 (82.46%), Postives = 157/171 (91.81%), Query Frame = -2 
Query: 1175 EKVNLEQXXXXXXXXXXXXPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1687
            E  +LEQK+K KGKHDKPKPWD+DPNID WKI+KFDPSWN  G+LEVSSFST+FP+YREKYLQEAWP VKS+LKE+G+A ELNLVEGSMTVSTTRKTRDPY+IIKARDLIKLLSRS+PAPQAIKILDDEMQCDIIKI  +VRNKERFVKRRQ LVGPNSSTLK   +++LT
Sbjct:   14 EPRSLEQKEKRKGKHDKPKPWDDDPNIDHWKIDKFDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSSLKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSIPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA--LEILT 182

HSP 2 Score: 176.022 bits (445), Expect = 2.165e-115
Identity = 154/217 (70.97%), Postives = 183/217 (84.33%), Query Frame = -1 
Query:  441 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRKSKHT 1091
            ++ALEILT CYILVQGNTVAAMGSFKGLKQVRRIVE+C+ NKMHPVY+IK+LMMKKELEKDPAL  ENWDRFLP FKKKNV+ KKV +K+KKPYTPFPPPQQPSKID +LE+GEYFLS K+K AK W+EKQEKQA+KTAENKRKRE AF+PPKEP     +KSE+   +VA +A S K+K K+FGK+KS +NI+AE YI   ++EQ S +K K + +
Sbjct:  175 LKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VDKSEDANNNVADMAISLKKKTKKFGKRKSEENIDAETYIVG-SSEQASGKKPKKQRS 389
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 20
Match NameE-valueIdentityDescription
KRR1_SCHPO6.695e-8163.16KRR1 small subunit processome component homolog OS... [more]
KRR1_YEASZ3.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_YEASV3.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_YEAST3.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_YEAS83.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_YEAS63.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_YEAS13.903e-7862.99KRR1 small subunit processome component OS=Sacchar... [more]
KRR1_BOVIN4.968e-7665.28KRR1 small subunit processome component homolog OS... [more]
KRR1_MOUSE6.588e-7663.89KRR1 small subunit processome component homolog OS... [more]
KRR1_HUMAN2.960e-7563.89KRR1 small subunit processome component homolog OS... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A072UG01_MEDTR2.640e-11682.78KRR1 small subunit processome component OS=Medicag... [more]
G7KHH0_MEDTR2.917e-11682.78KRR1 small subunit processome component OS=Medicag... [more]
I3SJ12_MEDTR6.325e-11682.78KRR1 small subunit processome component OS=Medicag... [more]
A0A0B2NPY8_GLYSO2.094e-11582.46KRR1 small subunit processome component OS=Glycine... [more]
C6TDU3_SOYBN2.165e-11582.46KRR1 small subunit processome component OS=Glycine... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
IPR024166Ribosomal RNA assembly KRR1PANTHERPTHR12581HIV-1 REV BINDING PROTEIN 2, 3coord: 3..216
IPR004088K Homology domain, type 1SUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 2..74

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094852 ID=g.barbadense_cottongen_reftransV1_0094852; Name=g.barbadense_cottongen_reftransV1_0094852; organism=Gossypium barbadense; type=contig; length=1955bp
CCCCTCAAAAGGTTACATGATAAGAAATAATCAATAATTATATTCAAGTT
CCAACATGCCTCATGTGCAAACCTAATAAATAAGCTCGTACTTGAATCTA
AATGTACAAAAAATGTGCAAGCTAGAAAGTGTCAAGACATTCCAATGGGC
ACCAAAACATTGACTAAAAATCCAAATGTACAACAATTTCCATGATTCAA
ACTCTGAAACTATGATATCATGTAAGTTATATGATCAATTATCCCAAAAA
CATAGTCGGGTGATCAACTATATTTAAGCTCCAACATGATATATCAAGGT
TTTTTTACTAGCCTAATATCAGCCTTTTTTCTCAACAATTGCACATCCAC
ACCACGGATTGCCAAAAGCCAGCAAATATTTAGCAAACTTTGTCATACCA
TGAACTTGTCTACAACAAACTTTCTAGTTTACCTATACTAGGTATGCTTG
GATTTCCTTTTCCTTTTGGAAGGCTGTTCGGCAGCAGGGGCAGAAATATA
TTCTTCAGCATTGATATTTTGCAAAGATTTTTGCTTTCCGAATTCCTTGG
CCTTTTGCTTCGAGGACTTAGCAAGGGCAGCAACATCTTCCTCCTTGTTC
TCTGACTTGTTAGAATCTTGCTTCACGGGTTCCTTGGGAGGAACAAATGC
TGCTTCTCTTTTTCTTTTGTTTTCAGCTGTTTTCTGTGCCTGCTTCTCTT
GCTTCTCTTCCCACTTCTTCGCTAATTTCTTTTTCTCACTCAAGAAGTAT
TCTCCAGATTCCAGTTCTTGATCAATCTTACTAGGTTGCTGAGGAGGAGG
GAATGGTGTATATGGTTTCTTCTCTTTACTCTTAACCTTCTTCGTTTGAA
CATTTTTCTTCTTGAATGTTGGAAGAAACCTATCCCAGTTTTCATTTTTG
AGTGCTGGATCCTTCTCAAGCTCTTTCTTCATCATGAGAATCTTGATATG
GTATACTGGATGCATCTTATTTTCTACGCAGTCCTCCACAATCCTCCTGA
CTTGTTTCAAACCTTTAAATGAACCCATAGCAGCAACAGTGTTTCCCTGA
ACAAGAATGTAGCAGCTTGTCAATATTTCAAGTGCCTGCATCCACTAATG
AAGGTGATTATTTTATAGTAATAGTATTTTCTCATGCCTCAACATAGCCT
TATAAGGGGATTATTTTAGAATCGTGTTAAGACATCAATCATACAAACCT
TCAAAGTCGAAGAATTTGGCCCCACAAGGCGCTGCCTTCTTTTAACAAAT
CGTTCCTTATTGCGAACCAAGTTTCCAATTTTTATGATGTCACACTGCAT
TTCATCATCAAGTATTTTGATGGCCTGAGGGGCAGGAACACTTCTCGATA
GAAGCTTGATGAGATCCCTGGCCTTAATGATAACATATGGATCCCTAGTT
TTTCTTGTTGTTGAAACTGTCATAGACCCTTCAACCAAGTTGAGCTCAGC
AGCAATACCATATTCTTTCAAAGCAGATTTAACCTTTGGCCAAGCTTCTT
GCAAGTATTTTTCTCGGTAACGAGGGAAGATGGTGGAAAAAGAGCTGACT
TCCAGTAACCCATCGGGGTTCCAAGAAGGGTCAAACTTTTCAATCTTCCA
ACGGTCTATGTTTGGGTCTTCGTCCCATGGCTTTGGCTTATCGTGTTTCC
CTTTATGCTTCTTTTTCTGTTCCAGATTTACTTTTTCTGCATTCTCTACC
TCCATTTTAATTTTCAAAAACCCTGTAATTGCGTTAAATAAAGAAACAAA
AGTTACTTCTGTTTGTCGCAGCCTTCGTTATCCGGACTCGGCAACTTGTG
GTGCAGTAGCCGTGTCGACACGATACACACTGGATACGGGTCAGATCCGG
CATAAACCAGCGGACACGGCAGTGGGTGAGAACTGTGATGAAAAGAGAAG
AGAAAAAAAACTTACTGCAGGGACGAGACAGAAGAGGGACGATGGTAGGA
GGAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR024166rRNA_assembly_KRR1
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding