g.barbadense_cottongen_reftransV1_0094852, g.barbadense_cottongen_reftransV1_0094852 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_SCHPO (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis3 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.695e-81 Identity = 96/152 (63.16%), Postives = 118/152 (77.63%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID WKIE F + + LE SSF+T+FP+YREKYL+E WP V AL ++GI L+LVEGSMTV TTRKT DPY I+ ARDLIKLL+RSVP PQA+KI+ D + CDIIKIGN++RNKERFVKRRQRL+G N TLK +++LT+ Sbjct: 26 WDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKA--LELLTQ 174 HSP 2 Score: 130.568 bits (327), Expect = 6.695e-81 Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = -1 Query: 618 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX-XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQ 1091 ++ALE+LT CYILVQG TVA MG +KGLK+VRRIVEDC+ N +HP+YHIK LM+K+EL KDP L NE+WDRFLP FKK+NV +K + PP Q PSK+D E+ESGEYFL +++K KK EK+E+Q +K E +++R AF+PP+E K+ Sbjct: 166 LKALELLTQCYILVQGTTVAVMGGYKGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKK 323
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEASZ (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=KRR1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEASV (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain VIN 13) GN=KRR1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAST (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS8 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS6 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) GN=KRR1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_YEAS1 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) GN=KRR1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.903e-78 Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = -2 Query: 1172 WDEDPNIDRWKIEKFDPSWNPDG--LLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLTR 1627 WD D +ID+WKIE+F N G E SSF T+FP+YRE YL+ W V AL ++ IA L+LVEGSMTV TTRKT DP +I+KARDLIKLL+RSVP PQA+KIL D+M CD+IKIGN V NKERFVKRRQRLVGPN +TLK +++LT+ Sbjct: 11 WDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKA--LELLTK 161 HSP 2 Score: 126.331 bits (316), Expect = 3.903e-78 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 738 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXX---XXXXXXKIDQELESGEYFLS 1091 ++ALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC++N +HP+YHIK LM+K+EL K P L NE+W RFLP FKK+NV KK K + P Q P K+D E+ESGEYFLS Sbjct: 153 LKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLS 272
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_BOVIN (KRR1 small subunit processome component homolog OS=Bos taurus GN=KRR1 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 4.968e-76 Identity = 94/144 (65.28%), Postives = 114/144 (79.17%), Query Frame = -2 Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606 D WK F NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ I A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV QAI+IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP STLK +++LT Sbjct: 38 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 179 HSP 2 Score: 117.087 bits (292), Expect = 4.968e-76 Identity = 78/156 (50.00%), Postives = 113/156 (72.44%), Query Frame = -1 Query: 630 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE 1091 ++ALE+LT+CYI+VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD L++++W+RFLP FK KNV +K K+ PPPQ S+ID+EL SGEYFL +K +K E + KQA+ ++ + +R AF+PPKE Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALSKRQEERNKAFIPPKE 326
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_MOUSE (KRR1 small subunit processome component homolog OS=Mus musculus GN=Krr1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.588e-76 Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = -2 Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606 D WK F NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ + A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV QA++IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP STLK +++LT Sbjct: 37 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 178 HSP 2 Score: 117.087 bits (292), Expect = 6.588e-76 Identity = 77/156 (49.36%), Postives = 112/156 (71.79%), Query Frame = -1 Query: 630 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE 1091 ++ALE+LT+CY++VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD L++++W+RFLP FK KNV +K K+ PPPQ S+ID+EL SGEYFL +K +K E + KQA+ + + +R AF+PPKE Sbjct: 171 LKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALTKRQEERNKAFIPPKE 325
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Match: KRR1_HUMAN (KRR1 small subunit processome component homolog OS=Homo sapiens GN=KRR1 PE=1 SV=4) HSP 1 Score: 189.504 bits (480), Expect = 2.960e-75 Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = -2 Query: 1175 DRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1606 D WK F NP GLLE SSF+T+FP+YRE YL+E WP V+ AL E+ + A L+L+EGSMTV TT+KT DPY+II+ARDLIKLL+RSV QA++IL D++ CDIIKIG+LVRNKERFVKRRQRL+GP STLK +++LT Sbjct: 38 DGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKA--LELLT 179 HSP 2 Score: 116.316 bits (290), Expect = 2.960e-75 Identity = 82/173 (47.40%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 582 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXX--XXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKE-PVKQDSNKSENKEEDV 1091 ++ALE+LT+CYI+VQGNTV+A+G F GLK+VR++V D ++N +HP+Y+IK LM+K+EL KD L++++W+RFLP FK KNV +K K+ PPPQ S+ID+EL SGEYFL +K +K E + KQA+ ++ + +R AF+PPKE P+ + S + DV Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKN-IHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKEASTETKIDV 343
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: R0FF04_9BRAS (KRR1 small subunit processome component OS=Capsella rubella GN=CARUB_v10001149mg PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.196e-118 Identity = 120/151 (79.47%), Postives = 141/151 (93.38%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD+DPNIDRW +E+FDP+ NP G+L+ S FST+FP+YREKYLQE+WP+++SALKEYG+A ELNLV+GSMTVSTTRKTRDPY+I+KARDLIKLLSRSVPAPQAIKILDDE+QCDIIKI NLVRN+ERFVKRRQRLVGPNSSTLK +++LT Sbjct: 33 WDDDPNIDRWTVERFDPASNPTGMLDRSEFSTLFPQYREKYLQESWPRIESALKEYGVACELNLVKGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEVQCDIIKIANLVRNRERFVKRRQRLVGPNSSTLKA--LEILT 181 HSP 2 Score: 194.126 bits (492), Expect = 2.196e-118 Identity = 142/214 (66.36%), Postives = 180/214 (84.11%), Query Frame = -1 Query: 453 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXX-XXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRK 1091 ++ALEILT+CYILVQG+TVAAMG FKGLKQ+R+IVEDCV+NKMHPVYHIK LM+KKEL+KDPAL E+WDRFLPTFKKKNV+ KK KSKEKKPYTPFPPPQ PSKID +LESGEYF+S+KKK KKW+EKQEKQ +K+ ENKRKR+A+F+PP+EPV SN SE+ + D+ L + + ++K+ + +NAE+YI+AP+A++PSK+ +K Sbjct: 174 LKALEILTNCYILVQGSTVAAMGPFKGLKQIRKIVEDCVQNKMHPVYHIKELMIKKELQKDPALATESWDRFLPTFKKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDLQLESGEYFMSDKKKSEKKWQEKQEKQTEKSTENKRKRDASFLPPEEPVNNKSNNSEDGKSDITELTYSLKSKTKELKKQKKTHERVNAEDYIAAPSADKPSKKSKK 387
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: M0SMA3_MUSAM (KRR1 small subunit processome component OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.704e-118 Identity = 129/151 (85.43%), Postives = 142/151 (94.04%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WDEDPNIDRWKIEKFDPSWN G+LEVSSFST+FP+YREKYLQE WP VKSALKE+G++ ELNLVEGSMTVSTTRKTRDP+VIIKARDLIKLLSRSVPAPQAIKIL+DEMQCDIIKIGNL+RNKERFVKRR+RL+GPN STLK I++LT Sbjct: 35 WDEDPNIDRWKIEKFDPSWNEGGMLEVSSFSTLFPQYREKYLQEVWPMVKSALKEHGVSCELNLVEGSMTVSTTRKTRDPFVIIKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGNLIRNKERFVKRRERLLGPNLSTLKA--IEILT 183 HSP 2 Score: 183.341 bits (464), Expect = 2.704e-118 Identity = 148/219 (67.58%), Postives = 178/219 (81.28%), Query Frame = -1 Query: 441 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQ--DSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRKSKHT 1091 ++A+EILT CY+LVQGNTV+AMGSFKGLKQVRRIVEDC++N++HPVYHIK L+MK+EL K+PAL NENWDRFLP FKKKNV+ +KVK+KEKKPYTPFPPPQQPSKID +LESGEYFLS+KKK A+KW+EKQEKQ +K AENKRKREAAF+PPKEP DSN S+ D+AA+ KS K KAK K K+ N+ AE YI+ + + K+ R S T Sbjct: 176 LKAIEILTGCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNQLHPVYHIKTLLMKRELAKNPALANENWDRFLPKFKKKNVKQRKVKAKEKKPYTPFPPPQQPSKIDLQLESGEYFLSDKKKSARKWQEKQEKQTEKAAENKRKREAAFIPPKEPSSHLTDSNNSDKNTSDLAAMTKSLKDKAKGLKKLKAHDNVRAESYIADAESSRRKKKHRSSSET 394
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: A0A087G5Q9_ARAAL (KRR1 small subunit processome component OS=Arabis alpina GN=AALP_AA8G081600 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.908e-118 Identity = 129/151 (85.43%), Postives = 146/151 (96.69%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD+DPNIDRW IEKFDPSWNP+G+LEVSSFST+FP+YREKYLQ++WP+V+SALKEYGIA +LNLVEGSMTVSTTRKTRDPY+++KARDLIKLLSRSVPAPQAIKIL+DEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLK +++LT Sbjct: 29 WDDDPNIDRWTIEKFDPSWNPNGMLEVSSFSTLFPQYREKYLQDSWPRVESALKEYGIACKLNLVEGSMTVSTTRKTRDPYIVVKARDLIKLLSRSVPAPQAIKILEDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKA--LEILT 177 HSP 2 Score: 176.407 bits (446), Expect = 5.908e-118 Identity = 137/209 (65.55%), Postives = 167/209 (79.90%), Query Frame = -1 Query: 477 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVK----QDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAE 1091 ++ALEILT+CYILVQG+TVAAMG FKGLKQ+RRIVEDCVENK+HPVYHIKILMMKKELEKDPAL E+WDRFLP FKKKNV+ KK KSKEKKPYTPFPPPQ PSK+D +LESGEYFLS+KKK K W+EKQEKQ +K+ ENKRKR+A+FVPP+EP+K + +KE + + ++K+ + +NAEEYI+ P+A+ Sbjct: 170 LKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVENKLHPVYHIKILMMKKELEKDPALATESWDRFLPKFKKKNVKQKKPKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDKKKSEKMWQEKQEKQTEKSTENKRKRDASFVPPEEPLKINNNNSNKSENDKEGLTELTKSLKSKTKEFKKQKKTHEKVNAEEYIAVPSAD 378
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: Q9FT93_ARATH (KRR1 small subunit processome component OS=Arabidopsis thaliana GN=F8L15_150 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 9.650e-118 Identity = 125/151 (82.78%), Postives = 142/151 (94.04%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD+DPNIDRW IEKFDP+WNP G+ E S+FST+FP+YREKYLQE WP+V+SALKEYG+A +LNLVEGSMTVSTTRKTRDPY+I+KARDLIKLLSRSVPAPQAIKIL+DE+QCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLK +++LT Sbjct: 30 WDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKA--LEILT 178 HSP 2 Score: 183.341 bits (464), Expect = 9.650e-118 Identity = 138/205 (67.32%), Postives = 171/205 (83.41%), Query Frame = -1 Query: 486 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDS--NKSENKEEDVXX-XXXXXXXXXKEFGKQKSLQNINAEEYISAP 1091 ++ALEILT+CYILVQG+TVAAMG FKGLKQ+RRIVEDCV+N MHPVYHIK LMMKKELEKDPAL NE+WDRFLPTF+KKNV+ KK KSKEKKPYTPFPPPQ PSKID +LESGEYF+S+KKK KKW+EKQEKQ++K+ ENKRKR+A+F+PP+EP+ +S NKSE+ + D+ + + ++K+ + +NAEEYI+ P Sbjct: 171 LKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGP 375
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: I1JIP3_SOYBN (KRR1 small subunit processome component OS=Glycine max PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 1.450e-117 Identity = 147/184 (79.89%), Postives = 162/184 (88.04%), Query Frame = -2 Query: 1175 LKIKMEVENA---EKVNLEQXXXXXXXXXXXXPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1717 ++I E EN E LEQK+K KGKHDKPKPWD+DPNID WKIEKFDPSWN G+LEVSSFST+FP+YREKYLQEAWP VKSALKE+G+A ELNLVEGSMTVSTTRKTRDPY+IIKARDLIKLLSRS+PAPQAIKILDDEMQCDIIKI +VRNKERFVKRRQ LVGPNSSTLK +++LT Sbjct: 1 MEIHSEEENGVANESQALEQKEKRKGKHDKPKPWDDDPNIDHWKIEKFDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSALKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSLPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA--LEILT 182 HSP 2 Score: 178.718 bits (452), Expect = 1.450e-117 Identity = 155/217 (71.43%), Postives = 183/217 (84.33%), Query Frame = -1 Query: 441 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRKSKHT 1091 ++ALEILT CYILVQGNTVAAMGSFKGLKQVRRIVE+C+ NKMHPVY+IK+LMMKKELEKDPAL ENWDRFLP FKKKNV+ KKV +K+KKPYTPFPPPQQPSKID +LE+GEYFLS K+K AK W+EKQEKQA+KTAENKRKRE AF+PPKEP +KSE+ +VA +A S K+K K+FGK+KS +NINAE YI ++EQ S +K K + + Sbjct: 175 LKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VDKSEDANSNVADMAMSLKKKTKKFGKRKSEENINAETYIIG-SSEQASGKKSKKQRS 389
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: A0A0B2RZN5_GLYSO (KRR1 small subunit processome component OS=Glycine soja GN=glysoja_004115 PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 1.450e-117 Identity = 147/184 (79.89%), Postives = 162/184 (88.04%), Query Frame = -2 Query: 1175 LKIKMEVENA---EKVNLEQXXXXXXXXXXXXPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1717 ++I E EN E LEQK+K KGKHDKPKPWD+DPNID WKIEKFDPSWN G+LEVSSFST+FP+YREKYLQEAWP VKSALKE+G+A ELNLVEGSMTVSTTRKTRDPY+IIKARDLIKLLSRS+PAPQAIKILDDEMQCDIIKI +VRNKERFVKRRQ LVGPNSSTLK +++LT Sbjct: 1 MEIHSEEENGVANESQALEQKEKRKGKHDKPKPWDDDPNIDHWKIEKFDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSALKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSRSLPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA--LEILT 182 HSP 2 Score: 178.718 bits (452), Expect = 1.450e-117 Identity = 155/217 (71.43%), Postives = 183/217 (84.33%), Query Frame = -1 Query: 441 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKRKSKHT 1091 ++ALEILT CYILVQGNTVAAMGSFKGLKQVRRIVE+C+ NKMHPVY+IK+LMMKKELEKDPAL ENWDRFLP FKKKNV+ KKV +K+KKPYTPFPPPQQPSKID +LE+GEYFLS K+K AK W+EKQEKQA+KTAENKRKRE AF+PPKEP +KSE+ +VA +A S K+K K+FGK+KS +NINAE YI ++EQ S +K K + + Sbjct: 175 LKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANL-VDKSEDANSNVADMAMSLKKKTKKFGKRKSEENINAETYIIG-SSEQASGKKSKKQRS 389
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: A0A0A0K7G6_CUCSA (KRR1 small subunit processome component OS=Cucumis sativus GN=Csa_7G237820 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 3.066e-117 Identity = 126/151 (83.44%), Postives = 139/151 (92.05%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WDEDPNIDRWK+EKFDPSWN G+LEVSSFST+FP YREKYL++ WP VKSALKE+GI ELNL+EGSMTVSTTRKTRDPY+I+KARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVR KERFVKRR+ LVGPNSSTLK +++LT Sbjct: 24 WDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKA--LEILT 172 HSP 2 Score: 186.808 bits (473), Expect = 3.066e-117 Identity = 152/212 (71.70%), Postives = 182/212 (85.85%), Query Frame = -1 Query: 456 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISAPAAEQPSKRKR 1091 ++ALEILT CYILVQGNTVAAMGSFKGLKQVRR+VE+C+ NKMHPVY+IKILMM+KEL DPAL NENWDRFLP FKKK V+ KKVKSK KK YTPFPPPQQPS+ID +LE+GEYFL+EKKK AKKW++KQEKQA+KTA+NKRKREAAFVPPKE KQD+ K + + D+A +AKS K+KAK FGK+K+ + IN E YI A ++++P +KR Sbjct: 165 LKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAAFVPPKEAPKQDT-KPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAYI-ASSSDRPLFKKR 374
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: Q8LBT7_ARATH (KRR1 small subunit processome component OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 4.383e-117 Identity = 125/151 (82.78%), Postives = 142/151 (94.04%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD+DPNIDRW IEKFDP+WNP G+ E S+FST+FP+YREKYLQE WP+V+SALKEYG+A +LNLVEGSMTVSTTRKTRDPY+I+KARDLIKLLSRSVPAPQAIKIL+DE+QCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLK +++LT Sbjct: 30 WDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKA--LEILT 178 HSP 2 Score: 181.415 bits (459), Expect = 4.383e-117 Identity = 137/205 (66.83%), Postives = 170/205 (82.93%), Query Frame = -1 Query: 486 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDS--NKSENKEEDVXX-XXXXXXXXXKEFGKQKSLQNINAEEYISAP 1091 ++ALEILT+CYILVQG+TVAAMG FKGLKQ+RRIVEDCV+N MHPVYHIK LMMKKELEKDPAL NE+WDRFLPTF+KKNV+ KK KSKEKKPYTPFPPPQ PSKID +LESGEYF+ +KKK KKW+EKQEKQ++K+ ENKRKR+A+F+PP+EP+ +S NKSE+ + D+ + + ++K+ + +NAEEYI+ P Sbjct: 171 LKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMRDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAGP 375
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: K4B7X7_SOLLC (KRR1 small subunit processome component OS=Solanum lycopersicum GN=Solyc02g069950.2 PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 2.093e-116 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD D +ID WKIEKFDPSWN GLLEVSSFST+FP+YREKYLQE WP VK ALKE+GIA ELNLVEGSMTVSTT KTRDPY+I+KARDLIKLLSRSVPAPQA+KIL+DEMQCDIIKIGN+VRNKERFVKRRQ LVGPNSSTLK +++LT Sbjct: 29 WD-DESIDHWKIEKFDPSWNQSGLLEVSSFSTLFPQYREKYLQECWPTVKGALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLIKLLSRSVPAPQAVKILNDEMQCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKA--LEILT 176 HSP 2 Score: 189.504 bits (480), Expect = 2.093e-116 Identity = 146/201 (72.64%), Postives = 175/201 (87.06%), Query Frame = -1 Query: 489 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISA 1091 ++ALEILT CYILVQGNTVAAMGSFKGLKQ RR++EDC+ NKMHP++HIKILM+K+EL K+PAL +ENWDRFLP FKKKNV+ KKV+SKEKKPYTPFPPPQ PSKIDQ+LESGEYFLS+KKK+AK+WEEKQ KQA+K AENK+KRE AFVPP+EP + + S ++DV A+A S K+KAKEF KQKS+ INAEE+I+ Sbjct: 169 LKALEILTGCYILVQGNTVAAMGSFKGLKQARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENWDRFLPQFKKKNVKQKKVQSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDKDDVTAMASSLKRKAKEFRKQKSIDKINAEEFIAG 369
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Match: M1BWL0_SOLTU (KRR1 small subunit processome component OS=Solanum tuberosum GN=PGSC0003DMG400021187 PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 2.128e-116 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = -2 Query: 1175 WDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREKYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYVIIKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKVCMIDVLT 1627 WD D +ID WKIEKFDPSWN GLLEVSSFST+FP+YREKYLQE WP VK ALKE+GIA ELNLVEGSMTVSTT KTRDPY+I+KARDLIKLLSRSVPAPQA+KIL+DEMQCDIIKIGN+VRNKERFVKRRQ LVGPNSSTLK +++LT Sbjct: 29 WD-DESIDHWKIEKFDPSWNQSGLLEVSSFSTLFPQYREKYLQECWPNVKGALKEHGIACELNLVEGSMTVSTTMKTRDPYIIVKARDLIKLLSRSVPAPQAVKILNDEMQCDIIKIGNMVRNKERFVKRRQYLVGPNSSTLKA--LEILT 176 HSP 2 Score: 189.119 bits (479), Expect = 2.128e-116 Identity = 146/201 (72.64%), Postives = 175/201 (87.06%), Query Frame = -1 Query: 489 MQALEILTSCYILVQGNTVAAMGSFKGLKQVRRIVEDCVENKMHPVYHIKILMMKKELEKDPALKNENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDQELESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXKRKREAAFVPPKEPVKQDSNKSENKEEDVXXXXXXXXXXXKEFGKQKSLQNINAEEYISA 1091 ++ALEILT CYILVQGNTVAAMGSFKGLKQ RR++EDC+ NKMHP++HIKILM+K+EL K+PAL +ENWDRFLP FKKKNV+ KKV+SKEKKPYTPFPPPQ PSKIDQ+LESGEYFLS+KKK+AK+WEEKQ KQA+K AENK+KRE AFVPP+EP + + S E+DV A+A S K+KAKEF KQKS+ I+AEE+I+ Sbjct: 169 LKALEILTGCYILVQGNTVAAMGSFKGLKQARRVIEDCILNKMHPLHHIKILMLKRELAKNPALASENWDRFLPQFKKKNVKQKKVQSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSDKKKMAKQWEEKQVKQAEKVAENKKKREEAFVPPEEPKTHNQDVSNVDEDDVTAMASSLKRKAKEFRKQKSIDKIDAEEFIAG 369 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 20
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BLAST of g.barbadense_cottongen_reftransV1_0094852 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094852 ID=g.barbadense_cottongen_reftransV1_0094852; Name=g.barbadense_cottongen_reftransV1_0094852; organism=Gossypium barbadense; type=contig; length=1955bpback to top |