g.barbadense_cottongen_reftransV1_0094850, g.barbadense_cottongen_reftransV1_0094850 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.659e-26 Identity = 79/285 (27.72%), Postives = 128/285 (44.91%), Query Frame = -3 Query: 665 FIGVYDGHGGPEASSFINNNLF-------------------------CNFKSFVSENQEMSTNVLR--------KAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1420 F +YDG G +A+ F+ L+ S +S ST++ R +A E FL +V ++ +P + SVGSC L ++ LY+ N GDSR VL + G K++ A+QL+ +H + L S H +DP+IV+ ++KG ++V+ R++G YLKK + N + L+ R+ P +S EPS+ VHK+ D F+I ASDGL++ SN++A+ +V + Sbjct: 175 FCAIYDGFNGRDAADFLACTLYESIVFHLQLLDRQMKQTKSDDDGEKLELLSNISNVDYSSTDLFRQGVLDCLNRALFQAETDFLRMVEQEMEERPDLVSVGSCVLVTLLVGKDLYVLNLGDSRAVLA-TYNGNKKLQAVQLTEDHTVDNEVEEARLLSEHLDDPKIVIG----GKIKGKLKVT----------------------------RALGVGYLKKEKLN-DALMGILRVRNLLSPPYVSVEPSMRVHKITESDHFVIVASDGLFDFFSNEEAIGLVHS 425 HSP 2 Score: 33.113 bits (74), Expect = 1.659e-26 Identity = 15/45 (33.33%), Postives = 27/45 (60.00%), Query Frame = -2 Query: 435 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFL 569 AK L++ + +AA + +L + G RR +HDD+T++V+ L Sbjct: 436 AKFLLERLVAKAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITL 480
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C26_ORYSJ (Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.394e-24 Identity = 66/239 (27.62%), Postives = 107/239 (44.77%), Query Frame = -3 Query: 680 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGR------------SVR---------------GAKEVIAM---QLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAV 1306 L +A +TE +L + + P++A G+C L ++ + +Y+ N GDSR ++ + ++R G +I + QLST+H+ S + ++ HP+D Q +V RVKG ++V+ R+ G YLK+A+ N LL FR P +S PSL HKL DQFL+ +SDGL+++LSN++ V Sbjct: 319 ALTRALASTEAAYLDMTDQSMGTHPELAVTGACLLVALVRDDNVYVMNLGDSRAIVAQRPDDGDDGCVFGTMRRMEDVGVGLEIETRPGGCAIIGLKPLQLSTDHSTSIEEEVHRIKREHPDDDQCIVND----RVKGRLKVT----------------------------RAFGAGYLKQAKLNNG-LLEMFRNDYIGDTPYISCTPSLCHHKLTARDQFLVLSSDGLYQYLSNEEVV 524 HSP 2 Score: 43.1282 bits (100), Expect = 5.394e-24 Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = -2 Query: 402 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCY 569 A+ L++ L AA+K M + +L I +G RR +HDD+TV+V+ L+ + S Y Sbjct: 540 AQSLIEELLSRAAKKAGMDFYELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGTY 595
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.001e-24 Identity = 84/275 (30.55%), Postives = 123/275 (44.73%), Query Frame = -3 Query: 614 PYGTFIGVYDGHGGPEASSFINNNLFCNFKSFV--SENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVSLPWQNG*TQKK 1432 P GVYDGHGGP A+ F NL N + N+ +++ +LAT+ +FL K + GSCC+T +I +G L +ANAGD R VL SV G A L+++H S D R+ + S V + VWR++G + VS R IGDA+LK+ + +EP + + +++P +FLI ASDGLW+ +SNQ+AV I + P+ G QK+ Sbjct: 149 PKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFL---------KEKNVKGGSCCVTALISDGNLVVANAGDCRAVL--SVGG----FAEALTSDHRPSRDDERNRIES----SGGYVDTFNSVWRIQGSLAVS----------------------------RGIGDAHLKQ---------------------WIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIAR--------PFCKGTDQKR 347
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C35_ORYSJ (Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.912e-23 Identity = 73/249 (29.32%), Postives = 115/249 (46.18%), Query Frame = -3 Query: 668 LFCNFKSFVSENQEMST-NVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVI-----------------AMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQ 1360 L CN SEN ++ L +A TE+ +L + K P++A +GSC L ++ +YI N GDSR VL E I A+QL+++H+ S + +R+ HP+DP + RVKG ++V+ R+ G +LK+ ++N + LL FR+ P +S PSL HKL D+FLI +SDGL+++ +N++AV V+ Sbjct: 364 LRCN-----SENDHVAVLKALTRALHRTEEAYLDIADKMVGEFPELALMGSCVLAMLMKGEDMYIMNVGDSRAVLATMDSVDLEQISQGSFDGSVGDCPPCLSAVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKD----RVKGSLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVE 574 HSP 2 Score: 40.0466 bits (92), Expect = 3.912e-23 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ LV+ L AA K M + +L +I G RR +HDD++VIV+ L+ Sbjct: 586 AQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLE 631
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C66_ARATH (Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.261e-22 Identity = 68/244 (27.87%), Postives = 108/244 (44.26%), Query Frame = -3 Query: 665 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRS----------------------------VRGA--KEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1306 L +A TED +L L + P++A +GSC L ++ +Y+ N GDSR VLGR + GA ++ +QL+ EH+ + ++ HP+D V RVKG ++V+ R+ G +LK+ ++N + LL FR+ P ++ PSL HKL D+FLI +SDGL+E+ SNQ+A+ V++ Sbjct: 400 ALLQALRKTEDAYLELADQMVKENPELALMGSCVLVTLMKGEDVYVMNVGDSRAVLGRKPNLATGRKRQKELERIREDSSLEDKEILMNGAMRNTLVPLQLNMEHSTRIEEEVRRIKKEHPDDDCAVEND----RVKGYLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYIGTSPYITCSPSLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVES 610 HSP 2 Score: 39.2762 bits (90), Expect = 3.261e-22 Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ L++ L AA K M + +L +I +G RR +HDD++VIV+ L+ Sbjct: 621 AQHLIQEVLLRAANKFGMDFHELLEIPQGDRRRYHDDVSVIVISLE 666
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: R0G5U7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013921mg PE=3 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 2.996e-135 Identity = 212/332 (63.86%), Postives = 253/332 (76.20%), Query Frame = -3 Query: 653 LKMVKSCWK-PSIEG------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 L+MV CW+ PS++G D+ G DGLLWYKD G HV GDFSM+V+QAN+LLED S+LESG +S SGP TF+GVYDGHGGPEA+ F+N +LF N + F SEN MS +V+ KAFLATE+ FLSLVR+QW +KPQ+ASVG+CCL G+IC+GLLYIANAGDSRVVLGR + K V A+QLS+EHNAS ++VR+ELRSLHP+DPQIVV+KHKVWRVKG+IQVS RSIGDAYLKKAEFN+EPLL KFR+ E F KPIL AEP++ VHK+HP+DQFLIFASDGLWEHL+NQ+AV IV T PRN Sbjct: 8 LRMVVPCWRRPSVKGEHSTKNDANGRCDGLLWYKDSGNHVAGDFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIRKFTSENHGMSASVITKAFLATEEDFLSLVRRQWQIKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPDDPQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPTVTVHKIHPEDQFLIFASDGLWEHLTNQEAVDIVNTYPRN 311 HSP 2 Score: 106.686 bits (265), Expect = 2.996e-135 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -2 Query: 363 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLA 578 GIAK+L+KTAL+EAA+KREMRYSDL KIDRGVRRHFHDDITVIVVFLD +L++ S+ +SI GGG LA Sbjct: 311 NGIAKKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRSASRRPLLSISGGGDLA 382
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: U5FKV8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s08370g PE=3 SV=1) HSP 1 Score: 415.231 bits (1066), Expect = 3.282e-135 Identity = 218/322 (67.70%), Postives = 252/322 (78.26%), Query Frame = -3 Query: 656 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1621 MVK CW+P +E D+ +DGLLWYK++G HVYG+FSMAV+QANSL+EDQSQLESG LSS++SGP GTF+GVYDGHGG EAS FIN+N+F NFK VSE Q++S ++KAF +TE+ FLSLV+KQWL KP MASVGSCCL GVICNGLLYIANAGDSRVVLGR+ RG +EV A+QLSTEHNA+ + VR+ELR LHPND QIVV KHKVWRVKG+IQVS RSIGDAYLKK+EFN+EPL PKFRL EPF KPIL+ EP +LV KL P D+FLIFASDGLWEHLSNQ+AV IVQ PR Sbjct: 1 MVKPCWRPCVEDDATEKVDGLLWYKNLGNHVYGEFSMAVIQANSLMEDQSQLESGPLSSTNSGPQGTFVGVYDGHGGTEASKFINHNVFSNFKKIVSEQQDVSEITIKKAFASTEEGFLSLVKKQWLSKPHMASVGSCCLVGVICNGLLYIANAGDSRVVLGRAERGTREVTALQLSTEHNANIETVRNELRCLHPNDSQIVVQKHKVWRVKGIIQVS----------------------------RSIGDAYLKKSEFNREPLQPKFRLPEPFHKPILNPEPEILVRKLQPGDRFLIFASDGLWEHLSNQEAVDIVQNFPR 294 HSP 2 Score: 82.0333 bits (201), Expect = 2.216e-13 Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = -2 Query: 375 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 578 +GIAK LVK AL++AA+KREMRY+DL +I+RGVRRHFHDDI+VIVV++D HLI+ SS P+SI+GG Sbjct: 295 KGIAKMLVKAALRKAAKKREMRYTDLKRIERGVRRHFHDDISVIVVYIDSHLISRSSIGGHPLSIRGG 362
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: W1NJK0_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00023p00195110 PE=3 SV=1) HSP 1 Score: 406.757 bits (1044), Expect = 6.441e-135 Identity = 216/337 (64.09%), Postives = 251/337 (74.48%), Query Frame = -3 Query: 647 LKMVKSCWKPSI----------EGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVS 1627 +KMV SCWKP++ +G S G L+GLLWYKD+GQHV G+FSMAVVQANSLLEDQSQ+ESG LS S GP+GTF+GVYDGHGGPE S FIN+NLF N K F SE Q MSTNV+ KAFLATE+ FLSLV+KQWL KPQ+A+VGSCCL G++C G LYIAN GDSR VL RS++ +EV A+QLS+EHNAS ++VR ELRSLHP+D +IVV+KHKVWRVKGLIQVS RSIGD YLKKAEFN+EPL PKFRL EP R+PILSAEPS+ H + DQF+IFASDGLWEHLSNQ+AV IV R+ S Sbjct: 1 MKMVGSCWKPAVVERFVRNSNVDGAS-GRLEGLLWYKDLGQHVNGEFSMAVVQANSLLEDQSQVESGPLSLSELGPHGTFVGVYDGHGGPETSRFINDNLFQNLKKFTSEQQAMSTNVIHKAFLATEEAFLSLVKKQWLTKPQLAAVGSCCLVGIVCGGTLYIANLGDSRAVLARSIKATREVAAIQLSSEHNASIESVRQELRSLHPDDSRIVVLKHKVWRVKGLIQVS----------------------------RSIGDVYLKKAEFNREPLYPKFRLSEPIRRPILSAEPSITTHTISALDQFVIFASDGLWEHLSNQEAVDIVHNHSRSGS 308 HSP 2 Score: 104.375 bits (259), Expect = 6.441e-135 Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 G A+RLVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLDP+L++ SS S++GGG Sbjct: 307 GSARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDPYLVSQSSIRGPKSSLRGGG 374
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A059BI40_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02783 PE=3 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.212e-134 Identity = 217/333 (65.17%), Postives = 258/333 (77.48%), Query Frame = -3 Query: 650 LKMVKSCWKPSIEGD-------SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNV 1627 +++V CWKPS+EGD + G +DGLLWYKD G V G+FSMAV+QAN+LLEDQSQ+ESG +SS SGP GTF+GVYDGHGGPEAS F+N+ LF K + SENQ MS +V++KAFLATE++FLS+V+KQW +KPQ+ASVGSCCL G++C G LYIANAGDSRVVLGR + KEV A+QLS EHNASF++VR+ELR LHP+DPQIVV+KHKVWRVKG+IQVS RSIGDAYLKKAEFNKEPLL KFRL EPF +PIL AEPS+LV +++P+DQFLIFASDGLWEHLSNQ+AV IVQ PRNV Sbjct: 7 MRIVSPCWKPSVEGDDSGKSGDASGRVDGLLWYKDSGHLVNGEFSMAVIQANTLLEDQSQVESGPMSSLESGPQGTFVGVYDGHGGPEASRFVNDRLFDYVKKYTSENQGMSADVIKKAFLATEEEFLSMVKKQWPIKPQIASVGSCCLVGIVCGGQLYIANAGDSRVVLGRMEKTVKEVKAIQLSYEHNASFESVREELRLLHPDDPQIVVLKHKVWRVKGVIQVS----------------------------RSIGDAYLKKAEFNKEPLLAKFRLPEPFHRPILKAEPSVLVQQIYPEDQFLIFASDGLWEHLSNQEAVDIVQNCPRNV 311
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A068U770_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_12 OS=Coffea canephora GN=GSCOC_T00017697001 PE=3 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 1.543e-134 Identity = 211/333 (63.36%), Postives = 257/333 (77.18%), Query Frame = -3 Query: 653 KMVKSCWKPSIEGDSR--------GC-LDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1624 ++V CW+PS+E + + GC +DGL WYKD G+HV+G+FSMA++QAN++LED SQLESG LS SGP GTF+G+YDGH GPEAS FI+++LF N K + SENQ MS +V+ KA+LATE+ FLS+V KQWL++PQMASVGSCCL G+IC+G+LYIANAGDSRVVLGR + +KEV A+QLSTEHNAS +VRDEL+S HP+DPQIVV++HKVWRVKGLIQVS RSIGDAYLKK EFN+EPLLPKFRL EPF+KPIL AEPS+ V KL+P+DQFL+FASDGLWEHLS+Q+AV IV T PRN Sbjct: 8 RIVSPCWRPSVENEGQNSGRGGDLGCRVDGLWWYKDSGRHVHGEFSMAIIQANNVLEDYSQLESGPLSLEESGPQGTFVGIYDGHAGPEASQFISDHLFDNIKKYTSENQGMSADVISKAYLATEEAFLSMVEKQWLIRPQMASVGSCCLVGIICSGVLYIANAGDSRVVLGRMDKSSKEVKAVQLSTEHNASLPSVRDELQSSHPDDPQIVVLRHKVWRVKGLIQVS----------------------------RSIGDAYLKKTEFNREPLLPKFRLPEPFQKPILKAEPSIFVQKLYPEDQFLVFASDGLWEHLSSQEAVDIVNTCPRN 312 HSP 2 Score: 99.7525 bits (247), Expect = 1.543e-134 Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 GIA++L+K AL EAA+KREMRYSDL KIDRGVRRHFHDDITVIVV+LD LI+ SS S +S++GGG Sbjct: 313 GIARKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDFPLISRSSLRESVVSVRGGG 380 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094850 ID=g.barbadense_cottongen_reftransV1_0094850; Name=g.barbadense_cottongen_reftransV1_0094850; organism=Gossypium barbadense; type=contig; length=2139bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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