g.barbadense_cottongen_reftransV1_0094850, g.barbadense_cottongen_reftransV1_0094850 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.659e-26 Identity = 79/285 (27.72%), Postives = 128/285 (44.91%), Query Frame = -3 Query: 665 FIGVYDGHGGPEASSFINNNLF-------------------------CNFKSFVSENQEMSTNVLR--------KAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1420 F +YDG G +A+ F+ L+ S +S ST++ R +A E FL +V ++ +P + SVGSC L ++ LY+ N GDSR VL + G K++ A+QL+ +H + L S H +DP+IV+ ++KG ++V+ R++G YLKK + N + L+ R+ P +S EPS+ VHK+ D F+I ASDGL++ SN++A+ +V + Sbjct: 175 FCAIYDGFNGRDAADFLACTLYESIVFHLQLLDRQMKQTKSDDDGEKLELLSNISNVDYSSTDLFRQGVLDCLNRALFQAETDFLRMVEQEMEERPDLVSVGSCVLVTLLVGKDLYVLNLGDSRAVLA-TYNGNKKLQAVQLTEDHTVDNEVEEARLLSEHLDDPKIVIG----GKIKGKLKVT----------------------------RALGVGYLKKEKLN-DALMGILRVRNLLSPPYVSVEPSMRVHKITESDHFVIVASDGLFDFFSNEEAIGLVHS 425 HSP 2 Score: 33.113 bits (74), Expect = 1.659e-26 Identity = 15/45 (33.33%), Postives = 27/45 (60.00%), Query Frame = -2 Query: 435 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFL 569 AK L++ + +AA + +L + G RR +HDD+T++V+ L Sbjct: 436 AKFLLERLVAKAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITL 480
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C26_ORYSJ (Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.394e-24 Identity = 66/239 (27.62%), Postives = 107/239 (44.77%), Query Frame = -3 Query: 680 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGR------------SVR---------------GAKEVIAM---QLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAV 1306 L +A +TE +L + + P++A G+C L ++ + +Y+ N GDSR ++ + ++R G +I + QLST+H+ S + ++ HP+D Q +V RVKG ++V+ R+ G YLK+A+ N LL FR P +S PSL HKL DQFL+ +SDGL+++LSN++ V Sbjct: 319 ALTRALASTEAAYLDMTDQSMGTHPELAVTGACLLVALVRDDNVYVMNLGDSRAIVAQRPDDGDDGCVFGTMRRMEDVGVGLEIETRPGGCAIIGLKPLQLSTDHSTSIEEEVHRIKREHPDDDQCIVND----RVKGRLKVT----------------------------RAFGAGYLKQAKLNNG-LLEMFRNDYIGDTPYISCTPSLCHHKLTARDQFLVLSSDGLYQYLSNEEVV 524 HSP 2 Score: 43.1282 bits (100), Expect = 5.394e-24 Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = -2 Query: 402 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCY 569 A+ L++ L AA+K M + +L I +G RR +HDD+TV+V+ L+ + S Y Sbjct: 540 AQSLIEELLSRAAKKAGMDFYELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGTY 595
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.001e-24 Identity = 84/275 (30.55%), Postives = 123/275 (44.73%), Query Frame = -3 Query: 614 PYGTFIGVYDGHGGPEASSFINNNLFCNFKSFV--SENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVSLPWQNG*TQKK 1432 P GVYDGHGGP A+ F NL N + N+ +++ +LAT+ +FL K + GSCC+T +I +G L +ANAGD R VL SV G A L+++H S D R+ + S V + VWR++G + VS R IGDA+LK+ + +EP + + +++P +FLI ASDGLW+ +SNQ+AV I + P+ G QK+ Sbjct: 149 PKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFL---------KEKNVKGGSCCVTALISDGNLVVANAGDCRAVL--SVGG----FAEALTSDHRPSRDDERNRIES----SGGYVDTFNSVWRIQGSLAVS----------------------------RGIGDAHLKQ---------------------WIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIAR--------PFCKGTDQKR 347
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C35_ORYSJ (Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.912e-23 Identity = 73/249 (29.32%), Postives = 115/249 (46.18%), Query Frame = -3 Query: 668 LFCNFKSFVSENQEMST-NVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVI-----------------AMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQ 1360 L CN SEN ++ L +A TE+ +L + K P++A +GSC L ++ +YI N GDSR VL E I A+QL+++H+ S + +R+ HP+DP + RVKG ++V+ R+ G +LK+ ++N + LL FR+ P +S PSL HKL D+FLI +SDGL+++ +N++AV V+ Sbjct: 364 LRCN-----SENDHVAVLKALTRALHRTEEAYLDIADKMVGEFPELALMGSCVLAMLMKGEDMYIMNVGDSRAVLATMDSVDLEQISQGSFDGSVGDCPPCLSAVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKD----RVKGSLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVE 574 HSP 2 Score: 40.0466 bits (92), Expect = 3.912e-23 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ LV+ L AA K M + +L +I G RR +HDD++VIV+ L+ Sbjct: 586 AQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLE 631
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C66_ARATH (Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.261e-22 Identity = 68/244 (27.87%), Postives = 108/244 (44.26%), Query Frame = -3 Query: 665 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRS----------------------------VRGA--KEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1306 L +A TED +L L + P++A +GSC L ++ +Y+ N GDSR VLGR + GA ++ +QL+ EH+ + ++ HP+D V RVKG ++V+ R+ G +LK+ ++N + LL FR+ P ++ PSL HKL D+FLI +SDGL+E+ SNQ+A+ V++ Sbjct: 400 ALLQALRKTEDAYLELADQMVKENPELALMGSCVLVTLMKGEDVYVMNVGDSRAVLGRKPNLATGRKRQKELERIREDSSLEDKEILMNGAMRNTLVPLQLNMEHSTRIEEEVRRIKKEHPDDDCAVEND----RVKGYLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYIGTSPYITCSPSLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVES 610 HSP 2 Score: 39.2762 bits (90), Expect = 3.261e-22 Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ L++ L AA K M + +L +I +G RR +HDD++VIV+ L+ Sbjct: 621 AQHLIQEVLLRAANKFGMDFHELLEIPQGDRRRYHDDVSVIVISLE 666
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: F6HC26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03500 PE=3 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 8.644e-139 Identity = 220/331 (66.47%), Postives = 258/331 (77.95%), Query Frame = -3 Query: 653 LKMVKSCWKPSIEG------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +++V CW+PSIEG D G +DGLLWYKD G+HV GDFSMAV+QAN++LED S+L+SG LSS SGP GTF+G+YDGHGGPEAS F+N+ LF N K F SENQ MS +V+ KAFLATED+FLSLV+KQWL KPQ+AS GSCCL G+IC+GLLYIANAGDSRVVLGR + EV A+QLS+EHNA+F++VR+ELR LHP+DPQIVV+KHKVWRVKG+IQVS RSIGDAYLK AEFN+EPLLPKFRL EPF KPIL AEPS+LV +LHP+DQFLIFASDGLWE+LSNQ+AV IV SPRN Sbjct: 1 MRIVAPCWRPSIEGENSGRGDVAGRVDGLLWYKDSGRHVNGDFSMAVIQANNVLEDHSRLDSGPLSSLDSGPQGTFVGIYDGHGGPEASRFVNSRLFDNLKKFTSENQGMSEDVITKAFLATEDEFLSLVKKQWLSKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRLEKAFSEVKAVQLSSEHNANFESVREELRMLHPDDPQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKNAEFNREPLLPKFRLDEPFHKPILKAEPSVLVQRLHPEDQFLIFASDGLWENLSNQEAVDIVNNSPRN 303 HSP 2 Score: 93.9745 bits (232), Expect = 2.553e-17 Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = -2 Query: 372 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 578 GIA++LVK AL+EAA+KREMRYSDL KI+RGVRRHFHDDITV+V+FLD LI+ +S +SI GG Sbjct: 303 NGIARKLVKAALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVVLFLDYSLISRNSNRGPSLSIIAGG 371
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: M5WZT8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007029mg PE=3 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 2.246e-138 Identity = 222/333 (66.67%), Postives = 258/333 (77.48%), Query Frame = -3 Query: 653 LKMVKSCWKPSIEG--------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +K+V CWKPS+EG D G LDGLLW+KD G HV GDFSMAV+QAN+LLED SQLESG LSS SGP+GTF+G+YDGHGGPEAS F+N +LF NFK F SENQ MS +V+ KAFLATE++FLSLV+KQW++KP +ASVGSCCL GV+C+GLLYIANAGDSRVVLGR + K+V A+QLS EHNAS ++VR+ELRSLHP+DPQIVV+KHKVWRVKGLIQVS RSIGDAYLK+ EFNKEPLL KFRL EPF KPIL AEP++LV KL+P+DQFLIFASDGLWE LS+Q+AV IVQ PRN Sbjct: 7 MKLVAPCWKPSVEGENSNNRGGDVSGRLDGLLWHKDSGHHVNGDFSMAVIQANNLLEDHSQLESGPLSSLESGPHGTFVGIYDGHGGPEASRFLNEHLFNNFKKFTSENQGMSADVITKAFLATEEEFLSLVKKQWIIKPLLASVGSCCLVGVVCSGLLYIANAGDSRVVLGRLEKTVKQVKAVQLSIEHNASIESVREELRSLHPDDPQIVVLKHKVWRVKGLIQVS----------------------------RSIGDAYLKRQEFNKEPLLAKFRLSEPFHKPILKAEPTILVQKLYPEDQFLIFASDGLWEQLSSQEAVDIVQNYPRN 311 HSP 2 Score: 101.679 bits (252), Expect = 2.246e-138 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 GIA++LVK AL EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLD HL++ S + +S+KG G Sbjct: 312 GIARKLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDSHLVSRSHWHGPLLSVKGSG 379
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A067K1V4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16437 PE=3 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 7.632e-138 Identity = 218/323 (67.49%), Postives = 254/323 (78.64%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CW+P ++ D+ G +DGLLWYKD+G H+YG+FSMAV+QAN+LLEDQSQLESG LS ++SGP GTFIGVYDGH G EAS FI +NLF NFK+ VSE+QE+S NV++KAF ATE+ FL+LV+KQW KPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGR RG + V A+QLS EHNA+ + VR+EL++LHP+D QIVV+KH+ WRVKG+IQVS RSIGDAYLKKAEFNKEPL K+RL EPF KPILS+EPS +V KL P D+FLIFASDGLWEHLSNQQAV IVQ PRN Sbjct: 1 MVKLCWRPRVDDDATGKVDGLLWYKDLGNHLYGEFSMAVIQANNLLEDQSQLESGPLSYANSGPQGTFIGVYDGHAGTEASRFICHNLFSNFKAIVSEHQEISENVIKKAFSATEEDFLALVKKQWHSKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRVERGNRGVTAVQLSAEHNANIEHVRNELQTLHPDDSQIVVLKHRAWRVKGIIQVS----------------------------RSIGDAYLKKAEFNKEPLQSKYRLAEPFHKPILSSEPSTIVRKLQPQDKFLIFASDGLWEHLSNQQAVEIVQNLPRN 295 HSP 2 Score: 104.76 bits (260), Expect = 7.632e-138 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 360 LLMQGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLAS 587 L GIAKRLV ALKEAA+KREMRY+DL KIDRGVRRHFHD+ITV+VV++D H+IN +S P SI+GG AS Sbjct: 292 LPRNGIAKRLVNAALKEAARKREMRYTDLKKIDRGVRRHFHDEITVVVVYIDSHMINTNSFNAYPFSIRGGIAPAS 367
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: B9SGT9_RICCO (Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_0820180 PE=3 SV=1) HSP 1 Score: 416.772 bits (1070), Expect = 8.662e-137 Identity = 217/323 (67.18%), Postives = 256/323 (79.26%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CW+P ++GD+ G +DGLLWYKD+GQH++G+FSMAV+QANSLLEDQSQLESG LSS+SS P GTFIGVYDGH G EAS FI+ NLF NFK+ VSE++++S NV++KA+ ATE+ FL LV+ QWL KPQMASVGSCCL GVICNGLLY+ANAGDSR VLGR+ RG++ V A+QLS EHNA+ + VR+ELR+LHP D QIVV+KHKVWRVKG+IQVS RSIGDAYLKK +FN EPL K+RL EPF KPILS+EPS+LVHKL P+DQFLIFASDGLWEHLSNQ+AV IVQ PRN Sbjct: 1 MVKPCWRPRVDGDTNGKVDGLLWYKDLGQHLHGEFSMAVIQANSLLEDQSQLESGPLSSTSSDPQGTFIGVYDGHAGTEASKFISRNLFPNFKAIVSEHEDVSENVIKKAYSATEEDFLCLVKTQWLNKPQMASVGSCCLVGVICNGLLYVANAGDSRAVLGRAERGSRGVTAIQLSNEHNANIEFVRNELRALHPEDSQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKKTQFNTEPLQSKYRLPEPFHKPILSSEPSVLVHKLQPEDQFLIFASDGLWEHLSNQEAVEIVQNCPRN 295 HSP 2 Score: 100.908 bits (250), Expect = 8.662e-137 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 GIA+RLVK AL EAA+KREMRY+DL KID GVRRHFHDDITV+VVF+D HLI + P SI+GGG Sbjct: 296 GIARRLVKAALMEAARKREMRYTDLQKIDPGVRRHFHDDITVVVVFIDSHLIRRRPLNSFPFSIRGGG 363
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0A0KS12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G177060 PE=3 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 1.280e-136 Identity = 216/333 (64.86%), Postives = 259/333 (77.78%), Query Frame = -3 Query: 653 YLKMVKSCWKPSIEG-------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1630 ++K+V CWKP +EG D+ G +DGLLWYKD G+H+ GDFSMAV+QAN+LLED+SQLESG LSS SGP GTF+G+YDGHGGPEA+ FIN+ LF N K F+ ENQ +S ++ KAFL TE++FLSLV+KQWL+KPQ+ASVGSCCL G+IC GLLYIANAGDSRVVLGR R KEV A+QLS+EHNAS ++VR+EL SLHPNDPQIVV+KHKVWRVKG+IQVS RS+GDAYLKK EFN+EPLLPKFRL EPF KPIL AEP+++V KL+P+DQFLIFASDGLWE++SNQ+AV IV + PRN Sbjct: 6 FMKIVSPCWKPLVEGENSSRDGDASGRVDGLLWYKDSGRHINGDFSMAVIQANNLLEDRSQLESGPLSSYESGPVGTFVGIYDGHGGPEAAQFINDRLFNNMKKFIPENQGVSAEIINKAFLETEEEFLSLVKKQWLIKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFERTHKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVS----------------------------RSLGDAYLKKTEFNREPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRN 310 HSP 2 Score: 99.7525 bits (247), Expect = 1.280e-136 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = -2 Query: 375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575 G+A++LVK AL AA+KREMRY+DL KIDRGVRRHFHDDITVIV+FLD HLI+ S Y +SI+GG Sbjct: 311 GVARKLVKAALHGAAKKREMRYTDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGG 377
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A067DXA1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017598mg PE=3 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 2.193e-136 Identity = 217/323 (67.18%), Postives = 257/323 (79.57%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CWK S E + G +DGLLWYKD+G HVYG+FSMA+VQANS++EDQ QLESG LSSS+SGP+GTF+GVYDGHGGPE + FI++NLF N K F SE+ EMS NV+RKAF ATED FLSLV+K+W KP MASVGSCCL G+IC+GLLYIAN GDSRVVLGR+ RG +EV A+Q+S EHNA+ ++VRDEL SLHP+DPQIVV+KHKVWRVKG+IQVS R+IGDAYLK+AEFN+EPL KFRL EPF +PI+SAEPS+LVHKL+P+DQFLIFASDGLWEHLSN++AV IVQ PR+ Sbjct: 1 MVKPCWKSSYEDEDSGRIDGLLWYKDLGPHVYGEFSMALVQANSIMEDQCQLESGPLSSSNSGPHGTFVGVYDGHGGPETARFISDNLFQNLKRFASEHHEMSENVIRKAFAATEDDFLSLVKKEWPSKPNMASVGSCCLVGLICSGLLYIANVGDSRVVLGRAQRGTREVSAIQVSMEHNANIESVRDELHSLHPHDPQIVVLKHKVWRVKGIIQVS----------------------------RAIGDAYLKRAEFNREPLASKFRLPEPFEEPIISAEPSILVHKLYPEDQFLIFASDGLWEHLSNEEAVDIVQNYPRH 295 HSP 2 Score: 85.5001 bits (210), Expect = 1.269e-14 Identity = 47/68 (69.12%), Postives = 59/68 (86.76%), Query Frame = -2 Query: 375 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 578 GIA+RLVK ALKEAA+KREMR+SDL KIDRGVRRHFHDD++V+V++LDP LI+ S +SP S++GG Sbjct: 295 HGIARRLVKAALKEAAKKREMRFSDLKKIDRGVRRHFHDDVSVVVIYLDPGLIDQSFNCSSPFSMRGG 362
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A059BGJ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02783 PE=3 SV=1) HSP 1 Score: 412.535 bits (1059), Expect = 3.251e-136 Identity = 216/332 (65.06%), Postives = 257/332 (77.41%), Query Frame = -3 Query: 653 LKMVKSCWKPSIEGD-------SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +++V CWKPS+EGD + G +DGLLWYKD G V G+FSMAV+QAN+LLEDQSQ+ESG +SS SGP GTF+GVYDGHGGPEAS F+N+ LF K + SENQ MS +V++KAFLATE++FLS+V+KQW +KPQ+ASVGSCCL G++C G LYIANAGDSRVVLGR + KEV A+QLS EHNASF++VR+ELR LHP+DPQIVV+KHKVWRVKG+IQVS RSIGDAYLKKAEFNKEPLL KFRL EPF +PIL AEPS+LV +++P+DQFLIFASDGLWEHLSNQ+AV IVQ PRN Sbjct: 7 MRIVSPCWKPSVEGDDSGKSGDASGRVDGLLWYKDSGHLVNGEFSMAVIQANTLLEDQSQVESGPMSSLESGPQGTFVGVYDGHGGPEASRFVNDRLFDYVKKYTSENQGMSADVIKKAFLATEEEFLSMVKKQWPIKPQIASVGSCCLVGIVCGGQLYIANAGDSRVVLGRMEKTVKEVKAIQLSYEHNASFESVREELRLLHPDDPQIVVLKHKVWRVKGVIQVS----------------------------RSIGDAYLKKAEFNKEPLLAKFRLPEPFHRPILKAEPSVLVQQIYPEDQFLIFASDGLWEHLSNQEAVDIVQNCPRN 310 HSP 2 Score: 103.219 bits (256), Expect = 3.251e-136 Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = -2 Query: 375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575 G+A++LVKTAL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLD HLI SS +S++GG Sbjct: 311 GVARKLVKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDSHLIRRSSWRGPLLSLRGG 377
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: D7L0I6_ARALL (Phosphatase 2C family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478621 PE=3 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 7.285e-136 Identity = 212/332 (63.86%), Postives = 252/332 (75.90%), Query Frame = -3 Query: 653 LKMVKSCWK-PSIEGD------SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 L+MV CW+ PS++GD + G DGLLWYKD G HV G+FSM+V+QAN+LLED S+LESG +S SGP TF+GVYDGHGGPEA+ F+N +LF N + F SEN MS NV+ KAFLATE+ FLSLVR+QW +KPQ+ASVG+CCL G+IC+GLLYIANAGDSRVVLGR + K V A+QLS+EHNAS ++VR+ELRSLHPNDPQIVV+KHKVWRVKG+IQVS RSIGDAYLKKAEFN+EPLL KFR+ E F PIL AEP++ VHK+HP+DQFLIFASDGLWEHL+NQ+AV IV T PRN Sbjct: 8 LRMVAPCWRRPSVKGDHSTRNDANGRCDGLLWYKDSGNHVAGEFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIRKFTSENHGMSANVITKAFLATEEDFLSLVRRQWQIKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKKAEFNREPLLAKFRVPEVFHTPILRAEPAITVHKIHPEDQFLIFASDGLWEHLTNQEAVDIVNTCPRN 311 HSP 2 Score: 108.227 bits (269), Expect = 7.285e-136 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -2 Query: 363 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLA 578 GIA++L+KTAL+EAA+KREMRYSDL KIDRGVRRHFHDDITVIVVFLD HL++ S+ +SI GGG LA Sbjct: 311 NGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRPLLSISGGGDLA 382
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: W9S4N3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017250 PE=3 SV=1) HSP 1 Score: 411.379 bits (1056), Expect = 1.426e-135 Identity = 215/332 (64.76%), Postives = 256/332 (77.11%), Query Frame = -3 Query: 653 LKMVKSCWKPSIE-------GDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +K+V SC+KPS+E GD+ +DGLLWYKD G+HV GDFSMAVVQAN+LLEDQSQLESG + S SGP GTF+G+YDGHGGPEA+ F+N++LF N K F SENQ MS +V+ KAFLATE++FLSLV+KQWL KP +ASVG+CCL G+IC+GLLYIANAGDSR VLGR + K+V A+QLS EHNAS+++VR+EL LHP+DPQIVV+KH VWRVKGLIQVS RSIGDAYLK+ EFN+EPLLPKFRL EPF KPIL AEP++LV KL P+D+FLIFASDGLWEHL+NQQAV IV + PRN Sbjct: 7 MKIVSSCFKPSVEEENSSRGGDANDRVDGLLWYKDSGRHVGGDFSMAVVQANNLLEDQSQLESGPMGSIESGPRGTFVGIYDGHGGPEAARFVNDHLFKNIKKFTSENQAMSADVINKAFLATEEEFLSLVKKQWLTKPLLASVGACCLVGIICSGLLYIANAGDSRAVLGRLEKAVKQVKAVQLSVEHNASYESVREELHLLHPDDPQIVVLKHNVWRVKGLIQVS----------------------------RSIGDAYLKRVEFNREPLLPKFRLPEPFHKPILRAEPTILVQKLFPEDKFLIFASDGLWEHLTNQQAVDIVHSCPRN 310 HSP 2 Score: 102.064 bits (253), Expect = 1.426e-135 Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = -2 Query: 375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575 GIA++LVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLD HLI+ S +SIKGG Sbjct: 311 GIARKLVKVALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDSHLISRSFWRGPYISIKGG 377
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A022RPE3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008235mg PE=3 SV=1) HSP 1 Score: 412.535 bits (1059), Expect = 1.528e-135 Identity = 216/337 (64.09%), Postives = 258/337 (76.56%), Query Frame = -3 Query: 653 MVKSCWKPSIEGD--------SR------GCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CWKPS+EGD SR G +DGLLWYKD+G H+ G+FSMAV+QANSL+EDQSQ+ESG LSS +GP GTF+G+YDGHGGPE S F+N +LF N K F SENQE+S NV++KAFLATE++FLSLVR+QW VKP +ASVG+CCL G+ICNG+LYIANAGDSRVVLGR+ + + V +QLSTEHNA+ + +RDELRSLHP+D QIVV+KHKVWRVKG+IQVS RSIGDAYLK++EFN+EPLL KFR+ EPF KPILSAEPS+LVHKL +DQFL+FASDGLWEHLSNQ+AV IV + PR Sbjct: 1 MVKPCWKPSVEGDGNRRRENGSRKGGDLIGRVDGLLWYKDIGNHIDGEFSMAVIQANSLMEDQSQIESGPLSSLDAGPCGTFVGIYDGHGGPETSRFVNQSLFTNLKKFASENQEISANVIKKAFLATEEEFLSLVRQQWSVKPLLASVGTCCLVGLICNGILYIANAGDSRVVLGRANKTVRGVTPVQLSTEHNANLEPIRDELRSLHPDDSQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKRSEFNREPLLAKFRVAEPFHKPILSAEPSILVHKLQAEDQFLVFASDGLWEHLSNQEAVDIVNSYPRQ 309 HSP 2 Score: 100.523 bits (249), Expect = 1.528e-135 Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = -2 Query: 372 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 578 QGIA+RLVK L+ AA+KREMRY+DL KIDRGVRRHFHDDITV+VVF+D LI +S +S +SI+GGG Sbjct: 309 QGIARRLVKAGLRVAAKKREMRYTDLKKIDRGVRRHFHDDITVVVVFIDQCLIKTASSRSSTVSIRGGG 377 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094850 ID=g.barbadense_cottongen_reftransV1_0094850; Name=g.barbadense_cottongen_reftransV1_0094850; organism=Gossypium barbadense; type=contig; length=2139bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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