g.barbadense_cottongen_reftransV1_0094850, g.barbadense_cottongen_reftransV1_0094850 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.659e-26 Identity = 79/285 (27.72%), Postives = 128/285 (44.91%), Query Frame = -3 Query: 665 FIGVYDGHGGPEASSFINNNLF-------------------------CNFKSFVSENQEMSTNVLR--------KAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1420 F +YDG G +A+ F+ L+ S +S ST++ R +A E FL +V ++ +P + SVGSC L ++ LY+ N GDSR VL + G K++ A+QL+ +H + L S H +DP+IV+ ++KG ++V+ R++G YLKK + N + L+ R+ P +S EPS+ VHK+ D F+I ASDGL++ SN++A+ +V + Sbjct: 175 FCAIYDGFNGRDAADFLACTLYESIVFHLQLLDRQMKQTKSDDDGEKLELLSNISNVDYSSTDLFRQGVLDCLNRALFQAETDFLRMVEQEMEERPDLVSVGSCVLVTLLVGKDLYVLNLGDSRAVLA-TYNGNKKLQAVQLTEDHTVDNEVEEARLLSEHLDDPKIVIG----GKIKGKLKVT----------------------------RALGVGYLKKEKLN-DALMGILRVRNLLSPPYVSVEPSMRVHKITESDHFVIVASDGLFDFFSNEEAIGLVHS 425 HSP 2 Score: 33.113 bits (74), Expect = 1.659e-26 Identity = 15/45 (33.33%), Postives = 27/45 (60.00%), Query Frame = -2 Query: 435 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFL 569 AK L++ + +AA + +L + G RR +HDD+T++V+ L Sbjct: 436 AKFLLERLVAKAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITL 480
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C26_ORYSJ (Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.394e-24 Identity = 66/239 (27.62%), Postives = 107/239 (44.77%), Query Frame = -3 Query: 680 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGR------------SVR---------------GAKEVIAM---QLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAV 1306 L +A +TE +L + + P++A G+C L ++ + +Y+ N GDSR ++ + ++R G +I + QLST+H+ S + ++ HP+D Q +V RVKG ++V+ R+ G YLK+A+ N LL FR P +S PSL HKL DQFL+ +SDGL+++LSN++ V Sbjct: 319 ALTRALASTEAAYLDMTDQSMGTHPELAVTGACLLVALVRDDNVYVMNLGDSRAIVAQRPDDGDDGCVFGTMRRMEDVGVGLEIETRPGGCAIIGLKPLQLSTDHSTSIEEEVHRIKREHPDDDQCIVND----RVKGRLKVT----------------------------RAFGAGYLKQAKLNNG-LLEMFRNDYIGDTPYISCTPSLCHHKLTARDQFLVLSSDGLYQYLSNEEVV 524 HSP 2 Score: 43.1282 bits (100), Expect = 5.394e-24 Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = -2 Query: 402 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCY 569 A+ L++ L AA+K M + +L I +G RR +HDD+TV+V+ L+ + S Y Sbjct: 540 AQSLIEELLSRAAKKAGMDFYELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGTY 595
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.001e-24 Identity = 84/275 (30.55%), Postives = 123/275 (44.73%), Query Frame = -3 Query: 614 PYGTFIGVYDGHGGPEASSFINNNLFCNFKSFV--SENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVSLPWQNG*TQKK 1432 P GVYDGHGGP A+ F NL N + N+ +++ +LAT+ +FL K + GSCC+T +I +G L +ANAGD R VL SV G A L+++H S D R+ + S V + VWR++G + VS R IGDA+LK+ + +EP + + +++P +FLI ASDGLW+ +SNQ+AV I + P+ G QK+ Sbjct: 149 PKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFL---------KEKNVKGGSCCVTALISDGNLVVANAGDCRAVL--SVGG----FAEALTSDHRPSRDDERNRIES----SGGYVDTFNSVWRIQGSLAVS----------------------------RGIGDAHLKQ---------------------WIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIAR--------PFCKGTDQKR 347
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C35_ORYSJ (Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.912e-23 Identity = 73/249 (29.32%), Postives = 115/249 (46.18%), Query Frame = -3 Query: 668 LFCNFKSFVSENQEMST-NVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVI-----------------AMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQ 1360 L CN SEN ++ L +A TE+ +L + K P++A +GSC L ++ +YI N GDSR VL E I A+QL+++H+ S + +R+ HP+DP + RVKG ++V+ R+ G +LK+ ++N + LL FR+ P +S PSL HKL D+FLI +SDGL+++ +N++AV V+ Sbjct: 364 LRCN-----SENDHVAVLKALTRALHRTEEAYLDIADKMVGEFPELALMGSCVLAMLMKGEDMYIMNVGDSRAVLATMDSVDLEQISQGSFDGSVGDCPPCLSAVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKD----RVKGSLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVE 574 HSP 2 Score: 40.0466 bits (92), Expect = 3.912e-23 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ LV+ L AA K M + +L +I G RR +HDD++VIV+ L+ Sbjct: 586 AQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLE 631
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C66_ARATH (Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.261e-22 Identity = 68/244 (27.87%), Postives = 108/244 (44.26%), Query Frame = -3 Query: 665 VLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRS----------------------------VRGA--KEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQT 1306 L +A TED +L L + P++A +GSC L ++ +Y+ N GDSR VLGR + GA ++ +QL+ EH+ + ++ HP+D V RVKG ++V+ R+ G +LK+ ++N + LL FR+ P ++ PSL HKL D+FLI +SDGL+E+ SNQ+A+ V++ Sbjct: 400 ALLQALRKTEDAYLELADQMVKENPELALMGSCVLVTLMKGEDVYVMNVGDSRAVLGRKPNLATGRKRQKELERIREDSSLEDKEILMNGAMRNTLVPLQLNMEHSTRIEEEVRRIKKEHPDDDCAVEND----RVKGYLKVT----------------------------RAFGAGFLKQPKWN-DALLEMFRIDYIGTSPYITCSPSLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVES 610 HSP 2 Score: 39.2762 bits (90), Expect = 3.261e-22 Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = -2 Query: 432 AKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 569 A+ L++ L AA K M + +L +I +G RR +HDD++VIV+ L+ Sbjct: 621 AQHLIQEVLLRAANKFGMDFHELLEIPQGDRRRYHDDVSVIVISLE 666
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0D2SHD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G421600 PE=3 SV=1) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 294/323 (91.02%), Postives = 295/323 (91.33%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANSLLEDQSQLESGLLSSSSSGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQ+S RSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN Sbjct: 1 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANSLLEDQSQLESGLLSSSSSGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 295 HSP 2 Score: 147.132 bits (370), Expect = 0.000e+0 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = -2 Query: 342 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLASLY*YRC 575 GIA+RLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD HLINGSSCYNSPMSIKGGGRLAS RC Sbjct: 296 GIARRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDTHLINGSSCYNSPMSIKGGGRLAS----RC 369
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0B0PXX7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_15428 PE=3 SV=1) HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0 Identity = 281/314 (89.49%), Postives = 284/314 (90.45%), Query Frame = -3 Query: 653 IEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1594 I G+SRGCLDGLLWYKDMGQHVYGDFSMAVVQANSLLEDQSQLESGLLSSSSSGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQ+S RSIGDAYLKKAEFN+EPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTS RN Sbjct: 9 IRGESRGCLDGLLWYKDMGQHVYGDFSMAVVQANSLLEDQSQLESGLLSSSSSGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQIS----------------------------RSIGDAYLKKAEFNEEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSTRN 294 HSP 2 Score: 152.525 bits (384), Expect = 0.000e+0 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = -2 Query: 357 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLASL 575 GIA+RLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLASL Sbjct: 295 GIARRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLASL 367
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A061ETI3_THECC (Phosphatase 2C family protein OS=Theobroma cacao GN=TCM_022056 PE=3 SV=1) HSP 1 Score: 488.034 bits (1255), Expect = 9.386e-164 Identity = 261/323 (80.80%), Postives = 279/323 (86.38%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 M+KSCWKP++EGDS G +DGLLWYKD+GQHVYG+FSMAV+QANSLLEDQSQLESG LSSSSSGPYG FIGVYDGHGGPEAS FIN+NLFCN KSFVSE+QE+S NVLRKAF ATE+ FLSLVRKQWL KPQMASVGSCCLTG ICNGLLYIAN GDSRVVLGR+ RGA+EVIAMQLSTEHNAS DAVRDELRSLHP+DPQIVVMKHKVWRVKGLIQ+S RSIGDAYLKKAEFNKEPLLPKFRL E F+KPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQ+AV+IVQTSPRN Sbjct: 1 MIKSCWKPTVEGDS-GRVDGLLWYKDLGQHVYGEFSMAVIQANSLLEDQSQLESGPLSSSSSGPYGIFIGVYDGHGGPEASRFINDNLFCNLKSFVSEHQEISINVLRKAFSATEENFLSLVRKQWLGKPQMASVGSCCLTGAICNGLLYIANVGDSRVVLGRAERGAREVIAMQLSTEHNASIDAVRDELRSLHPHDPQIVVMKHKVWRVKGLIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLPESFQKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQEAVKIVQTSPRN 294 HSP 2 Score: 99.3673 bits (246), Expect = 3.647e-19 Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = -2 Query: 384 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSI 575 GIA+RLVK ALKEAA+KREMRYSDL KIDRGVRRHFHDDITVIVVFLDP+LING S Y+SP+SI Sbjct: 295 GIARRLVKAALKEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDPNLINGGSSYSSPLSI 358
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0D2S517_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G177400 PE=3 SV=1) HSP 1 Score: 465.307 bits (1196), Expect = 8.356e-156 Identity = 242/326 (74.23%), Postives = 268/326 (82.21%), Query Frame = -3 Query: 644 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVSL 1621 MVKSCW PS EGDS G +DGLLW KD+GQH+YG+FSMAV+QANS+LEDQSQ+ESG LSS++SGPYGTF GVYDGHGG EAS ++N+NLF N KSF SE+QE+S +VLRKAF TE+ FLSLVRKQW VKP MASVGSCCL G+ICNGLLYIANAGDSRVVLGRS RG K+ AMQLS EHNAS D VR+ELRSLHPNDP IVV KH+VWRVKGLIQ+S RSIGDAYLKKAEFNKEPLLPKFRL EPF+KPILSAEPS+LVHKLHPDDQFLIFASDGLWEH+SNQ+AV+IVQTSPRNVS Sbjct: 1 MVKSCWNPSAEGDSGGRVDGLLWCKDLGQHMYGEFSMAVIQANSMLEDQSQIESGPLSSTTSGPYGTFFGVYDGHGGTEASRYVNDNLFSNLKSFASEHQEISADVLRKAFSTTEENFLSLVRKQWHVKPHMASVGSCCLIGIICNGLLYIANAGDSRVVLGRSGRGTKQAKAMQLSVEHNASIDTVREELRSLHPNDPHIVVKKHRVWRVKGLIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLPEPFQKPILSAEPSVLVHKLHPDDQFLIFASDGLWEHISNQEAVKIVQTSPRNVSF 298
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0D2RXZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G177400 PE=3 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 2.023e-153 Identity = 240/323 (74.30%), Postives = 266/323 (82.35%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVKSCW PS EGDS G +DGLLW KD+GQH+YG+FSMAV+QANS+LEDQSQ+ESG LSS++SGPYGTF GVYDGHGG EAS ++N+NLF N KSF SE+QE+S +VLRKAF TE+ FLSLVRKQW VKP MASVGSCCL G+ICNGLLYIANAGDSRVVLGRS RG K+ AMQLS EHNAS D VR+ELRSLHPNDP IVV KH+VWRVKGLIQ+S RSIGDAYLKKAEFNKEPLLPKFRL EPF+KPILSAEPS+LVHKLHPDDQFLIFASDGLWEH+SNQ+AV+IVQTSPRN Sbjct: 1 MVKSCWNPSAEGDSGGRVDGLLWCKDLGQHMYGEFSMAVIQANSMLEDQSQIESGPLSSTTSGPYGTFFGVYDGHGGTEASRYVNDNLFSNLKSFASEHQEISADVLRKAFSTTEENFLSLVRKQWHVKPHMASVGSCCLIGIICNGLLYIANAGDSRVVLGRSGRGTKQAKAMQLSVEHNASIDTVREELRSLHPNDPHIVVKKHRVWRVKGLIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLPEPFQKPILSAEPSVLVHKLHPDDQFLIFASDGLWEHISNQEAVKIVQTSPRN 295 HSP 2 Score: 96.2857 bits (238), Expect = 4.214e-18 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = -2 Query: 375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575 GIA+RL+K ALKEAA+KREMRYSDL KIDRGVRRHFHDDITV+VVF+DP+LING S P+SIKGG Sbjct: 296 GIARRLIKAALKEAAKKREMRYSDLRKIDRGVRRHFHDDITVVVVFIDPNLINGGSSSYFPLSIKGG 362
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0B0ND21_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_13999 PE=3 SV=1) HSP 1 Score: 456.447 bits (1173), Expect = 3.378e-151 Identity = 237/323 (73.37%), Postives = 266/323 (82.35%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVKSCW PS EGDS G +DGLLW KD+GQH+YG+FSMAV+QANS+LEDQSQ+ESG LSS++SGPYGTFIGVYDGHGG EAS ++N+NLF N KSF SE+QE+S +VLRKAF TE+ FLSLVRK+W VKP +ASVGSCCL G+ICNGLLYIANAGDSRVVLGRS RG K+ AMQLS EHNAS + VR+ELRSLHPNDP IVVMKH+VWRVKGLIQ+S R IGDAYLKKAEFNKEPLLPKFRL EPF+KPILSAEPS+LVHKL PDDQFLIFASDGLWEH+SNQ+AV+IVQTSPRN Sbjct: 1 MVKSCWNPSAEGDSGGRVDGLLWCKDLGQHMYGEFSMAVIQANSMLEDQSQIESGPLSSTTSGPYGTFIGVYDGHGGTEASRYVNDNLFSNLKSFASEHQEISADVLRKAFSTTEENFLSLVRKEWHVKPHVASVGSCCLIGIICNGLLYIANAGDSRVVLGRSGRGTKQAKAMQLSVEHNASIETVREELRSLHPNDPHIVVMKHRVWRVKGLIQIS----------------------------RCIGDAYLKKAEFNKEPLLPKFRLPEPFQKPILSAEPSVLVHKLQPDDQFLIFASDGLWEHISNQEAVKIVQTSPRN 295 HSP 2 Score: 97.4413 bits (241), Expect = 1.711e-18 Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = -2 Query: 360 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLAS 575 GIA+RL+K ALKEAA+KREMRYSDL KIDRGVRRHFHDDITV+VVF+DP+LING S P+SIK GGRLA+ Sbjct: 296 GIARRLIKAALKEAAKKREMRYSDLRKIDRGVRRHFHDDITVVVVFIDPNLINGGSSSYFPLSIK-GGRLAA 366
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: F6HQW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02970 PE=3 SV=1) HSP 1 Score: 427.943 bits (1099), Expect = 5.068e-143 Identity = 223/330 (67.58%), Postives = 259/330 (78.48%), Query Frame = -3 Query: 653 MVKSCWKPSIEGD-------SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CWKPS+EGD S G +DGLLWYKD+GQH+ G+FSMAV+QANSLLEDQSQLESG LS SGPYGTFIGVYDGHGGPEAS F+N NLF N K F +E+QE+S +V+RKAF ATE+ FLSLV+KQWL KPQ+ASVGSCCL G+ICNGLLYIAN GDSR VLGR+ R ++EV A+QLSTEHNAS ++VR+ELRSLHP+D IVV++HKVWRVKGLIQVS RSIGDAYLKKAEFN+EPLL +FRL +PF +PILS+EPS+ VHK+ P+DQF+IFASDGLWEHLSNQ+AV IV PRN Sbjct: 1 MVKPCWKPSVEGDGTRGKGDSSGRVDGLLWYKDLGQHINGEFSMAVIQANSLLEDQSQLESGPLSFLDSGPYGTFIGVYDGHGGPEASRFVNENLFPNLKKFATEHQEISESVIRKAFSATEEGFLSLVKKQWLTKPQIASVGSCCLAGIICNGLLYIANVGDSRAVLGRAERASREVTAIQLSTEHNASIESVREELRSLHPHDKHIVVLRHKVWRVKGLIQVS----------------------------RSIGDAYLKKAEFNREPLLSRFRLPQPFIEPILSSEPSISVHKIRPEDQFIIFASDGLWEHLSNQEAVNIVNNYPRN 302 HSP 2 Score: 110.153 bits (274), Expect = 5.068e-143 Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -2 Query: 375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575 GIA++LVKTAL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+VVFLDP LI SS P SIKGG Sbjct: 303 GIARKLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDPLLIKRSSSSGCPFSIKGG 369
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A0A0LAA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736630 PE=3 SV=1) HSP 1 Score: 420.624 bits (1080), Expect = 9.739e-141 Identity = 216/323 (66.87%), Postives = 254/323 (78.64%), Query Frame = -3 Query: 653 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1621 MVK CWKP +GDS G +DGLLW KD+G HVYG FSMAV+QAN+++EDQSQLESG LS ++ GP GTF+GVYDGHGG EAS F+N+NLF N K + S +Q++S NV+RKAF ATE+ FLSLV+KQWL +P++AS GSCCL G+ICNG LYIANAGDSRVVLGR+ R +EVIA+QLSTEHNAS ++VRDELR +HP DPQIV++KH VWRVKGLIQVS RSIGDAYLKKA+FN+ PL PKF+L EPF KPILSAEPS+LVHKL PDDQ+LIFASDGLWEHLSNQ+AV IV + PRN Sbjct: 1 MVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPLGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVS----------------------------RSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRN 295 HSP 2 Score: 109.768 bits (273), Expect = 9.739e-141 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = -2 Query: 360 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLING--SSCYNSPMSIKGGGRLAS 575 GIA+RLVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDI+V+VVFLDPHLING S C +SIKGG L S Sbjct: 296 GIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCS---LSIKGGEGLPS 366
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A061FP40_THECC (Phosphatase 2C family protein isoform 1 OS=Theobroma cacao GN=TCM_043030 PE=3 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 1.007e-140 Identity = 219/332 (65.96%), Postives = 261/332 (78.61%), Query Frame = -3 Query: 653 LKMVKSCWKPSIEG-------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +++V CW+PS+EG D+ G +DGLLWYKD GQHV G+FSMAV+QAN+LLED SQLESG +SS SGP+GTF+G+YDGHGGPEA+ FI +LF + K F SEN MS +V+ KAFLATE+ FL+LV+KQWL KPQ+ASVG+CCL G+IC+GLLYIANAGDSRVVLGR + KEV A+QLS+EHNAS ++VR+ELRSLHP+DPQIVV+KHKVWRVKG+IQ+S RSIGDAYLKKAEFNKEPLLPKFRL EPF+KPIL AEP++LV KLHP+DQFLIFASDGLWEHLSNQ+AV +V T PRN Sbjct: 7 MRIVSPCWRPSVEGENSSRGGDANGRVDGLLWYKDSGQHVTGEFSMAVIQANNLLEDHSQLESGPMSSVESGPHGTFVGIYDGHGGPEAAKFITEHLFGHIKKFTSENHGMSADVINKAFLATEEDFLTLVKKQWLSKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKEVKAVQLSSEHNASVESVREELRSLHPDDPQIVVLKHKVWRVKGIIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLPEPFQKPILQAEPAILVQKLHPEDQFLIFASDGLWEHLSNQEAVNVVNTCPRN 310 HSP 2 Score: 103.99 bits (258), Expect = 1.007e-140 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 GIA+RLVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLD HLI+ S +SI+GGG Sbjct: 311 GIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDSHLISRSYWRGPMVSIRGGG 378
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A061FUF7_THECC (Phosphatase 2C family protein isoform 2 OS=Theobroma cacao GN=TCM_043030 PE=3 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 4.435e-139 Identity = 219/337 (64.99%), Postives = 262/337 (77.74%), Query Frame = -3 Query: 653 LKMVKSCWKPSIEG-------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKS-----FVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627 +++V CW+PS+EG D+ G +DGLLWYKD GQHV G+FSMAV+QAN+LLED SQLESG +SS SGP+GTF+G+YDGHGGPEA+ FI +LF + K+ F SEN MS +V+ KAFLATE+ FL+LV+KQWL KPQ+ASVG+CCL G+IC+GLLYIANAGDSRVVLGR + KEV A+QLS+EHNAS ++VR+ELRSLHP+DPQIVV+KHKVWRVKG+IQ+S RSIGDAYLKKAEFNKEPLLPKFRL EPF+KPIL AEP++LV KLHP+DQFLIFASDGLWEHLSNQ+AV +V T PRN Sbjct: 7 MRIVSPCWRPSVEGENSSRGGDANGRVDGLLWYKDSGQHVTGEFSMAVIQANNLLEDHSQLESGPMSSVESGPHGTFVGIYDGHGGPEAAKFITEHLFGHIKTINGAEFTSENHGMSADVINKAFLATEEDFLTLVKKQWLSKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKEVKAVQLSSEHNASVESVREELRSLHPDDPQIVVLKHKVWRVKGIIQIS----------------------------RSIGDAYLKKAEFNKEPLLPKFRLPEPFQKPILQAEPAILVQKLHPEDQFLIFASDGLWEHLSNQEAVNVVNTCPRN 315 HSP 2 Score: 103.99 bits (258), Expect = 4.435e-139 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = -2 Query: 372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575 GIA+RLVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLD HLI+ S +SI+GGG Sbjct: 316 GIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDSHLISRSYWRGPMVSIRGGG 383 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pages
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094850 ID=g.barbadense_cottongen_reftransV1_0094850; Name=g.barbadense_cottongen_reftransV1_0094850; organism=Gossypium barbadense; type=contig; length=2139bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|