g.barbadense_cottongen_reftransV1_0094850, g.barbadense_cottongen_reftransV1_0094850 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094850
Unique Name	g.barbadense_cottongen_reftransV1_0094850
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2139

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 1.372e-94
Identity = 153/303 (50.50%), Postives = 207/303 (68.32%), Query Frame = -3

Query:  656 LLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMST-NVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1561
            LLW++D+G++  GDFSMAV+QAN +LEDQSQ+ESG         +GTF+GVYDGHGGPEA+ ++ ++LF +F+   +E Q + T   + +AF ATE+ F S+V + W   P +A+VG+CCL GVI    L++A+ GDSRVVLG+       + A+QLSTEHNA+ + +R EL+ LHP+DPQIVV +H VWRVKG+IQVS                            RSIGD Y+K+ EFNKEP+  KFR+ EP ++P++SA P++L H LHP+D FLIFASDGLWEHL+N++AV IV   PR
Sbjct:   45 LLWFRDLGKYCGGDFSMAVIQANQVLEDQSQVESGN--------FGTFVGVYDGHGGPEAARYVCDHLFNHFREISAETQGVVTRETIERAFHATEEGFASIVSELWQEIPNLATVGTCCLVGVIYQNTLFVASLGDSRVVLGKK-GNCGGLSAIQLSTEHNANNEDIRWELKDLHPDDPQIVVFRHGVWRVKGIIQVS----------------------------RSIGDMYMKRPEFNKEPISQKFRIAEPMKRPLMSATPTILSHPLHPNDSFLIFASDGLWEHLTNEKAVEIVHNHPR 310

HSP 2 Score: 82.8037 bits (203), Expect = 1.372e-94
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -2

Query:  417 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLIN 575
            G AKRL+K AL EAA+KREMRYSDL KID+ VRRHFHDDITVIVVFL+  LI+
Sbjct:  312 GSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVVFLNHDLIS 364

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C25_ORYSJ (Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 7.160e-93
Identity = 150/302 (49.67%), Postives = 198/302 (65.56%), Query Frame = -3

Query:  656 LLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1561
            LLW +D+G+H  G+FS AVVQAN  LED SQ+E+G           TF+GVYDGHGG +A+ FI+++LF +      E++ +S  V+R AF ATE+ FL+LVR+   +KP +A+VGSCCL G+I  G+LY+AN GDSR V+G   R  K + A Q++ +HNA  + VR EL S HP+D QIVV+KH VWR+KG+IQVS                            R+IGDAYLK+ EF  +P + +FRL EP R+P+L+AEPS+    L   DQF+IFASDGLWEHL+NQQAV IV  +PR
Sbjct:   39 LLWSRDLGRHAAGEFSFAVVQANEALEDHSQVETGSA--------ATFVGVYDGHGGADAARFISDHLFAHLIRLARESETVSEEVVRGAFSATEEGFLTLVRRTQFLKPMIAAVGSCCLVGIIWRGVLYVANLGDSRAVVGYLGRTNK-ITAEQITRDHNACKEEVRQELISRHPDDSQIVVLKHGVWRIKGIIQVS----------------------------RTIGDAYLKRREFALDPSITRFRLSEPLRRPVLTAEPSICTRVLSLQDQFVIFASDGLWEHLTNQQAVDIVYKNPR 303

HSP 2 Score: 84.7297 bits (208), Expect = 7.160e-93
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = -2

Query:  378 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKG 575
            GIAKRLV TALKEAA+KREMR+ DL K+++GVRR FHDDITV+VV++D  L+   +     +S++G
Sbjct:  305 GIAKRLVNTALKEAARKREMRFVDLKKVEKGVRRFFHDDITVVVVYIDHELLQEKNVSVPELSVRG 370

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.114e-90
Identity = 147/313 (46.96%), Postives = 195/313 (62.30%), Query Frame = -3

Query:  653 SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGA---KEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1582
            SR   DGLLW  ++  H  GD+S+AVVQANS LEDQSQ+ +            T++GVYDGHGGPEAS F+N +LF     F  E+  +S +V++KAF  TE++F  +V++   +KPQMA+VGSCCL G I N  LY+AN GDSR VLG  V G    K  +A +LST+HN + + VR E+++L+P+D QIV+    VWR+KG+IQVS                            RSIGD YLKK E+ ++P+  +     P R+P ++AEPS++V KL P D FLIFASDGLWEHLS++ AV IV   PR 
Sbjct:   15 SRASGDGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSS--------ATYVGVYDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFCGMVKRSLPMKPQMATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDHNVAVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQVS----------------------------RSIGDVYLKKPEYYRDPIFQRHGNPIPLRRPAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRT 291

HSP 2 Score: 84.3445 bits (207), Expect = 5.114e-90
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = -2

Query:  375 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 575
            GIA+RLV+ AL+EAA+KREMRY D+ KI +G+RRHFHDDI+VIVV+LD    N +S  NS +  +GG
Sbjct:  292 GIARRLVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQ---NKTSSSNSKLVKQGG 355

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C36_ORYSJ (Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.231e-88
Identity = 147/304 (48.36%), Postives = 197/304 (64.80%), Query Frame = -3

Query:  656 DGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1567
            DGLLW++D+ +   G+ S+AVVQ N +LEDQ ++ESG    +      T IGV+DGH GP+A+ F  ++L  N +   S  + ++ + +R AFLATE+ FL++V + W  +P MA+VG+CCL GV+    L++AN GDSR VLG+ V  A ++ A QLS+EHNA+ + VR EL + HP+DPQIV +KH VWRVKG+IQVS                            RS+GDAYLK +++N E + PKFRL EPF +PILSA PS++   L P D F+IFASDGLWEHLSNQQAV IV    R
Sbjct:   45 DGLLWWRDLARCHAGELSVAVVQGNHVLEDQCRVESGPPPLA-----ATCIGVFDGHAGPDAARFACDHLLPNLREAASGPEGVTADAIRDAFLATEEGFLAVVSRMWEAQPDMATVGTCCLVGVVHQRTLFVANLGDSRAVLGKKVGRAGQITAEQLSSEHNANEEDVRQELMAQHPDDPQIVALKHGVWRVKGIIQVS----------------------------RSLGDAYLKHSQYNTEQIKPKFRLPEPFSRPILSANPSIIARCLQPSDCFIIFASDGLWEHLSNQQAVEIVHNHQR 315

HSP 2 Score: 77.411 bits (189), Expect = 1.231e-88
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = -2

Query:  432 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 575
            G A+RL+K AL EAA+KREMRYSDL KID+ VRRHFHDDITVIV+F++
Sbjct:  317 GSARRLIKAALHEAARKREMRYSDLMKIDKKVRRHFHDDITVIVLFIN 364

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 4.847e-88
Identity = 139/302 (46.03%), Postives = 193/302 (63.91%), Query Frame = -3

Query:  656 LLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1561
            LLW+ ++  H  G++S+AV QAN+ LEDQ Q+ +         P  TF+GVYDGHGGPEAS FI++ LF +   F SE   MST+ +++AF ATE++FL +V++ WL +PQ+ASVGSCCL G I + +LY+AN GDSR VLGR     +EV+A +LS +HN + + VR EL   HP+D +IV+    VWR+KG+IQVS                            RSIGD YLKK EF ++P+  ++    P ++P+++AEPS+  H+L   D FLIFASDGLWE L+++ AV IV  +PR
Sbjct:   29 LLWHAELKPHASGEYSIAVAQANAELEDQGQVVTS--------PAATFVGVYDGHGGPEASRFISSRLFPHLHRFASEQGGMSTDAIKRAFHATEEEFLHMVKRSWLKQPQIASVGSCCLVGAITDNVLYVANLGDSRAVLGRRGPDGREVVAERLSNDHNVAEEEVRKELTEQHPDDSRIVIYTRGVWRIKGIIQVS----------------------------RSIGDVYLKKPEFARDPIFRQYVCSIPLKRPVMTAEPSIKEHQLRQQDLFLIFASDGLWEQLTDKAAVDIVFKNPR 294

HSP 2 Score: 79.7221 bits (195), Expect = 4.847e-88
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = -2

Query:  372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD-------PHLINGSS--CYNSPMSIKGGG 575
            GIAKRLV+ AL EAA+KREMRY+D+  I+RG RR+FHDDITV+VV+LD       P+L N +S    N+P+ I  G 
Sbjct:  296 GIAKRLVRAALTEAARKREMRYTDIKHIERGSRRNFHDDITVVVVYLDHHKHGVRPNLGNRNSFRFTNAPVDIFSGS 372

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.199e-87
Identity = 147/328 (44.82%), Postives = 192/328 (58.54%), Query Frame = -3

Query:  653 LKMVKSC---WKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627
            L+ V  C   W P          DG+LW  ++  H  G+FSMA  QAN  +EDQ+Q+ +         P  T +GVYDGHGG +AS F+ + LF + + F  E   MST V+R+AF A E++FL  VR+ W  +P+MA+VGSCCL G I    LY+AN GDSR VLGR V G    +A +L+ EHNA+ + VR EL +L+P+D QIVV     WRVKG+IQVS                            R+IGD YLKK E++ +P+        P ++P LSAEPS+ V KL P+D FLIFASDGLWEHLS+  AV+IV  +PR 
Sbjct:    2 LRAVARCCGHWPPGA-----AAADGMLWQTELRPHAAGEFSMAAAQANLAMEDQAQVLAS--------PAATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVS----------------------------RTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRT 288

HSP 2 Score: 81.2629 bits (199), Expect = 1.199e-87
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = -2

Query:  384 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPH--------LINGSSCYNSPMSI 575
            GIA RLVK ALKEA +KRE+ + DL  I++GVRRHFHDDI+VIVV+LD H        + + S+C N+P+ I
Sbjct:  289 GIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDI 360

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.199e-87
Identity = 147/328 (44.82%), Postives = 192/328 (58.54%), Query Frame = -3

Query:  653 LKMVKSC---WKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627
            L+ V  C   W P          DG+LW  ++  H  G+FSMA  QAN  +EDQ+Q+ +         P  T +GVYDGHGG +AS F+ + LF + + F  E   MST V+R+AF A E++FL  VR+ W  +P+MA+VGSCCL G I    LY+AN GDSR VLGR V G    +A +L+ EHNA+ + VR EL +L+P+D QIVV     WRVKG+IQVS                            R+IGD YLKK E++ +P+        P ++P LSAEPS+ V KL P+D FLIFASDGLWEHLS+  AV+IV  +PR 
Sbjct:    2 LRAVARCCGHWPPGA-----AAADGMLWQTELRPHAAGEFSMAAAQANLAMEDQAQVLAS--------PAATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVS----------------------------RTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRT 288

HSP 2 Score: 81.2629 bits (199), Expect = 1.199e-87
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = -2

Query:  384 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPH--------LINGSSCYNSPMSI 575
            GIA RLVK ALKEA +KRE+ + DL  I++GVRRHFHDDI+VIVV+LD H        + + S+C N+P+ I
Sbjct:  289 GIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDI 360

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C68_ARATH (Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.358e-87
Identity = 147/305 (48.20%), Postives = 196/305 (64.26%), Query Frame = -3

Query:  656 LLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGR---SVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1561
            LLW +++ +H +GDFS+AVVQAN ++ED SQ+E+G            F+GVYDGHGGPEAS +I+++LF +      E   +S   LR AF ATE+ FL+LVR+   +KP +A+VGSCCL GVI  G L IAN GDSR VLG    +   + +++A QL+++HNA+ + VR ELRSLHP+D  IVV+KH VWR+KG+IQVS                            RSIGDAYLK+ EF+ +P  P+F L E  ++P+LSAEP +    L   D+F+IFASDGLWE ++NQQAV IV   PR
Sbjct:   43 LLWSRELERHSFGDFSIAVVQANEVIEDHSQVETGNG--------AVFVGVYDGHGGPEASRYISDHLFSHLMRVSRERSCISEEALRAAFSATEEGFLTLVRRTCGLKPLIAAVGSCCLVGVIWKGTLLIANVGDSRAVLGSMGSNNNRSNKIVAEQLTSDHNAALEEVRQELRSLHPDDSHIVVLKHGVWRIKGIIQVS----------------------------RSIGDAYLKRPEFSLDPSFPRFHLAEELQRPVLSAEPCVYTRVLQTSDKFVIFASDGLWEQMTNQQAVEIVNKHPR 311

HSP 2 Score: 77.411 bits (189), Expect = 1.358e-87
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = -2

Query:  378 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKG 575
            GIA+RLV+ A+  AA+KREM Y DL K++RGVRR FHDDITV+V+F+D  L+         +SIKG
Sbjct:  313 GIARRLVRRAITIAAKKREMNYDDLKKVERGVRRFFHDDITVVVIFIDNELLMVEKATVPELSIKG 378

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C29_ORYSJ (Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.186e-76
Identity = 138/314 (43.95%), Postives = 185/314 (58.92%), Query Frame = -3

Query:  653 DGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSV--------RGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKE-PLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1567
            DGL+W   +  H  GD+S+AV QAN  LEDQ+Q+           P  T +GVYDGHGGPEA+ F+N  LF   + F +++  +S  VL KAF  TE++F++ V++ W  +P++ SVGSCCL G I +G LY+AN GDSR VLGR          +G   V+  +LS +HN + + VR EL+ LHP+D  IV+  H VWR+KG+IQVS                            RSIGD YLKK E  K  P+L +     P R+P++SA P++   KL P DQF+IFASDGLWE L+++ AV IV  SPR 
Sbjct:   29 DGLVWDVALKAHASGDYSVAVAQANEALEDQAQVFVS--------PAATLVGVYDGHGGPEAARFVNKRLFSLIQEFAAQSGGISAEVLEKAFGETEEEFVASVQRSWPSQPRILSVGSCCLVGAIEDGTLYVANLGDSRAVLGRRSAAGAAHGRKGKNRVVPERLSRDHNVADEDVRRELKELHPDDSHIVLNTHGVWRIKGIIQVS----------------------------RSIGDVYLKKPEICKSNPMLQQTICPFPLRRPVMSAVPTIKTRKLRPGDQFVIFASDGLWEQLTDEAAVAIVAGSPRR 306

HSP 2 Score: 61.6178 bits (148), Expect = 1.186e-76
Identity = 27/49 (55.10%), Postives = 40/49 (81.63%), Query Frame = -2

Query:  432 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 578
            +G+A RLV+ A  EAA+K++++Y  +  I++G RRHFHDDITV+V+FLD
Sbjct:  306 RGVAMRLVRAAQLEAARKKDVKYERIRTIEKGQRRHFHDDITVVVLFLD 354

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Match: P2C61_ORYSJ (Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.125e-73
Identity = 127/312 (40.71%), Postives = 180/312 (57.69%), Query Frame = -3

Query:  662 SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQ-EMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKF---RLHEPFRKPILSAEPSLLVHKLHPD-DQFLIFASDGLWEHLSNQQAVRIVQTS 1582
            +RG  D L W  ++  H  G+FSMA  QAN+++EDQ+Q+ +         P  T +GVYDGHGGP+AS F+ + LF     F +E    +  +V+RKAFLA ++++L L+R       + A+ GSCCL G I    LY+ANAGDSR VLGR    A + +A +LSTEHN + + VR EL +LHP+D ++VV     WRVKG+IQV+                            R+IGD YLK  EF ++P + +           +P+++AEPS+   KL    D F++FASDGLWEHLS++ AV++V  S
Sbjct:   13 ARGGRDELTWQAELTAHAAGEFSMAAAQANAVMEDQAQVMAS--------PGATLVGVYDGHGGPDASRFLRSRLFPLIHEFAAERGGAVDADVIRKAFLAADEEYLQLLRWSLPNMSRAAASGSCCLLGAISGDTLYVANAGDSRAVLGRRA-AAGQTVAERLSTEHNVASEEVRRELAALHPDDGEVVVHARGAWRVKGIIQVA----------------------------RAIGDVYLKTPEFKRDPAVQRLCSAAAAVELARPVVTAEPSIHARKLKAGVDLFVVFASDGLWEHLSDEAAVQLVSKS 287

HSP 2 Score: 76.6406 bits (187), Expect = 3.125e-73
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = -2

Query:  432 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLD 578
            +G+A RLV+ AL EAA+KRE+R  DL +I+RGVRRHFHDDIT +VVFLD
Sbjct:  291 RGVAARLVQAALGEAARKREVRRGDLRRIERGVRRHFHDDITAVVVFLD 339

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: R0G5U7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013921mg PE=3 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 2.996e-135
Identity = 212/332 (63.86%), Postives = 253/332 (76.20%), Query Frame = -3

Query:  653 LKMVKSCWK-PSIEG------DSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1627
            L+MV  CW+ PS++G      D+ G  DGLLWYKD G HV GDFSM+V+QAN+LLED S+LESG +S   SGP  TF+GVYDGHGGPEA+ F+N +LF N + F SEN  MS +V+ KAFLATE+ FLSLVR+QW +KPQ+ASVG+CCL G+IC+GLLYIANAGDSRVVLGR  +  K V A+QLS+EHNAS ++VR+ELRSLHP+DPQIVV+KHKVWRVKG+IQVS                            RSIGDAYLKKAEFN+EPLL KFR+ E F KPIL AEP++ VHK+HP+DQFLIFASDGLWEHL+NQ+AV IV T PRN
Sbjct:    8 LRMVVPCWRRPSVKGEHSTKNDANGRCDGLLWYKDSGNHVAGDFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIRKFTSENHGMSASVITKAFLATEEDFLSLVRRQWQIKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPDDPQIVVLKHKVWRVKGIIQVS----------------------------RSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPTVTVHKIHPEDQFLIFASDGLWEHLTNQEAVDIVNTYPRN 311

HSP 2 Score: 106.686 bits (265), Expect = 2.996e-135
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -2

Query:  363 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGGRLA 578
             GIAK+L+KTAL+EAA+KREMRYSDL KIDRGVRRHFHDDITVIVVFLD +L++ S+     +SI GGG LA
Sbjct:  311 NGIAKKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRSASRRPLLSISGGGDLA 382

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: U5FKV8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s08370g PE=3 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 3.282e-135
Identity = 218/322 (67.70%), Postives = 252/322 (78.26%), Query Frame = -3

Query:  656 MVKSCWKPSIEGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPR 1621
            MVK CW+P +E D+   +DGLLWYK++G HVYG+FSMAV+QANSL+EDQSQLESG LSS++SGP GTF+GVYDGHGG EAS FIN+N+F NFK  VSE Q++S   ++KAF +TE+ FLSLV+KQWL KP MASVGSCCL GVICNGLLYIANAGDSRVVLGR+ RG +EV A+QLSTEHNA+ + VR+ELR LHPND QIVV KHKVWRVKG+IQVS                            RSIGDAYLKK+EFN+EPL PKFRL EPF KPIL+ EP +LV KL P D+FLIFASDGLWEHLSNQ+AV IVQ  PR
Sbjct:    1 MVKPCWRPCVEDDATEKVDGLLWYKNLGNHVYGEFSMAVIQANSLMEDQSQLESGPLSSTNSGPQGTFVGVYDGHGGTEASKFINHNVFSNFKKIVSEQQDVSEITIKKAFASTEEGFLSLVKKQWLSKPHMASVGSCCLVGVICNGLLYIANAGDSRVVLGRAERGTREVTALQLSTEHNANIETVRNELRCLHPNDSQIVVQKHKVWRVKGIIQVS----------------------------RSIGDAYLKKSEFNREPLQPKFRLPEPFHKPILNPEPEILVRKLQPGDRFLIFASDGLWEHLSNQEAVDIVQNFPR 294

HSP 2 Score: 82.0333 bits (201), Expect = 2.216e-13
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = -2

Query:  375 QGIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGG 578
            +GIAK LVK AL++AA+KREMRY+DL +I+RGVRRHFHDDI+VIVV++D HLI+ SS    P+SI+GG
Sbjct:  295 KGIAKMLVKAALRKAAKKREMRYTDLKRIERGVRRHFHDDISVIVVYIDSHLISRSSIGGHPLSIRGG 362

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: W1NJK0_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00023p00195110 PE=3 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 6.441e-135
Identity = 216/337 (64.09%), Postives = 251/337 (74.48%), Query Frame = -3

Query:  647 LKMVKSCWKPSI----------EGDSRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNVS 1627
            +KMV SCWKP++          +G S G L+GLLWYKD+GQHV G+FSMAVVQANSLLEDQSQ+ESG LS S  GP+GTF+GVYDGHGGPE S FIN+NLF N K F SE Q MSTNV+ KAFLATE+ FLSLV+KQWL KPQ+A+VGSCCL G++C G LYIAN GDSR VL RS++  +EV A+QLS+EHNAS ++VR ELRSLHP+D +IVV+KHKVWRVKGLIQVS                            RSIGD YLKKAEFN+EPL PKFRL EP R+PILSAEPS+  H +   DQF+IFASDGLWEHLSNQ+AV IV    R+ S
Sbjct:    1 MKMVGSCWKPAVVERFVRNSNVDGAS-GRLEGLLWYKDLGQHVNGEFSMAVVQANSLLEDQSQVESGPLSLSELGPHGTFVGVYDGHGGPETSRFINDNLFQNLKKFTSEQQAMSTNVIHKAFLATEEAFLSLVKKQWLTKPQLAAVGSCCLVGIVCGGTLYIANLGDSRAVLARSIKATREVAAIQLSSEHNASIESVRQELRSLHPDDSRIVVLKHKVWRVKGLIQVS----------------------------RSIGDVYLKKAEFNREPLYPKFRLSEPIRRPILSAEPSITTHTISALDQFVIFASDGLWEHLSNQEAVDIVHNHSRSGS 308

HSP 2 Score: 104.375 bits (259), Expect = 6.441e-135
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = -2

Query:  372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575
            G A+RLVK AL+EAA+KREMRYSDL KIDRGVRRHFHDDITV+V+FLDP+L++ SS      S++GGG
Sbjct:  307 GSARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDITVVVLFLDPYLVSQSSIRGPKSSLRGGG 374

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A059BI40_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02783 PE=3 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 1.212e-134
Identity = 217/333 (65.17%), Postives = 258/333 (77.48%), Query Frame = -3

Query:  650 LKMVKSCWKPSIEGD-------SRGCLDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRNV 1627
            +++V  CWKPS+EGD       + G +DGLLWYKD G  V G+FSMAV+QAN+LLEDQSQ+ESG +SS  SGP GTF+GVYDGHGGPEAS F+N+ LF   K + SENQ MS +V++KAFLATE++FLS+V+KQW +KPQ+ASVGSCCL G++C G LYIANAGDSRVVLGR  +  KEV A+QLS EHNASF++VR+ELR LHP+DPQIVV+KHKVWRVKG+IQVS                            RSIGDAYLKKAEFNKEPLL KFRL EPF +PIL AEPS+LV +++P+DQFLIFASDGLWEHLSNQ+AV IVQ  PRNV
Sbjct:    7 MRIVSPCWKPSVEGDDSGKSGDASGRVDGLLWYKDSGHLVNGEFSMAVIQANTLLEDQSQVESGPMSSLESGPQGTFVGVYDGHGGPEASRFVNDRLFDYVKKYTSENQGMSADVIKKAFLATEEEFLSMVKKQWPIKPQIASVGSCCLVGIVCGGQLYIANAGDSRVVLGRMEKTVKEVKAIQLSYEHNASFESVREELRLLHPDDPQIVVLKHKVWRVKGVIQVS----------------------------RSIGDAYLKKAEFNKEPLLAKFRLPEPFHRPILKAEPSVLVQQIYPEDQFLIFASDGLWEHLSNQEAVDIVQNCPRNV 311

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Match: A0A068U770_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_12 OS=Coffea canephora GN=GSCOC_T00017697001 PE=3 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 1.543e-134
Identity = 211/333 (63.36%), Postives = 257/333 (77.18%), Query Frame = -3

Query:  653 KMVKSCWKPSIEGDSR--------GC-LDGLLWYKDMGQHVYGDFSMAVVQANXXXXXXXXXXXXXXXXXXXGPYGTFIGVYDGHGGPEASSFINNNLFCNFKSFVSENQEMSTNVLRKAFLATEDKFLSLVRKQWLVKPQMASVGSCCLTGVICNGLLYIANAGDSRVVLGRSVRGAKEVIAMQLSTEHNASFDAVRDELRSLHPNDPQIVVMKHKVWRVKGLIQVS*TLKLS*K*NHFHXXXXXXXXXXXXXXSRSIGDAYLKKAEFNKEPLLPKFRLHEPFRKPILSAEPSLLVHKLHPDDQFLIFASDGLWEHLSNQQAVRIVQTSPRN 1624
            ++V  CW+PS+E + +        GC +DGL WYKD G+HV+G+FSMA++QAN++LED SQLESG LS   SGP GTF+G+YDGH GPEAS FI+++LF N K + SENQ MS +V+ KA+LATE+ FLS+V KQWL++PQMASVGSCCL G+IC+G+LYIANAGDSRVVLGR  + +KEV A+QLSTEHNAS  +VRDEL+S HP+DPQIVV++HKVWRVKGLIQVS                            RSIGDAYLKK EFN+EPLLPKFRL EPF+KPIL AEPS+ V KL+P+DQFL+FASDGLWEHLS+Q+AV IV T PRN
Sbjct:    8 RIVSPCWRPSVENEGQNSGRGGDLGCRVDGLWWYKDSGRHVHGEFSMAIIQANNVLEDYSQLESGPLSLEESGPQGTFVGIYDGHAGPEASQFISDHLFDNIKKYTSENQGMSADVISKAYLATEEAFLSMVEKQWLIRPQMASVGSCCLVGIICSGVLYIANAGDSRVVLGRMDKSSKEVKAVQLSTEHNASLPSVRDELQSSHPDDPQIVVLRHKVWRVKGLIQVS----------------------------RSIGDAYLKKTEFNREPLLPKFRLPEPFQKPILKAEPSIFVQKLYPEDQFLVFASDGLWEHLSSQEAVDIVNTCPRN 312

HSP 2 Score: 99.7525 bits (247), Expect = 1.543e-134
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = -2

Query:  372 GIAKRLVKTALKEAAQKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDPHLINGSSCYNSPMSIKGGG 575
            GIA++L+K AL EAA+KREMRYSDL KIDRGVRRHFHDDITVIVV+LD  LI+ SS   S +S++GGG
Sbjct:  313 GIARKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDFPLISRSSLRESVVSVRGGG 380

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
P2C42_ARATH	1.372e-94	50.50	Probable protein phosphatase 2C 42 OS=Arabidopsis ...	[more]
P2C25_ORYSJ	7.160e-93	49.67	Probable protein phosphatase 2C 25 OS=Oryza sativa...	[more]
P2C63_ARATH	5.114e-90	46.96	Probable protein phosphatase 2C 63 OS=Arabidopsis ...	[more]
P2C36_ORYSJ	1.231e-88	48.36	Probable protein phosphatase 2C 36 OS=Oryza sativa...	[more]
P2C78_ORYSJ	4.847e-88	46.03	Probable protein phosphatase 2C 78 OS=Oryza sativa...	[more]
P2C34_ORYSJ	1.199e-87	44.82	Probable protein phosphatase 2C 34 OS=Oryza sativa...	[more]
P2C34_ORYSI	1.199e-87	44.82	Probable protein phosphatase 2C 34 OS=Oryza sativa...	[more]
P2C68_ARATH	1.358e-87	48.20	Probable protein phosphatase 2C 68 OS=Arabidopsis ...	[more]
P2C29_ORYSJ	1.186e-76	43.95	Probable protein phosphatase 2C 29 OS=Oryza sativa...	[more]
P2C61_ORYSJ	3.125e-73	40.71	Probable protein phosphatase 2C 61 OS=Oryza sativa...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0094850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
R0G5U7_9BRAS	2.996e-135	63.86	Uncharacterized protein OS=Capsella rubella GN=CAR...	[more]
U5FKV8_POPTR	3.282e-135	67.70	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
W1NJK0_AMBTC	6.441e-135	64.09	Uncharacterized protein OS=Amborella trichopoda GN...	[more]
A0A059BI40_EUCGR	1.212e-134	65.17	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
A0A068U770_COFCA	1.543e-134	63.36	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001932	PPM-type phosphatase domain	SMART	SM00332	PP2C_4	coord: 30..220 e-value: 2.6E-8 score: 43.6
IPR001932	PPM-type phosphatase domain	PFAM	PF00481	PP2C	coord: 63..220 e-value: 2.9E-14 score: 53.2
IPR001932	PPM-type phosphatase domain	GENE3D	3.60.40.10		coord: 31..220 e-value: 9.3E-33 score: 112.8
IPR001932	PPM-type phosphatase domain	PROSITE	PS51746	PPM_2	coord: 36..220 score: 23.126
IPR001932	PPM-type phosphatase domain	SUPERFAMILY	81606	PP2C-like	coord: 45..219
IPR015655	Protein phosphatase 2C family	PANTHER	PTHR13832	PROTEIN PHOSPHATASE 2C	coord: 1..220
None	No IPR available	PANTHER	PTHR13832:SF367	PROTEIN PHOSPHATASE 2C 67-RELATED	coord: 1..220
IPR000222	PPM-type phosphatase, divalent cation binding	PROSITE	PS01032	PPM_1	coord: 70..78

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094850 ID=g.barbadense_cottongen_reftransV1_0094850; Name=g.barbadense_cottongen_reftransV1_0094850; organism=Gossypium barbadense; type=contig; length=2139bp
ATCATTATGAAAATTTTAACCTTTGCTGAAAAATACTAAACTAAGTCTAA
ATATGTTAAAAACGATGCAAGCAAACGAGCCATTAGTTTTGCATAAATAT
ATAAAAGGAAATTTCTTCACCATGTAAGGCCTAAGATAACATAAATCTAG
ACTGTGAATGAGGGACAGTATCAATTGTGGTAGCAGGAGAGCAGACAATT
TACCAACTAAATTGCATGAAACCATATCTACACATTGTCTTGCAATCTCA
ACAAGGTTAGTCCCCTATTTGTAAGGAAATTTGAGGATAAGTTTTTTAGA
CATTTAGCTCTTCATCTTAATTTCCTAGCGATGAGTCACCAGCAACGGTA
CTAGTAGAGGCTGGCAAGTCTTCCTCCGCCTTTTATCGACATGGGAGAGT
TGTAGCATGAGCTTCCATTGATCAAATGGGGATCTAGAAACACAACTATG
ACTGTTATATCATCATGAAAATGTCTCCTCACCCCTCTATCAATCTTGTT
CAGGTCTGAGTATCTCATTTCTCTTTTCTGTGCTGCTTCCTTGAGTGCTG
TTTTAACAAGTCTCTTTGCAATTCCCTGCATCAAAAGAAGAGTTAACCCA
ATGCCCAACCGTCTTTTTTCTGTGTTCAGCCATTTTGCCACGGTAAACTT
ACATTTCGTGGGCTAGTCTGCACAATTCTAACAGCTTGCTGGTTGCTCAA
GTGTTCCCAAAGACCATCAGAAGCAAAGATGAGAAACTGATCATCAGGGT
GGAGTTTATGTACTAACAATGACGGCTCGGCACTAAGGATTGGCTTTCGA
AACGGTTCATGCAGTCTAAATTTAGGCAGGAGAGGCTCTTTGTTGAATTC
TGCCTTCTTTAGATATGCATCACCTATGGATCTTGAAATCTGCAATGATA
AAAAGGAGGGGATAAATAAGAGACTTAAATGAAAATGATTTCATTTTCAG
CTCAATTTCAACGTTTAGCTTACCTGTATAAGGCCCTTAACACGCCAAAC
TTTGTGTTTCATCACAACAATCTGCGGATCATTGGGATGCAACGACCGAA
GCTCATCTCTTACGGCATCAAAACTTGCATTGTGTTCGGTCGATAATTGC
ATTGCTATAACTTCCTTAGCCCCTCTTACTGATCTTCCTAAGACTACTCT
GGAATCACCAGCATTTGCAATGTATAGCAGTCCATTGCAGATCACTCCCG
TCAAACAGCACGATCCGACCGATGCCATTTGCGGCTTAACCAGCCATTGC
TTCCTCACAAGGGAAAGAAATTTGTCTTCTGTTGCCAAGAAAGCCTTTCT
GAGAACATTTGTTGACATTTCTTGATTCTCAGACACAAATGACTTAAAAT
TGCAGAAAAGGTTGTTATTGATGAAGCTTGAAGCCTCAGGTCCACCATGT
CCATCATACACACCAATGAAAGTCCCGTACGGACCGGAACTACTCGAACT
CAACAATCCCGATTCGAGTTGGCTTTGATCCTCCAACAAACTATTGGCTT
GAACCACTGCCATTGAAAAATCTCCATAAACATGTTGCCCCATATCTTTA
TACCACAGTAAACCATCAAGGCACCCTCTAGAATCACCCTCAATAGATGG
TTTCCAACAGGATTTAACCATTTTCAGGTAATCAATTTTTCAGCAAATAT
ATATGTGTTCATAAAACCCTGATAAAAGAAGAAGATCCCAAGGCTCATTC
AGGGATCAAGTTTCTGTTTGTTGTACAATACTAGAACCCCAATACTTGGA
ACTATATAACCAAGAATTAGACATCATTATTATCAGACCTATTCCGAGAC
AAGGAAGGACCAAGTTGGGTATGGGCTAACTCAACTGCAGCGTGTGAAGT
TGAGACAAGAAAGCAATAGTTTATGTGAGTTCAGAGAATAAGGGGGGGTG
TGCTGGTGGCTGAGTACCTTGAATCTGGATTAAATGTCTTTGGTCCCTTC
ACGGTGTGCCATGTTTCACCAACAGACTTAGCTGGAAAAGCACCTTGGGA
TTCGATAGAGACAAACTTTGGTCTGAGATCAAAATACGCAACGGATAAGA
GGAGAGTTTGGGGTTTTTTTGGCAGATCTTGAGTTTTGTTTTTTTTTTTT
TTCTTGGGGAGTCAGAGGAGATCCAAGATGAGAAATAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001932	PPM-type_phosphatase-like_dom
IPR015655	PP2C
IPR000222	PP2C_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004722	protein serine/threonine phosphatase activity
GO:0043169	cation binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation

Search form

g.barbadense_cottongen_reftransV1_0094850, g.barbadense_cottongen_reftransV1_0094850 (contig) Gossypium barbadense

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