g.barbadense_cottongen_reftransV1_0094849, g.barbadense_cottongen_reftransV1_0094849 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Match: AAKB1_HUMAN (5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens GN=PRKAB1 PE=1 SV=4) HSP 1 Score: 69.707 bits (169), Expect = 1.352e-11 Identity = 34/86 (39.53%), Postives = 42/86 (48.84%), Query Frame = 3 Query: 873 PMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDM 1130 P F W GG V+L GSF WS+ P+ F I L G HQ+KFFVD +W HD +P V G VN I ++ D Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNWSK----LPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDF 160
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Match: AAKB1_PONAB (5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii GN=PRKAB1 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.389e-11 Identity = 34/86 (39.53%), Postives = 42/86 (48.84%), Query Frame = 3 Query: 873 PMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDM 1130 P F W GG V+L GSF WS+ P+ F I L G HQ+KFFVD +W HD +P V G VN I ++ D Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNWSK----LPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDF 160
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Match: AAKB1_BOVIN (5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus GN=PRKAB1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.810e-11 Identity = 33/86 (38.37%), Postives = 42/86 (48.84%), Query Frame = 3 Query: 873 PMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDM 1130 P F W GG V+L GSF WS+ P+ F I L G HQ+KFFVD +W HD +P V G VN + ++ D Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNWSK----LPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPVVTSQLGTVNNVIQVKKTDF 160
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Match: SNF4_KLULA (Nuclear protein SNF4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SNF4 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.097e-11 Identity = 64/278 (23.02%), Postives = 121/278 (43.53%), Query Frame = 3 Query: 1254 IAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDS--------LKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCI---CRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQAL 2054 I FL T+Y++LP S +++ LD + VK++ +IL + + APLWD+ +F G+L++ DF+ +++ + K + ++ N R + P+D+ L + +K++ +P+ + ++ + T ILK + C+ ++ L++P+ + + I +N M P + L+L VSS+PIVDE L+++Y D+ L K Y + L SV +AL Sbjct: 27 IRVFLQSKTSYDVLPVSYRLIVLDTSLLVKKSLNILLQNNVVSAPLWDAQTSKFAGLLTSSDFINVIQYYFH------------------NPDKFELVDKLQLNGLKDIERAIGIQPYDTRSIHPFRPLYEACVKMIESRSRRIPLIDQDE-ETQREIVVSVLTQYRILKFVALNCKEIRY-------LKRPLRELDI------ISTNNIMSCQMSTPVIDVIQLLTL--AGGVSSVPIVDEQGKLVNVYEAVDVLGLIKGGIYNDLSL---SVGEAL 267
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Match: AAKB2_HUMAN (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.308e-11 Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 3 Query: 873 PMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDM 1130 P W GG VF+ GSF WS IP+ F I L G HQ+KFFVD +W HD +P V G +N + ++ D Sbjct: 78 PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHND---FVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDF 160
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0D2R3U7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G342100 PE=4 SV=1) HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0 Identity = 455/479 (94.99%), Postives = 466/479 (97.29%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVF+ GSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIARE DMLPPSFSPE PGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDF+LILRELGNLGSDLTEEELE HTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNG VATVPITHSSSPDG FPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRP A+LGAALSLL+QAEVSSIPIVDEND+L+DIY+RSDIT LAKDKAYAQI LDEMS+HQALQL QDAN FNGQRCQMCL SDTLHKVMERLANPG RRLVIVEAG+KRVEGI+SLSD+FRFLLGV Sbjct: 1 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFISGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREQDMLPPSFSPEMPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFILILRELGNLGSDLTEEELEMHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGKVATVPITHSSSPDGSFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPNASLGAALSLLVQAEVSSIPIVDENDALIDIYARSDITTLAKDKAYAQIRLDEMSIHQALQLEQDANSFNGQRCQMCLQSDTLHKVMERLANPGTRRLVIVEAGSKRVEGIISLSDVFRFLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0B0MUK5_GOSAR (Sucrose nonfermenting 4-like protein OS=Gossypium arboreum GN=F383_29477 PE=4 SV=1) HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0 Identity = 448/469 (95.52%), Postives = 460/469 (98.08%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSL 2216 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCK QFVGVLSALDF+LILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRP A+LGAALSL +QAEVSSIPIVDEN++L+DIYSRSDIT LAKDKAYAQ+ L++MS+HQALQL QDAN FNGQRCQMCL SDTLHKVMERLANPG RRLVIVEAG+KRVEGI+SL Sbjct: 1 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKAQFVGVLSALDFILILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPNASLGAALSLFVQAEVSSIPIVDENNALIDIYSRSDITTLAKDKAYAQVRLEDMSIHQALQLEQDANSFNGQRCQMCLQSDTLHKVMERLANPGTRRLVIVEAGSKRVEGIISL 469
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0D2SPC2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G342100 PE=4 SV=1) HSP 1 Score: 893.649 bits (2308), Expect = 0.000e+0 Identity = 429/450 (95.33%), Postives = 438/450 (97.33%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGV 2159 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVF+ GSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIARE DMLPPSFSPE PGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDF+LILRELGNLGSDLTEEELE HTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNG VATVPITHSSSPDG FPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRP A+LGAALSLL+QAEVSSIPIVDEND+L+DIY+RSDIT LAKDKAYAQI LDEMS+HQALQL QDAN FNGQRCQMCL SDTLHKVMERLANPG+ Sbjct: 1 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFISGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREQDMLPPSFSPEMPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFILILRELGNLGSDLTEEELEMHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGKVATVPITHSSSPDGSFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPNASLGAALSLLVQAEVSSIPIVDENDALIDIYARSDITTLAKDKAYAQIRLDEMSIHQALQLEQDANSFNGQRCQMCLQSDTLHKVMERLANPGI 450
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A061FAC2_THECC (Sucrose nonfermenting 4 OS=Theobroma cacao GN=TCM_026622 PE=4 SV=1) HSP 1 Score: 872.848 bits (2254), Expect = 0.000e+0 Identity = 422/479 (88.10%), Postives = 449/479 (93.74%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MFAS P++G NSGVS LLIPMRFVWPYGG RVFL GSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKF+VD EWRHDEHQPFV G+YGVVNT+FIAREPDM+PP+ SPETPGRSNMD+DDV + E PTIS+ADLEVSRHRI+AFLSRHTAYELLPESGKV+ALDV+IAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGKV +SRQ+DG+ARSYPR LV AGP+DSLKDVALKIL G VATVPITHSS+ DG FPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGT VPKIGESN RPLAMLRP A+LGAALSLL+QAEVSSIPIVDENDSLLDIYSRSDITALA +KAYAQIHLDEMS+HQALQLGQDAN FNGQRCQMCL SDTLHKVMERLANPG RRLVIVEAG+KRVEGI+SLSD+FRFLLGV Sbjct: 1 MFASGPETGQENSGVSGPLLIPMRFVWPYGGRRVFLSGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFYVDGEWRHDEHQPFVNGNYGVVNTVFIAREPDMVPPTSSPETPGRSNMDVDDVFIRSEPVPTISDADLEVSRHRISAFLSRHTAYELLPESGKVIALDVNIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKVQLSRQIDGSARSYPRCLVHAGPYDSLKDVALKILKGKVATVPITHSSAQDGSFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTWVPKIGESNGRPLAMLRPNASLGAALSLLVQAEVSSIPIVDENDSLLDIYSRSDITALANNKAYAQIHLDEMSIHQALQLGQDANSFNGQRCQMCLRSDTLHKVMERLANPGARRLVIVEAGSKRVEGIISLSDVFRFLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0D2R3B4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G240500 PE=4 SV=1) HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0 Identity = 418/479 (87.27%), Postives = 444/479 (92.69%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MF S PD+G+GNSGVS LLIPMRFVWPYGG RVFL GSFTRW EHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVD EWRHDEHQPFV +YG+VNTIFIAREP+++ PSF+PETPGRSNMD+DD E PT+S+ADLE SR+R++AFLS HTAYELL ESGKV+ALDV+IAVKQAFHIL+EQGIPVAPLWDSCKGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGKV++ RQ+DGNARSYPR LV AGP+DSLKDVALKIL VATVPI HS+S DG FPQLLHLATLSEILKCICRHFKHS+SSLPILQQPICSIPLGT VP IGE N RPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSD+FRFLLGV Sbjct: 1 MFGSGPDTGHGNSGVSGPLLIPMRFVWPYGGRRVFLSGSFTRWLEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDGEWRHDEHQPFVNDNYGIVNTIFIAREPNLVAPSFNPETPGRSNMDVDDAFVSSEPVPTVSDADLEASRNRVSAFLSGHTAYELLAESGKVIALDVNIAVKQAFHILYEQGIPVAPLWDSCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKVYLGRQIDGNARSYPRCLVQAGPYDSLKDVALKILKSKVATVPIMHSTSQDGSFPQLLHLATLSEILKCICRHFKHSASSLPILQQPICSIPLGTWVPNIGEPNGRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDVFRFLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0B0M8D9_GOSAR (Sucrose nonfermenting 4-like protein OS=Gossypium arboreum GN=F383_14739 PE=4 SV=1) HSP 1 Score: 857.825 bits (2215), Expect = 0.000e+0 Identity = 416/479 (86.85%), Postives = 441/479 (92.07%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MF S PD+G+GNSGVS LLIPMRFVWPYGG RVFL GSFTRW EHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVD EWRHDEHQPFV +YG+VNTIFIAREP+++ PSFS ETPGRSNMD+DD E T+S+ADLEVSR+R++AFLSRHTAYELL ESGKV+ALDV+IAVKQAFHIL+EQGIPVAPLWDSCKGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGKV++ RQ+DGNARSYPR LV AGP+DSLKDVALKIL VATVPI HS+S DG F QLLHL TLSEILKCICRHFKHS+SSLPILQQPICSIPLGT VP IGE N RPLAMLRP ATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSD+FRFLLGV Sbjct: 1 MFGSGPDTGHGNSGVSGPLLIPMRFVWPYGGRRVFLSGSFTRWLEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDGEWRHDEHQPFVNDNYGIVNTIFIAREPNLVAPSFSTETPGRSNMDVDDAFVSSEPVTTVSDADLEVSRNRVSAFLSRHTAYELLAESGKVIALDVNIAVKQAFHILYEQGIPVAPLWDSCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKVYLGRQIDGNARSYPRCLVQAGPYDSLKDVALKILKSKVATVPIMHSTSRDGSFQQLLHLGTLSEILKCICRHFKHSASSLPILQQPICSIPLGTWVPNIGEPNGRPLAMLRPNATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDVFRFLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0B0MVY0_GOSAR (Sucrose nonfermenting 4-like protein OS=Gossypium arboreum GN=F383_28645 PE=4 SV=1) HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0 Identity = 398/479 (83.09%), Postives = 433/479 (90.40%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MFAS ++G+ N GVSR LL+PMRF+WPYGGSRVFL GSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVD EWRHDE QPFV G+YGVVNT+FIARE D++ PS SPE P RS+MD+DDV + E PTIS+ADLEVSR R A FLSRHTAYELLP+S KV+ALDV+IAVKQAFHILHEQGIP+APLWDS KGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGKVH+SRQ+DGNARSYPR LV AGP+DSLKDV LKIL VA VPI HS+S DG FPQLL+LATLSE+LKCI RHFKHSSSSLPILQQP+CSIPLGT VPKIGESN + LAMLRP A+LGAALSLL+QA VSSIPIVDENDSLLD+YSRSDITALAKDKAYAQI LDEMS+HQALQL QDAN NGQRCQMCL SDTLHKVMERLA+PGVRRLVIVEAG+KRVEGI+SLSD+FRFLLGV Sbjct: 1 MFASGSETGHENRGVSRPLLVPMRFIWPYGGSRVFLTGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDGEWRHDERQPFVNGNYGVVNTVFIARELDVVSPSLSPEAPSRSHMDVDDVFIRSEPVPTISDADLEVSRQRAATFLSRHTAYELLPDSSKVIALDVNIAVKQAFHILHEQGIPMAPLWDSFKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKVHLSRQIDGNARSYPRCLVHAGPYDSLKDVVLKILRSKVAMVPIIHSASQDGSFPQLLNLATLSEVLKCILRHFKHSSSSLPILQQPVCSIPLGTWVPKIGESNGQLLAMLRPNASLGAALSLLVQANVSSIPIVDENDSLLDVYSRSDITALAKDKAYAQIRLDEMSIHQALQLCQDANSINGQRCQMCLRSDTLHKVMERLASPGVRRLVIVEAGSKRVEGIISLSDVFRFLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0D2R1Q1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G298100 PE=4 SV=1) HSP 1 Score: 811.601 bits (2095), Expect = 0.000e+0 Identity = 394/479 (82.25%), Postives = 431/479 (89.98%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MFAS P++G+ N GVSR LL+PMRF+WPYGGSRVFL GSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVD EWRHD+ QPFV G+YGVVNT+FIARE D++ PS SPE P RS+MD+DDV E PTIS+ADLEVSR R A FLSRHTAYELLP+S KV+ALDV+IAVKQAFHILHEQGIP+APLWDS KGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGKVH+SRQ+DGNA SYPR LV AGP+DSLKDV LK+L VA VPI HS+S DG FPQLL+LATLSE+LKCI RHFKHSSSSLPILQQPICSIPLGT VPKIGE N + LAMLRP A+LGAALSLL+QA+VSSIPIVDENDSL+D+YSRSDITALAKDKAYAQI LDEMS+HQALQL QDAN NGQRCQMCL SDTLHKVMERLA+PGVRRLVIVEAG+KRVEGI+SLSD+FR LLGV Sbjct: 1 MFASGPETGHENRGVSRPLLVPMRFIWPYGGSRVFLTGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDGEWRHDDRQPFVNGNYGVVNTVFIARELDVVSPSVSPEAPSRSHMDVDDVFICSEPVPTISDADLEVSRQRAATFLSRHTAYELLPDSSKVIALDVNIAVKQAFHILHEQGIPMAPLWDSFKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKVHLSRQIDGNASSYPRCLVHAGPYDSLKDVVLKVLRSKVAMVPIIHSASQDGSFPQLLNLATLSEVLKCILRHFKHSSSSLPILQQPICSIPLGTWVPKIGELNGQSLAMLRPNASLGAALSLLVQADVSSIPIVDENDSLVDVYSRSDITALAKDKAYAQIRLDEMSIHQALQLCQDANSINGQRCQMCLRSDTLHKVMERLASPGVRRLVIVEAGSKRVEGIISLSDVFRLLLGV 479
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: A0A0D2S580_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G240500 PE=4 SV=1) HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0 Identity = 389/479 (81.21%), Postives = 414/479 (86.43%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLDDVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLGV 2246 MF S PD+G+GNSGVS LLIPMRFVWPYGG RVFL GSFTRW EHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVD EWRHDEHQPFV +YG+VNTIFIAREP+++ PSF+PETPGRSNMD+DD E PT+S+ADLE SR+R++AFLS HTAYELL ESGKV+ALDV+IAVKQAFHIL+EQ LGN GS+LTEEELETHTISAWKEGKV++ RQ+DGNARSYPR LV AGP+DSLKDVALKIL VATVPI HS+S DG FPQLLHLATLSEILKCICRHFKHS+SSLPILQQPICSIPLGT VP IGE N RPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSD+FRFLLGV Sbjct: 1 MFGSGPDTGHGNSGVSGPLLIPMRFVWPYGGRRVFLSGSFTRWLEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDGEWRHDEHQPFVNDNYGIVNTIFIAREPNLVAPSFNPETPGRSNMDVDDAFVSSEPVPTVSDADLEASRNRVSAFLSGHTAYELLAESGKVIALDVNIAVKQAFHILYEQ------------------------------LGNHGSNLTEEELETHTISAWKEGKVYLGRQIDGNARSYPRCLVQAGPYDSLKDVALKILKSKVATVPIMHSTSQDGSFPQLLHLATLSEILKCICRHFKHSASSLPILQQPICSIPLGTWVPNIGEPNGRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDANFFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDVFRFLLGV 449
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Match: D7U241_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00890 PE=4 SV=1) HSP 1 Score: 777.319 bits (2006), Expect = 0.000e+0 Identity = 381/483 (78.88%), Postives = 423/483 (87.58%), Query Frame = 3 Query: 810 MFASAPDSGNGNSGVSRSLLIPMRFVWPYGGSRVFLCGSFTRWSEHIPMSPMEGCPTVFQVICSLSPGYHQFKFFVDNEWRHDEHQPFVIGDYGVVNTIFIAREPDMLPPSFSPETPGRSNMDLD-DVSSQMEAAPTISNADLEVSRHRIAAFLSRHTAYELLPESGKVVALDVDIAVKQAFHILHEQGIPVAPLWDSCKGQFVGVLSALDFVLILRELGNLGSDLTEEELETHTISAWKEGKVHISRQMDGNARSYPRRLVCAGPHDSLKDVALKILNGNVATVPITHSSSPDGLFPQLLHLATLSEILKCICRHFKHSSSSLPILQQPICSIPLGTRVPKIGESNRRPLAMLRPTATLGAALSLLIQAEVSSIPIVDENDSLLDIYSRSDITALAKDKAYAQIHLDEMSVHQALQLGQDAN----FFNGQRCQMCLGSDTLHKVMERLANPGVRRLVIVEAGTKRVEGIVSLSDIFRFLLG 2243 MF S +SG+ NS + ++LIP RFVWPYGG RV L GSFTRWSEHIPMSP+EGCPTVFQVI SL+PGYHQ+KFFVD EWRHDEHQPFV G+YGVVNTIF+ REPD++P FSP+TPG SNMDLD D + E P IS ADLEVSRHR++ FLS H AYELLPESGKV+ALDV++ VKQAFH L+EQGIPVAPLWD CKGQFVGVLSALDF+LILRELGN GS+LTEEELETHTISAWKEGK+H+ RQ+DG+ R PR LV AGP+DSLKDV LKIL VATVPI HS+S DG FPQLLHLA+LS ILKCICRHF+HSSSSLPILQQPICSIP+GT VPKIGESN +P AMLRP A+LGAALSLL+QAEVSSIPIVD+NDSLLDIYSRSDITALAKD+AYAQIHLD MS+HQALQLGQDAN F +GQRCQMCL SD LHKVMERLANPGVRRLVIVEAG+KRVEG++SLSD+FRFLLG Sbjct: 1 MFVSGAESGHENSAIPGTVLIPTRFVWPYGGRRVLLSGSFTRWSEHIPMSPIEGCPTVFQVIWSLAPGYHQYKFFVDGEWRHDEHQPFVSGNYGVVNTIFLPREPDVVPAVFSPDTPGGSNMDLDNDPFPRGEVIPRISEADLEVSRHRVSEFLSTHIAYELLPESGKVIALDVNLPVKQAFHTLYEQGIPVAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKLHL-RQIDGSGRLCPRHLVHAGPYDSLKDVTLKILQNKVATVPIIHSASQDGSFPQLLHLASLSGILKCICRHFRHSSSSLPILQQPICSIPVGTWVPKIGESNGQPFAMLRPNASLGAALSLLVQAEVSSIPIVDDNDSLLDIYSRSDITALAKDRAYAQIHLDNMSIHQALQLGQDANSPYGFISGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGVISLSDVFRFLLG 482 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094849 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094849 ID=g.barbadense_cottongen_reftransV1_0094849; Name=g.barbadense_cottongen_reftransV1_0094849; organism=Gossypium barbadense; type=contig; length=2623bpback to top |