g.barbadense_cottongen_reftransV1_0094847, g.barbadense_cottongen_reftransV1_0094847 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: BAC1_ARATH (Mitochondrial arginine transporter BAC1 OS=Arabidopsis thaliana GN=BAC1 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.717e-77 Identity = 138/237 (58.23%), Postives = 172/237 (72.57%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++G + PRP++I+PSA F GAIISFVLCP+ELVKCRMQIQGTDSLVP Y+S LDCA++T+K+DGV TG FRGGS T LRE GNAVFF+VYEY+RY++H +L+ LVDMGIG+L+GGLGG+A WS VLP DVAKTIIQT+ +K++ NPF+VL+SI++ +GL+GCY GLGPTI+RAFPANAAAIV WE +MK LGIK + Sbjct: 102 LRGTLPDDGPRPEIIVPSAMFGGAIISFVLCPTELVKCRMQIQGTDSLVPNFRRYNSPLDCAVQTVKNDGV---------------------------TGIFRGGSATLLRECTGNAVFFTVYEYLRYHIHSRLEDSKLKDGYLVDMGIGVLTGGLGGIACWSAVLPFDVAKTIIQTSSEKATERNPFKVLSSIHKRAGLKGCYAGLGPTIVRAFPANAAAIVAWEFSMKMLGIKRD 311 HSP 2 Score: 100.908 bits (250), Expect = 1.567e-21 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3 Query: 2464 YKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2640 YKEYVAG+ AG+ATV VGHPFDTVKVKLQKHNT+VQG+ Y+NG HC +RIL TEGV L Sbjct: 15 YKEYVAGMMAGLATVAVGHPFDTVKVKLQKHNTDVQGLRYKNGLHCASRILQTEGVKGL 73
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.697e-28 Identity = 77/217 (35.48%), Postives = 108/217 (49.77%), Query Frame = -1 Query: 411 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYV-RYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLG 1058 + FAG S VL P ELVKCR+Q+Q T Y SLDC ++ +K G+R GA+RG + T RE +GN FFS YE RY+ + + K D NL + I GG +A+W+ + P+DVAK+ IQ + + +VL IY G++G + G PTI+R+FPANAA +E+ +K LG Sbjct: 104 AGGFAGVGASVVLTPVELVKCRLQVQTTGP-----QKYKGSLDCLVQILKEGGIR---------------------------GAYRGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLPALIISGGLGG---MAYWTVLYPVDVAKSKIQISEGAGPSPSIVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELVIKLLG 285
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.344e-20 Identity = 74/224 (33.04%), Postives = 108/224 (48.21%), Query Frame = -1 Query: 411 SAAFAGAIISFVLCPSELVKCRMQIQG------TDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP--TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLG 1058 + A AG +SF+ CP+EL+KCR+Q QG T S V Y +D A ++S+G G R G F+G TF RE GNA F+ YE + ++ +G SD ++L G I++GG+ G +FW V P DV K+++Q D +P T I + G++G Y G GP + R+ PANAA + +E+ LG Sbjct: 110 AGAGAGFAVSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEG----------------------GAR----GLFKGLFPTFAREVPGNATMFAAYEAFKRFL-----AGGSDTSSL-GQGSLIMAGGVAGASFWGIVYPTDVVKSVLQV-DDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.447e-17 Identity = 64/232 (27.59%), Postives = 105/232 (45.26%), Query Frame = -1 Query: 414 VQSSRPRPQVIIP----SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1097 +Q P ++ P + +G + ++ P E +KC +QIQ + + YS +LDCA K + G+R G ++G T +R+ + ++F YE+++ + KS S + + +++GG G+ W+ +P DV K+ QTAP P VL + R G+ Y G ++RAFPANAA + +EIAMKFL Sbjct: 99 LQQKSPEDELSYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQASSGE----NKYSGTLDCAKKLYQEFGIR---------------------------GFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPEGKSVSD-----LSVPRILVAGGFAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIAMKFL 294
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_RAT (Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.813e-17 Identity = 63/232 (27.16%), Postives = 105/232 (45.26%), Query Frame = -1 Query: 414 VQSSRPRPQVIIP----SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1097 +Q P ++ P + +G + ++ P E +KC +QIQ + + YS +LDCA K + G+R G ++G + T +R+ + ++F YE+++ +L G S H+ + + +++GG G+ W +P DV K+ QTAP P VL + R G+ Y G ++RAFPANAA + +EI MK L Sbjct: 99 LQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQASSG----KNKYSGTLDCAKKLYQEFGIR---------------------------GFYKGTALTLMRDVPASGMYFMTYEWLK---NLFTPQGKSVHD--LSVPRVLVAGGFRGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIPMKIL 294
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-16 Identity = 68/225 (30.22%), Postives = 97/225 (43.11%), Query Frame = -1 Query: 399 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSG--YSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEI---AMKFLGIKNN 1058 + A AG + V+ P E +KC +Q+Q S SG Y LD K K G+ + +RG T LR+ +A + SVYEY L+ K + G +++GGL G+A W +P DV K+ +QTAP+ P VL + R G R + G P +LRAFPANAA E+ A ++ GI + Sbjct: 110 AGALAGVFTTIVMVPGERIKCLLQVQQAGS---AGSGVHYDGPLDVVKKLYKQGGISSI---------------------------YRGTGATLLRDIPASAAYLSVYEY------LKKKFSGEGAQRTLSPGATLMAGGLAGIANWGVCIPADVLKSRLQTAPEGKYPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGLELTLAAFRYFGIGGH 298
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.526e-16 Identity = 61/221 (27.60%), Postives = 101/221 (45.70%), Query Frame = -1 Query: 414 PQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1076 PQ + + +G + ++ P E +KC +QIQ + S Y+ +LDCA K + G+R G ++G T +R+ + ++F YE+++ + K S + +++GG+ G+ W+ +P DV K+ QTAP P VL + R G+ Y G ++RAFPANAA + +E+AMKFL Sbjct: 111 PQ-LFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGE----SKYTGTLDCAKKLYQEFGIR---------------------------GIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSE-----LSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFD_DICDI (Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum GN=mcfD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16 Identity = 67/229 (29.26%), Postives = 108/229 (47.16%), Query Frame = -1 Query: 402 IISFVLCPSELVKCRMQIQ----GTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLK-----------SGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP--TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKN 1037 +IS ++ P +LVK ++Q+Q G+ ++ + Y +D +TIK DG++ G F+G +TF R+ G+AV+F VYE+++ + K + +S V + I +GG G++FW ++ P+DV KT IQT PD P T+ Q + IYR G+ + G TILRAFP +A + +E L K+ Sbjct: 134 VISLLITPRDLVKSKLQVQCRPFGSTNVSLQ---YKGPIDVIRQTIKRDGIK---------------------------GMFKGIRSTFCRDIPGDAVYFVVYEFMKRKLLALSKNNNNNNNNNDNNDNSSPKAGVPAWVAIGAGGCAGMSFWMSIYPMDVVKTRIQTQPDHLPPQYTSVLQTITKIYREEGISVFFRGFSATILRAFPTSAVNFLMYETTRNLLNSKD 332
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.043e-16 Identity = 71/221 (32.13%), Postives = 98/221 (44.34%), Query Frame = -1 Query: 414 IIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP---TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1067 I+ S A G I+SFV CP E VK ++Q+Q T + Y+ +DC IK G+R Y+ + T F R S+ +F YE + Y L+ + GS + MG ++GG+ G FW T P DV ++ I T P SP IYR+ GL+G + G P +LR FPAN A V +E MKF Sbjct: 108 IMVSGAITGWIVSFVACPIETVKSKLQVQYTGVKL-----YNGPIDC----IKKIGIRGL-------------------YKALI-------PTGFQRNSL--YAYFGCYELAQRY--LRREDGS------MTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTMPYNESPPRYKGMIDCAKHIYRVDGLKGFWKGFSPCLLRTFPANGATFVAYECVMKFF 283
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.852e-15 Identity = 58/215 (26.98%), Postives = 98/215 (45.58%), Query Frame = -1 Query: 414 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1058 + +G + ++ P E +KC +QIQ + + Y+ +LDCA K + G+R G ++G T +R+ + ++F YE+V+ + K S + + +++GG+ G+ W+ +P DV K+ QTAP P VL + G+ Y G ++RAFPANAA + +E+AMKFL Sbjct: 116 AGMLSGIFTTGIMTPGERIKCLLQIQASSGE----TKYTGTLDCAKKLYQEFGIR---------------------------GIYKGTVVTLMRDVPASGMYFMTYEWVKNIFTPEGKRVSE-----LSVPRVLVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIPDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: M5X1F7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009183mg PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 5.254e-91 Identity = 158/237 (66.67%), Postives = 182/237 (76.79%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++G Q + P+ QVIIPSAA++GAIISF+LCPSELVKCRMQ+QGTDSLVP Y SSLDCALKT+K+DGVR G FRGG TT LRESIGNAVFFS+YE+VRY+MHL LKS S DH NL+D+G+GI SGGLGG+AFWS VLPLDVAKTIIQTAPD SS NPFQVL+SIYR +GL+GCY GLGPTI+RAFPANA AIV WE+A+K LGIK + Sbjct: 94 LQGSAQGAGPQLQVIIPSAAYSGAIISFILCPSELVKCRMQVQGTDSLVPMSRRYDSSLDCALKTVKNDGVR---------------------------GIFRGGFTTLLRESIGNAVFFSIYEHVRYHMHLHLKSASPDHRNLIDVGVGIASGGLGGIAFWSAVLPLDVAKTIIQTAPDNSSSRNPFQVLSSIYRRAGLKGCYVGLGPTIVRAFPANATAIVAWEVAVKLLGIKRD 303 HSP 2 Score: 107.842 bits (268), Expect = 6.803e-22 Identity = 51/68 (75.00%), Postives = 55/68 (80.88%), Query Frame = -3 Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667 M DS SGYKEYVAGL AGVATV +GHPFDT+KVK+QKHNT GITYRN FHCTARIL TEG+ L Sbjct: 1 MADS---SGYKEYVAGLLAGVATVAIGHPFDTIKVKMQKHNTVAHGITYRNSFHCTARILKTEGIKGL 65
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: D7TJC0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00060 PE=3 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.072e-90 Identity = 169/237 (71.31%), Postives = 192/237 (81.01%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++ G+Q++RP+PQVIIPSAA++GAIISFVLCPSEL+KCRMQIQGTDSLVPK S YSS LDCALKT+K++GV TG FRGG TT LRES GNAVFFSVYEYVRYYMHLQLK+ SSDHN+L+D+GIGI++GGLGGVAFWS VLPLDVAKTIIQTA DKSS NPF++LNSIYR +GLRGCYTGLGPTI RAFPANAAAIVTWE+A+K LGIK Sbjct: 94 MQEGLQNTRPQPQVIIPSAAYSGAIISFVLCPSELLKCRMQIQGTDSLVPKSSRYSSPLDCALKTMKTEGV---------------------------TGIFRGGLTTLLRESFGNAVFFSVYEYVRYYMHLQLKAASSDHNDLIDVGIGIVTGGLGGVAFWSAVLPLDVAKTIIQTASDKSSTKNPFRILNSIYRRAGLRGCYTGLGPTIARAFPANAAAIVTWELAIKLLGIKRE 303 HSP 2 Score: 101.679 bits (252), Expect = 7.614e-20 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = -3 Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667 ME++ SGYKEYVAGL AGVATV +GHPFDTVKVKLQKHNT G+ Y+NG HCTARI+ +EGV L Sbjct: 1 MEET---SGYKEYVAGLLAGVATVGIGHPFDTVKVKLQKHNTEAHGMKYKNGLHCTARIVKSEGVKGL 65
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: I1KLM9_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 5.094e-90 Identity = 159/239 (66.53%), Postives = 187/239 (78.24%), Query Frame = -1 Query: 399 VPIKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1115 V ++GGVQS PRPQVIIPSAA++GAIISFVL P+EL+KCRMQIQGTDSLVPK S Y+S LDCALKT+K++GV+ G FRGG T LRESIGNAVFFSVYEYVRYYMH +K+ SSD+ NLVD+GIGI+SGGLGGVAFW TVLPLDVAKT+IQT PDK+ P NPF+VL+SIY+ +G +GCYTGLGPT+ RAFPANAA IV WE+A+K LGIK++ Sbjct: 94 VYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYNSPLDCALKTVKTEGVK---------------------------GIFRGGCATLLRESIGNAVFFSVYEYVRYYMHSNIKAASSDYTNLVDIGIGIVSGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSIYQRAGFKGCYTGLGPTVSRAFPANAATIVAWELALKMLGIKHD 305 HSP 2 Score: 96.2857 bits (238), Expect = 4.132e-18 Identity = 44/61 (72.13%), Postives = 47/61 (77.05%), Query Frame = -3 Query: 2464 SGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2646 SGYKEY AGLFAGVA V GHPFDTVKV LQKHN I Y+NG+HCTARIL TEG+ L Sbjct: 7 SGYKEYAAGLFAGVAAVATGHPFDTVKVMLQKHNAEAHKIQYKNGWHCTARILKTEGIKGL 67
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: K7M0C6_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 2.388e-89 Identity = 158/239 (66.11%), Postives = 184/239 (76.99%), Query Frame = -1 Query: 399 VPIKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1115 V ++GGVQS PRPQVIIPSAAF+GAIISFVL P++L+KCRMQIQGTDSLVPK S YSS LDCALKT+K++GV+ G FRGG T LRESIGNAVFFSVYEYVRY+MH +K+ SS+H NLVD+G+GI SGGLGGVAFW TVLPLDVAKT+IQT PDK+ P NPF VL+SIY+ +GL+GCYTGLG T+ RAFPANAA IV WE+A+K LGIK + Sbjct: 17 VYLQGGVQSGEPRPQVIIPSAAFSGAIISFVLGPTDLIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKAEGVK---------------------------GIFRGGCATLLRESIGNAVFFSVYEYVRYHMHSNIKANSSNHRNLVDIGVGIASGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFGVLSSIYQRAGLKGCYTGLGATVSRAFPANAATIVAWELALKMLGIKRD 228
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: W9RYW5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014487 PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.898e-89 Identity = 157/234 (67.09%), Postives = 184/234 (78.63%), Query Frame = -1 Query: 408 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGI 1109 ++G +QSSRP+PQVIIPSAA+ GAIISF+LCPSELVKCRMQ+QGTDS VP S YS LDCA+KT+KS+GV+ G F GG T LRES+GNAVFFSVYEY RY+MH QLKS SSD +NLVD+G+GI+SGGLGG+AFWS VLPLDVAKTIIQTAPDK+S NPF++LNSIY+ G++GCYTGLGPTILRAFPANAAAIVTWE+A+K LG+ Sbjct: 94 LQGSLQSSRPQPQVIIPSAAYGGAIISFILCPSELVKCRMQVQGTDSTVPLSSRYSGPLDCAVKTVKSEGVK---------------------------GIFCGGFATLLRESLGNAVFFSVYEYTRYHMHSQLKSASSDRSNLVDVGVGIMSGGLGGIAFWSVVLPLDVAKTIIQTAPDKNSLRNPFRILNSIYKRDGIKGCYTGLGPTILRAFPANAAAIVTWELAIKLLGL 300 HSP 2 Score: 98.5969 bits (244), Expect = 7.870e-19 Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = -3 Query: 2464 YKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2640 YKEYVAGL AGVATV GHPFDTVKVKLQKHNT GI YR+ HCTARIL+TEG+ L Sbjct: 7 YKEYVAGLLAGVATVATGHPFDTVKVKLQKHNTEAHGIKYRSALHCTARILSTEGIRGL 65
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: K7M0C5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 7.885e-89 Identity = 158/239 (66.11%), Postives = 184/239 (76.99%), Query Frame = -1 Query: 399 VPIKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1115 V ++GGVQS PRPQVIIPSAAF+GAIISFVL P++L+KCRMQIQGTDSLVPK S YSS LDCALKT+K++GV+ G FRGG T LRESIGNAVFFSVYEYVRY+MH +K+ SS+H NLVD+G+GI SGGLGGVAFW TVLPLDVAKT+IQT PDK+ P NPF VL+SIY+ +GL+GCYTGLG T+ RAFPANAA IV WE+A+K LGIK + Sbjct: 94 VYLQGGVQSGEPRPQVIIPSAAFSGAIISFVLGPTDLIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKAEGVK---------------------------GIFRGGCATLLRESIGNAVFFSVYEYVRYHMHSNIKANSSNHRNLVDIGVGIASGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFGVLSSIYQRAGLKGCYTGLGATVSRAFPANAATIVAWELALKMLGIKRD 305 HSP 2 Score: 95.1301 bits (235), Expect = 1.201e-17 Identity = 45/61 (73.77%), Postives = 46/61 (75.41%), Query Frame = -3 Query: 2464 SGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2646 SGYKEYVAGL AGVA V GHPFDTVKV LQKHN I YRNG HCTARIL TEG+ L Sbjct: 7 SGYKEYVAGLSAGVAVVATGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGL 67
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A059C7W4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03259 PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 1.319e-87 Identity = 155/239 (64.85%), Postives = 185/239 (77.41%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQL--KSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++ G+Q+ P+P+VIIP+AA+ GAIISFVLCPSELVKCRMQ+QGTDS VPK S YS LDCA+KT+K++GV TG FRGG TT LRESIGNA FFS YEYVR+YMHLQL S SS H +LVD+GIGI++GGLGGVAFWS VLPLDVAKTIIQTAPD+ +P NPF+VL+SIY+ +GLRGCY G GPT++RAFPANAAAIVTWE+AMK LGI+++ Sbjct: 94 LQRGLQTDLPQPKVIIPAAAYGGAIISFVLCPSELVKCRMQVQGTDSAVPKSSRYSGPLDCAIKTVKAEGV---------------------------TGIFRGGFTTLLRESIGNAFFFSTYEYVRHYMHLQLHRNSDSSQHRHLVDIGIGIVTGGLGGVAFWSAVLPLDVAKTIIQTAPDRDAPRNPFRVLSSIYKRAGLRGCYAGFGPTLVRAFPANAAAIVTWELAMKVLGIRHD 305 HSP 2 Score: 104.375 bits (259), Expect = 1.074e-20 Identity = 49/61 (80.33%), Postives = 51/61 (83.61%), Query Frame = -3 Query: 2464 SGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2646 SGYKEYVAGL AGVATV+ GHPFDTVKVKLQKHNT V GI YRNG HC AR+L TEGV L Sbjct: 5 SGYKEYVAGLVAGVATVITGHPFDTVKVKLQKHNTEVGGIKYRNGLHCAARVLQTEGVRGL 65 HSP 3 Score: 65.0846 bits (157), Expect = 6.874e-8 Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = -3 Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365 VRGLY GAT SFVGMAFESSLLFGIYSQTKQSLQ Sbjct: 62 VRGLYRGATSSFVGMAFESSLLFGIYSQTKQSLQ 95
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A067JB05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21462 PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 1.836e-86 Identity = 164/246 (66.67%), Postives = 189/246 (76.83%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVK---------CRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++ GV S P PQVIIPSAA++GAIISFVLCPSEL+K CRMQ+QGT SLVPK S YS LDCAL+T+KS+GV +G FRGGSTT LRES+GNAVFFSVYE+VRYYMHL+LKS S++NNL+DMG+GI+SGGLGGVAFWS VLPLDVAKTIIQT+PDKSS NPFQVLNSIYR +GL+GCY GLGPTI+RAFPANAAAIVTWE+AMK LGI+ + Sbjct: 94 LQEGVHSDMPVPQVIIPSAAYSGAIISFVLCPSELLKHSYEIKFLQCRMQVQGTGSLVPKLSRYSGPLDCALQTVKSEGV---------------------------SGLFRGGSTTLLRESLGNAVFFSVYEHVRYYMHLELKSSVSENNNLIDMGVGIVSGGLGGVAFWSAVLPLDVAKTIIQTSPDKSSTRNPFQVLNSIYRRAGLKGCYAGLGPTIVRAFPANAAAIVTWELAMKMLGIRRD 312 HSP 2 Score: 256.529 bits (654), Expect = 2.327e-69 Identity = 143/237 (60.34%), Postives = 170/237 (71.73%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++GGV S P PQ S+ + + ++CRMQ+QGT SLVPK S YS LDCAL+T+KS+GV +G FRGGST LRES+G AVFFSVYE+VRYYMHL+LKS S++NNL+DMG+GI+SGGLGGVAFWS VLPLDVAKTIIQT+PDKSS NPFQVLNSIYR +GL+GCY GLGPTI+RAFPANAAAIVTWE+AMK LGI+ + Sbjct: 542 LQGGVHSDMPVPQH------------SYEI---KFLQCRMQVQGTGSLVPKLSRYSGPLDCALQTVKSEGV---------------------------SGLFRGGSTMLLRESLGYAVFFSVYEHVRYYMHLELKSSVSENNNLIDMGVGIVSGGLGGVAFWSAVLPLDVAKTIIQTSPDKSSTRNPFQVLNSIYRRAGLKGCYAGLGPTIVRAFPANAAAIVTWELAMKMLGIRRD 736 HSP 3 Score: 102.834 bits (255), Expect = 4.709e-19 Identity = 49/68 (72.06%), Postives = 53/68 (77.94%), Query Frame = -3 Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667 MED+ YKEY+AGL AGVATV+ GHPFDTVKVKLQKHNT GI YRNG HCTARI+ TEGV L Sbjct: 1 MEDT---VAYKEYLAGLIAGVATVITGHPFDTVKVKLQKHNTEAHGIKYRNGLHCTARIIKTEGVKGL 65 HSP 4 Score: 83.5741 bits (205), Expect = 4.097e-13 Identity = 38/48 (79.17%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 2464 VATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2607 VATV+ GHPFDTVKVKLQKHNT GI YRNG HCTARIL TEGV L Sbjct: 466 VATVITGHPFDTVKVKLQKHNTEAHGIKYRNGLHCTARILKTEGVKGL 513 HSP 5 Score: 63.5438 bits (153), Expect = 6.248e-7 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -3 Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365 V+GLY GAT SFVGMAFESSLLFGIYSQTKQSLQ Sbjct: 62 VKGLYRGATSSFVGMAFESSLLFGIYSQTKQSLQ 95
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: V7CQY5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G230400g PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.782e-85 Identity = 153/239 (64.02%), Postives = 180/239 (75.31%), Query Frame = -1 Query: 399 VPIKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1115 V ++GGVQS PRPQVIIPSAA++GAIISFVL P+EL+KCRMQIQGTDSLVPK S YS LDCALKT++++GV+ G FRGG TT LRESIGN VFF VYEYVRY MH +K SS+++NL D+G+GI SGGLGGVAFW TVLPLDVAKT+IQT PDK+ NPF+VL+SIY+ +GL+GCY GLGPTI RAFPANAA IV WE+A+K LGIK + Sbjct: 94 VYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPAELIKCRMQIQGTDSLVPKSSRYSGPLDCALKTVETEGVK---------------------------GIFRGGCTTLLRESIGNGVFFGVYEYVRYQMHSNIKVSSSNYSNLADIGVGIASGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCARNPFRVLSSIYQRAGLKGCYAGLGPTISRAFPANAATIVAWELALKMLGIKRD 305 HSP 2 Score: 99.7525 bits (247), Expect = 3.325e-19 Identity = 48/68 (70.59%), Postives = 52/68 (76.47%), Query Frame = -3 Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667 ME+ + SGYKEYVAGL AGVATV +GHPFDTVKV LQKHN I YRNG HCTARIL TEG+ L Sbjct: 1 MEEISR-SGYKEYVAGLLAGVATVAIGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGL 67
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: I3SAP7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 3.548e-85 Identity = 148/237 (62.45%), Postives = 183/237 (77.22%), Query Frame = -1 Query: 399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109 ++GGVQS PRPQVIIP+AAF+GAI SFVLCP+EL+KCRMQIQGTDSLVP S YSS LDCALKT+K++GV TG FRGG T LRES+GNA FFSVYEY+RY++H ++K SSD++ L+D+GIGI++GG+ G+AFW VLPLDVAKT+IQT PDK+S NPF +L+SIY+ +GL+GCYTGLGPT+ RAFPANAA IVTWE+A+K LGIK++ Sbjct: 47 LQGGVQSGEPRPQVIIPAAAFSGAINSFVLCPTELLKCRMQIQGTDSLVPMSSRYSSPLDCALKTVKNEGV---------------------------TGIFRGGCATLLRESMGNATFFSVYEYMRYHLHSRIKPASSDYSGLIDIGIGIVTGGVSGIAFWLAVLPLDVAKTLIQTNPDKNSQRNPFVILSSIYKRAGLKGCYTGLGPTLSRAFPANAATIVTWELALKMLGIKHD 256 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094847 ID=g.barbadense_cottongen_reftransV1_0094847; Name=g.barbadense_cottongen_reftransV1_0094847; organism=Gossypium barbadense; type=contig; length=2849bpback to top |