g.barbadense_cottongen_reftransV1_0094779, g.barbadense_cottongen_reftransV1_0094779 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: APRR2_ARATH (Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2) HSP 1 Score: 56.225 bits (134), Expect = 9.875e-7 Identity = 33/104 (31.73%), Postives = 47/104 (45.19%), Query Frame = 1 Query: 277 KPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQH 588 + +V W+ ELH++FV AV QLG++ +A+P +ILELM V LTR NVASHLQK+R + + + H Sbjct: 296 RKKVDWTPELHKKFVQAVEQLGVD---------------------------------------QAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDH 360
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2T4M5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G259700 PE=4 SV=1) HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0 Identity = 539/590 (91.36%), Postives = 543/590 (92.03%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHV+NNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSP GQ MLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSM NFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSS+ SNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVK ERVAD APANLYPDHFG+EDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV Sbjct: 122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVNNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPRGQSMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMFNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSRPSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKFERVADAAPANLYPDHFGQEDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 672
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MGP4_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_21162 PE=4 SV=1) HSP 1 Score: 1047.34 bits (2707), Expect = 0.000e+0 Identity = 534/591 (90.36%), Postives = 544/591 (92.05%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPL+DQRNIFSFENPKLRFGEAQQ HV+NNKQ NLLHGIPTTMEPKQL+GLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFN+SQHSNSLQGNLDHTQS+LVQQGF +GQNRNSTVISKAMFSAGDSTGHVNAQN NQHLNSL +DNTVRVKSERVAD APANLYPDHFG+EDLMSALLKQQD+IAPAENNDFDFDGYSIDNIPV Sbjct: 122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLVDQRNIFSFENPKLRFGEAQQ-HVNNNKQMNLLHGIPTTMEPKQLSGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNTSQHSNSLQGNLDHTQSVLVQQGFSTGQNRNSTVISKAMFSAGDSTGHVNAQNGNQHLNSLFVDNTVRVKSERVADAAPANLYPDHFGQEDLMSALLKQQDVIAPAENNDFDFDGYSIDNIPV 672
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061EWK1_THECC (Sensor histidine kinase, putative isoform 1 OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1) HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0 Identity = 469/601 (78.04%), Postives = 508/601 (84.53%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD QSILVQQGF ++GQNR++ V+SKAMFSAGD T NAQN N HLN+LL DNT+R+KSERVAD PANL+PDHFG+EDLMSALLKQQD IAPAE N+FDFDGYS+DNIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQQDGIAPAE-NEFDFDGYSMDNIPV 681
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061ENM9_THECC (Sensor histidine kinase, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1) HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0 Identity = 449/577 (77.82%), Postives = 486/577 (84.23%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQ 1698 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD QSILVQQGF ++GQNR++ V+SKAMFSAGD T NAQN N HLN+LL DNT+R+KSERVAD PANL+PDHFG+EDLMSALLKQ Sbjct: 34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQ 571
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0M7N9_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_10199 PE=4 SV=1) HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0 Identity = 431/602 (71.59%), Postives = 474/602 (78.74%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSED DYSSS NEGNWKSSK+RKDDEDE D+RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H NLNNSFMNPQD TFGPL DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPT ME KQL L HT+QS+GN+NM V HG+QSSQNN L++M QP +R Q+LNDSTV L+ +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP ++F L STPG+S K AF ED NSEIKGS GF+PSYD+FND Q+K QNWELQN GM+ + SQHSNSLQGNLD TQS+LVQQGF ++GQNR+ ++SKAMFSAGDST N N N HLN++ DNTVRVKSE VAD P+NL+ DHFG+EDLM ALLKQQ IAP E N+FDFDGYS+DNIPV Sbjct: 124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDTDYSSSVNEGNWKSSKKRKDDEDETDDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNLNNSFMNPQDETFGPLSSVHGFDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTAMESKQLTSLRHTSQSIGNLNMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDTFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPSYDVFNDY-QYKSQNWELQNAGMILDDSQHSNSLQGNLDLTQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRADNTVRVKSESVADGNPSNLFTDHFGQEDLMIALLKQQQGIAPVE-NEFDFDGYSLDNIPV 678
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MT30_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_24767 PE=4 SV=1) HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0 Identity = 435/603 (72.14%), Postives = 485/603 (80.43%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLL--MQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SK+RKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTMEPKQL L H AQS+GNMNM V HG+Q+SQNNPLL M Q Q+RGQ+L DST+ APRL S MGQP+LSNG+ATNVS+RNG+PENIRAP Y SQT SMLNFP+NH SELPGNSF L STPG+S L K AFQEDVNSEIKGS G MPSYD+FNDLNQHKPQ+WELQNVGM F++SQHSNSLQGNLD TQS L QQGF SGQ NR++ V +KAMFS GD +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKKRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEPKQLVSLRHAAQSIGNMNMQVPPHGAQNSQNNPLLMQMGQQQQQSRGQILVDSTINHAPRLSSSMGQPILSNGIATNVSSRNGIPENIRAPGY---SQTPSMLNFPVNHASELPGNSFALGSTPGVSILTSKGAFQEDVNSEIKGSGGLMPSYDVFNDLNQHKPQSWELQNVGMAFDTSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVANKAMFSTGDVKELGSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2UVE1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1) HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0 Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL L H AQS+GNMNM V G QSSQNNPLLMQM Q Q + Q +L DST+ APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y SQT SMLNFPMNH SELPGN FPL STPG+S+L K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ NR++ V SKA+FS GD +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 680
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2NHH8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G029200 PE=4 SV=1) HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0 Identity = 427/602 (70.93%), Postives = 472/602 (78.41%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSS NEGNWKSSK+RKDDEDE ++RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H N NNSFMNPQD TFGPL DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPTTME KQL L T+QS+GN++M V HG+QSSQNN L++M QP +R Q+LNDSTV L+ +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP +SF L STPG+S K AF ED NSEIKGS GF+P+YD+FND Q+K QNWELQN GM+ SQHSNSLQGNLD QS+LVQQGF ++GQNR+ ++SKAMFSAGDST N N N HLN++ +NTVRVKS VAD P+NL+ DHFG+EDLM ALLKQQ IAPAE N+FDFDGYS+DNIPV Sbjct: 124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSVNEGNWKSSKKRKDDEDETEDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNPNNSFMNPQDETFGPLSSVHGLDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTTMESKQLTSLRRTSQSIGNVSMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDSFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPTYDVFNDY-QYKSQNWELQNAGMILEDSQHSNSLQGNLDLAQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRAENTVRVKSGSVADGNPSNLFADHFGQEDLMIALLKQQQGIAPAE-NEFDFDGYSLDNIPV 678
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2RQ03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1) HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0 Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL L H AQS+GNMNM V G QSSQNNPLLMQM Q Q + Q +L DST+ APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y SQT SMLNFPMNH SELPGN FPL STPG+S+L K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ NR++ V SKA+FS GD +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV Sbjct: 34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 593
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2TAL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1) HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0 Identity = 437/605 (72.23%), Postives = 483/605 (79.83%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI++ VPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL L H AQS+GNMNM V G QSSQNNPLLMQM Q Q + Q +L DST+ APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y SQT SMLNFPMNH SELPGN FPL STPG+S+L K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ NR++ V SKA+FS GD +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDT----------------------------------------VPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 21
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BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094779 ID=g.barbadense_cottongen_reftransV1_0094779; Name=g.barbadense_cottongen_reftransV1_0094779; organism=Gossypium barbadense; type=contig; length=2440bpback to top |