g.barbadense_cottongen_reftransV1_0094779, g.barbadense_cottongen_reftransV1_0094779 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094779
Unique Nameg.barbadense_cottongen_reftransV1_0094779
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2440
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At09chromosomeg.barbadense_cottongen_reftransV1_0094779:28..2440 .
At09:77631613..77634200 -
Homology
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: PCL1_ARATH (Transcription factor LUX OS=Arabidopsis thaliana GN=LUX PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.399e-16
Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  268 TLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVS 582
            TLK+PR+VW+ +LH++FV  V  LGI++                                       AVPK I++LMNV GLTRENVASHLQKYRLYL+R+ G++
Sbjct:  141 TLKRPRLVWTPQLHKRFVDVVAHLGIKN---------------------------------------AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLT 206
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: PCLL_ARATH (Transcription factor BOA OS=Arabidopsis thaliana GN=BOA PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.506e-15
Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = 1 
Query:  268 TLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVS 582
            T K+PR+VW+ +LH++FV  V  LGI++                                       AVPK I++LMNV GLTRENVASHLQKYRLYL+R+ G++
Sbjct:  138 TSKRPRLVWTPQLHKRFVDVVAHLGIKN---------------------------------------AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT 203
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR19_ARATH (Putative two-component response regulator ARR19 OS=Arabidopsis thaliana GN=ARR19 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.041e-13
Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKR------------KNEWKDLEQSGSVEEGDRQPKQSEDADY--SSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQL-GIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILEL---MNVPGLTRENVASHLQKYRLYLRR 567
            MK   +GACDY++KPV+ E + NIWQH+VRKR            +  W ++ Q     +    P    D D+  S + N GN   +  +K  +            +KPR+ W+ ELHQ+F+ A+  + GIE                                       +A PK ++E    M + G+TR NVASHLQK+R+ L  
Sbjct:  122 MKATFYGACDYVVKPVKEEVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQP---VQSHLVPTDGLDRDHFDSITINGGNGIQNMEKKQGKKP----------RKPRMTWTEELHQKFLEAIEIIGGIE---------------------------------------KANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEE 276
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: APRR4_ARATH (Putative two-component response regulator-like APRR4 OS=Arabidopsis thaliana GN=APRR4 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.731e-13
Identity = 66/208 (31.73%), Postives = 93/208 (44.71%), Query Frame = 1 
Query:    4 KGVTHGACDYLIKPVRIEALKNIWQHVVRKRKN---------EWKDLEQSGSVEEGD---RQPKQSEDAD-YSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQH 588
            K + +GA DYLIKP+R E L+ +++H+V+K +          E    E+S SV  GD   R P +S+ +    +  NE +              ++R   S+ KK RVVW  ELHQ F+ AV+ LG+E                                        AVPKKIL++M V  ++RENVASHLQ   L    +    QH
Sbjct:  131 KWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTGEAEKAAGEKSSSV--GDSTIRNPNKSKRSSCLEAEVNEEDRHDH----------NDRACASSAKKRRVVWDEELHQNFLNAVDFLGLE---------------------------------------RAVPKKILDVMKVDYISRENVASHLQVTFLIYNIIVHFQQH 287
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: PCL1_ORYSJ (Transcription factor PCL1 OS=Oryza sativa subsp. japonica GN=PCL1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.555e-13
Identity = 44/121 (36.36%), Postives = 60/121 (49.59%), Query Frame = 1 
Query:  274 KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATF 636
            K+ R+VW+ +LH++FV  V  LG+++                                       AVPK I++LMNV GLTRENVASHLQKYRLY++R+ G       L+N   +P D  F
Sbjct:  117 KRARLVWTPQLHKRFVEVVAHLGMKN---------------------------------------AVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQG-------LSNEGPSPSDHIF 191
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: GLK2_ARATH (Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.607e-10
Identity = 38/99 (38.38%), Postives = 49/99 (49.49%), Query Frame = 1 
Query:  274 KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            KKP+V W+ ELH++FV AV QLG++                                       +AVP +ILE+MNV  LTR NVASHLQKYR + + L
Sbjct:  146 KKPKVDWTPELHRKFVQAVEQLGVD---------------------------------------KAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR21_ARATH (Putative two-component response regulator ARR21 OS=Arabidopsis thaliana GN=ARR21 PE=2 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 1.246e-9
Identity = 35/100 (35.00%), Postives = 48/100 (48.00%), Query Frame = 1 
Query:  274 KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLC 573
            KK ++ W+  LH  F+ A+  +G++                                       +AVPKKIL  M+VP LTRENVASHLQKYR++LRR+ 
Sbjct:  221 KKKKIQWTDSLHDLFLQAIRHIGLD---------------------------------------KAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVA 281
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR13_ARATH (Putative two-component response regulator ARR13 OS=Arabidopsis thaliana GN=ARR13 PE=3 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 2.273e-8
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:  466 EAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLC 573
            + VPKKIL +MNVP LTRENVASHLQKYRL+++R+ 
Sbjct:  249 KVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRVV 284
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: GLK1_ARATH (Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 5.011e-8
Identity = 36/99 (36.36%), Postives = 47/99 (47.47%), Query Frame = 1 
Query:  274 KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            +K +V W+ ELH++FV AV QLG++                                       +AVP +ILELM V  LTR NVASHLQKYR + + L
Sbjct:  152 RKVKVDWTPELHRRFVEAVEQLGVD---------------------------------------KAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 211
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: GLK2_ORYSJ (Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica GN=GLK2 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.054e-7
Identity = 35/99 (35.35%), Postives = 47/99 (47.47%), Query Frame = 1 
Query:  274 KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            +K +V W+ ELH++FV AV QLGI+                                       +AVP +ILELM +  LTR N+ASHLQKYR + + L
Sbjct:  214 RKVKVDWTPELHRRFVQAVEQLGID---------------------------------------KAVPSRILELMGIECLTRHNIASHLQKYRSHRKHL 273
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2T4M5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G259700 PE=4 SV=1)

HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0
Identity = 539/590 (91.36%), Postives = 543/590 (92.03%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHV+NNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSP GQ MLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSM NFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSS+ SNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVK ERVAD APANLYPDHFG+EDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV
Sbjct:  122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVNNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPRGQSMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMFNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSRPSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKFERVADAAPANLYPDHFGQEDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 672
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MGP4_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_21162 PE=4 SV=1)

HSP 1 Score: 1047.34 bits (2707), Expect = 0.000e+0
Identity = 534/591 (90.36%), Postives = 544/591 (92.05%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPL+DQRNIFSFENPKLRFGEAQQ HV+NNKQ NLLHGIPTTMEPKQL+GLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFN+SQHSNSLQGNLDHTQS+LVQQGF +GQNRNSTVISKAMFSAGDSTGHVNAQN NQHLNSL +DNTVRVKSERVAD APANLYPDHFG+EDLMSALLKQQD+IAPAENNDFDFDGYSIDNIPV
Sbjct:  122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLVDQRNIFSFENPKLRFGEAQQ-HVNNNKQMNLLHGIPTTMEPKQLSGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNTSQHSNSLQGNLDHTQSVLVQQGFSTGQNRNSTVISKAMFSAGDSTGHVNAQNGNQHLNSLFVDNTVRVKSERVADAAPANLYPDHFGQEDLMSALLKQQDVIAPAENNDFDFDGYSIDNIPV 672
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061EWK1_THECC (Sensor histidine kinase, putative isoform 1 OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1)

HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 469/601 (78.04%), Postives = 508/601 (84.53%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL      DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST   APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL  K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD  QSILVQQGF    ++GQNR++ V+SKAMFSAGD T   NAQN N HLN+LL DNT+R+KSERVAD  PANL+PDHFG+EDLMSALLKQQD IAPAE N+FDFDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQQDGIAPAE-NEFDFDGYSMDNIPV 681
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061ENM9_THECC (Sensor histidine kinase, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1)

HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0
Identity = 449/577 (77.82%), Postives = 486/577 (84.23%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQ 1698
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL      DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST   APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL  K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD  QSILVQQGF    ++GQNR++ V+SKAMFSAGD T   NAQN N HLN+LL DNT+R+KSERVAD  PANL+PDHFG+EDLMSALLKQ
Sbjct:   34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQ 571
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0M7N9_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_10199 PE=4 SV=1)

HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0
Identity = 431/602 (71.59%), Postives = 474/602 (78.74%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSED DYSSS NEGNWKSSK+RKDDEDE D+RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H  NLNNSFMNPQD TFGPL      DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPT ME KQL  L HT+QS+GN+NM V  HG+QSSQNN  L++M QP +R Q+LNDSTV L+      +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP ++F L STPG+S    K AF ED NSEIKGS GF+PSYD+FND  Q+K QNWELQN GM+ + SQHSNSLQGNLD TQS+LVQQGF    ++GQNR+  ++SKAMFSAGDST   N  N N HLN++  DNTVRVKSE VAD  P+NL+ DHFG+EDLM ALLKQQ  IAP E N+FDFDGYS+DNIPV
Sbjct:  124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDTDYSSSVNEGNWKSSKKRKDDEDETDDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNLNNSFMNPQDETFGPLSSVHGFDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTAMESKQLTSLRHTSQSIGNLNMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDTFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPSYDVFNDY-QYKSQNWELQNAGMILDDSQHSNSLQGNLDLTQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRADNTVRVKSESVADGNPSNLFTDHFGQEDLMIALLKQQQGIAPVE-NEFDFDGYSLDNIPV 678
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MT30_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_24767 PE=4 SV=1)

HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0
Identity = 435/603 (72.14%), Postives = 485/603 (80.43%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLL--MQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SK+RKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTMEPKQL  L H AQS+GNMNM V  HG+Q+SQNNPLL  M   Q Q+RGQ+L DST+  APRL S MGQP+LSNG+ATNVS+RNG+PENIRAP Y   SQT SMLNFP+NH SELPGNSF L STPG+S L  K AFQEDVNSEIKGS G MPSYD+FNDLNQHKPQ+WELQNVGM F++SQHSNSLQGNLD TQS L QQGF SGQ    NR++ V +KAMFS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKKRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEPKQLVSLRHAAQSIGNMNMQVPPHGAQNSQNNPLLMQMGQQQQQSRGQILVDSTINHAPRLSSSMGQPILSNGIATNVSSRNGIPENIRAPGY---SQTPSMLNFPVNHASELPGNSFALGSTPGVSILTSKGAFQEDVNSEIKGSGGLMPSYDVFNDLNQHKPQSWELQNVGMAFDTSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVANKAMFSTGDVKELGSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2UVE1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0
Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 680
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2NHH8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G029200 PE=4 SV=1)

HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 427/602 (70.93%), Postives = 472/602 (78.41%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSS NEGNWKSSK+RKDDEDE ++RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H  N NNSFMNPQD TFGPL      DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPTTME KQL  L  T+QS+GN++M V  HG+QSSQNN  L++M QP +R Q+LNDSTV L+      +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP +SF L STPG+S    K AF ED NSEIKGS GF+P+YD+FND  Q+K QNWELQN GM+   SQHSNSLQGNLD  QS+LVQQGF    ++GQNR+  ++SKAMFSAGDST   N  N N HLN++  +NTVRVKS  VAD  P+NL+ DHFG+EDLM ALLKQQ  IAPAE N+FDFDGYS+DNIPV
Sbjct:  124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSVNEGNWKSSKKRKDDEDETEDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNPNNSFMNPQDETFGPLSSVHGLDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTTMESKQLTSLRRTSQSIGNVSMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDSFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPTYDVFNDY-QYKSQNWELQNAGMILEDSQHSNSLQGNLDLAQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRAENTVRVKSGSVADGNPSNLFADHFGQEDLMIALLKQQQGIAPAE-NEFDFDGYSLDNIPV 678
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2RQ03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:   34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 593
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2TAL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 437/605 (72.23%), Postives = 483/605 (79.83%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI++                                        VPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDT----------------------------------------VPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 21
Match NameE-valueIdentityDescription
PCL1_ARATH7.399e-1641.90Transcription factor LUX OS=Arabidopsis thaliana G... [more]
PCLL_ARATH7.506e-1540.95Transcription factor BOA OS=Arabidopsis thaliana G... [more]
ARR19_ARATH2.041e-1329.47Putative two-component response regulator ARR19 OS... [more]
APRR4_ARATH2.731e-1331.73Putative two-component response regulator-like APR... [more]
PCL1_ORYSJ6.555e-1336.36Transcription factor PCL1 OS=Oryza sativa subsp. j... [more]
GLK2_ARATH4.607e-1038.38Transcription activator GLK2 OS=Arabidopsis thalia... [more]
ARR21_ARATH1.246e-935.00Putative two-component response regulator ARR21 OS... [more]
ARR13_ARATH2.273e-872.22Putative two-component response regulator ARR13 OS... [more]
GLK1_ARATH5.011e-836.36Transcription activator GLK1 OS=Arabidopsis thalia... [more]
GLK2_ORYSJ1.054e-735.35Probable transcription factor GLK2 OS=Oryza sativa... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2T4M5_GOSRA0.000e+091.36Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0MGP4_GOSAR0.000e+090.36Two-component response regulator ARR1-like protein... [more]
A0A061EWK1_THECC0.000e+078.04Sensor histidine kinase, putative isoform 1 OS=The... [more]
A0A061ENM9_THECC0.000e+077.82Sensor histidine kinase, putative isoform 2 (Fragm... [more]
A0A0B0M7N9_GOSAR0.000e+071.59Two-component response regulator ARR1-like protein... [more]
A0A0B0MT30_GOSAR0.000e+072.14Two-component response regulator ARR1-like protein... [more]
A0A0D2UVE1_GOSRA0.000e+072.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2NHH8_GOSRA0.000e+070.93Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RQ03_GOSRA0.000e+072.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TAL1_GOSRA0.000e+072.23Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 2..23
e-value: 1.5E-7
score: 29.6
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 1..27
e-value: 4.9E-11
score: 42.1
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 1..27
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 1..143
NoneNo IPR availablePANTHERPTHR26402:SF617TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATEDcoord: 1..143

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094779 ID=g.barbadense_cottongen_reftransV1_0094779; Name=g.barbadense_cottongen_reftransV1_0094779; organism=Gossypium barbadense; type=contig; length=2440bp
ATGAAGGGCGTTACCCACGGTGCTTGCGATTACCTAATCAAACCAGTTCG
AATTGAGGCACTGAAGAACATATGGCAACATGTGGTTCGGAAGAGGAAGA
ATGAGTGGAAAGACTTGGAGCAGTCGGGAAGTGTAGAAGAAGGAGATCGG
CAGCCAAAACAATCTGAAGATGCAGATTACTCATCCTCAGCTAATGAAGG
GAATTGGAAAAGCTCAAAACGGAGGAAGGACGATGAAGATGAAAATGATG
AGAGGGATGATACATCAACGCTAAAGAAGCCGAGGGTTGTTTGGTCTGTT
GAACTCCATCAACAGTTTGTTGCAGCAGTTAATCAACTAGGCATCGAAAG
TACGAGTCTTTACTCCATTTTCTTTTACAATTTACTGAATGTTACATCTT
CAATAATCGATTGACTATTGTTGTCTTCCCTTTCGTATGATTTTTCTGGT
TGATCTTCTAATACAGAGGCTGTCCCGAAGAAAATTTTGGAGTTGATGAA
CGTTCCCGGACTTACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATC
GCTTGTATCTTAGAAGGTTGTGTGGGGTATCGCAACACCCGAGTAATCTG
AATAATTCTTTTATGAATCCCCAAGATGCAACTTTTGGGCCACTTGATCT
TCAAGCTCTTGCTGCCACTGGTCAACTTCCCGCACAAAGTCTTGCCACAC
TCCAAGCAGCAGGGCTTGGTCGGTCAACTGCTAAATCAGGCATACCTATG
CCCCTCATTGATCAAAGAAACATTTTTAGCTTCGAAAACCCAAAGTTAAG
ATTTGGAGAAGCGCAGCAACAACATGTGAGCAATAATAAGCAAACGAATT
TACTTCATGGAATTCCAACAACTATGGAGCCAAAACAGCTTGCCGGCTTG
CACCACACGGCGCAATCAATGGGAAACATGAATATGCCAGTCCTTTCCCA
CGGTTCACAAAGTAGCCAAAATAATCCGTTATTGATGCAGATGGCTCAGC
CACAGGCTAGAGGACAAATGCTCAATGATTCCACTGTCGGTCTTGCTCCG
AGACTTCTTTCACCAATGGGGCAGCCCATGTTATCCAATGGAATGGCTAC
AAATGTCTCTACAAGAAATGGGGTTCCGGAAAATATCCGAGCCCCTAGTT
ATAATCCAGTTTCTCAGACCTCTTCAATGTTGAACTTCCCCATGAATCAC
ACTTCAGAACTACCTGGTAACAGTTTCCCTCTTGTAAGTACTCCGGGGAT
TTCTAGTCTAGCACCCAAAGTGGCTTTTCAGGAAGACGTTAACTCAGAAA
TCAAAGGATCAGTGGGTTTTATGCCAAGTTACGATATATTTAATGACTTG
AATCAGCATAAACCCCAAAACTGGGAACTACAGAACGTAGGCATGATGTT
CAATTCCTCTCAGCATTCGAACTCTCTTCAAGGTAACCTTGATCACACAC
AATCGATTTTAGTTCAACAAGGATTCTTGTCCGGACAGAACAGGAATTCA
ACCGTCATAAGTAAGGCAATGTTCTCAGCCGGAGATAGTACTGGCCATGT
GAACGCTCAAAACAGTAATCAACATCTCAACTCCCTTCTTGACAATACAG
TAAGGGTCAAATCCGAGAGAGTTGCTGATACGGCCCCTGCCAATCTATAC
CCTGATCACTTCGGACGAGAGGATCTCATGAGTGCTCTTTTGAAACAGCA
AGACATCATCGCACCGGCTGAAAACAACGATTTCGATTTCGATGGATATT
CCATCGATAATATTCCAGTTTAACAGGACCGGCTAAACAGGTATCTGTTA
CCATTTGGACCGACAATTACAATGCTTGTAAGATATTTCTGCATGATAAT
GCAAAGGCGATCGTGCAAATTTTTGATTGTTTTTTCGGTAACGAAATCGG
GCAGGCCAAAAAACACTAATTTTTAGGGTCTTTTTTCAAGTTGGTGAAGC
ATATTGTTTTTCTAGTCATCAGCAAGATCATAGGAGACTTATTTTCTAAC
TCTAAATAACAGATGAAATTTGATCTTCTATTTTGGTTTTGTTTTTATTG
TTATTCTGTTTTTGTGGAGGAATTGACTGTTATGTATATACACCATTTGA
TTGCTCTACATATAAGCCTGTCTGGGTATTCATTTATAGCTATTTTATTT
ATCAAATTTATCATGAGATCCTCCTATATGTGTTAGGTCTAATTATGATT
TTAGTCCCCATATTATGTTGAAATTTGGAATTTTATCTCTTTATAATTTG
TTTTTTATTAATAAGTTGAAATTGTAGTTGTAAAAATGATAGCGGGTTAG
ATATCTGTATTTAACAGTGCTTCACGCTTGGATGGACCACTTGAATATTT
GAATGTGATTTATTTTTATGGATAATAGGTTCGATATTCATTTAGAAATT
TTAATTCTTTTCGGTCCCTGGAAATTAGGTCTACTTTGGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding