g.barbadense_cottongen_reftransV1_0094779, g.barbadense_cottongen_reftransV1_0094779 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094779
Unique Nameg.barbadense_cottongen_reftransV1_0094779
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2440
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At09chromosomeg.barbadense_cottongen_reftransV1_0094779:28..2440 .
At09:77631613..77634200 -
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.652e-130
Identity = 288/639 (45.07%), Postives = 385/639 (60.25%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSG-SVEEG----DRQPKQSEDADY-SSSANEGNWKSSXXXXXXXXXXX--XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRST-AKSGIPM-PLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMG-QPMLSNGMATN------VSTRNGVPE-NIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVN-SEIKG-----SVGFM-PSYDIFNDLNQHKPQN---------WELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNR--NSTVISKAMFSAGDSTGHVNAQNSN-QHLNSLL--DNTVRVKSERVADTA---PAN-LYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            +KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW   E SG S+E+     DRQ +  EDAD  SSS NEGN +SS++RK++E ++   +++D+S+LKKPRVVWSVELHQQFVAAVNQLG++                                       +AVPKKILE+MNVPGLTRENVASHLQKYR+YLRRL GVSQH  N+N+SFM  QD +FGPL      DLQ+LA TGQLP QSLA LQAAGLGR T AK G+ + PL+DQR+IF+FENPK+RFG+   Q ++N    NLLHG+PT    +   G                    Q+ Q++ +++ +A    RG           P +L  +G QP+LS+ ++        ++ RN +PE N R      +  T S+ N   N  ++LP +SFPL S PGI S+   V++QE+VN S+ KG     + GF  PSYDIFND  QH+  N         W+L+N+G++F+S+Q + +       + S          + R  ++TV+       G+   ++ + + N  HLN +     +VRVKSERVA+T    PAN L+ + + +EDLMSA LKQ+ I  P+ +N+F+FDGYSIDNI V
Sbjct:  116 LKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVD---------------------------------------KAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAKPGMSVSPLVDQRSIFNFENPKIRFGDGHGQTMNNG---NLLHGVPTGSHMRLRPG--------------------QNVQSSGMMLPVADQLPRG----------GPSMLPSLGQQPILSSSVSRRSDLTGALAVRNSIPETNSRV-----LPTTHSVFN---NFPADLPRSSFPLASAPGI-SVPVSVSYQEEVNSSDAKGGSSAATAGFGNPSYDIFNDFPQHQQHNKNISNKLNDWDLRNMGLVFSSNQDAATATATAAFSTSEAYSSSSTQRKRRETDATVV-------GEHGQNLQSPSRNLYHLNHVFMDGGSVRVKSERVAETVTCPPANTLFHEQYNQEDLMSAFLKQEGI--PSVDNEFEFDGYSIDNIQV 664          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 6.409e-129
Identity = 299/640 (46.72%), Postives = 373/640 (58.28%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEE-GDRQPKQ------------SEDA--DYSSSANEGN-WKSSXXXXXXXXXXX----XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRS--TAKSGIPM-PLIDQRNIFSFENPKLRFGEA---QQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQA--RG--QMLNDSTVGLAPRLLSPMGQPMLSNGMA--TNVSTRNGVPENIRA--PSYNPVSQTSSMLNFPMNHTS-ELPGNSFPLVSTPGISSLAPK-VAFQEDVNSEIKGSVGF-MPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSN---QHLNSLLD---NTVRVKSERVA-DTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            +KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW   E SGS+EE G+RQ +Q             EDA  D SSS NEGN W+SS R++ DE+  +    + +D S LKKPRVVWSVELHQQFVAAVNQLG+E                                       +AVPKKILELMNVPGLTRENVASHLQKYR+YLRRL GVSQH  NLNNSFM  QDA+FGPL      DLQALA TGQLPAQSLA LQAAGLGR    +KSG+P+  ++D+R+IFSF+N K RFGE      Q      Q NLLHG+PT ++ +   G   + Q      +  +  G+ S QNN +LM +A  Q+  RG   ML  S         S + QPMLSN ++  +  S RN +PE+ R    SY  ++   S  + P N+   ELP NSFPL S PGIS    K  ++QE+VNS      GF  PSYD+F      +  +W+L+N+G+ F+S Q       + +       +    S  +R++T +      A    G  + Q  +   QH     D    +VRVKSERVA DTA    +  +  +EDLMSALLKQ+  IAP +  +FDFD YSIDNIPV
Sbjct:  125 LKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQQQLPMGNRMSIQQ----QIAAVRAGN-SVQNNGMLMPLAGQQSLPRGPPPMLTSSQ--------SSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFPLASAPGISVPVRKATSYQEEVNSS---EAGFTTPSYDMFTT----RQNDWDLRNIGIAFDSHQ-------DSESAAFSASEAYSSSSMSRHNTTV------AATEHGRNHQQPPSGMVQHHQVYADGNGGSVRVKSERVATDTATMAFHEQYSNQEDLMSALLKQEG-IAPVD-GEFDFDAYSIDNIPV 690          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.018e-37
Identity = 98/242 (40.50%), Postives = 129/242 (53.31%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTL-------KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATL 702
            M G+ HGACDYLIKP+R E LKNIWQHVVR++    K+L  S ++E+       ++     S  + E   K   ++K  +   D  D+   L       KK RVVWS+ELHQQFV AVN+LGI+                                       +AVPK+ILELMNVPGL+RENVASHLQK+RLYL+RL G +           N  ++T    ++QAL ++GQL  Q+LA L
Sbjct:  100 MTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGID---------------------------------------KAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQS--------NDSESTKRYENIQALVSSGQLHPQTLAAL 294          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.235e-36
Identity = 95/206 (46.12%), Postives = 121/206 (58.74%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSAN--EGNWKSSXXXXXXXXXXXXXXXTSTL-KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNS 609
            MKGVTHGACDYL+KPVRIE LKNIWQHVVR R ++ +     GS   GD++     +   +S  N  +GN K   +  +DEDE+ + +D S   KK RVVW+VELH++FVAAVNQLG E                                       +A+PKKIL+LMNV  LTRENVASHLQK+RLYL+R+ GV+   + + NS
Sbjct:  105 MKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNR-----GSNNNGDKRDGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYE---------------------------------------KAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMANS 266          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.721e-29
Identity = 87/235 (37.02%), Postives = 118/235 (50.21%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATF---GPLD-LQALAATGQLPAQSL 693
            MKG+ HGACDYL+KPV ++ L+NIW HVV+K    +  L       E D  P  S       + +     S +   D E    + D + T KKPRVVWS ELHQ+FV+AV QLG++                                       +AVPKKIL+LM++ GLTRENVASHLQKYRLYL+++    Q   N+       +D+++     LD L+   A  Q+P+  L
Sbjct:  105 MKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPP---SESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLD---------------------------------------KAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQ--NMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGL 295          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.114e-29
Identity = 79/193 (40.93%), Postives = 104/193 (53.89%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANE---GNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            MKGV HGACDYL+KP+R++ LK IWQHV+RK+  E +D+E  G  E G     + ++A +     +   G  +     +    +++    +S+ KK RVVWS ELH +FV AVNQ+G +                                       +A PKKIL+LMNVP LTRENVASHLQKYRLYL RL
Sbjct:   99 MKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDH--------------------------------------KAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.513e-27
Identity = 79/193 (40.93%), Postives = 101/193 (52.33%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDL---EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            MKGV HGACDYL+KPVRIE LKNIWQHVVRK K +         SG+ ++ +R  K+ E  +       GN               + DD +  KKPRV+W+ ELH +F+AAV+ LG+E                                        AVPKKIL+LMNV  LTRENVASHLQK+R+ L+++
Sbjct:  105 MKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANR--KRKEQYEEEEEEERGN---------------DNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVE---------------------------------------RAVPKKILDLMNVDKLTRENVASHLQKFRVALKKV 241          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.268e-21
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618
            MK V +GA D+L+KPVRIE L NIWQH+ RK+  + K+    G++E+    P      ++  A   S+A E +    +    D+  N   + T    L K R+ W+ +LH+QF+AAVN LG                                         +AVPKKIL +M V  LTRE VASHLQKYR+ L++ +   S+H + L+++ ++
Sbjct:   99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.309e-21
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618
            MK V +GA D+L+KPVRIE L NIWQH+ RK+  + K+    G++E+    P      ++  A   S+A E +    +    D+  N   + T    L K R+ W+ +LH+QF+AAVN LG                                         +AVPKKIL +M V  LTRE VASHLQKYR+ L++ +   S+H + L+++ ++
Sbjct:   99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.420e-16
Identity = 63/197 (31.98%), Postives = 90/197 (45.69%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKR--KNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELM----NVPGLTRENVASHLQKYRLYLRRLC 573
            M+ + +GACD+L+KPV  E +  +W+HV RKR  K+      +SG+VE    +    E  +   S  EG+  +   +++           S  KKPR+ W+ ELH +F  AV ++G    SL                                   +A PK IL+ M    NV GLTR NVASHLQKYR   ++ C
Sbjct:  127 MESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEK----------SPTKKPRMQWTPELHHKFEVAVEKMG----SL----------------------------------EKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTC 275          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: I1KMU8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0
Identity = 381/603 (63.18%), Postives = 466/603 (77.28%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNS-LLDNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDRQPK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +N+NNSF++PQ+ATFG +      DLQ LA  GQLPAQSLATLQAAGLGR T K+G+PMPL+DQRN+FSFENP+LRFGE QQQH+S +K  NLLHGIPT MEPKQLA LH + QS+G++NM V    + ++Q +PLLMQMAQ Q RGQML+++     PRL S +GQP +SNG++  +  RNG+  N R P+YNPV  +SS+L+FPMN TSE+   NSFPL STPGISS+  K +FQE+V S IKGS GF PSYDIFN+L+  KP +WE+ N  + +N+SQH+N LQGN+D T S+LV QGF S    GQ+R++ +I KAMFS G+     N QN++Q+LNS LLDN++RVK+ER+ D ++  NL+P+H+G+EDLMSALLKQQ+ + P+E N+FDFDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGKAGVPMPLMDQRNLFSFENPRLRFGEGQQQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGSLNMRV---NASATQGSPLLMQMAQSQPRGQMLSENIGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPLGSTPGISSITTKGSFQEEVTSGIKGSGGF-PSYDIFNELHHQKPHDWEITNPNLTYNASQHANPLQGNIDVTPSVLVHQGFSSTQQTGQSRDAALIGKAMFSMGEGLEQNNFQNASQNLNSLLLDNSIRVKAERIPDASSQTNLFPEHYGQEDLMSALLKQQEGMGPSE-NEFDFDGYSLDNIPV 679          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B2P0V1_GLYSO (Two-component response regulator ARR2 OS=Glycine soja GN=glysoja_009791 PE=4 SV=1)

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 380/603 (63.02%), Postives = 465/603 (77.11%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNS-LLDNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDRQPK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +N+NNSF++PQ+ATFG +      DLQ LA  GQLPAQSLATLQAAGLGR T K+G+PMPL+DQRN+FSFENP+LRFGE QQQH+S +K  NLLHGIPT MEPKQLA LH + QS+G++NM V    + ++Q +PLLMQMAQ Q RGQML+++     PRL S +GQP +SNG++  +  RNG+  N R P+YNPV  +SS+L+FPMN TSE+   NSFPL STPGISS+  K +FQE+V S IKGS GF PSYDIFN+L+  KP +WE+ N  + +N+SQH+N LQGN+D T S+LV QGF S    GQ+R++ +I KAMFS G+     N QN++Q+LN  LLDN++RVK+ER+ D ++  NL+P+H+G+EDLMSALLKQQ+ + P+E N+FDFDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGKAGVPMPLMDQRNLFSFENPRLRFGEGQQQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGSLNMRV---NASATQGSPLLMQMAQSQPRGQMLSENIGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPLGSTPGISSITTKGSFQEEVTSGIKGSGGF-PSYDIFNELHHQKPHDWEITNPNLTYNASQHANPLQGNIDVTPSVLVHQGFSSTQQTGQSRDAALIGKAMFSMGEGLEQNNFQNASQNLNPLLLDNSIRVKAERIPDASSQTNLFPEHYGQEDLMSALLKQQEGMGPSE-NEFDFDGYSLDNIPV 679          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: D7GN43_POPCA (Putative B-type response regulator 12 OS=Populus canadensis GN=rr12 PE=2 SV=1)

HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0
Identity = 389/612 (63.56%), Postives = 459/612 (75.00%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEG-DRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPG--ISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNS-TVISKAMFSAGDSTG---HVNAQNSNQHLNSLL-DNTVRVKSERVADTAPAN-LYPDHFGREDLMSALLK---QQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKP+RIEALKNIWQHVVRKRKNEW+DLEQSGSVEEG DRQ KQ EDADYSSSANEG+WK+SKRRKD+E+E +ERDDTS LKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRR+ GVSQH + + ++F++PQ+AT+GPL      DLQ LA  GQLPAQSLATLQAAGLGRSTAK  +PMP++DQRN+FSFENPKLRFGE QQQH++N KQTNLLHGIPTTMEPKQLA LHH+AQS+G+MNM   +H  QSS    LLMQM+Q Q+RGQ+LN++T    PRL S +GQP+ SN +A+ V TRNG+ EN R   +NPVSQ+S++LNFP+N T+EL   SFPL S     + SL  K  FQE+++SEIKG  GFMPSYDIF+DL QH+  +WELQNVGM FN SQ SNS+Q NLD   S+L  QGF S    GQ+RN+ +V+ K MFSAGD+     HVNAQ+    +N+ L +N++RVK+ER  D  P   L+ + FG+EDLMSALLK   QQ  I  AE N+FD DGYS+DNIPV
Sbjct:  122 MKGVTHGACDYLIKPIRIEALKNIWQHVVRKRKNEWRDLEQSGSVEEGGDRQQKQPEDADYSSSANEGSWKNSKRRKDEEEETEERDDTSALKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGVSQHQNGMGSTFISPQEATYGPLSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRSTAKPRMPMPIVDQRNLFSFENPKLRFGEGQQQHLNNGKQTNLLHGIPTTMEPKQLANLHHSAQSLGSMNMQFNAHAGQSSS---LLMQMSQQQSRGQILNETTHSHVPRLSSSIGQPIASNALASGVLTRNGLSENGRGIGFNPVSQSSTLLNFPLNTTAELTATSFPLGSGSAAEVPSLTSKGTFQEEISSEIKGPGGFMPSYDIFSDLQQHRSHDWELQNVGMTFNGSQQSNSVQSNLDVAPSVLSHQGFSSCQSNGQSRNNISVVGKPMFSAGDAGDAMEHVNAQSLEHPINTFLAENSMRVKTERAPDANPQTALFNEQFGQEDLMSALLKQQQQQGGIGLAE-NEFDLDGYSLDNIPV 690          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: I1MRN2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0
Identity = 373/603 (61.86%), Postives = 456/603 (75.62%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDR PK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +NLNNSF+ PQ+ATFG +      DLQ LA  GQLPAQSLATLQAAGLGRSTAK+G+P+PL+DQRN+FSFENP+LRFGE Q QH+S +K  NLLHGIPT MEPKQLA LH + QS+G +NM V    + ++Q NP+LMQMAQ Q RGQML+++T    PRL S +GQP +SNG++  +  RNG+  N R P+YNPV  +SS+L+FPMN TSE+   NSFP+ +TPGISS+  K +FQE+V S IKGS GF PSYDIFN+L+  K  + E+ N G+ +N+S H N LQGN+D   S+LV QGF S    GQ+R+  +I KAMFS G+     N QN+N   N LL DN++R+K+ER+ D ++  NL+P+H+G+EDLM+ALLKQQ+ + PAE N+F+FDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRSTAKAGVPIPLMDQRNLFSFENPRLRFGEGQPQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGGLNMRV---NASATQGNPILMQMAQSQPRGQMLSENTGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPIGTTPGISSITTKGSFQEEVTSGIKGSSGF-PSYDIFNELHHQKSHDLEITNPGLTYNASHHVNPLQGNIDVAPSVLVHQGFSSTQQTGQSRDGALIGKAMFSMGEGLEQNNLQNAN--FNPLLVDNSIRIKAERIPDASSQTNLFPEHYGQEDLMTALLKQQEGMGPAE-NEFEFDGYSLDNIPV 677          
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B2P6N3_GLYSO (Two-component response regulator ARR2 OS=Glycine soja GN=glysoja_004349 PE=4 SV=1)

HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0
Identity = 373/603 (61.86%), Postives = 456/603 (75.62%), Query Frame = 1
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDR PK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +NLNNSF+ PQ+ATFG +      DLQ LA  GQLPAQSLATLQAAGLGRSTAK+G+P+PL+DQRN+FSFENP+LRFGE Q QH+S +K  NLLHGIPT MEPKQLA LH + QS+G +NM V    + ++Q NP+LMQMAQ Q RGQML+++T    PRL S +GQP +SNG++  +  RNG+  N R P+YNPV  +SS+L+FPMN TSE+   NSFP+ +TPGISS+  K +FQE+V S IKGS GF PSYDIFN+L+  K  + E+ N G+ +N+S H N LQGN+D   S+LV QGF S    GQ+R+  +I KAMFS G+     N QN+N   N LL DN++R+K+ER+ D ++  NL+P+H+G+EDLM+ALLKQQ+ + PAE N+F+FDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRSTAKAGVPIPLMDQRNLFSFENPRLRFGEGQPQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGGLNMRV---NASATQGNPILMQMAQSQPRGQMLSENTGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPIGTTPGISSITTKGSFQEEVTSGIKGSSGF-PSYDIFNELHHQKSHDLEITNPGLTYNASHHVNPLQGNIDVAPSVLVHQGFSSTQQTGQSRDGALIGKAMFSMGEGLEQNNLQNAN--FNPLLVDNSIRIKAERIPDASSQTNLFPEHYGQEDLMTALLKQQEGMGPAE-NEFEFDGYSLDNIPV 677          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 21
Match NameE-valueIdentityDescription
ARR2_ARATH2.652e-13045.07Two-component response regulator ARR2 OS=Arabidops... [more]
ARR1_ARATH6.409e-12946.72Two-component response regulator ARR1 OS=Arabidops... [more]
ARR14_ARATH3.018e-3740.50Two-component response regulator ARR14 OS=Arabidop... [more]
ARR12_ARATH7.235e-3646.12Two-component response regulator ARR12 OS=Arabidop... [more]
ARR18_ARATH1.721e-2937.02Two-component response regulator ARR18 OS=Arabidop... [more]
ARR11_ARATH3.114e-2940.93Two-component response regulator ARR11 OS=Arabidop... [more]
ARR10_ARATH1.513e-2740.93Two-component response regulator ARR10 OS=Arabidop... [more]
EHD1_ORYSI2.268e-2133.64Two-component response regulator EHD1 OS=Oryza sat... [more]
EHD1_ORYSJ2.309e-2133.64Two-component response regulator EHD1 OS=Oryza sat... [more]
ARR20_ARATH3.420e-1631.98Putative two-component response regulator ARR20 OS... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1KMU8_SOYBN0.000e+063.18Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2P0V1_GLYSO0.000e+063.02Two-component response regulator ARR2 OS=Glycine s... [more]
D7GN43_POPCA0.000e+063.56Putative B-type response regulator 12 OS=Populus c... [more]
I1MRN2_SOYBN0.000e+061.86Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2P6N3_GLYSO0.000e+061.86Two-component response regulator ARR2 OS=Glycine s... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 2..23
e-value: 1.5E-7
score: 29.6
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 1..27
e-value: 4.9E-11
score: 42.1
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 1..27
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 1..143
NoneNo IPR availablePANTHERPTHR26402:SF617TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATEDcoord: 1..143

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094779 ID=g.barbadense_cottongen_reftransV1_0094779; Name=g.barbadense_cottongen_reftransV1_0094779; organism=Gossypium barbadense; type=contig; length=2440bp
ATGAAGGGCGTTACCCACGGTGCTTGCGATTACCTAATCAAACCAGTTCG
AATTGAGGCACTGAAGAACATATGGCAACATGTGGTTCGGAAGAGGAAGA
ATGAGTGGAAAGACTTGGAGCAGTCGGGAAGTGTAGAAGAAGGAGATCGG
CAGCCAAAACAATCTGAAGATGCAGATTACTCATCCTCAGCTAATGAAGG
GAATTGGAAAAGCTCAAAACGGAGGAAGGACGATGAAGATGAAAATGATG
AGAGGGATGATACATCAACGCTAAAGAAGCCGAGGGTTGTTTGGTCTGTT
GAACTCCATCAACAGTTTGTTGCAGCAGTTAATCAACTAGGCATCGAAAG
TACGAGTCTTTACTCCATTTTCTTTTACAATTTACTGAATGTTACATCTT
CAATAATCGATTGACTATTGTTGTCTTCCCTTTCGTATGATTTTTCTGGT
TGATCTTCTAATACAGAGGCTGTCCCGAAGAAAATTTTGGAGTTGATGAA
CGTTCCCGGACTTACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATC
GCTTGTATCTTAGAAGGTTGTGTGGGGTATCGCAACACCCGAGTAATCTG
AATAATTCTTTTATGAATCCCCAAGATGCAACTTTTGGGCCACTTGATCT
TCAAGCTCTTGCTGCCACTGGTCAACTTCCCGCACAAAGTCTTGCCACAC
TCCAAGCAGCAGGGCTTGGTCGGTCAACTGCTAAATCAGGCATACCTATG
CCCCTCATTGATCAAAGAAACATTTTTAGCTTCGAAAACCCAAAGTTAAG
ATTTGGAGAAGCGCAGCAACAACATGTGAGCAATAATAAGCAAACGAATT
TACTTCATGGAATTCCAACAACTATGGAGCCAAAACAGCTTGCCGGCTTG
CACCACACGGCGCAATCAATGGGAAACATGAATATGCCAGTCCTTTCCCA
CGGTTCACAAAGTAGCCAAAATAATCCGTTATTGATGCAGATGGCTCAGC
CACAGGCTAGAGGACAAATGCTCAATGATTCCACTGTCGGTCTTGCTCCG
AGACTTCTTTCACCAATGGGGCAGCCCATGTTATCCAATGGAATGGCTAC
AAATGTCTCTACAAGAAATGGGGTTCCGGAAAATATCCGAGCCCCTAGTT
ATAATCCAGTTTCTCAGACCTCTTCAATGTTGAACTTCCCCATGAATCAC
ACTTCAGAACTACCTGGTAACAGTTTCCCTCTTGTAAGTACTCCGGGGAT
TTCTAGTCTAGCACCCAAAGTGGCTTTTCAGGAAGACGTTAACTCAGAAA
TCAAAGGATCAGTGGGTTTTATGCCAAGTTACGATATATTTAATGACTTG
AATCAGCATAAACCCCAAAACTGGGAACTACAGAACGTAGGCATGATGTT
CAATTCCTCTCAGCATTCGAACTCTCTTCAAGGTAACCTTGATCACACAC
AATCGATTTTAGTTCAACAAGGATTCTTGTCCGGACAGAACAGGAATTCA
ACCGTCATAAGTAAGGCAATGTTCTCAGCCGGAGATAGTACTGGCCATGT
GAACGCTCAAAACAGTAATCAACATCTCAACTCCCTTCTTGACAATACAG
TAAGGGTCAAATCCGAGAGAGTTGCTGATACGGCCCCTGCCAATCTATAC
CCTGATCACTTCGGACGAGAGGATCTCATGAGTGCTCTTTTGAAACAGCA
AGACATCATCGCACCGGCTGAAAACAACGATTTCGATTTCGATGGATATT
CCATCGATAATATTCCAGTTTAACAGGACCGGCTAAACAGGTATCTGTTA
CCATTTGGACCGACAATTACAATGCTTGTAAGATATTTCTGCATGATAAT
GCAAAGGCGATCGTGCAAATTTTTGATTGTTTTTTCGGTAACGAAATCGG
GCAGGCCAAAAAACACTAATTTTTAGGGTCTTTTTTCAAGTTGGTGAAGC
ATATTGTTTTTCTAGTCATCAGCAAGATCATAGGAGACTTATTTTCTAAC
TCTAAATAACAGATGAAATTTGATCTTCTATTTTGGTTTTGTTTTTATTG
TTATTCTGTTTTTGTGGAGGAATTGACTGTTATGTATATACACCATTTGA
TTGCTCTACATATAAGCCTGTCTGGGTATTCATTTATAGCTATTTTATTT
ATCAAATTTATCATGAGATCCTCCTATATGTGTTAGGTCTAATTATGATT
TTAGTCCCCATATTATGTTGAAATTTGGAATTTTATCTCTTTATAATTTG
TTTTTTATTAATAAGTTGAAATTGTAGTTGTAAAAATGATAGCGGGTTAG
ATATCTGTATTTAACAGTGCTTCACGCTTGGATGGACCACTTGAATATTT
GAATGTGATTTATTTTTATGGATAATAGGTTCGATATTCATTTAGAAATT
TTAATTCTTTTCGGTCCCTGGAAATTAGGTCTACTTTGGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding