g.barbadense_cottongen_reftransV1_0094779, g.barbadense_cottongen_reftransV1_0094779 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 2.652e-130 Identity = 288/639 (45.07%), Postives = 385/639 (60.25%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSG-SVEEG----DRQPKQSEDADY-SSSANEGNWKSSXXXXXXXXXXX--XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRST-AKSGIPM-PLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMG-QPMLSNGMATN------VSTRNGVPE-NIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVN-SEIKG-----SVGFM-PSYDIFNDLNQHKPQN---------WELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNR--NSTVISKAMFSAGDSTGHVNAQNSN-QHLNSLL--DNTVRVKSERVADTA---PAN-LYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 +KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW E SG S+E+ DRQ + EDAD SSS NEGN +SS++RK++E ++ +++D+S+LKKPRVVWSVELHQQFVAAVNQLG++ +AVPKKILE+MNVPGLTRENVASHLQKYR+YLRRL GVSQH N+N+SFM QD +FGPL DLQ+LA TGQLP QSLA LQAAGLGR T AK G+ + PL+DQR+IF+FENPK+RFG+ Q ++N NLLHG+PT + G Q+ Q++ +++ +A RG P +L +G QP+LS+ ++ ++ RN +PE N R + T S+ N N ++LP +SFPL S PGI S+ V++QE+VN S+ KG + GF PSYDIFND QH+ N W+L+N+G++F+S+Q + + + S + R ++TV+ G+ ++ + + N HLN + +VRVKSERVA+T PAN L+ + + +EDLMSA LKQ+ I P+ +N+F+FDGYSIDNI V Sbjct: 116 LKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVD---------------------------------------KAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAKPGMSVSPLVDQRSIFNFENPKIRFGDGHGQTMNNG---NLLHGVPTGSHMRLRPG--------------------QNVQSSGMMLPVADQLPRG----------GPSMLPSLGQQPILSSSVSRRSDLTGALAVRNSIPETNSRV-----LPTTHSVFN---NFPADLPRSSFPLASAPGI-SVPVSVSYQEEVNSSDAKGGSSAATAGFGNPSYDIFNDFPQHQQHNKNISNKLNDWDLRNMGLVFSSNQDAATATATAAFSTSEAYSSSSTQRKRRETDATVV-------GEHGQNLQSPSRNLYHLNHVFMDGGSVRVKSERVAETVTCPPANTLFHEQYNQEDLMSAFLKQEGI--PSVDNEFEFDGYSIDNIQV 664
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 408.297 bits (1048), Expect = 6.409e-129 Identity = 299/640 (46.72%), Postives = 373/640 (58.28%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEE-GDRQPKQ------------SEDA--DYSSSANEGN-WKSSXXXXXXXXXXX----XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRS--TAKSGIPM-PLIDQRNIFSFENPKLRFGEA---QQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQA--RG--QMLNDSTVGLAPRLLSPMGQPMLSNGMA--TNVSTRNGVPENIRA--PSYNPVSQTSSMLNFPMNHTS-ELPGNSFPLVSTPGISSLAPK-VAFQEDVNSEIKGSVGF-MPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSN---QHLNSLLD---NTVRVKSERVA-DTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 +KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW E SGS+EE G+RQ +Q EDA D SSS NEGN W+SS R++ DE+ + + +D S LKKPRVVWSVELHQQFVAAVNQLG+E +AVPKKILELMNVPGLTRENVASHLQKYR+YLRRL GVSQH NLNNSFM QDA+FGPL DLQALA TGQLPAQSLA LQAAGLGR +KSG+P+ ++D+R+IFSF+N K RFGE Q Q NLLHG+PT ++ + G + Q + + G+ S QNN +LM +A Q+ RG ML S S + QPMLSN ++ + S RN +PE+ R SY ++ S + P N+ ELP NSFPL S PGIS K ++QE+VNS GF PSYD+F + +W+L+N+G+ F+S Q + + + S +R++T + A G + Q + QH D +VRVKSERVA DTA + + +EDLMSALLKQ+ IAP + +FDFD YSIDNIPV Sbjct: 125 LKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQQQLPMGNRMSIQQ----QIAAVRAGN-SVQNNGMLMPLAGQQSLPRGPPPMLTSSQ--------SSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFPLASAPGISVPVRKATSYQEEVNSS---EAGFTTPSYDMFTT----RQNDWDLRNIGIAFDSHQ-------DSESAAFSASEAYSSSSMSRHNTTV------AATEHGRNHQQPPSGMVQHHQVYADGNGGSVRVKSERVATDTATMAFHEQYSNQEDLMSALLKQEG-IAPVD-GEFDFDAYSIDNIPV 690
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.018e-37 Identity = 98/242 (40.50%), Postives = 129/242 (53.31%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTL-------KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATL 702 M G+ HGACDYLIKP+R E LKNIWQHVVR++ K+L S ++E+ ++ S + E K ++K + D D+ L KK RVVWS+ELHQQFV AVN+LGI+ +AVPK+ILELMNVPGL+RENVASHLQK+RLYL+RL G + N ++T ++QAL ++GQL Q+LA L Sbjct: 100 MTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGID---------------------------------------KAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQS--------NDSESTKRYENIQALVSSGQLHPQTLAAL 294
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 7.235e-36 Identity = 95/206 (46.12%), Postives = 121/206 (58.74%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSAN--EGNWKSSXXXXXXXXXXXXXXXTSTL-KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNS 609 MKGVTHGACDYL+KPVRIE LKNIWQHVVR R ++ + GS GD++ + +S N +GN K + +DEDE+ + +D S KK RVVW+VELH++FVAAVNQLG E +A+PKKIL+LMNV LTRENVASHLQK+RLYL+R+ GV+ + + NS Sbjct: 105 MKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNR-----GSNNNGDKRDGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYE---------------------------------------KAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMANS 266
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.721e-29 Identity = 87/235 (37.02%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATF---GPLD-LQALAATGQLPAQSL 693 MKG+ HGACDYL+KPV ++ L+NIW HVV+K + L E D P S + + S + D E + D + T KKPRVVWS ELHQ+FV+AV QLG++ +AVPKKIL+LM++ GLTRENVASHLQKYRLYL+++ Q N+ +D+++ LD L+ A Q+P+ L Sbjct: 105 MKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPP---SESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLD---------------------------------------KAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQ--NMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGL 295
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.114e-29 Identity = 79/193 (40.93%), Postives = 104/193 (53.89%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANE---GNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570 MKGV HGACDYL+KP+R++ LK IWQHV+RK+ E +D+E G E G + ++A + + G + + +++ +S+ KK RVVWS ELH +FV AVNQ+G + +A PKKIL+LMNVP LTRENVASHLQKYRLYL RL Sbjct: 99 MKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDH--------------------------------------KAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.513e-27 Identity = 79/193 (40.93%), Postives = 101/193 (52.33%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDL---EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570 MKGV HGACDYL+KPVRIE LKNIWQHVVRK K + SG+ ++ +R K+ E + GN + DD + KKPRV+W+ ELH +F+AAV+ LG+E AVPKKIL+LMNV LTRENVASHLQK+R+ L+++ Sbjct: 105 MKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANR--KRKEQYEEEEEEERGN---------------DNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVE---------------------------------------RAVPKKILDLMNVDKLTRENVASHLQKFRVALKKV 241
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.268e-21 Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618 MK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P ++ A S+A E + + D+ N + T L K R+ W+ +LH+QF+AAVN LG +AVPKKIL +M V LTRE VASHLQKYR+ L++ + S+H + L+++ ++ Sbjct: 99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.309e-21 Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618 MK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P ++ A S+A E + + D+ N + T L K R+ W+ +LH+QF+AAVN LG +AVPKKIL +M V LTRE VASHLQKYR+ L++ + S+H + L+++ ++ Sbjct: 99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.420e-16 Identity = 63/197 (31.98%), Postives = 90/197 (45.69%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKR--KNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELM----NVPGLTRENVASHLQKYRLYLRRLC 573 M+ + +GACD+L+KPV E + +W+HV RKR K+ +SG+VE + E + S EG+ + +++ S KKPR+ W+ ELH +F AV ++G SL +A PK IL+ M NV GLTR NVASHLQKYR ++ C Sbjct: 127 MESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEK----------SPTKKPRMQWTPELHHKFEVAVEKMG----SL----------------------------------EKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTC 275
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: I1KMU8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0 Identity = 381/603 (63.18%), Postives = 466/603 (77.28%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNS-LLDNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDRQPK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +N+NNSF++PQ+ATFG + DLQ LA GQLPAQSLATLQAAGLGR T K+G+PMPL+DQRN+FSFENP+LRFGE QQQH+S +K NLLHGIPT MEPKQLA LH + QS+G++NM V + ++Q +PLLMQMAQ Q RGQML+++ PRL S +GQP +SNG++ + RNG+ N R P+YNPV +SS+L+FPMN TSE+ NSFPL STPGISS+ K +FQE+V S IKGS GF PSYDIFN+L+ KP +WE+ N + +N+SQH+N LQGN+D T S+LV QGF S GQ+R++ +I KAMFS G+ N QN++Q+LNS LLDN++RVK+ER+ D ++ NL+P+H+G+EDLMSALLKQQ+ + P+E N+FDFDGYS+DNIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGKAGVPMPLMDQRNLFSFENPRLRFGEGQQQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGSLNMRV---NASATQGSPLLMQMAQSQPRGQMLSENIGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPLGSTPGISSITTKGSFQEEVTSGIKGSGGF-PSYDIFNELHHQKPHDWEITNPNLTYNASQHANPLQGNIDVTPSVLVHQGFSSTQQTGQSRDAALIGKAMFSMGEGLEQNNFQNASQNLNSLLLDNSIRVKAERIPDASSQTNLFPEHYGQEDLMSALLKQQEGMGPSE-NEFDFDGYSLDNIPV 679
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B2P0V1_GLYSO (Two-component response regulator ARR2 OS=Glycine soja GN=glysoja_009791 PE=4 SV=1) HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0 Identity = 380/603 (63.02%), Postives = 465/603 (77.11%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNS-LLDNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDRQPK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +N+NNSF++PQ+ATFG + DLQ LA GQLPAQSLATLQAAGLGR T K+G+PMPL+DQRN+FSFENP+LRFGE QQQH+S +K NLLHGIPT MEPKQLA LH + QS+G++NM V + ++Q +PLLMQMAQ Q RGQML+++ PRL S +GQP +SNG++ + RNG+ N R P+YNPV +SS+L+FPMN TSE+ NSFPL STPGISS+ K +FQE+V S IKGS GF PSYDIFN+L+ KP +WE+ N + +N+SQH+N LQGN+D T S+LV QGF S GQ+R++ +I KAMFS G+ N QN++Q+LN LLDN++RVK+ER+ D ++ NL+P+H+G+EDLMSALLKQQ+ + P+E N+FDFDGYS+DNIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGKAGVPMPLMDQRNLFSFENPRLRFGEGQQQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGSLNMRV---NASATQGSPLLMQMAQSQPRGQMLSENIGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPLGSTPGISSITTKGSFQEEVTSGIKGSGGF-PSYDIFNELHHQKPHDWEITNPNLTYNASQHANPLQGNIDVTPSVLVHQGFSSTQQTGQSRDAALIGKAMFSMGEGLEQNNFQNASQNLNPLLLDNSIRVKAERIPDASSQTNLFPEHYGQEDLMSALLKQQEGMGPSE-NEFDFDGYSLDNIPV 679
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: D7GN43_POPCA (Putative B-type response regulator 12 OS=Populus canadensis GN=rr12 PE=2 SV=1) HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0 Identity = 389/612 (63.56%), Postives = 459/612 (75.00%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEG-DRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPG--ISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNS-TVISKAMFSAGDSTG---HVNAQNSNQHLNSLL-DNTVRVKSERVADTAPAN-LYPDHFGREDLMSALLK---QQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKP+RIEALKNIWQHVVRKRKNEW+DLEQSGSVEEG DRQ KQ EDADYSSSANEG+WK+SKRRKD+E+E +ERDDTS LKKPRVVWSVELHQQFVAAVNQLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRR+ GVSQH + + ++F++PQ+AT+GPL DLQ LA GQLPAQSLATLQAAGLGRSTAK +PMP++DQRN+FSFENPKLRFGE QQQH++N KQTNLLHGIPTTMEPKQLA LHH+AQS+G+MNM +H QSS LLMQM+Q Q+RGQ+LN++T PRL S +GQP+ SN +A+ V TRNG+ EN R +NPVSQ+S++LNFP+N T+EL SFPL S + SL K FQE+++SEIKG GFMPSYDIF+DL QH+ +WELQNVGM FN SQ SNS+Q NLD S+L QGF S GQ+RN+ +V+ K MFSAGD+ HVNAQ+ +N+ L +N++RVK+ER D P L+ + FG+EDLMSALLK QQ I AE N+FD DGYS+DNIPV Sbjct: 122 MKGVTHGACDYLIKPIRIEALKNIWQHVVRKRKNEWRDLEQSGSVEEGGDRQQKQPEDADYSSSANEGSWKNSKRRKDEEEETEERDDTSALKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGVSQHQNGMGSTFISPQEATYGPLSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRSTAKPRMPMPIVDQRNLFSFENPKLRFGEGQQQHLNNGKQTNLLHGIPTTMEPKQLANLHHSAQSLGSMNMQFNAHAGQSSS---LLMQMSQQQSRGQILNETTHSHVPRLSSSIGQPIASNALASGVLTRNGLSENGRGIGFNPVSQSSTLLNFPLNTTAELTATSFPLGSGSAAEVPSLTSKGTFQEEISSEIKGPGGFMPSYDIFSDLQQHRSHDWELQNVGMTFNGSQQSNSVQSNLDVAPSVLSHQGFSSCQSNGQSRNNISVVGKPMFSAGDAGDAMEHVNAQSLEHPINTFLAENSMRVKTERAPDANPQTALFNEQFGQEDLMSALLKQQQQQGGIGLAE-NEFDLDGYSLDNIPV 690
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: I1MRN2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 373/603 (61.86%), Postives = 456/603 (75.62%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDR PK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +NLNNSF+ PQ+ATFG + DLQ LA GQLPAQSLATLQAAGLGRSTAK+G+P+PL+DQRN+FSFENP+LRFGE Q QH+S +K NLLHGIPT MEPKQLA LH + QS+G +NM V + ++Q NP+LMQMAQ Q RGQML+++T PRL S +GQP +SNG++ + RNG+ N R P+YNPV +SS+L+FPMN TSE+ NSFP+ +TPGISS+ K +FQE+V S IKGS GF PSYDIFN+L+ K + E+ N G+ +N+S H N LQGN+D S+LV QGF S GQ+R+ +I KAMFS G+ N QN+N N LL DN++R+K+ER+ D ++ NL+P+H+G+EDLM+ALLKQQ+ + PAE N+F+FDGYS+DNIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRSTAKAGVPIPLMDQRNLFSFENPRLRFGEGQPQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGGLNMRV---NASATQGNPILMQMAQSQPRGQMLSENTGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPIGTTPGISSITTKGSFQEEVTSGIKGSSGF-PSYDIFNELHHQKSHDLEITNPGLTYNASHHVNPLQGNIDVAPSVLVHQGFSSTQQTGQSRDGALIGKAMFSMGEGLEQNNLQNAN--FNPLLVDNSIRIKAERIPDASSQTNLFPEHYGQEDLMTALLKQQEGMGPAE-NEFEFDGYSLDNIPV 677
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B2P6N3_GLYSO (Two-component response regulator ARR2 OS=Glycine soja GN=glysoja_004349 PE=4 SV=1) HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 373/603 (61.86%), Postives = 456/603 (75.62%), Query Frame = 1 Query: 1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELP-GNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLS----GQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVAD-TAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGS EEGDR PK S++ADYSSSANEG+W++SK+R+D+E+E ++RDDTSTLKKPRVVWSVELHQQFVAAV+QLGI+ +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH +NLNNSF+ PQ+ATFG + DLQ LA GQLPAQSLATLQAAGLGRSTAK+G+P+PL+DQRN+FSFENP+LRFGE Q QH+S +K NLLHGIPT MEPKQLA LH + QS+G +NM V + ++Q NP+LMQMAQ Q RGQML+++T PRL S +GQP +SNG++ + RNG+ N R P+YNPV +SS+L+FPMN TSE+ NSFP+ +TPGISS+ K +FQE+V S IKGS GF PSYDIFN+L+ K + E+ N G+ +N+S H N LQGN+D S+LV QGF S GQ+R+ +I KAMFS G+ N QN+N N LL DN++R+K+ER+ D ++ NL+P+H+G+EDLM+ALLKQQ+ + PAE N+F+FDGYS+DNIPV Sbjct: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRSTAKAGVPIPLMDQRNLFSFENPRLRFGEGQPQHLSTSKPMNLLHGIPTNMEPKQLANLHQSTQSIGGLNMRV---NASATQGNPILMQMAQSQPRGQMLSENTGPRVPRLPSSLGQPTVSNGISNGLLGRNGIAGNNRGPAYNPVPPSSSLLSFPMNQTSEMSVNNSFPIGTTPGISSITTKGSFQEEVTSGIKGSSGF-PSYDIFNELHHQKSHDLEITNPGLTYNASHHVNPLQGNIDVAPSVLVHQGFSSTQQTGQSRDGALIGKAMFSMGEGLEQNNLQNAN--FNPLLVDNSIRIKAERIPDASSQTNLFPEHYGQEDLMTALLKQQEGMGPAE-NEFEFDGYSLDNIPV 677 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 21
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BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094779 ID=g.barbadense_cottongen_reftransV1_0094779; Name=g.barbadense_cottongen_reftransV1_0094779; organism=Gossypium barbadense; type=contig; length=2440bpback to top |