g.barbadense_cottongen_reftransV1_0094670, g.barbadense_cottongen_reftransV1_0094670 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: E0CPU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10420 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 9.869e-101 Identity = 212/412 (51.46%), Postives = 276/412 (66.99%), Query Frame = 3 Query: 642 GTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPK-FTFFHIR-MSFLSSCFTCHGF 1871 GTFPSPG +YR + + QKGWSSERV N N RRH+SA+ L PF +GRTLPSKWEDAERWI SPV G GV K QRRPKSKSGP+ PPGIA+YS SP++ + +GG +G N MAGSPFS GV+ DG+++H G G V V+++ + RSA + G S+L+++SSL S+DEK D +KDA + R SRRD+ATQMSP+ S S R S F S P +LP+ + + + SKL++R+VQ+D+R T+T SK+H R KG + +G+ + + + + +++E A SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ KAQEMRSS+ Q+ + K +F R MS LS CFTCH F Sbjct: 181 GTFPSPGTPNYRHSNFGI-QKGWSSERVPSHTNVN---RRHVSAA-LLPFNNGRTLPSKWEDAERWIFSPVAGDGVVKPSFPPPQRRPKSKSGPLGPPGIAYYSLYSPAIPMFEGGNAG---NFMAGSPFSAGVIAPDGLAIHCGG------RGGV-----MPVRTEPCMGRSASVHG-CSELLNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSPEGSIFSSPERKPS-FSPSSPTVLPIVELQSVNS-SKLEIRDVQVDERVTMTRWSKKHRGRIPGKGSENVDGWKKKAVEAHSSAWEVSETAKSISKVKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQRKAQEMRSSVLANHAHQVSGNAHKAVSFCKTRQMSSLSGCFTCHAF 570
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A061FIW3_THECC (Remorin family protein isoform 3 OS=Theobroma cacao GN=TCM_033821 PE=4 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 4.294e-100 Identity = 203/425 (47.76%), Postives = 261/425 (61.41%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVS--QKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPK-FTFFHIR-MSFLSSCFTCHGF 1871 MKK SV+ G FPSPG Y + + QKGWSSERV N RR +A+ + PF +GRTLPSKWEDAERWI SPV G G + QR+PKSKSGP+ PPGIA+YS SP+M++ DGG +G N MAGSPFS GV+ ADG+++H ++ G + CM ARS + G S + S DE L+ +KDA + R SRRDMATQMSP S++ S F P LP+ V + H SK +VR+VQ+D+R T+T SK+H +R K + + + + T + D+ E A +ISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQEMRS + + Q+ +TS K +F R M LS CFTCH F Sbjct: 1 MKKSSVATRKSGAFPSPGTPSYHHHHHSSAGMQKGWSSERVPLH---NNGGRRQGNAAGVLPFNNGRTLPSKWEDAERWIFSPVSGDGGVRQSIVPPQRKPKSKSGPLGPPGIAYYSLYSPAMHMFDGGHTG---NFMAGSPFSAGVIAADGLAIHS----SSHGGGFAARTEPCM-------ARSVSVHGCSEVVTPPSFPSQDADENLETVKDAATDISRTVSRRDMATQMSPQGSTNSSPKGRP--FSPLTPSALPIMEV-QSIHSSKSEVRDVQVDERVTMTRWSKKHRARNSGKSSEIVDDWRKRAVDTRTSTWDVTETAKNISKIKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQEMRSLMLANQAHQVTRTSHKALSFSRTRQMGSLSGCFTCHAF 405
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2QKE4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212800 PE=4 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.145e-98 Identity = 205/437 (46.91%), Postives = 261/437 (59.73%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPP--------------PILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSP-KFTFFHIR-MSFLSSCFTCHGF 1871 +KK SV LG FPSPG +Y N +V QKGWSSERVA +SNG RR +AS L F +GRTLPSKWEDAERWI SPV G SK H QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MAGSPFS GV+ ADG++VH + + G VQ++ + RS + G + +E LD +KDA + + SRRDMATQMSP +S+ HS P PI+ L ++ H SK +R+V +D+R T+T SK+H +R K + + + T + D+ E SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQ+MR+S+ + Q+ KTS +F R MS LS CFTC F Sbjct: 111 VKKSSVVTRKLGAFPSPGTPNYHHNSSVGMQKGWSSERVA--LHSNGG-RRQGNASGLLAFNNGRTLPSKWEDAERWIFSPVSGDAGSKQSIVHPQRRPKSKSGPLGPPGIAYYSLYSPALQMFDGGHMG---NFMAGSPFSAGVIAADGLTVH-----SRSHGGGF------AVQTEPCMGRSVSVHG--CSEAANPPSSQDAEENLDVVKDAATDISQTVSRRDMATQMSPQSST------------HSSPKGRPSFSPSSPSALPIMELQSI----HGSKSLLRDVPVDERVTLTRWSKKHRARNTGKSSEIVDDWRKKVVDTCTSTWDVTETGKSISKMKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQDMRNSMLANQAHQVTKTSHMAISFRRTRQMSSLSGCFTCQAF 512
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A067KQD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04252 PE=4 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.410e-98 Identity = 209/412 (50.73%), Postives = 270/412 (65.53%), Query Frame = 3 Query: 642 GTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFH--IRMSFLSSCFTCHGF 1871 GTFPSPG +YR + +V QKGWSSERV ++NGN RR +S S+L PF++GRTLPSKWEDAERWI SPV G G ++ RRPKSKSGP+ PPGIA+YS SP+M + DG G NL+A SPFS GV+ ADGV++ + G + V+++ +ARS + G V + S SQDEKLD +KDA + SRRDMATQMSP+ S+ S +R S F S P LP+ + N H +K +VR+VQ+D+R TVT SK+H +R K + + + + + + D++EAA SISK +REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQEMRSS+ + Q+ +TS K F +M LS CFTCH F Sbjct: 205 GTFPSPGTPNYR-HASVGMQKGWSSERVP--LHTNGN-RRQVS-SALLPFHNGRTLPSKWEDAERWIFSPVSGDGAARASLQAPHRRPKSKSGPLGPPGIAYYSLYSPAMPVFDGTHVG---NLLASSPFSAGVIAADGVAIR----------SNAHG-VAFPVRTEPCMARSVSVHG--CSEVLDQSSLPSQDEKLDGVKDAATDISSAVSRRDMATQMSPEGSNHSSPSRRLS-FSASTPSALPIVEL-QNIHSNKSEVRDVQMDERVTVTRWSKKHRTRNQGKSSEIVDDWRKKAVDARSSAWDVSEAAKSISKAKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQEMRSSVLANQAHQVSRTSHKVISFRRTRQMGSLSGCFTCHAF 593
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2S5L2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212800 PE=4 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 3.322e-98 Identity = 205/437 (46.91%), Postives = 261/437 (59.73%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPP--------------PILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSP-KFTFFHIR-MSFLSSCFTCHGF 1871 +KK SV LG FPSPG +Y N +V QKGWSSERVA +SNG RR +AS L F +GRTLPSKWEDAERWI SPV G SK H QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MAGSPFS GV+ ADG++VH + + G VQ++ + RS + G + +E LD +KDA + + SRRDMATQMSP +S+ HS P PI+ L ++ H SK +R+V +D+R T+T SK+H +R K + + + T + D+ E SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQ+MR+S+ + Q+ KTS +F R MS LS CFTC F Sbjct: 147 VKKSSVVTRKLGAFPSPGTPNYHHNSSVGMQKGWSSERVA--LHSNGG-RRQGNASGLLAFNNGRTLPSKWEDAERWIFSPVSGDAGSKQSIVHPQRRPKSKSGPLGPPGIAYYSLYSPALQMFDGGHMG---NFMAGSPFSAGVIAADGLTVH-----SRSHGGGF------AVQTEPCMGRSVSVHG--CSEAANPPSSQDAEENLDVVKDAATDISQTVSRRDMATQMSPQSST------------HSSPKGRPSFSPSSPSALPIMELQSI----HGSKSLLRDVPVDERVTLTRWSKKHRARNTGKSSEIVDDWRKKVVDTCTSTWDVTETGKSISKMKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQDMRNSMLANQAHQVTKTSHMAISFRRTRQMSSLSGCFTCQAF 548
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2TTA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212800 PE=4 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 6.517e-98 Identity = 205/437 (46.91%), Postives = 261/437 (59.73%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPP--------------PILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSP-KFTFFHIR-MSFLSSCFTCHGF 1871 +KK SV LG FPSPG +Y N +V QKGWSSERVA +SNG RR +AS L F +GRTLPSKWEDAERWI SPV G SK H QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MAGSPFS GV+ ADG++VH + + G VQ++ + RS + G + +E LD +KDA + + SRRDMATQMSP +S+ HS P PI+ L ++ H SK +R+V +D+R T+T SK+H +R K + + + T + D+ E SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQ+MR+S+ + Q+ KTS +F R MS LS CFTC F Sbjct: 177 VKKSSVVTRKLGAFPSPGTPNYHHNSSVGMQKGWSSERVA--LHSNGG-RRQGNASGLLAFNNGRTLPSKWEDAERWIFSPVSGDAGSKQSIVHPQRRPKSKSGPLGPPGIAYYSLYSPALQMFDGGHMG---NFMAGSPFSAGVIAADGLTVH-----SRSHGGGF------AVQTEPCMGRSVSVHG--CSEAANPPSSQDAEENLDVVKDAATDISQTVSRRDMATQMSPQSST------------HSSPKGRPSFSPSSPSALPIMELQSI----HGSKSLLRDVPVDERVTLTRWSKKHRARNTGKSSEIVDDWRKKVVDTCTSTWDVTETGKSISKMKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQDMRNSMLANQAHQVTKTSHMAISFRRTRQMSSLSGCFTCQAF 578
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A061FCH1_THECC (Remorin family protein isoform 1 OS=Theobroma cacao GN=TCM_033821 PE=4 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 6.912e-98 Identity = 203/425 (47.76%), Postives = 261/425 (61.41%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVS--QKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPK-FTFFHIR-MSFLSSCFTCHGF 1871 MKK SV+ G FPSPG Y + + QKGWSSERV N RR +A+ + PF +GRTLPSKWEDAERWI SPV G G + QR+PKSKSGP+ PPGIA+YS SP+M++ DGG +G N MAGSPFS GV+ ADG+++H ++ G + CM ARS + G S + S DE L+ +KDA + R SRRDMATQMSP S++ S F P LP+ V + H SK +VR+VQ+D+R T+T SK+H +R K + + + + T + D+ E A +ISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQEMRS + + Q+ +TS K +F R M LS CFTCH F Sbjct: 177 MKKSSVATRKSGAFPSPGTPSYHHHHHSSAGMQKGWSSERVPLH---NNGGRRQGNAAGVLPFNNGRTLPSKWEDAERWIFSPVSGDGGVRQSIVPPQRKPKSKSGPLGPPGIAYYSLYSPAMHMFDGGHTG---NFMAGSPFSAGVIAADGLAIHS----SSHGGGFAARTEPCM-------ARSVSVHGCSEVVTPPSFPSQDADENLETVKDAATDISRTVSRRDMATQMSPQGSTNSSPKGRP--FSPLTPSALPIMEV-QSIHSSKSEVRDVQVDERVTMTRWSKKHRARNSGKSSEIVDDWRKRAVDTRTSTWDVTETAKNISKIKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQEMRSLMLANQAHQVTRTSHKALSFSRTRQMGSLSGCFTCHAF 581
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2URH4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212800 PE=4 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.944e-98 Identity = 209/437 (47.83%), Postives = 266/437 (60.87%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPP--------------PILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSP-KFTFFHIR-MSFLSSCFTCHGF 1871 +KK SV LG FPSPG +Y N +V QKGWSSERVA +SNG RR +AS L F +GRTLPSKWEDAERWI SPV G SK H QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MAGSPFS GV+ ADG++VH + + G VQ++ + RS + G ++ PSSQ+E LD +KDA + + SRRDMATQMSP +S+ HS P PI+ L ++ H SK +R+V +D+R T+T SK+H +R K + + + T + D+ E SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQ+MR+S+ + Q+ KTS +F R MS LS CFTC F Sbjct: 177 VKKSSVVTRKLGAFPSPGTPNYHHNSSVGMQKGWSSERVA--LHSNGG-RRQGNASGLLAFNNGRTLPSKWEDAERWIFSPVSGDAGSKQSIVHPQRRPKSKSGPLGPPGIAYYSLYSPALQMFDGGHMG---NFMAGSPFSAGVIAADGLTVH-----SRSHGGGF------AVQTEPCMGRSVSVHG----CSEAANPPSSQEENLDVVKDAATDISQTVSRRDMATQMSPQSST------------HSSPKGRPSFSPSSPSALPIMELQSI----HGSKSLLRDVPVDERVTLTRWSKKHRARNTGKSSEIVDDWRKKVVDTCTSTWDVTETGKSISKMKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQDMRNSMLANQAHQVTKTSHMAISFRRTRQMSSLSGCFTCQAF 576
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2S5K4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212800 PE=4 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.982e-98 Identity = 205/437 (46.91%), Postives = 261/437 (59.73%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPP--------------PILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSP-KFTFFHIR-MSFLSSCFTCHGF 1871 +KK SV LG FPSPG +Y N +V QKGWSSERVA +SNG RR +AS L F +GRTLPSKWEDAERWI SPV G SK H QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MAGSPFS GV+ ADG++VH + + G VQ++ + RS + G + +E LD +KDA + + SRRDMATQMSP +S+ HS P PI+ L ++ H SK +R+V +D+R T+T SK+H +R K + + + T + D+ E SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SMDKI+ KLR+AQ +AQ+MR+S+ + Q+ KTS +F R MS LS CFTC F Sbjct: 174 VKKSSVVTRKLGAFPSPGTPNYHHNSSVGMQKGWSSERVA--LHSNGG-RRQGNASGLLAFNNGRTLPSKWEDAERWIFSPVSGDAGSKQSIVHPQRRPKSKSGPLGPPGIAYYSLYSPALQMFDGGHMG---NFMAGSPFSAGVIAADGLTVH-----SRSHGGGF------AVQTEPCMGRSVSVHG--CSEAANPPSSQDAEENLDVVKDAATDISQTVSRRDMATQMSPQSST------------HSSPKGRPSFSPSSPSALPIMELQSI----HGSKSLLRDVPVDERVTLTRWSKKHRARNTGKSSEIVDDWRKKVVDTCTSTWDVTETGKSISKMKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQKRAQDMRNSMLANQAHQVTKTSHMAISFRRTRQMSSLSGCFTCQAF 575
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: W9SYA1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009552 PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.086e-97 Identity = 207/426 (48.59%), Postives = 268/426 (62.91%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXK-LDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPS-KLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPK--FTFFHIR-MSFLSSCFTCHGF 1871 +KK S++ G FPSPG +YR + +V QKGWSSERV +N+ R H +A L PF SG+TLPSKWEDAERWI SPV G G ++ QRRPKSKSGP+ PPGIA+YS SP++ + DGG G N MA SPFS GV+ ADG LG + G + V+++ +ARS + G S L S + LD +KDA + R SRRDMATQMSPD S+ S + S P ILP+ ++ PS KL+VR+VQ+D+R T+T SK+H SR KG FE + + + + D+++ A SISK++REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS+SM+KI++KLR+AQ +AQEMRSS + Q+ ++S +F R MS LS CFTCH F Sbjct: 170 IKKASLTSRRSGNFPSPGTPNYR-HASVGMQKGWSSERVPLHSNAG---RTHANAL-LLPFNSGKTLPSKWEDAERWIFSPV-GDGAVRSSYQQPQRRPKSKSGPLGPPGIAYYSLYSPAIQMFDGGSVG---NFMAASPFSAGVIAADG-----LGIQTNGHGG------AFPVRTEPCMARSVSVHGCSEMLTQSSVPVPEGTNENLDGVKDAATNVSRAVSRRDMATQMSPDGSTHSSPKTGP--YSDSTPSILPI--LELESAPSCKLEVRDVQVDERVTMTRWSKKHRSRIPVKGSEIFENWKKKDGDARSPAWDLSDTAKSISKVKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMNKIMKKLRSAQKRAQEMRSSAIANQAHQVTRSSSHKAVSFRRTRQMSSLSGCFTCHAF 571 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094670 ID=g.barbadense_cottongen_reftransV1_0094670; Name=g.barbadense_cottongen_reftransV1_0094670; organism=Gossypium barbadense; type=contig; length=2299bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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