g.barbadense_cottongen_reftransV1_0094656, g.barbadense_cottongen_reftransV1_0094656 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: B9GSJ4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s04960g PE=4 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 3.956e-108 Identity = 130/201 (64.68%), Postives = 164/201 (81.59%), Query Frame = -3 Query: 329 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSY 931 +FVK S+ + + +YNK+ +TP+ IFTETHK LVK G WLT TSESCS+VAALIATVAFATS+T+PGGV E +G+P+LE +PAF +F I+SLIALCFSVT++V FLAILTSR++E+DF LP +L++GLT+LF SI ++LVSFC GHFF L+D LK+AA P+Y VTCLPV+FFA+AQ PLYFDL A K +PQRSY Sbjct: 285 EFVKDSMPPNFFV--RYNKEGKTPRDIFTETHKDLVKSGGEWLTNTSESCSVVAALIATVAFATSSTVPGGVNEITGSPILEYQPAFKMFAISSLIALCFSVTSVVMFLAILTSRYQERDFGQDLPRKLLVGLTSLFISIASVLVSFCTGHFFVLRDELKYAAFPVYAVTCLPVTFFAVAQFPLYFDLTWATFKKVPQRSY 483 HSP 2 Score: 144.821 bits (364), Expect = 3.956e-108 Identity = 64/106 (60.38%), Postives = 88/106 (83.02%), Query Frame = -2 Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLIN-RETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319 ETP LIAAK GI EMVE I++KFPV+I D++A+ KN++LL+VENRQ H +QFL++ + + ESIFR+ D +GN+ALHLAA G+++PW IPG+ALQMQWE+KW++ Sbjct: 180 ETPILIAAKNGIVEMVEKIIEKFPVAINDVNAEKKNIVLLSVENRQPHVYQFLLSLKRNIVKESIFRQVDSKGNSALHLAATLGDFKPWSIPGAALQMQWEIKWFE 285
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: B9RWH7_RICCO (Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1019530 PE=4 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 5.980e-108 Identity = 138/202 (68.32%), Postives = 165/202 (81.68%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 +FVK S+ H + K+N + QTPK+IF THK LV GS WLTKTSESCS+VAAL+ATVAFATSATIPGGV +G P+LE+EPAF VF IASL+ALCFSVTA++FFL ILTSR++E DFA LP +L +GLT+LFTSI +IL+SFCAGHFF LK+ L+ AA P+Y TCLP+SFFAL+QLPLYFDL RAI+ D PQRSYK Sbjct: 583 KFVKNSMPPHFFV--KHNSQGQTPKEIFIVTHKELVAKGSEWLTKTSESCSVVAALVATVAFATSATIPGGVNPENGAPILENEPAFEVFAIASLVALCFSVTAVIFFLTILTSRYQENDFAMDLPRKLFLGLTSLFTSIASILLSFCAGHFFVLKESLRTAAYPLYAATCLPISFFALSQLPLYFDLGRAILLDEPQRSYK 782 HSP 2 Score: 160.999 bits (406), Expect = 5.980e-108 Identity = 123/301 (40.86%), Postives = 166/301 (55.15%), Query Frame = -2 Query: 1005 KQRYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERETDIHFD-PRITGE-----AQGEEAETDKRKGTCLQQHQHANLGQKSLSAGTQHNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPMESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1889 K+R+ PPNY + I KF N LL++LG G RIK + KKERH A Q++NELV+ A Y + + P+ G+ A +E DK Q +H LS T + E + G + K G V + L Y + S K V +AFEK K ++ ETP L+AAK+GITE+V+ ILD +P++IQDLD+D KN +LLAVE+RQT + L+ R + ES+FR+ D GN+ALHLAAK G+YRP L+PG+ALQMQWE+KWYK Sbjct: 312 KRRFYPPNYETSIQLFKFMANALLVILGFGSSRIKNVRAKKERHIWATQLLNELVQRASSYTYENDGRNPRNSWPKRDGDPSEFLAAPHISEVDK----LTQSKEHI-----GLSCPTTNQEIR-----------------RENHGRAAKLGVAEV--VNESLDAYPTAVQELNTSQKNLVLLAFEKKETQKFRKKETPILVAAKVGITEIVDKILDTYPLAIQDLDSDEKNAVLLAVEHRQTDVYNLLLKRAM-VKESVFRQLDKHGNSALHLAAKLGDYRPKLVPGAALQMQWEIKWYK 583
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: M5Y0L5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014745mg PE=4 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 3.492e-107 Identity = 126/194 (64.95%), Postives = 159/194 (81.96%), Query Frame = -3 Query: 350 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIK 931 +FVK S+ + +YNKK QTPK+IF TH+ L+K+GS WLTKTSESCS+VAALIATVAFATSAT+PGG+ E +G P+L+DE AF F I+SL ALCFSVT+LVFFL+ILTSR+EE+DF+ LP +L++GLT+LF SI ++LVSFC GH F LK +L++ A P+Y CLPV+FFALAQLPLYFDL+RAII+ Sbjct: 306 KFVKSSMPHGFFV--RYNKKGQTPKEIFINTHRNLIKEGSKWLTKTSESCSVVAALIATVAFATSATVPGGLNENTGEPILKDESAFGAFTISSLTALCFSVTSLVFFLSILTSRYEERDFSMDLPRKLLLGLTSLFASIASMLVSFCTGHIFVLKHQLRYVAYPLYAAACLPVTFFALAQLPLYFDLMRAIIR 497 HSP 2 Score: 151.369 bits (381), Expect = 3.492e-107 Identity = 67/98 (68.37%), Postives = 84/98 (85.71%), Query Frame = -2 Query: 1005 AKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1298 +KMG+TEMV +ILDKFPV+IQD+D+D KNV+LLAVENRQ H + L R+ L ES+ R+ D+QGN+ALHLAA+ G+YRPWLIPG+ALQMQWE+KWYK Sbjct: 210 SKMGVTEMVRTILDKFPVAIQDVDSDNKNVVLLAVENRQPHVYNLLRKRKI-LKESLLRQLDNQGNSALHLAARCGQYRPWLIPGAALQMQWEIKWYK 306
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A068U691_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_11 OS=Coffea canephora GN=GSCOC_T00016106001 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 4.402e-107 Identity = 130/202 (64.36%), Postives = 164/202 (81.19%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 ++VK+S+ +H + NK+ + PK +FTETH+ LVK G WLT TS+SCS+VAALIATVAFATS T+PGGVK+ GTP LE+EPAF F I+SL+ALCFSVT+LV FLAILTSR++EKDF LP +L++GLT+LF SI +IL+SFC+GHFF LKD+LKFAA P+Y VTCLPV+ FA+AQ PLYFDL+ A I +PQRSY+ Sbjct: 419 EYVKKSMPQHF--FARVNKEGRIPKDVFTETHQELVKSGGQWLTNTSQSCSVVAALIATVAFATSTTVPGGVKQDIGTPTLENEPAFDCFAISSLVALCFSVTSLVMFLAILTSRYQEKDFGTSLPSKLLLGLTSLFVSIASILISFCSGHFFVLKDKLKFAAFPVYAVTCLPVTLFAIAQFPLYFDLIWATIHKVPQRSYR 618 HSP 2 Score: 142.895 bits (359), Expect = 4.402e-107 Identity = 65/105 (61.90%), Postives = 84/105 (80.00%), Query Frame = -2 Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319 ETP LIAAK G+ EMV IL FPV++ D+++D KNV+LLAVENRQ + ++ L++ + + +SIFRK D GN ALHLAA+ GEYRPWLIPG+ALQMQWE+KWY+ Sbjct: 316 ETPILIAAKNGVVEMVYKILQLFPVAVHDMNSDKKNVVLLAVENRQPYVYRLLLDMKI-MRDSIFRKVDKDGNTALHLAARLGEYRPWLIPGAALQMQWEIKWYE 419
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: M5XNL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026213mg PE=4 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.309e-106 Identity = 123/206 (59.71%), Postives = 162/206 (78.64%), Query Frame = -3 Query: 314 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ 931 +FVK S+ + +YNK Q P++IFT +HK L K+GS WL KTSESCS+VAALIATVAFATSA++PGG+ + +G+PV +D+PAF+ F I+SL+ALC SVTALVFFL+I+TSR+E DF+ LP +L++GLT+LF SITA+LVSFC GH F L +L++ A P+Y TCLPV+ FALAQL LY+DL+R I + +PQRSYKE+ Sbjct: 324 KFVKESLPPRASV--RYNKAGQIPQEIFTTSHKDLRKEGSNWLVKTSESCSVVAALIATVAFATSASVPGGLDDKTGSPVFKDKPAFNAFTISSLLALCLSVTALVFFLSIITSRYEAHDFSISLPRKLLLGLTSLFASITAVLVSFCTGHIFLLDRQLRYVAYPLYAATCLPVTIFALAQLSLYYDLIRVIFRKVPQRSYKEYRH 527 HSP 2 Score: 150.599 bits (379), Expect = 9.309e-106 Identity = 68/105 (64.76%), Postives = 87/105 (82.86%), Query Frame = -2 Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319 +TP LIAAKMG++EMVE IL+KFPV+I+D+D++ KNV LLAVENRQ H ++FL++ + S+ R+ D+ GNNALHLAAK G +RPWL PG+ALQMQWELKWYK Sbjct: 222 QTPILIAAKMGVSEMVEKILEKFPVAIEDVDSENKNVALLAVENRQPHVYRFLVHSKKI--TSLLRQVDNNGNNALHLAAKCGGHRPWLTPGAALQMQWELKWYK 324
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A0B2ST21_GLYSO (NF-kappa-B inhibitor cactus OS=Glycine soja GN=glysoja_020250 PE=4 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.135e-104 Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = -3 Query: 326 FVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 928 FVK S+ H HY N +N+TP+ IF+ETHK LV+ G WL KT+ESCSLVAALIATVAF+TS +PG K+ +G+P LE+ P F F IASLIALC SVT+LV FL+ILTSR++E+DF LP +LI+GLT+LF SIT+++V FCAGHFF LKD+LK A P+Y VTCLPV+ FALAQ PLY DL A K +PQR YK Sbjct: 511 FVKGSMQPHFFSHY--NNENKTPRDIFSETHKDLVRSGGEWLKKTAESCSLVAALIATVAFSTSTNVPGDFKDDTGSPTLEERPEFKAFAIASLIALCCSVTSLVLFLSILTSRYQERDFGKNLPRKLILGLTSLFMSITSMMVCFCAGHFFVLKDKLKSVAFPVYAVTCLPVTLFALAQFPLYIDLTWATFKKVPQRGYK 709 HSP 2 Score: 149.828 bits (377), Expect = 1.135e-104 Identity = 69/118 (58.47%), Postives = 90/118 (76.27%), Query Frame = -2 Query: 1008 EKNVILKQKET---ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWY 1352 EKN + KE ETP LIAAK G+TEMV I+D FPV++ D+DA KN++LLAVENRQT+ + FL++++ +IF K D++GN+ALHLAAK G+Y+PWLIPG ALQM WE+KWY Sbjct: 392 EKNEKISTKEKKVLETPILIAAKNGVTEMVAKIMDSFPVAVHDMDAKKKNIVLLAVENRQTYLYNFLLSKKNLKESNIFEKVDNEGNSALHLAAKLGDYKPWLIPGEALQMHWEIKWY 509
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: W9RCF7_9ROSA (Death-associated protein kinase 1 OS=Morus notabilis GN=L484_002358 PE=4 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 1.456e-104 Identity = 131/202 (64.85%), Postives = 163/202 (80.69%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 +FVKRS+ + + +YN ++T K IFTETH LVK G WLT TSESCS+VAALIATVAFATS T+PGG E SG P LE++PAF VF I+SLIALCFSVT++V FLAILTSR++EKDF+ LP +L++GLT+LF SI ++L+SFCAGHFF L+D+L++AA P+Y VTCLP+SFFALAQ PLYFDL+ K +PQRSYK Sbjct: 548 EFVKRSVQPNFFV--RYNNDHKTAKDIFTETHTELVKAGGEWLTNTSESCSVVAALIATVAFATSTTVPGGNNEESGKPTLEEKPAFEVFAISSLIALCFSVTSVVMFLAILTSRYQEKDFSKDLPRKLLVGLTSLFVSIASMLISFCAGHFFVLQDKLQYAAFPVYAVTCLPISFFALAQFPLYFDLIWTNFKKVPQRSYK 747 HSP 2 Score: 135.191 bits (339), Expect = 1.456e-104 Identity = 61/105 (58.10%), Postives = 85/105 (80.95%), Query Frame = -2 Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319 ET L+AAK G+TE+VE IL+ FPV+I D++A+ KN++LLAVE+RQ H ++ L+ R L +S+F++ D +GN+ALHLAA G Y+PWLIPG+ALQMQWE+KWY+ Sbjct: 445 ETAILLAAKNGVTEVVEKILELFPVAIHDMNAEEKNIVLLAVEHRQPHVYKLLLKRNI-LKDSVFQQVDDKGNSALHLAAMLGGYKPWLIPGAALQMQWEIKWYE 548
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A067DBY3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039657mg PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.514e-104 Identity = 135/202 (66.83%), Postives = 166/202 (82.18%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 QFVK+S+ +H ++N +TPK++FTETHK LVK+G WL KTSESCS+VAALIATVAFATSAT+PGGV + SG P+ E+EP F++F I+SL+ALCFSVTALVFFL ILTSR++EKDF LP +L++GLT LFTSI AIL+SFC+GH F LKD ++ AA PIY TCLP++FFALAQLPLYFDL+ AI K +PQRSYK Sbjct: 304 QFVKKSMPRHF--FTRFNDNGKTPKEVFTETHKDLVKEGKEWLPKTSESCSVVAALIATVAFATSATVPGGVDQESGKPIFENEPVFNIFSISSLVALCFSVTALVFFLTILTSRYQEKDFVKDLPRKLLLGLTTLFTSIAAILISFCSGHSFMLKDEMRSAAYPIYAATCLPMTFFALAQLPLYFDLIWAIFKKVPQRSYK 503 HSP 2 Score: 140.198 bits (352), Expect = 5.514e-104 Identity = 116/300 (38.67%), Postives = 151/300 (50.33%), Query Frame = -2 Query: 1005 PPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERETDIHFDPRITGEAQGEEA----ETDKRKGTCLQQHQ-----HANLGQKSLSAGTQHNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPM-ESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1874 PPNYA+ +L K + +LIVLG G RI I KKERHT A+QVM ELV+ A YK+ + R +G + EEA ET T HQ H + S +GT+ + I + + V M + FLK Y + + S K V + FEK + ETP LIAA+MG+TEMVE ILD FP + Q L+NR+ L ESIFR+ D QGN+ALHLAAK+G++RPWL+PG+ALQMQWE+KWY+ Sbjct: 54 PPNYATCVLLFKVMMKAMLIVLGLGIWRINHITEKKERHTWAIQVMCELVQHASLYKYEDNGPK----RRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSAQSGTEKMDNKI-----------------------LLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQILDTFPAN---------------------QYLQALLNRKI-LGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQ 304
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: M5W669_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027227mg PE=4 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 1.556e-103 Identity = 126/204 (61.76%), Postives = 162/204 (79.41%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 +FVK S+ P ++ ++NK+++T + IFTETH V+ G WL TS+SCS+VAALIATVAFATS T+PGG+K+ SG P LE++PAF F IASL+ALCFSVT++V FL+ILTSR++EKDF LP +L++GLT+LF SI ++LVSF AGHFF LKD+LK+AA P+Y VTCLPV+FFA+AQ PLY DLL A K +PQRSYK Sbjct: 500 EFVKASV----PPNFFSRHNKQSKTARDIFTETHAKEVEAGGQWLNSTSKSCSVVAALIATVAFATSTTVPGGMKQDSGEPTLENQPAFEAFAIASLVALCFSVTSMVMFLSILTSRYQEKDFGKDLPRKLLLGLTSLFVSIASMLVSFSAGHFFVLKDKLKYAAFPVYAVTCLPVTFFAMAQFPLYVDLLWATYKKVPQRSYK 699 HSP 2 Score: 145.206 bits (365), Expect = 1.556e-103 Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = -2 Query: 1005 AFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1358 A E + K ETP LIAAK G+TEMVE IL+ FPV+I D++A+ KN++LLAVENRQ H + L+ RE L S+ K D +GN+ALHLAAK GE++PWLIPG+ALQMQWE+KWY+ Sbjct: 384 AIEMKTHREMKIMETPILIAAKNGVTEMVEKILELFPVAIHDMNAEKKNMVLLAVENRQPHVYNLLLKREN-LRNSLLCKVDDKGNSALHLAAKLGEHKPWLIPGAALQMQWEIKWYE 500
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: M5VTT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020919mg PE=4 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.901e-102 Identity = 127/204 (62.25%), Postives = 165/204 (80.88%), Query Frame = -3 Query: 326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931 ++VK S +P+H+ ++N+ QT + +FTE+HK +VKDG WLT TSESCS+VAALIATVAFAT+ T+PGG+KE SG P LE++PAF VF IASL+ALCFSVTA+V FL+ILTSR++EKDF LP +L++GLT+LF SI ++LVSFCAGHFF LKD+LK+A P+Y +TCLPV+FFA+ Q PLY DL+ A K +P+RSYK Sbjct: 494 EYVKNS----MPLHFFARHNRIGQTARDLFTESHKNIVKDGGQWLTNTSESCSVVAALIATVAFATATTVPGGIKEDSGKPTLENQPAFDVFAIASLVALCFSVTAMVMFLSILTSRYQEKDFGKGLPRKLLVGLTSLFVSIASMLVSFCAGHFFVLKDKLKYAVFPVYALTCLPVTFFAMVQFPLYVDLIWATFKKVPRRSYK 693 HSP 2 Score: 147.132 bits (370), Expect = 2.901e-102 Identity = 71/118 (60.17%), Postives = 89/118 (75.42%), Query Frame = -2 Query: 1005 AFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1358 A EK + + ETP LIAAK G+TEMVE IL+ FPV+I D + + KNV+LLAVENRQ H +Q L+ R L +S+F K D QGN+ALHLAAK E++PWLIPG+ALQMQWE+KWY+ Sbjct: 378 ATEKKTVKLLAKKETPILIAAKSGVTEMVEKILELFPVAIHDTNTEKKNVVLLAVENRQPHVYQLLLKRNV-LKDSVFGKVDDQGNSALHLAAKLEEHKPWLIPGAALQMQWEIKWYE 494 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094656 ID=g.barbadense_cottongen_reftransV1_0094656; Name=g.barbadense_cottongen_reftransV1_0094656; organism=Gossypium barbadense; type=contig; length=1998bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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