g.barbadense_cottongen_reftransV1_0094655, g.barbadense_cottongen_reftransV1_0094655 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094655
Unique Name	g.barbadense_cottongen_reftransV1_0094655
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2919

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy Swiss-Prot
Match: YCV6_SCHPO (Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.510e-23
Identity = 56/137 (40.88%), Postives = 85/137 (62.04%), Query Frame = -1

Query:  799 RIRTIDAVIITHSHADAIGGLDDLRDWT-NNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQ-EEPFIVHDLQI--TPLPVWHG---------RGYRSLGFRFGDICYISDVSDIPEETYPLL 1170
            +IR +DAVI+TH HADAI G+DDLR+WT   +QP + IY+ ER ++V++++  Y+V+      G +V    F++   ++PF + D+ I  TPLPV HG         + Y  +GFR GD+ YISD + +P  T  L+
Sbjct:   88 KIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKIYLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHGVYFIEGKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLM 224

HSP 2 Score: 63.929 bits (154), Expect = 1.882e-9
Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = -3

Query: 2186 SEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEP-GNINRRRNTSLLIHYGRPSGR--CNILIDAGKFFYHSALQWFPE 2419
            S+++F+GTG S GIP V CLT     C  C  +  P G  N R NTS+L+     SG    NILID GK FY SAL+ F E
Sbjct:    6 SKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRPKNILIDCGKHFYVSALKHFVE 86

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy Swiss-Prot
Match: LIPB_PORGI (Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.206e-10
Identity = 47/168 (27.98%), Postives = 84/168 (50.00%), Query Frame = -1

Query:  790 RSLSKKDQWRNVFLIILWYICR---LSCIFVVVTSCICVRIRTIDAVIITHSHADAIGGLDDLRD--WTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNC 1278
            RS  + D+     L+I+    +   + C        +   I ++DAV++TH H D +GGLDDLR   W      ++++Y  +   + ++   +Y+   +   PG  + KL   +  + PF V DL + PL + HGR    LG++ G++ +++D+ DI  E    L +C
Sbjct:   25 RSEDRHDKRTRTSLLIITDAGKRILIDCSPDFRQQALFAGIDSLDAVLLTHEHFDHVGGLDDLRTICWHR----ELAVYAEQNVLDSIRDRLHYVFRKNP-YPGTPLLKL-CEVKPDMPFQVADLTVEPLRIMHGR-LPILGYKIGEMAFLTDMKDIAAEEIECLKSC 185

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: D7U014_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02310 PE=4 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.207e-70
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA RDFEVMKKTHYYLVDTSVIIPGAAVS+LQFNII EEPFIVHDL++ PLPVWHG GYRSLGFRFG+ICYISDVS+IPEETYPLL NCE
Sbjct:  148 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAPRDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIIHEEPFIVHDLKVIPLPVWHGPGYRSLGFRFGNICYISDVSEIPEETYPLLKNCE 274

HSP 2 Score: 44.2838 bits (103), Expect = 1.207e-70
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSS+THFGLPR 
Sbjct:  273 CEILVLDALRPDRSSATHFGLPRA 296

HSP 3 Score: 31.187 bits (69), Expect = 1.207e-70
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            +EVRKI+PKRTLFTG
Sbjct:  298 DEVRKIQPKRTLFTG 312

HSP 4 Score: 178.333 bits (451), Expect = 1.726e-45
Identity = 93/148 (62.84%), Postives = 112/148 (75.68%), Query Frame = -3

Query: 2177 MVPFLGTVRSTPS-LTSLAPYKRQISIRISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            MVPFLG++R+ PS +T  +PYKR+I      +S  R G  PF+R  +ACL+S SA  +TR  LP E SEIIF+GTGTSEGIPRVSCLT+P+K CLVCSKAA+P + NRR NTS+LI Y   SG C ILID GKFFYHSAL+WFP FG+
Sbjct:    1 MVPFLGSIRANPSSITCFSPYKRRIFFDKPAISVSRYGSSPFQRLFRACLESDSAKGNTRVQLPVEQSEIIFLGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSSKNRRLNTSILIRYPSSSGGCTILIDVGKFFYHSALRWFPTFGI 148

HSP 5 Score: 71.633 bits (174), Expect = 7.257e-10
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHEKVSE LE L +TEGLDVQLSYDGLR+PV+L
Sbjct:  310 FTGMMHLMDHEKVSEDLEKLKKTEGLDVQLSYDGLRVPVTL 350

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: A0A059BUX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03136 PE=4 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.459e-70
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA RDFEVMKKTHYYLVDTS IIPGAAVS+LQFNI+QEEPF+V+DLQITPLPVWHG+GYRSLGFRFG +CYISDVS+IPEETYPLL +C+
Sbjct:  147 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVANRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIMQEEPFVVNDLQITPLPVWHGQGYRSLGFRFGKVCYISDVSEIPEETYPLLRDCD 273

HSP 2 Score: 45.0542 bits (105), Expect = 1.459e-70
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C +L  DALRPDRSSSTHFGLPR 
Sbjct:  272 CDILIMDALRPDRSSSTHFGLPRA 295

HSP 3 Score: 32.3426 bits (72), Expect = 1.459e-70
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            EEVRKI+PKRTLFTG
Sbjct:  297 EEVRKIQPKRTLFTG 311

HSP 4 Score: 151.754 bits (382), Expect = 3.080e-36
Identity = 84/147 (57.14%), Postives = 96/147 (65.31%), Query Frame = -3

Query: 2177 MVPFLGTVRSTPSLTSLAPYKRQISIRISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            M  FLG VR  PS   LAPY R+  +    VS  R G  P R   +A L SS+             SEIIF+GTGTSEGIPRVSCLT+  KKC VCSKA  PGN NRR NTS+LI Y  P+G+CNILIDAGKFFY SAL+WFP +G+
Sbjct:    1 MAAFLGAVRCAPSAARLAPYGRRFRVSGPAVSLSRRGSSPLRLHSRASLNSSAEDAGGIGRGGESDSEIIFMGTGTSEGIPRVSCLTNSSKKCPVCSKAIVPGNKNRRLNTSILIRYPGPTGKCNILIDAGKFFYQSALRWFPAYGI 147

HSP 5 Score: 66.6254 bits (161), Expect = 3.438e-8
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = -3

Query:  215 FYGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 340
             + GMMHLMDHE V+E L+ L+ETEG+DVQLSYDGLRIP+ L
Sbjct:  308 LFTGMMHLMDHEAVNEDLKKLLETEGIDVQLSYDGLRIPIML 349

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: B9SN26_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0311410 PE=4 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.736e-70
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            +RTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVAERDFEVMKKTHYYLVDTSVIIPGAAVS+LQFNI+ EEPFIV DL+ITPLPVWHG GYRSLGFRFG ICYISDVSDIPEETYPLL +CE
Sbjct:  144 LRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIMHEEPFIVCDLKITPLPVWHGPGYRSLGFRFGKICYISDVSDIPEETYPLLKDCE 270

HSP 2 Score: 45.8246 bits (107), Expect = 1.736e-70
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSSSTHFGLPR 
Sbjct:  269 CEILILDALRPDRSSSTHFGLPRA 292

HSP 3 Score: 31.187 bits (69), Expect = 1.736e-70
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            +EVRKI+PKRTLFTG
Sbjct:  294 DEVRKIQPKRTLFTG 308

HSP 4 Score: 145.976 bits (367), Expect = 2.640e-34
Identity = 69/102 (67.65%), Postives = 78/102 (76.47%), Query Frame = -3

Query: 2177 QACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2482
            +A L  +    +    LP + SEIIF+GTGTSEGIPRVSCLT+P+KKC VCSKA EPGN NRR NT LLI Y  P+G  NILIDAGKFFYHSAL+WFP FGL
Sbjct:   43 EAQLLIADTNGNADPELPTDQSEIIFMGTGTSEGIPRVSCLTNPLKKCPVCSKAVEPGNKNRRLNTGLLIRYAGPAGTQNILIDAGKFFYHSALRWFPTFGL 144

HSP 5 Score: 72.4034 bits (176), Expect = 3.490e-10
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHEKV+EYL  LME+EGLDVQLSYDGLR+PV+L
Sbjct:  306 FTGMMHLMDHEKVNEYLLKLMESEGLDVQLSYDGLRVPVTL 346

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: A0A068TNJ1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora GN=GSCOC_T00021848001 PE=4 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.708e-70
Identity = 112/127 (88.19%), Postives = 120/127 (94.49%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            +RTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA RDFEVMKKTHYYLVDTSVI+PGAAVS+LQFNII EEPFIVHDL+ TPLPVWHG+ YRSLGFRFG+ICYISDVS+IPEETYPLL +CE
Sbjct:  155 VRTIDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAMRDFEVMKKTHYYLVDTSVIVPGAAVSELQFNIIHEEPFIVHDLKFTPLPVWHGKNYRSLGFRFGNICYISDVSEIPEETYPLLEDCE 281

HSP 2 Score: 45.0542 bits (105), Expect = 3.708e-70
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSSSTHFGLPR 
Sbjct:  280 CELLILDALRPDRSSSTHFGLPRA 303

HSP 3 Score: 30.0314 bits (66), Expect = 3.708e-70
Identity = 12/15 (80.00%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            +EVRKI+P+RTLFTG
Sbjct:  305 DEVRKIQPRRTLFTG 319

HSP 4 Score: 151.754 bits (382), Expect = 3.091e-36
Identity = 92/155 (59.35%), Postives = 110/155 (70.97%), Query Frame = -3

Query: 2177 MVPFLGTV---RSTP-SLTSLAPYKRQIS-IRISPVSXXXXXXXXXXXFLQACLQS---SSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            MV FLG     R+ P SL S+    R+IS ++ + +SF RNGF  F  FL+A L S   S AT      +  E  E++F+GTGTSEGIPRVSCLT+P K C VC++AAEPGN NRR NTSLLI Y RPSG+CNILIDAGKFFYHSAL+WFP FG+
Sbjct:    1 MVGFLGMTARPRTAPTSLASVTRSTRRISCVKNTSISFSRNGFSRFHHFLRASLHSTPPSPATSKAALQILPEQPEVVFVGTGTSEGIPRVSCLTNPTKTCPVCAQAAEPGNRNRRLNTSLLIRYPRPSGKCNILIDAGKFFYHSALRWFPTFGV 155

HSP 5 Score: 68.1662 bits (165), Expect = 1.000e-8
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHEKV+E L  L ETEGLD+QLSYDGLR+PV+L
Sbjct:  317 FTGMMHLMDHEKVNEDLRKLRETEGLDMQLSYDGLRVPVNL 357

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: M0ZR92_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002494 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.087e-70
Identity = 109/127 (85.83%), Postives = 118/127 (92.91%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRTIDAVIITHSHADAIGG+DDLRDWTNNVQP I IYVA RDFEVMKKTHYYL+D S IIPGAAVS+LQFNII+E+PFIVHDL++ PLPVWHG GYRSLGFRFG+ CYISDVSDIPEETYPLL +CE
Sbjct:  149 IRTIDAVIITHSHADAIGGMDDLRDWTNNVQPSIPIYVASRDFEVMKKTHYYLIDKSDIIPGAAVSELQFNIIKEDPFIVHDLKVIPLPVWHGSGYRSLGFRFGNTCYISDVSDIPEETYPLLQDCE 275

HSP 2 Score: 45.0542 bits (105), Expect = 6.087e-70
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSS+THFGLPR 
Sbjct:  274 CELLIMDALRPDRSSATHFGLPRA 297

HSP 3 Score: 33.4982 bits (75), Expect = 6.087e-70
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            EEVRKIKPKRTLFTG
Sbjct:  299 EEVRKIKPKRTLFTG 313

HSP 4 Score: 148.673 bits (374), Expect = 3.084e-35
Identity = 82/149 (55.03%), Postives = 101/149 (67.79%), Query Frame = -3

Query: 2177 MVPFLGTVRS-TPSLTSLAPYKRQISI-RISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            M  FLG VR  + SL S+  + RQ S    + +S  R  F  F+  + A L SSSA       + A  SE++F+GTGTSEGIPRVSCLT+P+K C VCSKAAEPG+ NRR NTS+LI + RPSG  N LID GKFFYHSA+QWFP +G+
Sbjct:    1 MAVFLGIVRPPSHSLFSITRFTRQFSFTNNNSISISRKSFSRFKPIVTASLHSSSANSQNGAEVSANQSELMFLGTGTSEGIPRVSCLTNPLKTCPVCSKAAEPGSRNRRLNTSILIRHSRPSGNRNFLIDVGKFFYHSAMQWFPAYGI 149

HSP 5 Score: 67.0106 bits (162), Expect = 2.129e-8
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHE V+E L  L ETEG+DVQLSYDGLR+PVSL
Sbjct:  311 FTGMMHLMDHEVVTERLLKLRETEGIDVQLSYDGLRVPVSL 351

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: A0A059BUH0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03136 PE=4 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.716e-70
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA RDFEVMKKTHYYLVDTS IIPGAAVS+LQFNI+QEEPF+V+DLQITPLPVWHG+GYRSLGFRFG +CYISDVS+IPEETYPLL +C+
Sbjct:  147 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVANRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIMQEEPFVVNDLQITPLPVWHGQGYRSLGFRFGKVCYISDVSEIPEETYPLLRDCD 273

HSP 2 Score: 45.0542 bits (105), Expect = 6.716e-70
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C +L  DALRPDRSSSTHFGLPR 
Sbjct:  272 CDILIMDALRPDRSSSTHFGLPRA 295

HSP 3 Score: 30.0314 bits (66), Expect = 6.716e-70
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -2

Query:  474 EEVRKIKPKRTLFT 515
            EEVRKI+PKRTLFT
Sbjct:  297 EEVRKIQPKRTLFT 310

HSP 4 Score: 151.754 bits (382), Expect = 3.844e-36
Identity = 84/147 (57.14%), Postives = 96/147 (65.31%), Query Frame = -3

Query: 2177 MVPFLGTVRSTPSLTSLAPYKRQISIRISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            M  FLG VR  PS   LAPY R+  +    VS  R G  P R   +A L SS+             SEIIF+GTGTSEGIPRVSCLT+  KKC VCSKA  PGN NRR NTS+LI Y  P+G+CNILIDAGKFFY SAL+WFP +G+
Sbjct:    1 MAAFLGAVRCAPSAARLAPYGRRFRVSGPAVSLSRRGSSPLRLHSRASLNSSAEDAGGIGRGGESDSEIIFMGTGTSEGIPRVSCLTNSSKKCPVCSKAIVPGNKNRRLNTSILIRYPGPTGKCNILIDAGKFFYQSALRWFPAYGI 147

HSP 5 Score: 65.4698 bits (158), Expect = 7.306e-8
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = -3

Query:  215 GMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 331
            GMMHLMDHE V+E L+ L+ETEG+DVQLSYDGLRIP+ L
Sbjct:  326 GMMHLMDHEAVNEDLKKLLETEGIDVQLSYDGLRIPIML 364

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: K4BMW6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g121670.2 PE=4 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.065e-69
Identity = 106/127 (83.46%), Postives = 118/127 (92.91%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRT+DAVIITHSHADAIGG+DDLRDWTNNVQP + IYVA RDFEVMKKTHYYL+D S IIPGAAVS+LQFNII+E+PF+VHDL++ PLPVWHG GYRSLGFRFG+ CYISDVSDIPEETYPLL +CE
Sbjct:  149 IRTLDAVIITHSHADAIGGMDDLRDWTNNVQPSVPIYVASRDFEVMKKTHYYLIDKSNIIPGAAVSELQFNIIKEDPFVVHDLKVIPLPVWHGSGYRSLGFRFGNTCYISDVSDIPEETYPLLQDCE 275

HSP 2 Score: 45.0542 bits (105), Expect = 2.065e-69
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSS+THFGLPR 
Sbjct:  274 CELLIMDALRPDRSSATHFGLPRA 297

HSP 3 Score: 33.4982 bits (75), Expect = 2.065e-69
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            EEVRKIKPKRTLFTG
Sbjct:  299 EEVRKIKPKRTLFTG 313

HSP 4 Score: 147.517 bits (371), Expect = 8.018e-35
Identity = 82/149 (55.03%), Postives = 100/149 (67.11%), Query Frame = -3

Query: 2177 MVPFLGTVRS-TPSLTSLAPYKRQISI-RISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            M  FLG VR  + SL S+  + RQ S    + +S  R  F  F+  + A L SSSA       +    SE+IF+GTGTSEGIPRVSCLT+PVK C VCSKAAEPG+ NRR NTS+LI + RPSG  N LID GKFFYHSA++WFP +G+
Sbjct:    1 MAVFLGIVRPPSHSLFSITRFTRQFSFTNNNSISISRKSFSRFKPIVTASLHSSSANSPNGAEISTNQSELIFLGTGTSEGIPRVSCLTNPVKTCPVCSKAAEPGSKNRRLNTSILIRHSRPSGNRNFLIDVGKFFYHSAMKWFPAYGI 149

HSP 5 Score: 67.0106 bits (162), Expect = 2.571e-8
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHE V+E L  L ETEG+DVQLSYDGLR+PVSL
Sbjct:  311 FTGMMHLMDHEVVTERLLKLRETEGVDVQLSYDGLRVPVSL 351

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: A0A067L8F4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24759 PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 7.369e-69
Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            +RTIDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA RDFEVMKKTHYYLVDTSVIIPGAAVS+LQFNII EEPF   DL+ TPLPVWHG GYRSLGFRFG+ICYISDVS+IPEETYPLL +CE
Sbjct:  158 LRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVARRDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIIHEEPFDACDLKFTPLPVWHGSGYRSLGFRFGNICYISDVSEIPEETYPLLKDCE 284

HSP 2 Score: 45.0542 bits (105), Expect = 7.369e-69
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = -3

Query:  602 CKMLSQDALRPDRSSSTHFGLPRV 673
            C++L  DALRPDRSSSTHFGLPR 
Sbjct:  283 CEILILDALRPDRSSSTHFGLPRA 306

HSP 3 Score: 32.3426 bits (72), Expect = 7.369e-69
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            +EVRKIKPKRTLFTG
Sbjct:  308 DEVRKIKPKRTLFTG 322

HSP 4 Score: 165.622 bits (418), Expect = 6.429e-41
Identity = 93/159 (58.49%), Postives = 113/159 (71.07%), Query Frame = -3

Query: 2177 MVPFLGTVRSTPSLT--SLAPYKRQISIR----------ISPVSXXXXXXXXXXXFLQACLQSSSATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2617
            MV FLG +R +PSL   S  P++RQ S +          +S  S  RNGF PF++ ++AC   S+A+ +     P + SEIIF+GTGTSEG+PRVSCLT+P+KKC VCSKA EPGN NRR NTSLLI Y  P G CNILIDAGKFFYHSAL+WFP+FGL
Sbjct:    1 MVQFLGAIRVSPSLALASFVPHRRQFSFQSSSLALSRNGLSSFSLSRNGFSPFKKIMRACF-ISNASGNADAQSPKDQSEIIFMGTGTSEGVPRVSCLTNPLKKCPVCSKAVEPGNKNRRLNTSLLIRYSGPGGICNILIDAGKFFYHSALRWFPDFGL 158

HSP 5 Score: 71.2478 bits (173), Expect = 9.767e-10
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDHEKV+EYL  L ETEGLDVQLSYDGLRIP +L
Sbjct:  320 FTGMMHLMDHEKVNEYLLKLKETEGLDVQLSYDGLRIPATL 360

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: A0A022Q4C7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009104mg PE=4 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 7.407e-69
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            IRTIDAVIITHSHADAIGGLDDLRDWTNNVQP + IY AERDFEVMKKTHYY++DTS + PGAAVS LQFNIIQE+PF+VHDLQ TPLPVWHGRGYRSLGFRFG+ICYISDVSDIPE+TYPLL NCE
Sbjct:  151 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPSVPIYTAERDFEVMKKTHYYIIDTSDVTPGAAVSDLQFNIIQEKPFLVHDLQFTPLPVWHGRGYRSLGFRFGNICYISDVSDIPEDTYPLLENCE 277

HSP 2 Score: 149.828 bits (377), Expect = 4.236e-36
Identity = 74/105 (70.48%), Postives = 85/105 (80.95%), Query Frame = -3

Query: 2177 LQACLQSSSA--TMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2485
            +QA L SSSA  ++  +EN+    SEIIFIGTGTSEGIPRVSCLT+P K C VCSKA EPGN NRR NTSLL+ + RPSG+CNILIDAGKFFYHSAL WFP +G+
Sbjct:   49 IQASLHSSSAGDSVGAKENV--GQSEIIFIGTGTSEGIPRVSCLTNPDKTCPVCSKAVEPGNKNRRLNTSLLVRFPRPSGKCNILIDAGKFFYHSALTWFPAYGI 151

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Match: M0SHV2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 7.630e-69
Identity = 108/127 (85.04%), Postives = 120/127 (94.49%), Query Frame = -1

Query:  787 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQPKISIYVAERDFEVMKKTHYYLVDTSVIIPGAAVSKLQFNIIQEEPFIVHDLQITPLPVWHGRGYRSLGFRFGDICYISDVSDIPEETYPLLGNCE 1167
            +R IDAVIITHSHADAIGGLDDLRDWTNNVQP I IYVA+RDFEVMKKTHYY+VDTSVI+PGAAVS+LQFN+I EEPF++HDL++TPLPVWHG GYRSLGFRFGDICYISDVSDIPEETY LL +C+
Sbjct:  109 LRHIDAVIITHSHADAIGGLDDLRDWTNNVQPFIPIYVAQRDFEVMKKTHYYIVDTSVIVPGAAVSELQFNVINEEPFVIHDLKVTPLPVWHGHGYRSLGFRFGDICYISDVSDIPEETYMLLKDCD 235

HSP 2 Score: 45.8246 bits (107), Expect = 7.630e-69
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = -3

Query:  602 YLIESICKMLSQDALRPDRSSSTHFGLPRV 691
            Y++   C +L  DALRPDRSSSTHFGLPR 
Sbjct:  228 YMLLKDCDLLILDALRPDRSSSTHFGLPRA 257

HSP 3 Score: 31.5722 bits (70), Expect = 7.630e-69
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = -2

Query:  471 EEVRKIKPKRTLFTG 515
            EEVRKI+P+RTLFTG
Sbjct:  259 EEVRKIQPRRTLFTG 273

HSP 4 Score: 137.887 bits (346), Expect = 7.561e-32
Identity = 65/94 (69.15%), Postives = 73/94 (77.66%), Query Frame = -3

Query: 2177 ATMDTRENLPAEHSEIIFIGTGTSEGIPRVSCLTDPVKKCLVCSKAAEPGNINRRRNTSLLIHYGRPSGRCNILIDAGKFFYHSALQWFPEFGL 2458
            A+ D +   P + SEIIFIGTGTSEGIPRVSCLT+  K C VCSKA EPGN NRR NTS+LI Y    GR NIL+DAGKFFYHSAL+WFP +GL
Sbjct:   16 ASRDAKIQAPEDQSEIIFIGTGTSEGIPRVSCLTNQSKTCKVCSKAIEPGNKNRRLNTSILIRYVNSVGRFNILVDAGKFFYHSALRWFPAYGL 109

HSP 5 Score: 63.5438 bits (153), Expect = 1.953e-7
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = -3

Query:  215 YGGMMHLMDHEKVSEYLENLMETEGLDVQLSYDGLRIPVSL 337
            + GMMHLMDH++++E L  L+E+EGLDVQLSYDGLR+PV L
Sbjct:  271 FTGMMHLMDHDEINEELAKLLESEGLDVQLSYDGLRVPVIL 311

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
YCV6_SCHPO	3.510e-23	40.88	Putative hydrolase C777.06c OS=Schizosaccharomyces...	[more]
LIPB_PORGI	2.206e-10	27.98	Octanoyltransferase OS=Porphyromonas gingivalis (s...	[more]

BLAST of g.barbadense_cottongen_reftransV1_0094655 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
D7U014_VITVI	1.207e-70	90.55	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A059BUX9_EUCGR	1.459e-70	88.19	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
B9SN26_RICCO	1.736e-70	90.55	Catalytic, putative OS=Ricinus communis GN=RCOM_03...	[more]
A0A068TNJ1_COFCA	3.708e-70	88.19	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
M0ZR92_SOLTU	6.087e-70	85.83	Uncharacterized protein OS=Solanum tuberosum GN=PG...	[more]
A0A059BUH0_EUCGR	6.716e-70	88.19	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
K4BMW6_SOLLC	2.065e-69	83.46	Uncharacterized protein OS=Solanum lycopersicum GN...	[more]
A0A067L8F4_JATCU	7.369e-69	87.40	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A022Q4C7_ERYGU	7.407e-69	87.40	Uncharacterized protein OS=Erythranthe guttata GN=...	[more]
M0SHV2_MUSAM	7.630e-69	85.04	Uncharacterized protein OS=Musa acuminata subsp. m...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	GENE3D	3.60.15.10		coord: 24..155 e-value: 2.5E-21 score: 75.6
IPR001279	Metallo-beta-lactamase	PFAM	PF12706	Lactamase_B_2	coord: 25..155 e-value: 7.1E-18 score: 64.7
IPR001279	Metallo-beta-lactamase	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 23..155
None	No IPR available	PANTHER	PTHR12553	RIBONUCLEASE Z	coord: 24..155
None	No IPR available	PANTHER	PTHR12553:SF38	SUBFAMILY NOT NAMED	coord: 24..155

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094655 ID=g.barbadense_cottongen_reftransV1_0094655; Name=g.barbadense_cottongen_reftransV1_0094655; organism=Gossypium barbadense; type=contig; length=2919bp
TTTTTTAAACAAAACCCATAGATTGATTTTAGATTGATTCTATATAAATA
GATATAAAATAAAAAATTCTATTTATTCTAAGTATACGGGGATCAGCATA
ATGCTCCCCAAGAATTATGTTATATAATGTTAGCTCATTGAATCTTTTCA
GTTGCAGATTACGGTATAACATGTTCTCACCCAAAAAACAACGGCGGACA
AACATACAAAGCTAGAGTGATACCGGTATACGCAATCCGTCATAGCTGAG
TTGTACATCAAGACCCTCGGTTTCCATCAGGTTTTCCAGGTATTCACTCA
CTTTTTCATGGTCCATCAGATGCATCATGCCTCCATAAAATCACAACAGT
AAAACATGGAAAAGTAAACAAATTACATCCTAATGATGCAATAATAAGTT
GTTGAAACTGTGGAACACTTTAGAAGGATGGAATTGAATTGTAGTGATAT
AGGCCTGAAACTAGAGACTTACCAGTAAAGAGTGTCCTCTTCGGCTTAAT
CTTCCGTACTTCCTCTAAAGCCTGAAGATAAAATAGCAAGTGAAAAAGAG
AGAGTAAGTTTTAGCATTTTAATGTTGTTTACCAGAAGATGTACAAGCAG
ATACCCTTGGAAGTCCAAAATGCGTTGATGAAGATCGATCAGGCCTCAAA
GCATCCTGAGAAAGCATTTTACATATGGACTCAATAAGGTATCCAGAAAT
TGCATTAATGAATTTGGATGTAAATTCTTGTGCATGCATGTCGATGTATA
AGGAGATATAGAGAGAGAGAGGACCAGAATGAGGATTTCACAGTTTCCCA
GAAGAGGATAAGTTTCTTCAGGTATATCACTGACATCACTGATGTAACAA
ATATCACCAAAACGAAAACCTAGTGAGCGATAACCACGGCCGTGCCACAC
TGGTAAAGGGGTAATCTGTAAATCATGAACGATGAAAGGTTCTTCTTGTA
TGATATTAAATTGCAGCTTTGAGACAGCAGCACCAGGTATAATCACACTT
GTATCTACCAAATAATAGTGAGTCTTTTTCATCACCTCAAAATCGCGCTC
GGCAACATAAATTGAGATCTTTGGCTGCACGTTGTTTGTCCAGTCACGTA
GATCATCAAGACCTCCAATTGCATCAGCATGAGAATGTGTAATTATAACC
GCATCAATTGTTCTTATCCTGACACAAATGCAACTAGTTACAACAACGAA
AATACACGACAATCGACATATATACCATAAGATAATCAGAAAAACATTCC
TCCACTGGTCTTTTTTGCTTAATGACCTTTAGGACTTGATAATAAACCTG
AGTTTTACTGAAGTTTACACTTAAGGAAGCATCAAAATGGCCTCCAGAAT
GAGTGAATGCTTGCACCATCTAGAAAAGCATATGTAAAGTACATTTTATA
TTATTATGGTTAATGCTAGTATAGGCATTGAGAAAACATTTACATTTATG
TCTATAACCAACAAATACTAAGATTATTTTGACTGAATTCCAGAACTATA
ACATGAGACCACATTTTGACAGAACACTGAAAAATCAAACTCGCACAAGA
AAACTAGTTGGTTCATCGTGCCTACCGTACATGGTGACGCATTCAATATC
ACATAACACTAAAATCAACATTTCAAATTAAAATAACTGAAGCTACAAAT
GAAACTATACAAATGTTGTATTTCATCCCTTCAAATACCATGGAAAGTCT
GATGATTTCAAGGTGTATGGGACTAAAAAGGGGAGGGTTGAAGTAAAAAT
AAAAAATAAAAAAACATCAAGTCATATGCACTAGTATTCTAAGATACATT
AAACTCAGCCACCAAAGCCCATCGATGATCATAATAATAATCTACAATCA
AATATCAACTCCATGAAGGTGAGAAGAAAAGGCTTAAGACAAGGAAAGAC
TATTCCTATGTTATATCCCAGCCATTAGAGCATGAAAACAATATGGTACA
ACACATTTAGATCATATTCCATCTCAGAGTTACAACAAAAAAAATTCCAA
AACTGCAAATGTAATAGCATCTAAGATAACACAAAGGCTAGAACTTCACC
CCCGCAATGAACATACTCTAAGAGTTAATGGATTGAACACCATGGACCAT
CTAATGACTTAAGAGCTAGACATAATAATTCGAACTTTTAAGAAAGAGAA
ACACCAAAATGCTTTTAGTATTAAACTAACCCAAATTCTGGAAACCATTG
AAGAGCACTGTGGTAGAAGAACTTGCCAGCATCAATTAGAATGTTGCATC
TTCCAGAAGGCCTACCATAATGAATAAGTAAGCTTGTATTACGTCTCCGG
TTTATGTTACCAGGCTCTGCTGCTTTGCTGCAAACCAGGCACTTCTTTAC
AGGGTCAGTCAGGCAGCTAACACGAGGAATGCCTTCGCTAGTTCCTGTCC
CTATAAAAATGATCTCGGAATGTTCTGCAGGTAAATTTTCTCTAGTATCC
ATAGTAGCAGAACTAGATTGAAGGCAAGCTTGAAGAAACCTCCTGAACGG
AAAGAACCCATTCCTTGGAAAAGAAACTGGAGAGATTCGTATTGATATTT
GGCGCTTGTAAGGTGCCAAACTCGTTAAAGAAGGTGTAGATCGAACTGTG
CCCAAAAATGGAACCATTGAGAAAGCTACCATTTTCTTATTACTATATAA
TTTCAACTTCCTTTTCCCTTTCTTGTAAATCTCGAATTTTTTTTTTTTAA
TTCAAAAGCAAATCAGCTTTTATTCCGAAATGAAAGGTGAAAATGTTGGT
TTCTTTCTATTTCTCCACACCTTTTGTTTAGCAGTTTTGGTTTGGAGAGC
ATTGGCTGCCTGAAGAAACGAAGCAAAGCATAGATAGGCCAATGTTAACC
ATATATGGTCAATCCTTTTTTTCTCTTTGCTCTTTCTTACATATATTGAA
AATATAGAGAAATTTGGAC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001279	Metallo-B-lactamas

Search form

g.barbadense_cottongen_reftransV1_0094655, g.barbadense_cottongen_reftransV1_0094655 (contig) Gossypium barbadense

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