g.barbadense_cottongen_reftransV1_0094527, g.barbadense_cottongen_reftransV1_0094527 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094527
Unique Name	g.barbadense_cottongen_reftransV1_0094527
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3385

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHSY_BETPN (Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 4.178e-81
Identity = 141/332 (42.47%), Postives = 210/332 (63.25%), Query Frame = 3

Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            + +K RY+ ++EEIL + P +     P++  R  I    V ++  EA+   IK+WG+P S +THLV+ ++S   +PG D  L K LGL P  +R+M+Y  GC  G   LR+AKD+AENN G+R+L+  SE T + F+ P+      LVG ALFGDGA A+I+G+DP  S+ERPLFEL +A Q  LPD++  IDG L E G++F L +++P II  N+E    +  A +G++  D+N +FW  HPGGPAIL+++E +L L  EKL A+R  L +YGN SS  ++++L+ M    L   +  K +  E  EWG++  FGPG+T E ++  ++ V
Sbjct:   63 SMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLFELISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGIS--DWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSL---EGGKVTTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 4.478e-81
Identity = 137/332 (41.27%), Postives = 209/332 (62.95%), Query Frame = 3

Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            + +K RY+ ++EEILK+ P L     P++  R D+    V  +  EA+   IK+WG+P S +THL++ ++S   +PG D  L K LGL P  +R M+Y  GC  G   LR+AKD+AENN G+R+L+  SE T + F+ PS      LVG ALFGDGA A+I+GSDPV  IE+P+FE+    Q   PD+E  IDG L E+G++F L +++P I+  N++    +    +G++  DYN +FW  HPGGPAIL+++E++L L PEK+ A+R  L +YGN SS  ++++L+ M ++     Q    +  E  EWG++  FGPG+T E ++  ++ +
Sbjct:   63 SMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREQGLTFHLLKDVPGIVSKNIDKALVEAFKPLGIS--DYNSIFWIAHPGGPAILDQVEQKLGLKPEKMRATREVLSEYGNMSSACVLFILDQMRKK---STQDGLNTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 4.841e-81
Identity = 135/330 (40.91%), Postives = 208/330 (63.03%), Query Frame = 3

Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNL 2063
            + + TRY+ ++E++LKQ P        ++  R DI  + V ++  EA+   IK+WGRP S +THL++ ++S   +PG D  L K LGL P  +R M+Y  GC  G   LR+AKD+AENN  +R+L+  SE T+I F+ P+      LVG ALFGDGAGA+I+GSDPV+ IE+PLFE+ +A Q  LPD++  IDG L E G++F L +++P +I  N+     +    +G++  D+N +FW  HPGGPAIL+++E  L L P+KL ++R+ L DYGN SS  ++++L+ M        +    +  E  +WG++  FGPG+T E ++  ++
Sbjct:   63 SMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGIS--DWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRN---ASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSV 387

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 4.842e-81
Identity = 138/332 (41.57%), Postives = 212/332 (63.86%), Query Frame = 3

Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            + +K RY+ ++EEILK+ P +     P++  R D+    V ++  EA+   IK+WG+P S +THL++ ++S   +PG D  L K LGL P  +R M+Y  GC  G   LR+AKD+AENN G+R+L+  SE T + F+ P+      LVG ALFGDGA A+I+GSDP L +E+PLF+L    Q  LPD+E  IDG L E G++F L +++P +I  N+E    +    +G++  DYN +FW  HPGGPAIL+++E +L L PEK+ A+R  L +YGN SS  ++++L+ M ++ +   +    +  E  +WG++  FGPG+T E ++ R++TV
Sbjct:   63 SMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLGEVGLTFHLLKDVPGLISKNIEKALVEAFQPLGIS--DYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSI---ENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 4.985e-81
Identity = 140/333 (42.04%), Postives = 210/333 (63.06%), Query Frame = 3

Query: 1071 TTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVE-SFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLT 2066
             + +K RY+ ++EEILK+ P +     P++  R D+    + ++  EA+   IK+WG+P S +THLV+ ++S   +PG D  L K LGL P  +R+M+Y  GC  G   LR+AKD+AENN G+R+L+  SE T + F+ PS      LVG ALFGDGA A+IIGSDP+  +E+PLFE+ +A Q  LPD++  IDG L E G++F L +++P +I  N+E S  E       L   D+N +FW  HPGGPAIL+++EK+L L PEKL A+R  L DYGN SS  ++++++ M +      ++   +  E  EWG++  FGPG+T E ++   ++
Sbjct:   62 NSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGSDPMPEVEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFRP---LDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKN---SAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGVS 388

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A0D2SZM8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G033300 PE=3 SV=1)

HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0
Identity = 332/334 (99.40%), Postives = 333/334 (99.70%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTA+QNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLT KDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILKKKQQKKESQEEESEWGLILAFGPGVTFEGILARNLTV
Sbjct:   63 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAIQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTYKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILKKKQQKKESQEEESEWGLILAFGPGVTFEGILARNLTV 396

HSP 2 Score: 138.658 bits (348), Expect = 2.336e-31
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLC TT 
Sbjct:    1 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCKTTT 66

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A061DYK8_THECC (Chalcone and stilbene synthase family protein OS=Theobroma cacao GN=TCM_006701 PE=3 SV=1)

HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 303/334 (90.72%), Postives = 318/334 (95.21%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMS+EILK+YPELAIEGLPTVKQRLDICN+AVTEMA+EASR CIKKWGRP+SD+THLVYVSSSEARLPGGDL+LAKGLGLSPETQRVMLYFMGCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMIIGSDPVLSIERPLFELHTA+QNFLP+TEKTIDGKLTEEGISFKLARELPQIIEDNVE FCEKLM  VGLTDKDYN MFWAVHPGGPAILNR+EKRLDLFPEKL+ASRRALMDYGNASSNTIVYVLEYMIEE L    ++K    E+SEWGLILAFGPGVTFEGILARNLTV
Sbjct:   61 KTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNNAVTEMAIEASRACIKKWGRPMSDITHLVYVSSSEARLPGGDLFLAKGLGLSPETQRVMLYFMGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPVLSIERPLFELHTAIQNFLPNTEKTIDGKLTEEGISFKLARELPQIIEDNVEGFCEKLMGIVGLTDKDYNNMFWAVHPGGPAILNRMEKRLDLFPEKLNASRRALMDYGNASSNTIVYVLEYMIEESL----KRKTESREDSEWGLILAFGPGVTFEGILARNLTV 390

HSP 2 Score: 113.235 bits (282), Expect = 4.457e-23
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 2

Query:  761 EEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            EE +EGF K  NPGKATILALGKAFPHQLVMQ+FLVDGYFKNTNCDDP+L++KLSRLC TT 
Sbjct:    3 EEAQEGFAKRANPGKATILALGKAFPHQLVMQDFLVDGYFKNTNCDDPELKQKLSRLCKTTT 64

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: B9STD8_RICCO (Chalcone synthase, putative OS=Ricinus communis GN=RCOM_0661520 PE=3 SV=1)

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 282/334 (84.43%), Postives = 308/334 (92.22%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMSEEIL++YPELA+EGLPT+KQRLDICN+AVT+MA+EAS+ CIK WGRPISD+THLVYVSSSEARLPGGDL+LA+GLGLSPETQRV LYFMGCSGG +GLR+AKDIAENNPGSR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMIIG+DPV   E PLFELHTA+QNFLPDTEK IDG+LTEEGISFKLARELP IIEDN+E FC+KLM   GLTDKDYNK+FWAVHPGGPAILNR+EKRLDLFPEKL+ASRRALMDYGNASSNTIVYVLEYMIEE L     K + +   +EWGLILAFGPG+TFEGILARNLTV
Sbjct:   59 KTTTVKTRYVVMSEEILEKYPELAVEGLPTLKQRLDICNEAVTKMAIEASQKCIKNWGRPISDITHLVYVSSSEARLPGGDLHLARGLGLSPETQRVTLYFMGCSGGVSGLRIAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGTDPVSKTESPLFELHTAIQNFLPDTEKIIDGRLTEEGISFKLARELPHIIEDNIEGFCQKLMGVAGLTDKDYNKLFWAVHPGGPAILNRMEKRLDLFPEKLNASRRALMDYGNASSNTIVYVLEYMIEESL-----KMKEENVNNEWGLILAFGPGITFEGILARNLTV 387

HSP 2 Score: 110.153 bits (274), Expect = 3.867e-22
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MGSE     G  KM NPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP+L++KL+RLC TT 
Sbjct:    1 MGSEA----GLSKMANPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTT 62

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A067DMJ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016569mg PE=3 SV=1)

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 280/334 (83.83%), Postives = 310/334 (92.81%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMS+EILK+YPELAIEGLPTVKQRLDICN AVT+MA+EAS+ CIK WGRPI+D+TH+VYVSSSEARLPGGDLYLA+GLGLSPETQRVMLYFMGCSGG +GLRVAKDIAENNPGSR+LLATSETTIIGFKPPSA+RPYDLVG ALFGDGAGAMI+GSDPV S ERPLFELHTA+QNFLP+TEKTIDG+LTEEGISFKLARELPQIIEDN+E FC KLM  +G T+ DYNKMFWAVHPGGPAILN++EKRL+L P+KL+ASRRALMDYGNASSNTIVYVLEYM+EE L    + K    E+++WGLILAFGPG+TFEGILARNLTV
Sbjct:   59 KTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESL----KMKSQDHEDTDWGLILAFGPGITFEGILARNLTV 387

HSP 2 Score: 103.219 bits (256), Expect = 5.799e-20
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 2

Query:  776 GFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTT 943
            GF    +PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP+L++KL+RLC TT
Sbjct:    6 GFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTT 61

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: V4SIG2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028633mg PE=3 SV=1)

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 280/334 (83.83%), Postives = 310/334 (92.81%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMS+EILK+YPELAIEGLPTVKQRLDICN AVT+MA+EAS+ CIK WGRPI+D+TH+VYVSSSEARLPGGDLYLA+GLGLSPETQRVMLYFMGCSGG +GLRVAKDIAENNPGSR+LLATSETTIIGFKPPSA+RPYDLVG ALFGDGAGAMI+GSDPV S ERPLFELHTA+QNFLP+TEKTIDG+LTEEGISFKLARELPQIIEDN+E FC KLM  +G T+ DYNKMFWAVHPGGPAILN++EKRL+L P+KL+ASRRALMDYGNASSNTIVYVLEYM+EE L    + K    E+++WGLILAFGPG+TFEGILARNLTV
Sbjct:   59 KTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESL----KMKSQDHEDTDWGLILAFGPGITFEGILARNLTV 387

HSP 2 Score: 103.219 bits (256), Expect = 5.799e-20
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 2

Query:  776 GFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTT 943
            GF    +PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP+L++KL+RLC TT
Sbjct:    6 GFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTT 61

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: U5G102_POPTR (Chalcone and stilbene synthase family protein OS=Populus trichocarpa GN=POPTR_0009s13140g PE=3 SV=1)

HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0
Identity = 280/334 (83.83%), Postives = 303/334 (90.72%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMS+EILK+YPELAIEGLPTVKQRLDICNDAVT MA++ASR CIKKWGRP+SD+THLVYVSSSEARLPGGDLYLA GLGLSPETQRVMLYF GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMI+G+DP+   E PLFELHTA+QNFLP+TEKTIDG+LTEEGISFKL+RELPQIIEDN+E FC KL+   GLTDKDYNKMFWAVHPGGPAILNR+EKR DL P+KL+ASRRALMDYGNASSNTIVYVLEYMIEE      +K +   E  +WGLILAFGPG+TFEGILAR L V
Sbjct:   63 KTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNDAVTRMAIDASRACIKKWGRPVSDITHLVYVSSSEARLPGGDLYLAGGLGLSPETQRVMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIVGTDPIPVTESPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLSRELPQIIEDNIEGFCHKLIGNAGLTDKDYNKMFWAVHPGGPAILNRMEKRFDLLPDKLNASRRALMDYGNASSNTIVYVLEYMIEEC-----RKMKEGSENCDWGLILAFGPGITFEGILARKLAV 391

HSP 2 Score: 103.219 bits (256), Expect = 5.484e-20
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MG E+  + G     NPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD +L++KL+RLC TT 
Sbjct:    1 MGYEQIVQGGLTTKANPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDLELKQKLTRLCKTTT 66

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: B9H143_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17460g PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 277/334 (82.93%), Postives = 303/334 (90.72%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMS+EIL +YPELAIEG+PT+KQRLDICNDAVT+MA+ ASR CIKKWGR +SD+TH+VYVSSSEARLPGGDLYLA GLGLSPETQRVMLYF GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPS DRPYDLVG ALFGDGAGAM+IG+DPV   E PLFELHTA+QNFLP+TEKTIDG+LTEEGISFKLARELPQIIEDN+E FC KL+   GLTDKDYNKMFWAVHPGGPAILNR+EKRLDL P+KL+ASRRALMDYGNASSNTIVYVLEYMIEE      +K ++     +WGLILAFGPG+TFEGILARNLT+
Sbjct:   63 KTTTVKTRYVVMSDEILNKYPELAIEGIPTIKQRLDICNDAVTQMAIGASRACIKKWGRSVSDITHMVYVSSSEARLPGGDLYLAGGLGLSPETQRVMLYFSGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMVIGTDPVPVTESPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCHKLIGVAGLTDKDYNKMFWAVHPGGPAILNRMEKRLDLLPDKLNASRRALMDYGNASSNTIVYVLEYMIEE-----SRKMKAGAANCDWGLILAFGPGITFEGILARNLTI 391

HSP 2 Score: 108.227 bits (269), Expect = 1.477e-21
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MGSE+  + G     +PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP+L++KL+RLC TT 
Sbjct:    1 MGSEQIGQGGLTSKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTT 66

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A067K700_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19599 PE=3 SV=1)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 277/334 (82.93%), Postives = 304/334 (91.02%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            +TTTVKTRYVVMSEEIL +YPELAIEG+PTVKQRLDICNDAVT+MA+EAS  CIKKWGRPISD+THLVYVSSSEARLPGGDL+LA+GLGLSPETQRVMLYFMGCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGF+PP+ADRPYDLVG ALFGDGAGAMIIG+DPV ++E PLFELHTA+QNFLPDTEK IDG++TEEGISFKLARELP IIEDN+ESFC+KLM   G+ DK YN  FWAVHPGGPAILNRIEKRL L PEKL+ASRRALMDYGNASSNTIVYVLEYMIEE L     K   + E+ +WGLILAFGPG+T EG+LARNL+V
Sbjct:   63 QTTTVKTRYVVMSEEILNKYPELAIEGIPTVKQRLDICNDAVTQMAIEASETCIKKWGRPISDITHLVYVSSSEARLPGGDLHLARGLGLSPETQRVMLYFMGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFRPPNADRPYDLVGVALFGDGAGAMIIGTDPVSNVESPLFELHTAIQNFLPDTEKIIDGRMTEEGISFKLARELPHIIEDNIESFCQKLMRGAGVGDKGYNNFFWAVHPGGPAILNRIEKRLQLLPEKLNASRRALMDYGNASSNTIVYVLEYMIEESL-----KINKENEDCQWGLILAFGPGITLEGVLARNLSV 391

HSP 2 Score: 107.457 bits (267), Expect = 2.684e-21
Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MGSEE  + G  K   PG ATILALGKAFPHQLVMQEFLVDGYFKNTNC DPDL++KL+RLC TT 
Sbjct:    1 MGSEEIVQTGLSKKAKPGTATILALGKAFPHQLVMQEFLVDGYFKNTNCYDPDLKQKLTRLCQTTT 66

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: F6I151_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01460 PE=3 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 277/334 (82.93%), Postives = 305/334 (91.32%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMSEEIL++YPEL IEG PTVKQRLDICN AVT+MA++AS+ CIKKWGR +S++THLVYVSSSEARLPGGDLYLAKGLGLSPET RV LYFMGCSGG AGLRVAKDIAENNP SR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMIIGSDP+ S ERPLFELHTA+QNFLPDTEKTIDG+LTEEGISFKLARELPQIIED++E+FC+KL+  VG +D+DYNK+FWAVHPGGPAILNR+EKRLDL PEKL+ASRRAL DYGNASSNTIVYVLEYM+EE      + K   + + EWGLILAFGPG+TFEGILARNLTV
Sbjct:   63 KTTTVKTRYVVMSEEILRKYPELVIEGQPTVKQRLDICNKAVTQMAIDASKACIKKWGRSVSEITHLVYVSSSEARLPGGDLYLAKGLGLSPETHRVQLYFMGCSGGVAGLRVAKDIAENNPESRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPIPSTERPLFELHTAIQNFLPDTEKTIDGRLTEEGISFKLARELPQIIEDHIEAFCDKLIRNVGFSDEDYNKIFWAVHPGGPAILNRMEKRLDLLPEKLNASRRALADYGNASSNTIVYVLEYMLEE----SSKTKRQDQGDGEWGLILAFGPGITFEGILARNLTV 392

HSP 2 Score: 107.457 bits (267), Expect = 3.189e-21
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 2

Query:  749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            MGS    + G  K  NPGKATILALGKAFPHQLVMQEFLVDGYF+NTNCDDPDL++KL+RLC TT 
Sbjct:    1 MGSGTVEQVGSLKKANPGKATILALGKAFPHQLVMQEFLVDGYFRNTNCDDPDLKEKLARLCKTTT 66

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: M0ZMY1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001635 PE=3 SV=1)

HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0
Identity = 273/334 (81.74%), Postives = 305/334 (91.32%), Query Frame = 3

Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069
            KTTTVKTRYVVMSEEILK+YPELA+EGLPTVKQRLDICN AVTEMA+EAS+ CIKKWGRPISD+TH+VYVSSSEARLPGGDLYLAKGLGLSPET+RVMLYF GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPS DRPYDLVG ALFGDGAGAMIIGS+P+  IERPLFELHTA+Q+FLPDTEK IDG+LTEEGISFKL RELPQIIEDN+E FC+KL++  G+ D++YNK+FWAVHPGGPAILNR+EK+LDL PEKLSASRRAL DYGNASSNTIVYVLEYM+EE           +++ ++WGLILAFGPG+TFEGIL +NLT+
Sbjct:   58 KTTTVKTRYVVMSEEILKKYPELAVEGLPTVKQRLDICNAAVTEMAIEASQSCIKKWGRPISDITHVVYVSSSEARLPGGDLYLAKGLGLSPETKRVMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSNPIRDIERPLFELHTAIQHFLPDTEKIIDGRLTEEGISFKLERELPQIIEDNIEGFCDKLISISGINDREYNKLFWAVHPGGPAILNRLEKKLDLSPEKLSASRRALADYGNASSNTIVYVLEYMLEE-----------KKDITDWGLILAFGPGITFEGILTKNLTI 380

HSP 2 Score: 95.9005 bits (237), Expect = 1.331e-17
Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 2

Query:  791 VNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946
            +N G ATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP+L+++L+RLC TT 
Sbjct:   10 INFGNATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQRLTRLCKTTT 61

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
CHSY_BETPN	4.178e-81	42.47	Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV...	[more]
CHS1_PEA	4.478e-81	41.27	Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ...	[more]
CHS9_DAUCA	4.841e-81	40.91	Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ...	[more]
CHS3_SOYBN	4.842e-81	41.57	Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV...	[more]
CHSY_HYDMC	4.985e-81	42.04	Chalcone synthase OS=Hydrangea macrophylla GN=CHS ...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2SZM8_GOSRA	2.336e-31	99.40	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061DYK8_THECC	4.457e-23	90.72	Chalcone and stilbene synthase family protein OS=T...	[more]
B9STD8_RICCO	3.867e-22	84.43	Chalcone synthase, putative OS=Ricinus communis GN...	[more]
A0A067DMJ5_CITSI	5.799e-20	83.83	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4SIG2_9ROSI	5.799e-20	83.83	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
U5G102_POPTR	5.484e-20	83.83	Chalcone and stilbene synthase family protein OS=P...	[more]
B9H143_POPTR	1.477e-21	82.93	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
A0A067K700_JATCU	2.684e-21	82.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
F6I151_VITVI	3.189e-21	82.93	Putative uncharacterized protein OS=Vitis vinifera...	[more]
M0ZMY1_SOLTU	1.331e-17	81.74	Uncharacterized protein OS=Solanum tuberosum GN=PG...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 291..311
None	No IPR available	PANTHER	PTHR11877	HYDROXYMETHYLGLUTARYL-COA SYNTHASE	coord: 4..337
None	No IPR available	PANTHER	PTHR11877:SF25	SUBFAMILY NOT NAMED	coord: 4..337
IPR011141	Polyketide synthase, type III	PIRSF	PIRSF000451	PKS_III	coord: 2..337 e-value: 1.0E-107 score: 357.9
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 4..177 e-value: 2.2E-61 score: 206.7
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 179..333 e-value: 3.0E-48 score: 162.6
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 5..172
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 178..333
IPR012328	Chalcone/stilbene synthase, C-terminal	PFAM	PF02797	Chal_sti_synt_C	coord: 181..335 e-value: 1.7E-61 score: 206.5
IPR001099	Chalcone/stilbene synthase, N-terminal	PFAM	PF00195	Chal_sti_synt_N	coord: 4..171 e-value: 1.2E-79 score: 266.7

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094527 ID=g.barbadense_cottongen_reftransV1_0094527; Name=g.barbadense_cottongen_reftransV1_0094527; organism=Gossypium barbadense; type=contig; length=3385bp
GAAGATTTCAGCTTAAAGTTATTCATTTGTATGCTTAGCTTTTGTGTTTT
TAGTTTTGAATCCAACACGAATCCTTAATTAAAAAGAAAAAATATGAAAC
TTGAACTCAAGTCAAGGCTGACGGAGAATATGTTTGATATAAGGTAACGG
TACCCGGGGGGTGACGATCAAATCTACATGCAGTGATGTGGGGAAGACGA
ACTAAATCCTGTCATCACTGCATTTTGTTATTTTATTGTTCTTTTCCTCA
TAGGCATTCTTTGACAGATCAACCAACACTGTAAAAGCACTGGAGTAGAT
TGTAGAATATCTTGGCAAATGATTCAAGCCCGGCAGGTTTGTTTTTCTTT
ATCGGCAAAACTCCACCAAATAAATTAAGGACTTTGGGTACATATTTACA
TAGCAATTGACATATCCTACCATGCTATCAATACAGTAAAATGCAAATTT
AAACCTCGAATCAAACCCCAACCAACGCTTGTTAAAATGAACTGCATGAA
GTTCTTACTTCTCAACGACTCTTTCTCAATATAATAATAATGACACCTTT
CTCATTTTTCTTAATAGGAATGAGTAATCCACAACTCCCTTTAAGCTTGC
TCTAAAAAATTGTGCTTGCAGAAGCACCGAAAATATATATATAAATATAT
ATAGAGAGTAGCATACCATCAATACTCCTTTGCAGGTAAAACAGTTCCTA
TACAACCTCCCGAGGGAGTAAATTCAGTAACGTTTCAGGGAAGAAAATAT
GGGGAGTGAAGAGGAACCAAAAGAAGGTTTCCCGAAGATGGTGAACCCTG
GGAAAGCCACAATTCTGGCTCTGGGAAAGGCTTTCCCTCACCAGCTTGTC
ATGCAAGAATTTCTGGTTGATGGGTATTTTAAGAACACCAACTGCGATGA
CCCAGATCTCAGGAAAAAGCTAAGCCGACTCTGTAACACTACCAACTTCC
ACCTCTGATTTATTTTGCTTGCTATATTGCTAGTCTCCCCTCTCCCTTCT
TCCTTTTTTCAGTCTCAACTTCAACAGTTATTTAACATATTTCCCTTCAT
TTTGGCTCTTGGCAGGCAAGACAACTACTGTTAAAACAAGGTATGTGGTC
ATGTCAGAAGAAATCCTGAAGCAGTATCCAGAGCTTGCCATTGAGGGACT
CCCCACTGTGAAGCAACGATTGGATATCTGTAACGATGCTGTCACGGAGA
TGGCTGTTGAAGCCTCACGAGTTTGTATCAAAAAATGGGGACGGCCTATA
TCAGACTTAACCCACTTAGTCTATGTTTCCTCGAGTGAAGCTCGGCTGCC
TGGTGGTGACCTTTACTTGGCCAAAGGACTTGGACTCAGCCCTGAGACGC
AACGTGTGATGCTCTATTTCATGGGCTGCTCTGGGGGTGCAGCTGGCCTT
CGTGTAGCAAAAGACATTGCCGAAAACAATCCCGGAAGTCGGATCTTACT
AGCTACTTCTGAAACTACCATTATTGGTTTCAAACCTCCAAGTGCAGATA
GACCATATGATCTGGTTGGTGCAGCTCTTTTTGGCGATGGTGCTGGAGCT
ATGATCATTGGCTCTGATCCAGTTTTGAGCATTGAGAGACCTCTCTTTGA
GCTTCACACTGCAATGCAGAATTTCTTGCCTGATACTGAGAAGACGATTG
ATGGGAAACTTACAGAAGAGGGGATTAGTTTCAAGCTTGCAAGGGAGCTT
CCTCAGATAATTGAAGATAACGTTGAAAGTTTCTGTGAGAAGTTGATGGC
AACCGTTGGATTGACTGACAAGGACTACAACAAGATGTTCTGGGCTGTTC
ATCCTGGTGGACCTGCAATCTTGAACAGAATAGAAAAACGACTAGATTTG
TTTCCAGAGAAACTAAGTGCCAGTAGAAGAGCGTTGATGGATTATGGAAA
TGCTAGCAGTAACACAATTGTGTATGTGTTGGAATACATGATAGAAGAGA
TCTTGAAGAAGAAGCAGCAGAAGAAAGAGAGCCAAGAAGAAGAGAGTGAA
TGGGGATTGATTTTAGCTTTTGGACCTGGGGTTACCTTCGAGGGTATTCT
TGCAAGAAACCTAACAGTATAAGAATAATGTCTTACAATTTCAAAGAAGT
TGGATCTCCTATTATATAATCATAGTGAAAATCAATTATCATGCATGCAA
AAGGAGACCTTATGCATTTCATGTTTCATAAAGAATCTACGAAACTGAAT
ACTCTAAATCTATACGATTATTATTTCTAGTATTCTGTCATTTGATTCTC
TAAAAACTTAAGCCAAACTGATCTTTTTACATGCAATCTTGTAAACAGGT
GGGAAAGTGAATTCTCAATGTCTCCAAAATATGAAGGTTGATAATCATCT
AAAGCCAGTTTCAGTCAAAGTATATTTTGGAACTGTAAGCTAGAACTTCT
ATTCATTTCCATCCAGACCTGTTAGATTATTACTTCAAATTAAAAATTGT
ACGCTAGCTGAGAGCCAATGCATATCATCACATCTAGGAACAGTCTACAA
TAATTAACTTCATATAAGCAAAAGATTAGCATTTGACATAAAAAATTAAT
CCATCTACGAAATGTTTTCAATATATATCCACCCAAAGTTTCTGCACCCC
GAAATTTACAAACAATCCGCTAATTTCCAGTCATAAGAAACATGTCGAGA
GCAAAAACCAGAACTTGAACTAGGATGCCTAGTCACATTTTTAACCGAGT
AATACTTTTTTCGGCAAACAAGCTCATCGATCAAAGCAAAACAGAATCTT
CACTTATACTACTCCGGAGGGAAGACGGAGAACAAGCTGCCCTCCAAAGA
CACTCTTAATATAATAGTAACAGAAGTCTGCTAAAATAAAAGTTTGAACA
ATTTCTGATATAAGAACCATAGAAGGCCACAATCCATAACCCAGGGCTAC
CAGCAAGCGTCCTCGGCTGTCTAAAACCTGTTGAAAGCAGTAGAGAATGA
ATTAACATCTTAGAACAATCACACTCATAATGACTCAAAAAAATGCTTCT
CGAACCAGCATCATACAGAAGGTTTCCCTTCCACACAAAAACACTTATGT
TGACACAGGAGGCTAATTAAAATGGCATCAACTAACATCTAGAACCAACA
ACCACACTCACACAATAAGCATTCAATTCAACCTTCAGGATCATTAATCA
TGCAGGCTGAAGCTATCTTTCTTTTTCCTAAGTAGATAAATTTTACAATA
AACAGACTAGTATCCACTTAATGCACAGACTGGGTCTCACTTTCAAAATA
GCTAGTGTTAATACATGACTAACGGAAAACCAATCATGTTCAACTTAACG
TCACAAGATCAAACCTGGAGAACCCAGTGAGCACAGCTGAGGAACCTTGC
AACACCCAACGCAAACACATAATGAGCTGTAAAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011141	Polyketide_synthase_type-III
IPR016039	Thiolase-like
IPR012328	Chalcone/stilbene_synt_C
IPR001099	Chalcone/stilbene_synt_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0008152	metabolic process

Search form

g.barbadense_cottongen_reftransV1_0094527, g.barbadense_cottongen_reftransV1_0094527 (contig) Gossypium barbadense

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