g.barbadense_cottongen_reftransV1_0094527, g.barbadense_cottongen_reftransV1_0094527 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHSY_BETPN (Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 4.178e-81 Identity = 141/332 (42.47%), Postives = 210/332 (63.25%), Query Frame = 3 Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 + +K RY+ ++EEIL + P + P++ R I V ++ EA+ IK+WG+P S +THLV+ ++S +PG D L K LGL P +R+M+Y GC G LR+AKD+AENN G+R+L+ SE T + F+ P+ LVG ALFGDGA A+I+G+DP S+ERPLFEL +A Q LPD++ IDG L E G++F L +++P II N+E + A +G++ D+N +FW HPGGPAIL+++E +L L EKL A+R L +YGN SS ++++L+ M L + K + E EWG++ FGPG+T E ++ ++ V Sbjct: 63 SMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLFELISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGIS--DWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSL---EGGKVTTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 4.478e-81 Identity = 137/332 (41.27%), Postives = 209/332 (62.95%), Query Frame = 3 Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 + +K RY+ ++EEILK+ P L P++ R D+ V + EA+ IK+WG+P S +THL++ ++S +PG D L K LGL P +R M+Y GC G LR+AKD+AENN G+R+L+ SE T + F+ PS LVG ALFGDGA A+I+GSDPV IE+P+FE+ Q PD+E IDG L E+G++F L +++P I+ N++ + +G++ DYN +FW HPGGPAIL+++E++L L PEK+ A+R L +YGN SS ++++L+ M ++ Q + E EWG++ FGPG+T E ++ ++ + Sbjct: 63 SMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREQGLTFHLLKDVPGIVSKNIDKALVEAFKPLGIS--DYNSIFWIAHPGGPAILDQVEQKLGLKPEKMRATREVLSEYGNMSSACVLFILDQMRKK---STQDGLNTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 4.841e-81 Identity = 135/330 (40.91%), Postives = 208/330 (63.03%), Query Frame = 3 Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNL 2063 + + TRY+ ++E++LKQ P ++ R DI + V ++ EA+ IK+WGRP S +THL++ ++S +PG D L K LGL P +R M+Y GC G LR+AKD+AENN +R+L+ SE T+I F+ P+ LVG ALFGDGAGA+I+GSDPV+ IE+PLFE+ +A Q LPD++ IDG L E G++F L +++P +I N+ + +G++ D+N +FW HPGGPAIL+++E L L P+KL ++R+ L DYGN SS ++++L+ M + + E +WG++ FGPG+T E ++ ++ Sbjct: 63 SMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGIS--DWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRN---ASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSV 387
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 4.842e-81 Identity = 138/332 (41.57%), Postives = 212/332 (63.86%), Query Frame = 3 Query: 1074 TTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 + +K RY+ ++EEILK+ P + P++ R D+ V ++ EA+ IK+WG+P S +THL++ ++S +PG D L K LGL P +R M+Y GC G LR+AKD+AENN G+R+L+ SE T + F+ P+ LVG ALFGDGA A+I+GSDP L +E+PLF+L Q LPD+E IDG L E G++F L +++P +I N+E + +G++ DYN +FW HPGGPAIL+++E +L L PEK+ A+R L +YGN SS ++++L+ M ++ + + + E +WG++ FGPG+T E ++ R++TV Sbjct: 63 SMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLGEVGLTFHLLKDVPGLISKNIEKALVEAFQPLGIS--DYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSI---ENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 4.985e-81 Identity = 140/333 (42.04%), Postives = 210/333 (63.06%), Query Frame = 3 Query: 1071 TTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVE-SFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLT 2066 + +K RY+ ++EEILK+ P + P++ R D+ + ++ EA+ IK+WG+P S +THLV+ ++S +PG D L K LGL P +R+M+Y GC G LR+AKD+AENN G+R+L+ SE T + F+ PS LVG ALFGDGA A+IIGSDP+ +E+PLFE+ +A Q LPD++ IDG L E G++F L +++P +I N+E S E L D+N +FW HPGGPAIL+++EK+L L PEKL A+R L DYGN SS ++++++ M + ++ + E EWG++ FGPG+T E ++ ++ Sbjct: 62 NSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGSDPMPEVEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFRP---LDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKN---SAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGVS 388
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: V7AI43_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G039700g PE=3 SV=1) HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0 Identity = 277/332 (83.43%), Postives = 300/332 (90.36%), Query Frame = 3 Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNL 2063 KTTTVKTRYVVMSEEIL +YPEL EG PTVKQRL+ICN+AVTEMA+EA+ CIK WG +SD+THLVYVSSSEARLPGGDLYLAKGLGLSP+TQR+MLYF GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMIIGSDP+L E+PLFELHTA+Q FLP TEK IDG+LTEEGISFKLARELPQIIEDNVE FCEKLM+ VG +K+YNK+FWAVHPGGPAILNRIEKRLDL PEKLSASRRALMDYGNASSNTIVYVLEYMIEE L + ++ +SEWGLILAFGPG+TFEGILARNL Sbjct: 63 KTTTVKTRYVVMSEEILIKYPELVTEGTPTVKQRLEICNEAVTEMAIEAALGCIKNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILEYEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCEKLMSVVGFQNKEYNKVFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEAL----KTRKDGRGDSEWGLILAFGPGITFEGILARNL 390 HSP 2 Score: 96.6709 bits (239), Expect = 7.998e-18 Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946 MG E K K VNPGKATILALGKAFP QLVMQE+LVDGYF++TNCD+P+L++KL+RLC TT Sbjct: 1 MGEEGIWKGVTKKGVNPGKATILALGKAFPPQLVMQEYLVDGYFRSTNCDNPELKQKLTRLCKTTT 66
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A078HAS3_BRANA (BnaA09g41780D protein OS=Brassica napus GN=BnaA09g41780D PE=3 SV=1) HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0 Identity = 279/334 (83.53%), Postives = 304/334 (91.02%), Query Frame = 3 Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 KTTTVKTRYVVMSEEIL +YPELAIEG TVKQRLDICNDAVTEMAVEASR CIKKWGR ISD+THLVYVSSSEARLPGGDLYLAKGLGLSPET V+LYF+GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPSADRPYDLVG ALFGDGAGAMIIGSDP E+PLFELHTA+QNFLPDTEKTIDG+LTEEGI+F L+RELP++IEDNVESFC+KL+ GLT KDYN+MFWAVHPGGPAILNR+EKRL+L PEKLS SRRALMDYGNASSN+IVYVLEYM+EE ++ + +E E+EWGLILAFGPGVTFEGI+ARNL V Sbjct: 63 KTTTVKTRYVVMSEEILTKYPELAIEGGSTVKQRLDICNDAVTEMAVEASRACIKKWGRSISDITHLVYVSSSEARLPGGDLYLAKGLGLSPETHPVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPDPISEKPLFELHTAIQNFLPDTEKTIDGRLTEEGINFTLSRELPKLIEDNVESFCKKLIGKAGLTPKDYNQMFWAVHPGGPAILNRMEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEE----SRKARNMKEVENEWGLILAFGPGVTFEGIVARNLDV 392 HSP 2 Score: 102.449 bits (254), Expect = 1.079e-19 Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 2 Query: 749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946 MGS + + G K NPGKATILA+GKAFPHQLVMQE+LVDGYFK TNCDDP+L++KL+RLC TT Sbjct: 1 MGSIDATELGSEKKPNPGKATILAIGKAFPHQLVMQEYLVDGYFKTTNCDDPELKQKLTRLCKTTT 66
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: Q460X2_ARAHG (Chalcone synthase family protein OS=Arabidopsis halleri subsp. gemmifera GN=CHS4 PE=2 SV=1) HSP 1 Score: 561.607 bits (1446), Expect = 0.000e+0 Identity = 277/334 (82.93%), Postives = 303/334 (90.72%), Query Frame = 3 Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 KTTTVKTRYVVMSEEILK+YPELAIEG TV QRLDICNDAVTEMAVEASR CIK WGR IS++THLVYVSSSEARLPGGDLYLAKGLGLSP+T RV+LYF+GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPS DRPYDLVG ALFGDGAGAMIIGSDP E+PLFELHTA+QNFLPDTEKTIDG+LTE+GI+FKLARELPQIIEDNVE+FC+KL+ GL K+YN+MFWAVHPGGPAILNR+EKRL+L PEKLS SRRALMDYGNASSN+IVYVLEYM+EE ++ + EEE+EWGLILAFGPGVTFEGI+ARNL V Sbjct: 63 KTTTVKTRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISEITHLVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPVCEKPLFELHTAIQNFLPDTEKTIDGRLTEQGINFKLARELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGGPAILNRMEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEE----SKKVRNMNEEENEWGLILAFGPGVTFEGIIARNLDV 392 HSP 2 Score: 100.523 bits (249), Expect = 4.649e-19 Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946 MGS + G K NPGKATILALGKAFPHQLVMQE+LVDGYFK T CDDP+L++KL+RLC TT Sbjct: 1 MGSIDAEVLGSEKKSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDDPELKQKLTRLCKTTT 66
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A0D3DHR3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=LAP5 PE=3 SV=1) HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0 Identity = 274/334 (82.04%), Postives = 300/334 (89.82%), Query Frame = 3 Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 KTTTVKTRYVVMSEEIL +YPE+AIEG TVKQRLDICNDAVTEMAVEASR CIK WGR +SD+THLVYVSSSEARLPGGDL+LAKGLGLSPET RV+LYF+GCSGG AGLRVAKDIAENNPGSR+LLATSETTIIGFKPPS DRPYDLVG ALFGDGAGAMIIGSDP E+PLFELHTA+QNFLPDTEKTIDG+LTE GI+F L+RELPQIIEDNVESFC+KL+ GL DKDYN+MFWAVHPGGPAILNR+EKRL+L PEKLS SRR+LMDYGNASSN+IVYVLEYM+EE ++ + E+EWGLILAFGPGVTFEGI+ARNL V Sbjct: 63 KTTTVKTRYVVMSEEILTKYPEIAIEGGSTVKQRLDICNDAVTEMAVEASRSCIKNWGRSVSDITHLVYVSSSEARLPGGDLFLAKGLGLSPETHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSKDRPYDLVGVALFGDGAGAMIIGSDPDPVSEKPLFELHTAIQNFLPDTEKTIDGRLTETGINFTLSRELPQIIEDNVESFCKKLIGKAGLADKDYNQMFWAVHPGGPAILNRMEKRLNLSPEKLSPSRRSLMDYGNASSNSIVYVLEYMLEE----SRKSRSMSGSENEWGLILAFGPGVTFEGIVARNLDV 392 HSP 2 Score: 100.523 bits (249), Expect = 4.143e-19 Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 749 MGSEEEPKEGFPKMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946 MGS + + K NPGKATILA+GKAFPHQLVMQE+LVDGYFK TNCDDP+L++KL+RLC TT Sbjct: 1 MGSIDATELASEKKPNPGKATILAIGKAFPHQLVMQEYLVDGYFKTTNCDDPELKQKLTRLCKTTT 66
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Match: A0A059AP86_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01371 PE=3 SV=1) HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0 Identity = 272/334 (81.44%), Postives = 310/334 (92.81%), Query Frame = 3 Query: 1068 KTTTVKTRYVVMSEEILKQYPELAIEGLPTVKQRLDICNDAVTEMAVEASRVCIKKWGRPISDLTHLVYVSSSEARLPGGDLYLAKGLGLSPETQRVMLYFMGCSGGAAGLRVAKDIAENNPGSRILLATSETTIIGFKPPSADRPYDLVGAALFGDGAGAMIIGSDPVLSIERPLFELHTAMQNFLPDTEKTIDGKLTEEGISFKLARELPQIIEDNVESFCEKLMATVGLTDKDYNKMFWAVHPGGPAILNRIEKRLDLFPEKLSASRRALMDYGNASSNTIVYVLEYMIEEILXXXXXXXXXXXXXXXWGLILAFGPGVTFEGILARNLTV 2069 KTTTVKTRYVVMSEEIL++YPELA+EGLPTVKQRLDICN+AVTEMA++AS+ CIKKWGRP SD+THLVYVSSSEARLPGGDLYLAKG+ LSPET+RV+LYF+GCSGG AGLRVAKDIAENNPGSRILLATSETTIIG+KPPSA+RPYDLVG ALFGDGAGAMIIG+DP LSIE+PLFEL+TA+Q+FLPDTEK IDG+LTEEGISFKLARELPQIIEDN+E FC KLM +GL++KDYN++FWAVHPGGPAILNR+EKRLDL P+KL ASR+AL DYGNASSNTIVYVL+YM+EE + + K+ + + E+GLILAFGPGVTFEGILARNLT+ Sbjct: 64 KTTTVKTRYVVMSEEILEKYPELAMEGLPTVKQRLDICNEAVTEMAIKASQDCIKKWGRPASDITHLVYVSSSEARLPGGDLYLAKGIKLSPETRRVLLYFVGCSGGVAGLRVAKDIAENNPGSRILLATSETTIIGYKPPSAERPYDLVGVALFGDGAGAMIIGADPDLSIEKPLFELNTAIQHFLPDTEKIIDGRLTEEGISFKLARELPQIIEDNIEGFCSKLMEPIGLSNKDYNRIFWAVHPGGPAILNRLEKRLDLLPDKLRASRQALKDYGNASSNTIVYVLDYMLEESM----KMKKDDQSQDEFGLILAFGPGVTFEGILARNLTI 393 HSP 2 Score: 95.5153 bits (236), Expect = 2.018e-17 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 785 KMVNPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPDLRKKLSRLCNTTN 946 K GKATILALGKAFP+QLVMQEFLVDGYF+NTNCDDPDL++KL+RLC TT Sbjct: 14 KKAGRGKATILALGKAFPNQLVMQEFLVDGYFRNTNCDDPDLKQKLTRLCKTTT 67 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094527 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094527 ID=g.barbadense_cottongen_reftransV1_0094527; Name=g.barbadense_cottongen_reftransV1_0094527; organism=Gossypium barbadense; type=contig; length=3385bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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