g.barbadense_cottongen_reftransV1_0094274, g.barbadense_cottongen_reftransV1_0094274 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG25_HUMAN (Rho GTPase-activating protein 25 OS=Homo sapiens GN=ARHGAP25 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.559e-10 Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 1339 DIERWQK---GVAST--DVFGVPIEVTVQRQQAIKP--IPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYD---------EIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 ++E W K VA T VFG ++ TV +Q P +P+++ +CA++++ G N + +F+ G +++QL A++ S + VA+L K Y+ LPEP+ + Y+ A++ M+ L +LP NY L +I L + +NK+ V Sbjct: 138 EMEEWVKFLRRVAGTPCGVFGQRLDETVAYEQKFGPHLVPILVEKCAEFILEHGRNEEGIFRLPGQDNLVKQLRDAFDAGERPSFDRDTDVHTVASLLKLYLRDLPEPVVPWSQYEGFLLCGQLTNADEAKAQQELMKQ-LSILPRDNYSLLSYICRFLHEIQLNCAVNKMSV 309
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG01_HUMAN (Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.891e-10 Identity = 43/149 (28.86%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDV-AALAKYYIASLPEPLTTFELYDEI-------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ ++ +PIP++L YL + ++ +F+ + +V+ ++ YN + N + + A + K ++ LPEPL TF+LY + +S R + A VL+ LP NY L F+TA L+++S S NK+ Sbjct: 242 FGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDF-DQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQR--VPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKM 387
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_HUMAN (Rho GTPase-activating protein 24 OS=Homo sapiens GN=ARHGAP24 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.248e-10 Identity = 45/178 (25.28%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ V Sbjct: 108 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSV 285
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG01_MOUSE (Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.163e-10 Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDV-AALAKYYIASLPEPLTTFELYDEI-------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ ++ PIP++L YL + ++ +F+ + +V+ ++ YN + N + + A + K ++ LPEPL TF+LY + +S R + + VL+ LP NY L F+TA L+++S NK+ Sbjct: 242 FGVSLQHLQEKSPGQDPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDF-DQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQR--VEVTQQVLQTLPEENYQVLHFLTAFLVQISAHCDQNKM 387
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_RAT (Rho GTPase-activating protein 24 OS=Rattus norvegicus GN=Arhgap24 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.307e-10 Identity = 44/176 (25.00%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ Sbjct: 107 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELTKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKM 282
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_MOUSE (Rho GTPase-activating protein 24 OS=Mus musculus GN=Arhgap24 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.075e-9 Identity = 44/176 (25.00%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ Sbjct: 106 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELMKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKM 281
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RBP1_MOUSE (RalA-binding protein 1 OS=Mus musculus GN=Ralbp1 PE=1 SV=4) HSP 1 Score: 63.5438 bits (153), Expect = 7.190e-9 Identity = 42/152 (27.63%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 1378 VFGVPIEVTVQRQQAIKPI--PLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNV------LKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 +FGVP+ V+R + P + C DY+ G+ + +++ G K +++L +AY+++ + ++ E P VA+L K Y+ LPE L T EL + A M V L+ LP N++ L ++ L V K + K+ + Sbjct: 189 IFGVPLVDAVERTMMYDGVRLPAVFRECVDYMEKHGMKCEGVYRVSGIKSKVDELKAAYDREESPNL-EEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGKTTEMEKVQEFQRLLRELPECNHLLLSWLIVHLDHVIAKELETKMNI 339
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RBP1_HUMAN (RalA-binding protein 1 OS=Homo sapiens GN=RALBP1 PE=1 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 8.521e-9 Identity = 40/152 (26.32%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 1378 VFGVPIEVTVQRQQAIKPI--PLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSA------RSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 +FG+P+ V+R I P + C DY+ G+ + +++ G K +++L +AY+++ + ++ E P VA+L K Y+ LPE L T EL + A + + +LK LP NY+ + ++ + V K + K+ + Sbjct: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNL-EDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNI 339
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG08_HUMAN (Rho GTPase-activating protein 8 OS=Homo sapiens GN=ARHGAP8 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.646e-8 Identity = 40/146 (27.40%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI---KSARSSIH--AMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ + Q + IP +L YL G+ ++ LF+ + + ++ YNQ + + + A + K ++ LP+PL TF+ Y++I SS+ R +L+ LP NY+ L ++ L VS++S+ NK+ Sbjct: 224 FGVSLQYLKDKNQG-ELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTVREIQRLYNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITCVESSLRVTGCRQILRSLPEHNYVVLRYLMGFLHAVSRESIFNKM 368
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG44_HUMAN (Rho GTPase-activating protein 44 OS=Homo sapiens GN=ARHGAP44 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.195e-8 Identity = 44/174 (25.29%), Postives = 82/174 (47.13%), Query Frame = 1 Query: 1324 KTILTDIERWQKGVASTDVFGVPIE--VTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYN------QDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDE------IKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + +L I+ Q+ FG P+E +T+ ++ PI C L+ G+ + LF+ +++L +A + Q+++A +P +A K Y+ LPEPL TFELYDE ++ + A+ N + LP N+ + ++ L ++S+ +NK+ Sbjct: 234 QAVLPQIKAQQEAWVEKPSFGKPLEEHLTISGREIAFPI----EACVTMLLECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQEYSA------DPHAIAGALKSYLRELPEPLMTFELYDEWIQASNVQEQDKKLQALWNACEKLPKANHNNIRYLIKFLSKLSEYQDVNKM 397
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: U5GL40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24160g PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 1.843e-86 Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQ+ K +P ILV+CADYLILSG+NS LFKAEGDKKVI+QLVS YNQD NAS+PEG+NPIDVA LAK Y+ASLPEPLTTFELYDEIK ARSSIH M+N+LK LP+VNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQEFSKLVPHILVKCADYLILSGLNSVDLFKAEGDKKVIQQLVSLYNQDSNASLPEGLNPIDVAFLAKCYLASLPEPLTTFELYDEIKGARSSIHVMKNILKKLPAVNYMTLEFITALLLRVSQKSLLNKM 277 HSP 2 Score: 180.644 bits (457), Expect = 4.771e-46 Identity = 75/102 (73.53%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR++A EMAPVIMWQK+RKPE+YR YW++ +SPSK +MD PTYSAWDML ++ EDMDASS IPLDD +P DFGAI+++QCLIEQHN IFTDANETVWR Sbjct: 277 MDARAIATEMAPVIMWQKERKPETYRSYWNNLSRSPSKKNMDPAPTYSAWDMLSEESEDMDASSLIPLDDAMPTDFGAIDIVQCLIEQHNAIFTDANETVWR 378 HSP 3 Score: 165.622 bits (418), Expect = 8.792e-41 Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+ QWQEKATGFFS+SGVKLKEA Q+AGTFVGEVAKDAKGNV DVAE+VGS VK RWA LR+P+TRHA+QE LI+AAATTG F RKGI+ TKD+ Sbjct: 1 MPSAVSPQWQEKATGFFSTSGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTRWAILREPSTRHAMQERLITAAATTGMFFRKGISETKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: B9N0M8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24160g PE=4 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 2.479e-86 Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQ+ K +P ILV+CADYLILSG+NS LFKAEGDKKVI+QLVS YNQD NAS+PEG+NPIDVA LAK Y+ASLPEPLTTFELYDEIK ARSSIH M+N+LK LP+VNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQEFSKLVPHILVKCADYLILSGLNSVDLFKAEGDKKVIQQLVSLYNQDSNASLPEGLNPIDVAFLAKCYLASLPEPLTTFELYDEIKGARSSIHVMKNILKKLPAVNYMTLEFITALLLRVSQKSLLNKM 277 HSP 2 Score: 175.637 bits (444), Expect = 3.138e-44 Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR++A EMAPVIMWQK+RKPE+YR YW++ +SPSK +MD PTYSAWDML + EDMDASS IPLDD +P DFGAI+++QCLIEQHN IFTDANETVWR Sbjct: 277 MDARAIATEMAPVIMWQKERKPETYRSYWNNLSRSPSKKNMDPAPTYSAWDMLS-ESEDMDASSLIPLDDAMPTDFGAIDIVQCLIEQHNAIFTDANETVWR 377 HSP 3 Score: 165.622 bits (418), Expect = 8.453e-41 Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+ QWQEKATGFFS+SGVKLKEA Q+AGTFVGEVAKDAKGNV DVAE+VGS VK RWA LR+P+TRHA+QE LI+AAATTG F RKGI+ TKD+ Sbjct: 1 MPSAVSPQWQEKATGFFSTSGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTRWAILREPSTRHAMQERLITAAATTGMFFRKGISETKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: B9R9W7_RICCO (Rho GTPase activator, putative OS=Ricinus communis GN=RCOM_1501010 PE=4 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 5.529e-85 Identity = 137/170 (80.59%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAK+TAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQ++ +PIP ILV+CADYLILSG+NS LFKAEGD K I+QL+S YNQD +AS+PEGVNP+DVAAL K+Y+ASLPEPLTTFELY+EIK ARSSI+AM+N+LK LP+VNYMTLE ITALLLRVSQKS+LNK+ Sbjct: 99 EVAKRTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQESSRPIPHILVKCADYLILSGLNSMQLFKAEGDIKAIQQLISIYNQDASASLPEGVNPLDVAALIKFYLASLPEPLTTFELYNEIKGARSSIYAMKNILKKLPTVNYMTLELITALLLRVSQKSLLNKM 268 HSP 2 Score: 176.022 bits (445), Expect = 1.970e-44 Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAME APVIMW+K++KPE YR++W+ + SK SMD P YS WDML ++GE MDASS IPLDDG P+DFGAIEVIQCLIEQHN IFTDANETVWR Sbjct: 268 MDARSLAMETAPVIMWRKEQKPEIYRQFWNQASRYSSKKSMDQAPVYSEWDMLSEEGEGMDASSAIPLDDGTPMDFGAIEVIQCLIEQHNAIFTDANETVWR 369 HSP 3 Score: 119.783 bits (299), Expect = 1.738e-25 Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 3 Query: 384 GVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 G KLKEA Q+AGT VG+ AKDAK NV D AERVGS VK++W FLR+PATRH +QE LI+AAATTG FLRKG++GTKD+ Sbjct: 12 GTKLKEAGQSAGTLVGDFAKDAKVNVADAAERVGSAVKSQWTFLREPATRHILQEQLITAAATTGMFLRKGMSGTKDK 89
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: K7LWP4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 2.145e-83 Identity = 136/170 (80.00%), Postives = 152/170 (89.41%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAK TAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQ KPIP IL+ CADYLI+SG+NS +LFK+EGDKKVI QLVS YNQD AS+PEG P+DVAAL KYY+ASLPEPLTT ELY+EI+ ARSSI++MRN+LK L SVNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 53 EVAKITAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQDCCKPIPQILINCADYLIVSGLNSPHLFKSEGDKKVIHQLVSLYNQDSTASVPEGTTPVDVAALVKYYLASLPEPLTTLELYNEIRGARSSIYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKM 222 HSP 2 Score: 168.318 bits (425), Expect = 3.256e-42 Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTP-TYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR LAMEMAPVIMWQK+R PE Y +YW+ KSPSK S+D P +Y+AWDML DDGE +DASS IPLDDG PVDFGAIEV+Q LIE HN IFTDANETVW+ Sbjct: 222 MDARCLAMEMAPVIMWQKERTPEFYHQYWNQMSKSPSKKSVDPPPGSYTAWDMLADDGEAIDASSPIPLDDGTPVDFGAIEVVQLLIEHHNAIFTDANETVWK 324 HSP 3 Score: 72.4034 bits (176), Expect = 3.248e-10 Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 489 MVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MVK+RWA L+QP+TRHAVQ+ ISAAATTGT LR+G +GTKD+ Sbjct: 1 MVKSRWALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDK 43
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A058ZWR2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00134 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.431e-83 Identity = 132/170 (77.65%), Postives = 159/170 (93.53%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTI+TDIERWQKGVASTDVFGVPIEVTV R+++ +PIP ILV+CADYL+LSG+N+ YLFK+EGDKKVI+QLVS++N D NAS+P+GVNP+D+AAL K Y+ASLPEPLTTFELY+EIK ARSSI+AMRN+LK LP+VN+MTLE+ITALL RVSQKS+LNK+ Sbjct: 108 EVAKKTAQKSKTIITDIERWQKGVASTDVFGVPIEVTVHREESSRPIPQILVKCADYLVLSGLNAPYLFKSEGDKKVIQQLVSSFNLDSNASLPDGVNPVDIAALVKCYLASLPEPLTTFELYEEIKGARSSINAMRNILKKLPTVNFMTLEYITALLHRVSQKSLLNKM 277 HSP 2 Score: 151.369 bits (381), Expect = 6.385e-36 Identity = 66/102 (64.71%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDA+SLAME AP+IMWQ +KPE YR+YW+ P + D PTYSAWDML ++ + ASS IPLDDG P+DFGAIEV+QCLI+ HN IFTDANETVWR Sbjct: 277 MDAQSLAMEFAPLIMWQNGQKPEYYRQYWNDP--RTGQNGTDKAPTYSAWDMLAEEDDTAIASSMIPLDDGTPMDFGAIEVVQCLIQHHNAIFTDANETVWR 376 HSP 3 Score: 146.747 bits (369), Expect = 2.059e-34 Identity = 70/98 (71.43%), Postives = 83/98 (84.69%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MP + QW++KA+GFFSSSGVKLKEA QTAGTFVGEVAKDAKGNV +VA RVG VK+RW L+QP+TRHA+QE LI AAA+TG+ LRKGI+ TKD+ Sbjct: 1 MPLPFSPQWKDKASGFFSSSGVKLKEAGQTAGTFVGEVAKDAKGNVAEVAGRVGLSVKSRWTLLQQPSTRHAMQERLIEAAASTGSILRKGISETKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: I1LVH2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 5.927e-83 Identity = 136/170 (80.00%), Postives = 152/170 (89.41%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAK TAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQ KPIP IL+ CADYLI+SG+NS +LFK+EGDKKVI QLVS YNQD AS+PEG P+DVAAL KYY+ASLPEPLTT ELY+EI+ ARSSI++MRN+LK L SVNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 108 EVAKITAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQDCCKPIPQILINCADYLIVSGLNSPHLFKSEGDKKVIHQLVSLYNQDSTASVPEGTTPVDVAALVKYYLASLPEPLTTLELYNEIRGARSSIYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKM 277 HSP 2 Score: 168.703 bits (426), Expect = 8.282e-42 Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTP-TYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR LAMEMAPVIMWQK+R PE Y +YW+ KSPSK S+D P +Y+AWDML DDGE +DASS IPLDDG PVDFGAIEV+Q LIE HN IFTDANETVW+ Sbjct: 277 MDARCLAMEMAPVIMWQKERTPEFYHQYWNQMSKSPSKKSVDPPPGSYTAWDMLADDGEAIDASSPIPLDDGTPVDFGAIEVVQLLIEHHNAIFTDANETVWK 379 HSP 3 Score: 152.91 bits (385), Expect = 1.699e-36 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPS ++ QWQ+KA GFFSSSGVKLKEA ++AGTFVGEV KD K NV +VA RVGSMVK+RWA L+QP+TRHAVQ+ ISAAATTGT LR+G +GTKD+ Sbjct: 1 MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSRWALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: M1BMK2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018852 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 7.566e-83 Identity = 132/170 (77.65%), Postives = 154/170 (90.59%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKT+LTDIERWQKGVASTDVFGVPI++ VQRQQ+ + +P I+V+CADYL+LSG+NS LFKAEGDKKVI QLVS YNQD NA IPEGVNP+D+AAL K Y+ASLPEPLTTFELY+EI+ ARSSIHAM+N LK +P+VNYMTLE ITALLLRVSQKS++NK+ Sbjct: 108 EVAKKTAQKSKTLLTDIERWQKGVASTDVFGVPIDILVQRQQSTRSVPFIMVKCADYLVLSGLNSPELFKAEGDKKVIHQLVSYYNQDQNAPIPEGVNPVDIAALMKCYLASLPEPLTTFELYNEIRGARSSIHAMKNTLKKIPTVNYMTLELITALLLRVSQKSLVNKM 277 HSP 2 Score: 153.295 bits (386), Expect = 1.532e-36 Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR+LA EMAP+++WQ+ + P Y ++W+H KS SK +DS SAW+MLED+ E+ DASS IPLDDG P+D GAI+ IQCLIE HN IFTDANETVWR Sbjct: 277 MDARTLATEMAPILIWQRGQSPHQYDQFWNHSAKSSSKKHIDSNSNSSAWEMLEDEDENADASSPIPLDDGQPIDLGAIDAIQCLIEHHNAIFTDANETVWR 378 HSP 3 Score: 152.525 bits (384), Expect = 2.968e-36 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPS ++ QWQEKA GFF SSGVKLKEA Q+AG+FVGEVAKDAKGNV +VAE+VGS+VK+RW+ L+QP+TRHA+QE ISAAATT FLRKG TKD+ Sbjct: 1 MPSVISPQWQEKANGFFQSSGVKLKEAGQSAGSFVGEVAKDAKGNVGEVAEKVGSVVKSRWSLLQQPSTRHAMQERFISAAATTSFFLRKGFLETKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: K4BIM0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g093430.2 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 8.997e-83 Identity = 132/170 (77.65%), Postives = 154/170 (90.59%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKT+LTDIERWQKGVASTDVFGVPI++ VQRQQ+ + +P I+V+CADYL+LSG+NS LFKAEGDKKVI QLVS YNQD NA IPEGVNP+D+AAL K Y+ASLPEPLTTFELY+EI+ ARSSIHAM+N LK +P+VNYMTLE ITALLLRVSQKS++NK+ Sbjct: 108 EVAKKTAQKSKTLLTDIERWQKGVASTDVFGVPIDILVQRQQSTRSVPFIMVKCADYLVLSGLNSPELFKAEGDKKVIHQLVSYYNQDQNAPIPEGVNPVDIAALMKCYLASLPEPLTTFELYNEIRGARSSIHAMKNTLKKIPTVNYMTLELITALLLRVSQKSLVNKM 277 HSP 2 Score: 152.525 bits (384), Expect = 2.196e-36 Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPS ++ QWQEKA+GFF SSGVKLKEA Q+AG+FVGEVAKDAKGNV +VAE+VGS+VK+RW+ L+QP+TRHA+QE ISAAATT FLRKG TKD+ Sbjct: 1 MPSVISPQWQEKASGFFQSSGVKLKEAGQSAGSFVGEVAKDAKGNVGEVAEKVGSVVKSRWSLLQQPSTRHAMQERFISAAATTSFFLRKGFLETKDK 98 HSP 3 Score: 152.525 bits (384), Expect = 2.728e-36 Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDAR+LA EMAP+++WQ+ + P Y ++W+H KS SK MDS SAW+MLED+ E++DASS IPLDDG+P+D GAI+ IQCLIE HN IFTDANETVWR Sbjct: 277 MDARTLATEMAPILIWQRGQSPHQYDQFWNHSAKS-SKKYMDSNSNSSAWEMLEDEDENVDASSPIPLDDGLPIDLGAIDAIQCLIEHHNAIFTDANETVWR 377
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: I1KZQ6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.015e-82 Identity = 136/170 (80.00%), Postives = 152/170 (89.41%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAK TAQKSKTILTDIERWQKGVASTD+FGVPIEVT QRQ KPIP ILV+C DYLI+SG+NS LFK+EGDKKVI QLVS YNQD AS+PEG NP+DVAAL KYY+ASLPEPLTT ELY+EI+SARSSI++MRN+LK L SVNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 108 EVAKITAQKSKTILTDIERWQKGVASTDLFGVPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEGDKKVIHQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSIYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKM 277 HSP 2 Score: 164.851 bits (416), Expect = 1.751e-40 Identity = 74/103 (71.84%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTP-TYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQK+R+PE Y +YW+ KS S ++D TP +Y+AWDML DDGE DASS IPLDDG PVDFGAIEV+Q L E HN IFTDANETVW+ Sbjct: 277 MDARSLAMEMAPVIMWQKERRPEFYHQYWNQVSKSLSNKTVDPTPGSYTAWDMLADDGEATDASSPIPLDDGTPVDFGAIEVVQLLTEHHNAIFTDANETVWK 379 HSP 3 Score: 152.91 bits (385), Expect = 1.939e-36 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPS ++ QWQ+KA GFFSSSGVKLKEA ++AGTFVGEV KD K NV +VA RVGSMVK+RWA L+QP+TRHAVQ+ ISAAATTGT LR+G +GTKD+ Sbjct: 1 MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSRWALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0B2S2F6_GLYSO (Putative Rho GTPase-activating protein OS=Glycine soja GN=glysoja_015278 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.068e-82 Identity = 136/170 (80.00%), Postives = 152/170 (89.41%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAK TAQKSKTILTDIERWQKGVASTD+FGVPIEVT QRQ KPIP ILV+C DYLI+SG+NS LFK+EGDKKVI QLVS YNQD AS+PEG NP+DVAAL KYY+ASLPEPLTT ELY+EI+SARSSI++MRN+LK L SVNYMTLEFITALLLRVSQKS+LNK+ Sbjct: 108 EVAKITAQKSKTILTDIERWQKGVASTDLFGVPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEGDKKVIHQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSIYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKM 277 HSP 2 Score: 162.155 bits (409), Expect = 1.412e-39 Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTP-TYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQK+R+PE Y +YW+ KS S ++D P +Y+AWDML DDGE DASS IPLDDG PVDFGAIEV+Q L E HN IFTDANETVW+ Sbjct: 277 MDARSLAMEMAPVIMWQKERRPEFYHQYWNQVSKSLSNKTVDPPPGSYTAWDMLADDGEATDASSPIPLDDGTPVDFGAIEVVQLLTEHHNAIFTDANETVWK 379 HSP 3 Score: 152.91 bits (385), Expect = 1.903e-36 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPS ++ QWQ+KA GFFSSSGVKLKEA ++AGTFVGEV KD K NV +VA RVGSMVK+RWA L+QP+TRHAVQ+ ISAAATTGT LR+G +GTKD+ Sbjct: 1 MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSRWALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDK 98 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094274 ID=g.barbadense_cottongen_reftransV1_0094274; Name=g.barbadense_cottongen_reftransV1_0094274; organism=Gossypium barbadense; type=contig; length=2888bpback to top |