g.barbadense_cottongen_reftransV1_0094274, g.barbadense_cottongen_reftransV1_0094274 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG25_HUMAN (Rho GTPase-activating protein 25 OS=Homo sapiens GN=ARHGAP25 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.559e-10 Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 1339 DIERWQK---GVAST--DVFGVPIEVTVQRQQAIKP--IPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYD---------EIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 ++E W K VA T VFG ++ TV +Q P +P+++ +CA++++ G N + +F+ G +++QL A++ S + VA+L K Y+ LPEP+ + Y+ A++ M+ L +LP NY L +I L + +NK+ V Sbjct: 138 EMEEWVKFLRRVAGTPCGVFGQRLDETVAYEQKFGPHLVPILVEKCAEFILEHGRNEEGIFRLPGQDNLVKQLRDAFDAGERPSFDRDTDVHTVASLLKLYLRDLPEPVVPWSQYEGFLLCGQLTNADEAKAQQELMKQ-LSILPRDNYSLLSYICRFLHEIQLNCAVNKMSV 309
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG01_HUMAN (Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.891e-10 Identity = 43/149 (28.86%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDV-AALAKYYIASLPEPLTTFELYDEI-------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ ++ +PIP++L YL + ++ +F+ + +V+ ++ YN + N + + A + K ++ LPEPL TF+LY + +S R + A VL+ LP NY L F+TA L+++S S NK+ Sbjct: 242 FGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDF-DQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQR--VPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKM 387
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_HUMAN (Rho GTPase-activating protein 24 OS=Homo sapiens GN=ARHGAP24 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.248e-10 Identity = 45/178 (25.28%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ V Sbjct: 108 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSV 285
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG01_MOUSE (Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.163e-10 Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDV-AALAKYYIASLPEPLTTFELYDEI-------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ ++ PIP++L YL + ++ +F+ + +V+ ++ YN + N + + A + K ++ LPEPL TF+LY + +S R + + VL+ LP NY L F+TA L+++S NK+ Sbjct: 242 FGVSLQHLQEKSPGQDPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDF-DQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQR--VEVTQQVLQTLPEENYQVLHFLTAFLVQISAHCDQNKM 387
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_RAT (Rho GTPase-activating protein 24 OS=Rattus norvegicus GN=Arhgap24 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.307e-10 Identity = 44/176 (25.00%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ Sbjct: 107 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELTKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKM 282
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG24_MOUSE (Rho GTPase-activating protein 24 OS=Mus musculus GN=Arhgap24 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.075e-9 Identity = 44/176 (25.00%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1327 TILTDIERWQK-------GVASTDVFGVPIEVTV--QRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI--------KSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + D+E W K G +FG +E TV +++ + P+++ +C D++ G+ + LF+ G ++++L A++ S + VA+L K Y+ LPEP+ + Y++ K + + + +K LP VNY L++I L V S +NK+ Sbjct: 106 STQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELMKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKM 281
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RBP1_MOUSE (RalA-binding protein 1 OS=Mus musculus GN=Ralbp1 PE=1 SV=4) HSP 1 Score: 63.5438 bits (153), Expect = 7.190e-9 Identity = 42/152 (27.63%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 1378 VFGVPIEVTVQRQQAIKPI--PLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNV------LKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 +FGVP+ V+R + P + C DY+ G+ + +++ G K +++L +AY+++ + ++ E P VA+L K Y+ LPE L T EL + A M V L+ LP N++ L ++ L V K + K+ + Sbjct: 189 IFGVPLVDAVERTMMYDGVRLPAVFRECVDYMEKHGMKCEGVYRVSGIKSKVDELKAAYDREESPNL-EEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGKTTEMEKVQEFQRLLRELPECNHLLLSWLIVHLDHVIAKELETKMNI 339
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RBP1_HUMAN (RalA-binding protein 1 OS=Homo sapiens GN=RALBP1 PE=1 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 8.521e-9 Identity = 40/152 (26.32%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 1378 VFGVPIEVTVQRQQAIKPI--PLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSA------RSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809 +FG+P+ V+R I P + C DY+ G+ + +++ G K +++L +AY+++ + ++ E P VA+L K Y+ LPE L T EL + A + + +LK LP NY+ + ++ + V K + K+ + Sbjct: 189 IFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNL-EDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNI 339
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG08_HUMAN (Rho GTPase-activating protein 8 OS=Homo sapiens GN=ARHGAP8 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.646e-8 Identity = 40/146 (27.40%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 1381 FGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI---KSARSSIH--AMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 FGV ++ + Q + IP +L YL G+ ++ LF+ + + ++ YNQ + + + A + K ++ LP+PL TF+ Y++I SS+ R +L+ LP NY+ L ++ L VS++S+ NK+ Sbjct: 224 FGVSLQYLKDKNQG-ELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTVREIQRLYNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITCVESSLRVTGCRQILRSLPEHNYVVLRYLMGFLHAVSRESIFNKM 368
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG44_HUMAN (Rho GTPase-activating protein 44 OS=Homo sapiens GN=ARHGAP44 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.195e-8 Identity = 44/174 (25.29%), Postives = 82/174 (47.13%), Query Frame = 1 Query: 1324 KTILTDIERWQKGVASTDVFGVPIE--VTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYN------QDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDE------IKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + +L I+ Q+ FG P+E +T+ ++ PI C L+ G+ + LF+ +++L +A + Q+++A +P +A K Y+ LPEPL TFELYDE ++ + A+ N + LP N+ + ++ L ++S+ +NK+ Sbjct: 234 QAVLPQIKAQQEAWVEKPSFGKPLEEHLTISGREIAFPI----EACVTMLLECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQEYSA------DPHAIAGALKSYLRELPEPLMTFELYDEWIQASNVQEQDKKLQALWNACEKLPKANHNNIRYLIKFLSKLSEYQDVNKM 397
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0D2TA56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 6.487e-105 Identity = 167/170 (98.24%), Postives = 170/170 (100.00%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILV+CADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+ Sbjct: 108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVKCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 277 HSP 2 Score: 231.106 bits (588), Expect = 5.865e-64 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLA+EMAPVIMWQKDRKPESYRKYWSHP KSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR Sbjct: 277 MDARSLALEMAPVIMWQKDRKPESYRKYWSHPLKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 378 HSP 3 Score: 197.978 bits (502), Expect = 3.626e-52 Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVK+RWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR Sbjct: 1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKSRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0B0NPG4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03900 PE=4 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.982e-104 Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQD NASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+ Sbjct: 108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDLNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 277 HSP 2 Score: 236.884 bits (603), Expect = 5.733e-66 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR Sbjct: 277 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 378 HSP 3 Score: 200.675 bits (509), Expect = 4.428e-53 Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR Sbjct: 1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0D2U777_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 7.423e-97 Identity = 167/198 (84.34%), Postives = 170/198 (85.86%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQ----------------------------DFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILV+CADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQ DFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+ Sbjct: 108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVKCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQGILHVICYNLTRNYSIWIVIICRHMYITDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 305 HSP 2 Score: 218.394 bits (555), Expect = 4.361e-59 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLA+EMAPVIMWQKDRKPESYRKYWSHP KSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR Sbjct: 305 MDARSLALEMAPVIMWQKDRKPESYRKYWSHPLKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 406 HSP 3 Score: 197.978 bits (502), Expect = 5.872e-52 Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVK+RWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR Sbjct: 1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKSRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A061FZY2_THECC (Small G protein family protein / RhoGAP family protein isoform 3 OS=Theobroma cacao GN=TCM_014873 PE=4 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 4.151e-93 Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSK ILTDIERWQKGVASTDVFGVPIE TVQRQQ+ +PIPLILV+CADYLILSG+NSQYLFKAEGDKKVI+QLVS YNQDFNASIPEGV+ IDVAALAKYYIASLPEPLTTFELY+EIK ARSSIHAMRNVLK LPSVNYMTLEF+TALLL VSQKSVLN + Sbjct: 69 EVAKKTAQKSKIILTDIERWQKGVASTDVFGVPIEDTVQRQQSNRPIPLILVKCADYLILSGLNSQYLFKAEGDKKVIQQLVSTYNQDFNASIPEGVSAIDVAALAKYYIASLPEPLTTFELYNEIKGARSSIHAMRNVLKKLPSVNYMTLEFVTALLLCVSQKSVLNNM 238 HSP 2 Score: 217.624 bits (553), Expect = 1.182e-59 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVW 2514 MDARSLAMEMAPVIMW+K +KPESYRKYWS PPKSPSKGSMDSTP Y+AWDML DDGEDMDASSHIPLDDG+PVDFGAIEVIQCLIEQHNPIFTDANETVW Sbjct: 238 MDARSLAMEMAPVIMWEKGQKPESYRKYWSRPPKSPSKGSMDSTPAYTAWDMLADDGEDMDASSHIPLDDGMPVDFGAIEVIQCLIEQHNPIFTDANETVW 338 HSP 3 Score: 114.005 bits (284), Expect = 1.113e-23 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 3 Query: 444 DAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 DAKGNV DVAERVGSMVK+RWA LRQPATRHAVQESLISAAATTGTFLRKGITGTKD+ Sbjct: 2 DAKGNVADVAERVGSMVKSRWAVLRQPATRHAVQESLISAAATTGTFLRKGITGTKDK 59
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A061G703_THECC (Small G protein family protein / RhoGAP family protein isoform 1 OS=Theobroma cacao GN=TCM_014873 PE=4 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 9.528e-93 Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 +VAKKTAQKSK ILTDIERWQKGVASTDVFGVPIE TVQRQQ+ +PIPLILV+CADYLILSG+NSQYLFKAEGDKKVI+QLVS YNQDFNASIPEGV+ IDVAALAKYYIASLPEPLTTFELY+EIK ARSSIHAMRNVLK LPSVNYMTLEF+TALLL VSQKSVLN + Sbjct: 108 EVAKKTAQKSKIILTDIERWQKGVASTDVFGVPIEDTVQRQQSNRPIPLILVKCADYLILSGLNSQYLFKAEGDKKVIQQLVSTYNQDFNASIPEGVSAIDVAALAKYYIASLPEPLTTFELYNEIKGARSSIHAMRNVLKKLPSVNYMTLEFVTALLLCVSQKSVLNNM 277 HSP 2 Score: 218.394 bits (555), Expect = 1.949e-59 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVW 2514 MDARSLAMEMAPVIMW+K +KPESYRKYWS PPKSPSKGSMDSTP Y+AWDML DDGEDMDASSHIPLDDG+PVDFGAIEVIQCLIEQHNPIFTDANETVW Sbjct: 277 MDARSLAMEMAPVIMWEKGQKPESYRKYWSRPPKSPSKGSMDSTPAYTAWDMLADDGEDMDASSHIPLDDGMPVDFGAIEVIQCLIEQHNPIFTDANETVW 377 HSP 3 Score: 189.119 bits (479), Expect = 5.147e-49 Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVA DAKGNV DVAERVGSMVK+RWA LRQPATRHAVQESLISAAATTGTFLRKGITGTKD+ Sbjct: 1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAMDAKGNVADVAERVGSMVKSRWAVLRQPATRHAVQESLISAAATTGTFLRKGITGTKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: M5X394_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009450mg PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 4.162e-91 Identity = 143/171 (83.63%), Postives = 159/171 (92.98%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVG 1806 +VAKKTAQKSKTIL+DIERWQKGVASTDVFGVPIEVTVQRQQ+ +PIP ILV+CADYLILSG+N+ YLFK EGDKKVI+QLVS YNQD NAS+PEG+NPIDVAAL K Y+A+LPEPLTTFELY+EIK ARSSIHAMRN+L+ LP+VNY TLEFITALLLRVSQKSVLNK G Sbjct: 108 EVAKKTAQKSKTILSDIERWQKGVASTDVFGVPIEVTVQRQQSSRPIPHILVKCADYLILSGLNTPYLFKGEGDKKVIQQLVSLYNQDSNASLPEGINPIDVAALIKCYLATLPEPLTTFELYNEIKGARSSIHAMRNMLRRLPTVNYTTLEFITALLLRVSQKSVLNKAG 278 HSP 2 Score: 151.754 bits (382), Expect = 7.414e-37 Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSA + +WQEKA+GFFS+SGVKLKEA Q+AGTFV EV KDAK NVTD+A RVGSM K+RWA L+QP+TRHAVQE LI+AAATTGT RKG++ TKD+ Sbjct: 1 MPSATSPRWQEKASGFFSTSGVKLKEAGQSAGTFVEEVTKDAKVNVTDMAGRVGSMFKSRWALLQQPSTRHAVQERLITAAATTGTLFRKGLSETKDK 98
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DUP8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.747e-90 Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+ Sbjct: 104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 273 HSP 2 Score: 137.887 bits (346), Expect = 1.044e-31 Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSA++ WQEKA+ FFSSSG KL+EA Q+ VGEVAKDAKGN DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+ Sbjct: 1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94 HSP 3 Score: 82.0333 bits (201), Expect = 2.289e-13 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDML 2370 MDARSLAMEMAPVIMWQK+RKPE YR+YW+H +S SK +TP + WDML Sbjct: 273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDML 324
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DQN1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 2.916e-90 Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+ Sbjct: 23 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 192 HSP 2 Score: 172.94 bits (437), Expect = 3.181e-44 Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQK+RKPE YR+YW+H +S SK +TP + WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR Sbjct: 192 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 292
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DR22_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.001e-89 Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+ Sbjct: 104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 273 HSP 2 Score: 173.326 bits (438), Expect = 1.389e-43 Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQK+RKPE YR+YW+H +S SK +TP + WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR Sbjct: 273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 373 HSP 3 Score: 137.502 bits (345), Expect = 2.476e-31 Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSA++ WQEKA+ FFSSSG KL+EA Q+ VGEVAKDAKGN DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+ Sbjct: 1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: V4S7M6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005197mg PE=4 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.315e-88 Identity = 141/170 (82.94%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803 + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ KP+P ILV+CADYL+LSG++SQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP+DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLR SQKS+LNK+ Sbjct: 104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLSSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPVDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRFSQKSLLNKM 273 HSP 2 Score: 173.711 bits (439), Expect = 1.362e-43 Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517 MDARSLAMEMAPVIMWQK+RKPE YR+YW+H +S SK +TP + WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR Sbjct: 273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 373 HSP 3 Score: 137.502 bits (345), Expect = 2.499e-31 Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3 Query: 324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617 MPSA++ WQEKA+ FFSSSG KL+EA Q+ VGEVAKDAKGN DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+ Sbjct: 1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094274 ID=g.barbadense_cottongen_reftransV1_0094274; Name=g.barbadense_cottongen_reftransV1_0094274; organism=Gossypium barbadense; type=contig; length=2888bpback to top |