g.barbadense_cottongen_reftransV1_0094272, g.barbadense_cottongen_reftransV1_0094272 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: V4TI79_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030641mg PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 4.157e-93 Identity = 217/467 (46.47%), Postives = 276/467 (59.10%), Query Frame = -3 Query: 1 VDVNLNHVKDKDSHSKREGARKAWRHDQSHVNRHLSSNSRVGHWKGNAEKSPWEDELDNQILGPEEYSLQDRLGFRPPQDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKGTSNGLSKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQLFSEG----------------------------------SDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 1299 V + + V +DS E AR R ++ ++ + +S +G + +K + D Q ++ S D+LG + P+ ++++++ LRSNT A S T+ E + G D+ K V QLH E AK SNR++ S +EF K K+NDI + ++ ++ N +E TK S V LE KIEML++ELREAA +E LYS+VAEHGSST+KVH PARRLSRFY HAC+A ++ KRASAAR AISGLVLVSKACGNDVPRLTFWLSN+++LRA VSHAIG MQL S+G SDDW + QTF++AL+K EAWIFSRIVESVWWQTLTP+MQSAA K S S+K S RR GLGD EQG+FS+ELWKKAFKDACERLCP++A GHECGCL VL Sbjct: 235 VGTDTDQVSLEDSLINLEDARITGRRGKNGLDVVGAGSSNIGILEYKEKKDQDGNGQDKQNFEVKKNSFDDKLGIKFPEGTSKREIKLRSNTLAHSRTSPEAQRGIATGDKLKHV-KSQLH--------------FESAK---------------------------SNRRLSS---------SEFMGKEKKNDISKDVYKAGMTNAHNGWEETTKGLSTRNVGLEFKIEMLQDELREAAALEVGLYSVVAEHGSSTSKVHTPARRLSRFYFHACRAMSKAKRASAARTAISGLVLVSKACGNDVPRLTFWLSNTVLLRAIVSHAIGGMQL-SDGPSTNNGDKKGLAERFTPKRQESISEIEKNNVIGESDDWENLQTFIVALEKLEAWIFSRIVESVWWQTLTPHMQSAAVKGSSSRKASGRRNGLGDQEQGNFSIELWKKAFKDACERLCPVQAGGHECGCLPVL 649 HSP 2 Score: 223.787 bits (569), Expect = 7.293e-58 Identity = 129/202 (63.86%), Postives = 151/202 (74.75%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGL+TKN+K S QV Y++ ++EI PW P QSL + S+LLQWENGD NSGS SS GKIEF E FR+ VTL E+S+K D FQKN LE YLYE K+K KGQLLGSAV+NLADYGII+E I+IS PIN KKSSRN+ QP YL I+PF K +SS++ SL KEVSL+KDGSE+ S NEGNDEE EIASFT Sbjct: 1 MVLGLKTKNKKRGSVQVDYLINLQEIRPWPPSQSLVSVHSVLLQWENGDLNSGSLASSVGGGKIEFNERFRISVTLYGEASKKGIANDSFQKNYLEIYLYETGKEKRVKGQLLGSAVINLADYGIIKEGIAISAPINFKKSSRNVAQPNFYLVIEPFYKDNSSAALNSSLLKEVSLDKDGSETFSELTNEGNDEECEIASFT 202
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: V4TNB3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030641mg PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 6.421e-93 Identity = 217/467 (46.47%), Postives = 276/467 (59.10%), Query Frame = -3 Query: 1 VDVNLNHVKDKDSHSKREGARKAWRHDQSHVNRHLSSNSRVGHWKGNAEKSPWEDELDNQILGPEEYSLQDRLGFRPPQDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKGTSNGLSKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQLFSEG----------------------------------SDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 1299 V + + V +DS E AR R ++ ++ + +S +G + +K + D Q ++ S D+LG + P+ ++++++ LRSNT A S T+ E + G D+ K V QLH E AK SNR++ S +EF K K+NDI + ++ ++ N +E TK S V LE KIEML++ELREAA +E LYS+VAEHGSST+KVH PARRLSRFY HAC+A ++ KRASAAR AISGLVLVSKACGNDVPRLTFWLSN+++LRA VSHAIG MQL S+G SDDW + QTF++AL+K EAWIFSRIVESVWWQTLTP+MQSAA K S S+K S RR GLGD EQG+FS+ELWKKAFKDACERLCP++A GHECGCL VL Sbjct: 264 VGTDTDQVSLEDSLINLEDARITGRRGKNGLDVVGAGSSNIGILEYKEKKDQDGNGQDKQNFEVKKNSFDDKLGIKFPEGTSKREIKLRSNTLAHSRTSPEAQRGIATGDKLKHV-KSQLH--------------FESAK---------------------------SNRRLSS---------SEFMGKEKKNDISKDVYKAGMTNAHNGWEETTKGLSTRNVGLEFKIEMLQDELREAAALEVGLYSVVAEHGSSTSKVHTPARRLSRFYFHACRAMSKAKRASAARTAISGLVLVSKACGNDVPRLTFWLSNTVLLRAIVSHAIGGMQL-SDGPSTNNGDKKGLAERFTPKRQESISEIEKNNVIGESDDWENLQTFIVALEKLEAWIFSRIVESVWWQTLTPHMQSAAVKGSSSRKASGRRNGLGDQEQGNFSIELWKKAFKDACERLCPVQAGGHECGCLPVL 678 HSP 2 Score: 223.787 bits (569), Expect = 8.394e-58 Identity = 129/202 (63.86%), Postives = 151/202 (74.75%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGL+TKN+K S QV Y++ ++EI PW P QSL + S+LLQWENGD NSGS SS GKIEF E FR+ VTL E+S+K D FQKN LE YLYE K+K KGQLLGSAV+NLADYGII+E I+IS PIN KKSSRN+ QP YL I+PF K +SS++ SL KEVSL+KDGSE+ S NEGNDEE EIASFT Sbjct: 1 MVLGLKTKNKKRGSVQVDYLINLQEIRPWPPSQSLVSVHSVLLQWENGDLNSGSLASSVGGGKIEFNERFRISVTLYGEASKKGIANDSFQKNYLEIYLYETGKEKRVKGQLLGSAVINLADYGIIKEGIAISAPINFKKSSRNVAQPNFYLVIEPFYKDNSSAALNSSLLKEVSLDKDGSETFSELTNEGNDEECEIASFT 202
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: M5XLX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001362mg PE=4 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.077e-91 Identity = 204/406 (50.25%), Postives = 248/406 (61.08%), Query Frame = -3 Query: 1 DNQILGPEEYSLQDRLGFRPPQDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKGTSNGLSKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLKKTEFAKKAKENDIPEKIH-CGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQLFS-----------------------------EGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 1128 D +L +EYS D+L R QD+TRKQV L+S TF S V+G + ++ K V +QL F+ S N ++ S N EF +K+KE DIPE IH CG S T + +E T FS+SKV+LES IE+L+EELREAA VE LYS+ AEHGSS NK+HAPARRLSRFY +ACK ++Q K+ +AARAAI+GL+LVSKACGNDVPRLTFWLSNSIVLR +S ++G+ Q+ + E D W DPQ F+ AL+KFE WIFSRIVESVWWQ +TPYMQSAAAK S S+K R+YGLG EQG+FS+ELWKKAFKDACERLCP RA GHECGCL +L Sbjct: 215 DGHLLKVKEYSFDDKLASRFSQDATRKQVRLKSETFTISRNTVGVQGSKVKSNELKHVKSLQL-------------PFV-----------------------------SAQNNRLPSNN--------EFVEKSKEADIPEDIHVCGMISGTSER-EETTTRFSDSKVDLESTIELLKEELREAAAVEVGLYSVAAEHGSSANKIHAPARRLSRFYFNACKTSSQAKKGNAARAAITGLILVSKACGNDVPRLTFWLSNSIVLRGIISQSLGKPQISARPRTKINAGGLLSAKNGFPLHKEENDRTLESFDTWEDPQIFMAALEKFEGWIFSRIVESVWWQNMTPYMQSAAAKGSSSRKTYGRKYGLGGHEQGNFSMELWKKAFKDACERLCPARAGGHECGCLPLL 569 HSP 2 Score: 220.705 bits (561), Expect = 4.269e-57 Identity = 129/202 (63.86%), Postives = 156/202 (77.23%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLG+RTK+RK + QV Y+++V+EI PW ++L + QS+LLQWENGD+ SGS + +GKIEFGESF L VTL E SRKST RD +QKN LEFYLYEPRKDK KGQLL SAV+NLADYGII ET ++STP+N KKS ++ QPVLY+ +QP K SSS S KGSL +EVSLE DG+ESV S+N+GND EIASFT Sbjct: 1 MVLGIRTKSRKSTAVQVDYLIHVQEIKPWPSSKALRSVQSVLLQWENGDQVSGSFTCNVGDGKIEFGESFTLPVTLYREKSRKSTVRDTYQKNNLEFYLYEPRKDKAVKGQLLASAVINLADYGIIIETRNVSTPLNWKKSFKSSAQPVLYVNVQPCVKPSSSLSPKGSLSREVSLENDGTESVPESMNDGND---EIASFT 199
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: B9HT98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s06780g PE=4 SV=2) HSP 1 Score: 317.39 bits (812), Expect = 3.406e-90 Identity = 205/405 (50.62%), Postives = 260/405 (64.20%), Query Frame = -3 Query: 1 PQDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKGT-SNGLSKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLK--------------------KTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTK-SFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQLFS---------------------------EGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 1068 P+D+++KQ LRSNT A + TA V+G D+ K + VQL + + QF+EKAK+ I E + G RE++ + + +S + +LK K + +K KE D+PE ++ S +K +E TK +FS +KVELESK+EMLEEEL EAA VE LYS+VAEHGSS NKV APARRLSRFYL+AC+A + KRA+AARA ISGL+LVSKACGNDVPRLTFWLSNSIVLRA VS A+ ++QL S E D+W +PQ ++ AL+K EAWIFSRIVESVWWQTLTP+MQS A KSS S+K ++R+GLGD EQG+F+++LWKKAF+DACERLCP+RA GHECGCL VL Sbjct: 233 PEDASKKQAKLRSNTLALNRTAIGVQGT-TRRDKLKHLKSVQLQFNSAEGEDPFINSQFIEKAKKINISENVNKGAKGYPRSEREKSTKGSYDNQGESNSEVEILKEELSRAAAKDGLAEQGNSKIKFQLMEKEKEIDLPENVNKVDMSYEQSKREEETKGNFSGNKVELESKVEMLEEELMEAAAVEVGLYSVVAEHGSSINKVLAPARRLSRFYLYACEAGSWAKRANAARAIISGLILVSKACGNDVPRLTFWLSNSIVLRAIVSQAVEKLQLASVPSSINNGGPKGRQESTLTEGEKTNKTESLDEWAEPQPYIAALEKVEAWIFSRIVESVWWQTLTPHMQSTAVKSSNSRKTHAKRHGLGDQEQGNFAIDLWKKAFRDACERLCPVRAGGHECGCLPVL 636 HSP 2 Score: 220.705 bits (561), Expect = 5.844e-57 Identity = 125/202 (61.88%), Postives = 154/202 (76.24%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGLR+KNRKG+S Q+ Y++ V+EI PW P QSL ++QSLLLQWENGD++SGS S+ +G++EF ESFRL TL E SRK T RD F KN LEF LYE RKDK KGQLLGSAV+NLADYGII + ++I+ PI+ KKSSR++ VLY+ IQPF + + SL K+VSL+KDGSE+VS NEGND+E EIASFT Sbjct: 1 MVLGLRSKNRKGSSVQLDYLILVQEIKPWPPSQSLKSSQSLLLQWENGDQSSGSFTSNVGDGRVEFSESFRLSATLCKEVSRKGTARDSFLKNYLEFNLYESRKDKAMKGQLLGSAVINLADYGIIMDAVTINAPIHFKKSSRSMVPAVLYVNIQPF------ARDRSSLSKQVSLDKDGSETVSEVTNEGNDDEVEIASFT 196
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: F6HG59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02810 PE=4 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.337e-88 Identity = 211/382 (55.24%), Postives = 239/382 (62.57%), Query Frame = -3 Query: 1 QDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKGTSNGLSKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQLFS---------------------EGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXX------XXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 1065 QD TRKQVALRSNT A + E++G N + K V VQL E+AK GLL+ + +K KE DI E H + ++ KE +FS+SKVE+ES+I+MLEEELREAA +E LYS+VAEHGSSTNKVHAPARRLSRFYLHACKA TQ KRASAARAA SGLVLVSKACGNDVPRLTFWLSNSIVLRATVS A+ EM L + E SDDW DPQTF+L L+K E WIFSRI+ESVWWQTLTPYMQS AAK S S+K RR+ LGD EQG+FS+ELWK+AFKDACERLCP RA GHECGCL VL Sbjct: 298 QDVTRKQVALRSNTLAFNKRVPEMQGSLATNHKLKHVKSVQLS--------------YERAK------------------------------------PVGLLEHSPLMEKEKEIDIQEDSHKDAKGFAASERKERINNFSDSKVEVESRIKMLEEELREAAAIEVGLYSVVAEHGSSTNKVHAPARRLSRFYLHACKARTQAKRASAARAAASGLVLVSKACGNDVPRLTFWLSNSIVLRATVSQAVVEMPLSAGPSTRSGGGRNRYNKEENNARESSDDWEDPQTFILVLEKIEGWIFSRIIESVWWQTLTPYMQSTAAKISDGSRGSNSRKTYGRRHSLGDQEQGNFSIELWKRAFKDACERLCPTRAGGHECGCLPVL 629 HSP 2 Score: 220.32 bits (560), Expect = 7.459e-57 Identity = 130/202 (64.36%), Postives = 154/202 (76.24%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGLRTKNRKG +V YIV+V+EI PW P QSL + QS++ QWENGD+ SG S NG+IEF ESFRL V L + KS RD FQKNCLEF LYEPRKDK KGQ+LGSA++NLADYGII E I+ISTP++ KKS RN+ QPV++L IQPF K S+SSSS SL KE SL++DG ESVS ++E N+EE EIASFT Sbjct: 1 MVLGLRTKNRKGVLVKVDYIVHVQEIKPWPPSQSLRSVQSVVFQWENGDQASGFLSCSVGNGRIEFSESFRLPVALYKDG--KSRGRDSFQKNCLEFNLYEPRKDKAGKGQVLGSAIINLADYGIIEEAITISTPLSCKKSHRNMVQPVIFLKIQPFAKDSTSSSSVVSLSKEASLDQDGGESVSELMSEENNEEVEIASFT 200
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: W9RK78_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006756 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.320e-78 Identity = 162/278 (58.27%), Postives = 201/278 (72.30%), Query Frame = -3 Query: 1 LLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIG------------------------EMQLFSEGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 762 + TEF +K K ++ + H ++ + +E S SN K EL+++IEML+EELREAA VE LYS+VAEHGSSTNK+HAPARR+SRFY HACKA++ K+A+A RAA+SG +LVSKACGNDVPRLTFWLSNSI+LRA VS +G E + E DDW D QTFL+AL+KFE+WIFSRIVESVWWQT+TP+MQ AAAK S S+K+S ++YG GD E+G+ S+ELWKKAFKDAC+RLCP RA GHECGCL V+ Sbjct: 453 VFDNTEFIEKPKRAELSKGTHDDGMTNALSIEEETKSSVSNRKGELKAEIEMLKEELREAAAVEVGLYSVVAEHGSSTNKIHAPARRISRFYFHACKASSLAKKANAVRAAVSGFILVSKACGNDVPRLTFWLSNSIMLRAIVSQTVGNLSDGPGVDNSGILGQNGFTPQREEKKAKKESIDDWDDHQTFLIALEKFESWIFSRIVESVWWQTMTPHMQPAAAKGSSSRKSSGKKYGFGDHERGNISIELWKKAFKDACQRLCPSRAGGHECGCLPVI 730 HSP 2 Score: 243.432 bits (620), Expect = 2.984e-64 Identity = 197/516 (38.18%), Postives = 282/516 (54.65%), Query Frame = -3 Query: 751 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHE-KIGLELANGGIGRLG--LSLPSD-GTSANSGVSPAVEAFKQVNGNTSHLSSMYLSSNPENPVSHPMGKVSSSEACVAVPVDVNLNHVKDKDSHSKREGARKAWRHD-QSHVNR-HLSSNSRVGHWKGNAEKSPWEDELDNQILGPEEYSL---------------QDRLGFRPPQDSTRKQVALRSNTFASSSTATEVKGGFLANDRQKRVIPVQLHVDKG-TSNGL--SKIQFMEKAKENYIPEKTSNGTTSDILGAREETANSFSNRKVDSGNSYGLLKK 2226 MVLG+R+K+RK + +V Y+++V+EI PW+ QS +A S+ LQWENGD+ SGS S +GKIEF ESFRL V L E+S+K R+ +QKN LEFYLYE RKDK KGQLLGSAV+NLADYGIIRETIS++ P+N KKSS+N QPVLY+ IQPF SS SS GSL KE SL+ DG E+VS +I +GNDEE EIASFTDD S S + +S + S + + KI E + R LS+ S +AN+G P + N ++ ++S++ SSNP NP + + A +P D ++ +K +H R + ++ D VN+ + ++ + + K L N++ YS +D+ +R +D + S+T++S V + N++ K V VQL + TS L +F+EK K + + T + ++ L EET +S SNRK + +LK+ Sbjct: 1 MVLGIRSKSRKSVTIEVDYLIHVQEIKPWSLPQSQKSALSVFLQWENGDQASGSLTSGVGDGKIEFAESFRLPVVLCKEASKKGQARESYQKNNLEFYLYETRKDKAMKGQLLGSAVINLADYGIIRETISVTAPVNCKKSSKNSGQPVLYINIQPFGNASSGSSPMGSLSKEASLDNDGGETVSEAILDGNDEEAEIASFTDDDVANDVSSHSPHIINSSAFETTVSSTPNSVKIEPETTKYEVERNAGELSIASRVEPAANTGSIPLAKTVNTRNESSPYMSTIGYSSNPGNPANDNV-------AFPYIPQDRSVPILKKSLTHVVRSSSSLGYQDDPHKAVNKVRVDGRHQMRKYAQESSKDNIVANLTNKLASSSLYSQEGAERIHKDLQATQEEDKNVWRRTEDGQEEASTNDSSTYSSRHIG--VARSIVKNNKLKHVKSVQLPSETTKTSRPLVFDNTEFIEKPKRAELSKGTHDDGMTNALSIEEETKSSVSNRKGELKAEIEMLKE 507
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: K7LK53_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.064e-77 Identity = 154/266 (57.89%), Postives = 200/266 (75.19%), Query Frame = -3 Query: 1 SGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAI------GEMQLFSEGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 780 S +YG+ + +A+E + +H G++ C++ SF N++ EL++++EML+EELREAA +E S+YS++AEHGSS+NKVHAPARRLSRFY HAC+ + D ASAA++A+SG VLVSKACGNDVPRLTFW SN I+LRA VS + + + W DP+TFL+AL+K EAWIFSRIVESVWWQTLTPYMQSAAAKSS S+K +RY +GD +QG+FS++LWK+AFKDACER+CP+RA GHECGCL V+ Sbjct: 574 SAENYGMFSSNQTHIQAEEINTTNDVHVGTS---CHEDVNVNGSFLNNETELKAEVEMLQEELREAAALEVSMYSVIAEHGSSSNKVHAPARRLSRFYFHACRVGSPDTMASAAQSAVSGFVLVSKACGNDVPRLTFWFSNLILLRAIVSKEVERDGNGNTLHKEEKPFHSWEDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKSSSSRKAYEKRYRVGDQDQGNFSIDLWKRAFKDACERICPLRAGGHECGCLPVI 836 HSP 2 Score: 194.512 bits (493), Expect = 2.912e-48 Identity = 127/202 (62.87%), Postives = 152/202 (75.25%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGLR+K+RK S QV+YI++V EI PW P QSL + QS+ LQWENGDKNSGS S+ NGKIEF ESFRL V + E+S+K + + FQKNCLEFYLY DK K QLLGSA+VNLAD+GII+ET ++S N KKS RN QP LY+TIQPFD SSSSS SL KE+SLEK+GSESVS S+ + D++ EIASFT Sbjct: 1 MVLGLRSKSRKRVSIQVHYIIHVLEIKPWPPSQSLRSVQSVFLQWENGDKNSGSLPSTAGNGKIEFNESFRLSVLMCREASKKGKHPESFQKNCLEFYLY----DKTVKSQLLGSAIVNLADFGIIKETKALSIVFNCKKSFRNSSQPFLYVTIQPFDIESSSSSPSSSLSKELSLEKEGSESVSQSLKD--DDDLEIASFT 196
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: K7N4R9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.950e-76 Identity = 157/284 (55.28%), Postives = 201/284 (70.77%), Query Frame = -3 Query: 1 SGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAIGEMQ-----------------LFSEGSDD-------WVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 780 S +YGL ++ +A+E + +H G+ C++ SF N++ EL++++EML EELREAA +E S+YS++AEHGSS+NKVHAPARRLSRFY HAC+ + A+AA++A+SG VLVSKACGNDVPRLTFW SN I+LRA VS + + L E D+ W DP+TFL+AL+K EAWIFSRIVESVWWQTLTPYMQSAAAK+S S+K RRY +GD +QGSFS++LWK+AFKDACER+CP+RA GHECGCL V+ Sbjct: 437 SAENYGLFISSQTHNQAEEINTMNDVHVGTA---CHEDVNVNGSFHNNETELKAEVEMLREELREAAALEVSMYSVIAEHGSSSNKVHAPARRLSRFYFHACRVGSPATMATAAQSAVSGFVLVSKACGNDVPRLTFWFSNLILLRAIVSKEVENIHFGDGPSINSESDGTGNTLHKEEKDNTEKHFHRWEDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKNSSSRKAYERRYRVGDQDQGSFSIDLWKRAFKDACERICPLRAGGHECGCLLVI 717 HSP 2 Score: 190.66 bits (483), Expect = 5.600e-47 Identity = 123/202 (60.89%), Postives = 152/202 (75.25%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLG+R+K++K S QV+YI++V+EI PW P QSL + Q++LLQWENGD+NSGS S+ NGKIEF ESFRL V + E+S+K +R+ FQKNCLEFYLY DK K QLLGSA +NLAD+GII+ET ++S N KKSSR QP LY+ IQPFD SSSSS SL KE+SLEK+GSESVS S+ +D+ EIASFT Sbjct: 1 MVLGIRSKSKKSVSIQVHYIIHVQEIKPWPPSQSLRSVQTVLLQWENGDQNSGSLPSTAGNGKIEFNESFRLSVLMCREASKKGKHRETFQKNCLEFYLY----DKTVKSQLLGSATINLADFGIIKETKALSIQFNCKKSSRISSQPFLYVNIQPFDIESSSSSPSSSLSKELSLEKEGSESVSQSLK--DDDNLEIASFT 196
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: A0A0B2RAK2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_030017 PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.945e-76 Identity = 154/266 (57.89%), Postives = 200/266 (75.19%), Query Frame = -3 Query: 1 SGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAI------GEMQLFSEGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 780 S +YG+ + +A+E + +H G++ C++ SF N++ EL++++EML+EELREAA +E S+YS++AEHGSS+NKVHAPARRLSRFY HAC+ + D ASAA++A+SG VLVSKACGNDVPRLTFW SN I+LRA VS + + + W DP+TFL+AL+K EAWIFSRIVESVWWQTLTPYMQSAAAKSS S+K +RY +GD +QG+FS++LWK+AFKDACER+CP+RA GHECGCL V+ Sbjct: 574 SAENYGMFSSNQTHIQAEEINTTNDVHVGTS---CHEDVNVNGSFLNNETELKAEVEMLQEELREAAALEVSMYSVIAEHGSSSNKVHAPARRLSRFYFHACRVGSPDTMASAAQSAVSGFVLVSKACGNDVPRLTFWFSNLILLRAIVSKEVERDGNGNTLHKEEKPFHSWEDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKSSSSRKAYEKRYRVGDQDQGNFSIDLWKRAFKDACERICPLRAGGHECGCLPVI 836 HSP 2 Score: 194.126 bits (492), Expect = 1.013e-47 Identity = 127/202 (62.87%), Postives = 152/202 (75.25%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGLR+K+RK S QV+YI++V EI PW P QSL + QS+ LQWENGDKNSGS S+ NGKIEF ESFRL V + E+S+K + + FQKNCLEFYLY DK K QLLGSA+VNLAD+GII+ET ++S N KKS RN QP LY+TIQPFD SSSSS SL KE+SLEK+GSESVS S+ +D++ EIASFT Sbjct: 1 MVLGLRSKSRKRVSIQVHYIIHVLEIKPWPPSQSLRSVQSVFLQWENGDKNSGSLPSTAGNGKIEFNESFRLSVLMCREASKKGKHPESFQKNCLEFYLY----DKTVKSQLLGSAIVNLADFGIIKETKALSIVFNCKKSFRNSSQPFLYVTIQPFDIESSSSSPSSSLSKELSLEKEGSESVSQSLK--DDDDLEIASFT 196
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Match: K7LK51_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.945e-76 Identity = 154/266 (57.89%), Postives = 200/266 (75.19%), Query Frame = -3 Query: 1 SGNSYGLLKKTEFAKKAKENDIPEKIHCGSTSDTCNKSKENTKSFSNSKXXXXXXXXXXXXXXXXXXXXXASLYSIVAEHGSSTNKVHAPARRLSRFYLHACKANTQDKRASAARAAISGLVLVSKACGNDVPRLTFWLSNSIVLRATVSHAI------GEMQLFSEGSDDWVDPQTFLLALQKFEAWIFSRIVESVWWQTLTPYMQXXXXXXXXXXXXXSRRYGLGDLEQGSFSVELWKKAFKDACERLCPIRACGHECGCLAVL 780 S +YG+ + +A+E + +H G++ C++ SF N++ EL++++EML+EELREAA +E S+YS++AEHGSS+NKVHAPARRLSRFY HAC+ + D ASAA++A+SG VLVSKACGNDVPRLTFW SN I+LRA VS + + + W DP+TFL+AL+K EAWIFSRIVESVWWQTLTPYMQSAAAKSS S+K +RY +GD +QG+FS++LWK+AFKDACER+CP+RA GHECGCL V+ Sbjct: 574 SAENYGMFSSNQTHIQAEEINTTNDVHVGTS---CHEDVNVNGSFLNNETELKAEVEMLQEELREAAALEVSMYSVIAEHGSSSNKVHAPARRLSRFYFHACRVGSPDTMASAAQSAVSGFVLVSKACGNDVPRLTFWFSNLILLRAIVSKEVERDGNGNTLHKEEKPFHSWEDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKSSSSRKAYEKRYRVGDQDQGNFSIDLWKRAFKDACERICPLRAGGHECGCLPVI 836 HSP 2 Score: 194.126 bits (492), Expect = 1.013e-47 Identity = 127/202 (62.87%), Postives = 152/202 (75.25%), Query Frame = -3 Query: 1621 MVLGLRTKNRKGNSYQVYYIVYVKEINPWTXXXXXXXXXXXXXQWENGDKNSGSSVSSFRNGKIEFGESFRLQVTLSLESSRKSTNRDGFQKNCLEFYLYEPRKDKVAKGQLLGSAVVNLADYGIIRETISISTPINLKKSSRNIEQPVLYLTIQPFDXXXXXXXXXXSLPKEVSLEKDGSESVSGSINEGNDEETEIASFT 2226 MVLGLR+K+RK S QV+YI++V EI PW P QSL + QS+ LQWENGDKNSGS S+ NGKIEF ESFRL V + E+S+K + + FQKNCLEFYLY DK K QLLGSA+VNLAD+GII+ET ++S N KKS RN QP LY+TIQPFD SSSSS SL KE+SLEK+GSESVS S+ +D++ EIASFT Sbjct: 1 MVLGLRSKSRKRVSIQVHYIIHVLEIKPWPPSQSLRSVQSVFLQWENGDKNSGSLPSTAGNGKIEFNESFRLSVLMCREASKKGKHPESFQKNCLEFYLY----DKTVKSQLLGSAIVNLADFGIIKETKALSIVFNCKKSFRNSSQPFLYVTIQPFDIESSSSSPSSSLSKELSLEKEGSESVSQSLK--DDDDLEIASFT 196 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094272 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094272 ID=g.barbadense_cottongen_reftransV1_0094272; Name=g.barbadense_cottongen_reftransV1_0094272; organism=Gossypium barbadense; type=contig; length=2630bpback to top |