g.barbadense_cottongen_reftransV1_0094251, g.barbadense_cottongen_reftransV1_0094251 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094251
Unique Nameg.barbadense_cottongen_reftransV1_0094251
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2004
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC6_ARATH (Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thaliana GN=BPC6 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 6.640e-129
Identity = 230/354 (64.97%), Postives = 277/354 (78.25%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASG---NISSCPPGFHISRGVKHMQHPQQNVHH----LPHISEVPYNSREMHASDVLPVTP---GTSEAAKSRQGKRA--KEAKVIASNXXXXXXXXXXKQENEDS-DKLMSGKS-HEWKGGQDVGGAGDDLNKQ-LVTTKSDWKGKDL-GLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEG-YDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KA      QGQWLM HQPSMKQ+M+I+AERDAAIQERNLA+SEKKAA+AERDMAFLQRD AIAERNNAI ERD+A+  LQYRENS+ +    N+S+CPPG  ISRGVKH+ HP  + HH    +P ++E  Y +REM  +D LP +P    T E+AK ++GKR   K     A+NK+  K  +KVK+E+ED  +K+M  K+ H++          +D +K  L+ +KSDWK +++ GLNQVV+D++TM PPVCSCTGVLRQCYKWGNGGWQSSCCTT+LSMYPLPA+PNKRHAR+GGRKMSGSAFNKLL+RLAAEG +DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKA----AVQGQWLMQHQPSMKQVMSIIAERDAAIQERNLAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTALQYRENSMVTAPAANMSACPPGCQISRGVKHLHHPHMHHHHQQHHIPQLTENAYETREMEPNDGLPTSPPAGSTLESAKPKRGKRVNPKATTQTAANKRGPKNQRKVKKESEDDLNKIMFVKTTHDY--------TDEDSSKHILIGSKSDWKSQEMVGLNQVVYDETTMPPPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPLPALPNKRHARVGGRKMSGSAFNKLLSRLAAEGHHDLSNPVDLKDHWAKHGTNRYITIK 342
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBRD_ORYSJ (Barley B recombinant-like protein D OS=Oryza sativa subsp. japonica GN=Os06g0130600 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.073e-93
Identity = 180/349 (51.58%), Postives = 228/349 (65.33%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMK-------QIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLP---HISEVPYN-SREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVG--GAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MD+ GHRENGR + DQY+    QW+M Q            ++A+M +RD AI+ER+ AL+EKKAAIAERDMAF QRDAA+AERN A+ ERDNA+A L+    +  + N  +  P   +S G K++ H  Q  H       +++ PY+ +REMH S+  P++     A K+   KR K+    AS  K      +  ++           S +WK   +VG  G GDD +      K++WK ++LGLNQV FDDSTM  P CSCTG LRQCYKWGNGGWQSSCCT ++SMYPLP +PNKRHAR+GGRKMSG AF KLL+RLAAEG+DLS PVDLK HWAKHGTNRYITI+
Sbjct:    1 MDNLGHRENGRQRPDQYKGLHTQWMMPQTQRHLKDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELARTNGLNMNNGNGFPQGSLS-GSKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPISTAPGSAGKA---KRPKKNSSQASPLKRPSGVLRKTKK----------PSGDWK---NVGMSGCGDD-SAHASVMKNEWKDQNLGLNQVAFDDSTMPAPACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPVMPNKRHARMGGRKMSGGAFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR 331
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC4_ARATH (Protein BASIC PENTACYSTEINE4 OS=Arabidopsis thaliana GN=BPC4 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.248e-78
Identity = 157/352 (44.60%), Postives = 206/352 (58.52%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM---HQPSM--------KQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQ-GKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVT----TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            M++GG  +N R K D ++ AQ  W M   HQ           K+IM+I+AERDAA+ ERN A+S KK A+A RD A  QRD A++ER+ A+ ERDNA A LQ+ ENSL           F +S G K +              +  +   E H  +V P++    E   ++   KR KE K                                 +G   V   G+DLN+++      +++DW  +D+GLN V FD++TM  P+CSCTG  RQCYKWGNGGWQSSCCTT+LS YPLP +PNKRH+R+GGRKMSG+ F++LL+RL+AEGYDLS PVDLK +WA+HGTNRYITIK
Sbjct:    1 MENGGQYDNARFKPDYFKGAQSMWNMIPQHQIKEQHNALVMNKKIMSILAERDAAVHERNQAVSAKKEAVAARDEALQQRDKALSERDKALIERDNAYAALQHHENSL----------NFALSGG-KCVD------------GDDCFGIGEPHKLEVFPLSTIPPEVTNTKVVNKRKKENK---------------------------------QGLSKVKKVGEDLNRRVPAPGKKSRTDWDSQDVGLNLVTFDETTMPVPMCSCTGSTRQCYKWGNGGWQSSCCTTTLSQYPLPQMPNKRHSRMGGRKMSGNVFSRLLSRLSAEGYDLSCPVDLKDYWARHGTNRYITIK 296
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC5_ARATH (Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thaliana GN=BPC5 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.674e-73
Identity = 151/347 (43.52%), Postives = 203/347 (58.50%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSM-------KQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVT----TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            M+ GG  ENGR K D Y+  Q   +M +          K+I++I+AERDAA++ERN A++  K A+A RD A  QRD A++ER+NAI E ++A+  L+YREN+L    I SC       RG       +++  HLP+ S               P++    EAA +R  KR KE+K                           GK             G+DLN+ + +    ++ DW   D+    V FD+ TM  P+C+CTG  RQCYKWGNGGWQSSCCTT+LS YPLP +PNKRH+R+GGRKMSGS F++LL+RLA EG++LS+PVDLK++WA+HGTNRYITIK
Sbjct:    1 MESGGQYENGRYKPDYYKGTQSVNVMPKKEQHNALVMNKKIISILAERDAAVKERNEAVAATKEALASRDEALEQRDKALSERDNAIMETESALNALRYRENNL--NYILSC-----AKRGGSQRFITEES--HLPNPS---------------PISTIPPEAANTRPTKRKKESK--------------------------QGKK-----------MGEDLNRPVASPGKKSRKDWDSNDV---LVTFDEMTMPVPMCTCTGTARQCYKWGNGGWQSSCCTTTLSEYPLPQMPNKRHSRVGGRKMSGSVFSRLLSRLAGEGHELSSPVDLKNYWARHGTNRYITIK 283
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC7_ARATH (Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana GN=BPC7 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.605e-43
Identity = 71/115 (61.74%), Postives = 87/115 (75.65%), Query Frame = -3 
Query:  566 TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 910
            TK + K  D+ ++   FD S + PPVCSCTGV R CYKWG GGWQSSCCT S+S YPLP    +  AR+ GRKMS  A+ KLL RLA EGYDLS+P+DLK+HWA+HGTN+++TIK
Sbjct:  112 TKREKKNLDINIDISSFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPGARLAGRKMSNGAYVKLLARLADEGYDLSHPLDLKNHWARHGTNKFVTIK 226
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC3_ARATH (Protein BASIC PENTACYSTEINE3 OS=Arabidopsis thaliana GN=BPC3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.211e-39
Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  ++ +N V  D   +  PVCSCTG+ +QCY+WG GGWQS+CCTT++SMYPLP    +R ARI GRKMS  AF K+L +L+++G+D SNP+DLK HWAKHGTN+++TI+
Sbjct:  160 KCIEMVINGVSMDIGGLPVPVCSCTGMPQQCYRWGCGGWQSACCTTNVSMYPLPVNTKRRGARIAGRKMSQGAFRKVLEKLSSDGFDFSNPIDLKSHWAKHGTNKFVTIR 269
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBR_HORVU (Protein Barley B recombinant OS=Hordeum vulgare GN=BBR PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.137e-39
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = -3 
Query:  566 TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 910
            ++   K  ++ +N + FD S +  PVCSCTG  +QCY+WG GGWQS+CCTTS+S YPLP    +R ARI GRKMS  AF K+L +LA EGY+L+NP+DLK  WAKHGTN+++TI+
Sbjct:  236 SRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 350
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC2_ARATH (Protein BASIC PENTACYSTEINE2 OS=Arabidopsis thaliana GN=BPC2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.271e-38
Identity = 61/110 (55.45%), Postives = 84/110 (76.36%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  DL +N V  D S +  P+C+CTG  +QCY+WG GGWQS+CCTT++SM+PLP    +R ARI GRKMS  AF K+L +LA++G++  NP+DLK HWA+HGTN+++TI+
Sbjct:  170 KSVDLVINGVSMDISGLPVPICTCTGAPQQCYRWGCGGWQSACCTTNISMHPLPMSTKRRGARISGRKMSQGAFKKVLEKLASDGFNFGNPIDLKSHWARHGTNKFVTIR 279
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC1_ARATH (Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thaliana GN=BPC1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.252e-38
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  DL +N V  D S +  PVC+CTG  +QCY+WG GGWQS+CCTT++S+YPLP    +R ARI GRKMS  AF K+L +L+ EGY   N +DLK HWA+HGTN+++TI+
Sbjct:  174 KSVDLVINGVSMDISGLPVPVCTCTGTPQQCYRWGCGGWQSACCTTNISVYPLPMSTKRRGARISGRKMSQGAFKKVLEKLSTEGYSFGNAIDLKSHWARHGTNKFVTIR 283
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBRB_ORYSJ (Barley B recombinant-like protein B OS=Oryza sativa subsp. japonica GN=Os10g0115200 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.548e-37
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = -3 
Query:  566 KDLGL--NQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 889
            K++G+  N +  D S +  P+CSCTG  +QCY+WG GGWQS+CCTT++S YPLP    +R ARI GRKMS  AF K+L +LA EGY+L+NP+DLK  WAKHGTN+++TI+
Sbjct:  232 KNIGMVINGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 341
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: V7ARX6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G015000g PE=4 SV=1)

HSP 1 Score: 512.301 bits (1318), Expect = 4.203e-174
Identity = 261/337 (77.45%), Postives = 295/337 (87.54%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KADQ+++AQGQWLM HQPSMKQIMAIMAERDAAIQERNLA+SEKKAA AERDMAFLQRDAAIAERNNAI ERDNA A LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  YN+REMH +DVLP  P TSEA KSR+ KR KE K  + NKK TK  KKVK+E+ED +K+M GK+HEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVL+QCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKADQFKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAFATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDPSYNTREMHTTDVLPAAPITSEAGKSRRAKRPKEPKSTSPNKKTTKAAKKVKKESEDLNKVMFGKAHEWKNGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLKQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A0B2SGQ8_GLYSO (Protein BASIC PENTACYSTEINE6 OS=Glycine soja GN=glysoja_023129 PE=4 SV=1)

HSP 1 Score: 509.605 bits (1311), Expect = 4.690e-173
Identity = 261/338 (77.22%), Postives = 294/338 (86.98%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQGQWLM HQPSMKQIMAIMAERDAAIQERNLA+SEKKAA AERDMAF+QRDAAIAERNNAI ERDNAIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  Y++REMH +D LP  P  SEA K R+ KR KE K  + NKK +KP KKVK+E+ED +K+M GKSHEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +DDSTM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFMQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDASYSTREMHTTDALPAAPIPSEAGKPRRAKRPKEPKSASPNKKTSKPAKKVKKESEDLNKVMFGKSHEWKSGQEMVNGGDDLNKQLTVSKADWKGQDLGLNQVAYDDSTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 338
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: I1JT52_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 508.064 bits (1307), Expect = 1.669e-172
Identity = 260/338 (76.92%), Postives = 294/338 (86.98%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQGQWLM HQPSMKQIMAIMAERDAAIQERNLA+SEKKAA AERDMAF+QRDAAIAERNNAI ERDNAIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  Y++REMH +D LP  P  SEA K R+ KR KE K  + NKK +KP KKVK+E+ED +K+M GKSHEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFMQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDASYSTREMHTTDALPAAPIPSEAGKPRRAKRPKEPKSASPNKKTSKPAKKVKKESEDLNKVMFGKSHEWKSGQEMVNGGDDLNKQLTVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 338
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: C6T8J3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 505.368 bits (1300), Expect = 2.207e-171
Identity = 259/338 (76.63%), Postives = 293/338 (86.69%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQ QWLM HQPSMKQIMAIMAERDAAIQERNLA+SEKKAA AERDMAF+QRDAAIAERNNAI ERDNAIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  Y++REMH +D LP  P  SEA K R+ KR KE K  + NKK +KP KKVK+E+ED +K+M GKSHEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQRQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFMQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDASYSTREMHTTDALPAAPIPSEAGKPRRAKRPKEPKSASPNKKTSKPAKKVKKESEDLNKVMFGKSHEWKSGQEMVNGGDDLNKQLTVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 338
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A0B2PNG6_GLYSO (Protein BASIC PENTACYSTEINE6 OS=Glycine soja GN=glysoja_034292 PE=4 SV=1)

HSP 1 Score: 494.582 bits (1272), Expect = 3.005e-167
Identity = 254/338 (75.15%), Postives = 291/338 (86.09%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQGQWLM HQPSMKQIMA++AERDAAIQERNLA+SEKKAA AERDMA++QRDAAIAERNNA+ ERDNAIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  YN+REMH ++VLP  P  SE  KSR+ KR KE K    NKK +KP KKVK+E+ED +  M GK+HEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAE +DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAMIAERDAAIQERNLAISEKKAAYAERDMAYMQRDAAIAERNNAMLERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHVHHPQQQVHHIPNMGDASYNTREMHTTEVLPAAPIPSETGKSRRAKRPKEPKSAPPNKKTSKPSKKVKKESEDLNN-MFGKAHEWKSGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAESHDLSNPVDLKDHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: I1K7L4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 494.582 bits (1272), Expect = 3.005e-167
Identity = 254/338 (75.15%), Postives = 291/338 (86.09%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQGQWLM HQPSMKQIMA++AERDAAIQERNLA+SEKKAA AERDMA++QRDAAIAERNNA+ ERDNAIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  YN+REMH ++VLP  P  SE  KSR+ KR KE K    NKK +KP KKVK+E+ED +  M GK+HEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAE +DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAMIAERDAAIQERNLAISEKKAAYAERDMAYMQRDAAIAERNNAMLERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHVHHPQQQVHHIPNMGDASYNTREMHTTEVLPAAPIPSETGKSRRAKRPKEPKSAPPNKKTSKPSKKVKKESEDLNN-MFGKAHEWKSGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAESHDLSNPVDLKDHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: W9RR46_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019400 PE=4 SV=1)

HSP 1 Score: 491.115 bits (1263), Expect = 7.279e-166
Identity = 259/337 (76.85%), Postives = 301/337 (89.32%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR K DQY+TAQGQW+M HQPSMKQIMA+MAERDAAIQERNLAL+EKKAA+AERDMAFLQRDAAIAERNNAI ERDNA+A LQYRENSL++GN+SSCPPG  ISRGVKHM HPQ + HH+ H++E  Y +REM+ +D LP++P  S+AAKSR+GKR KEAK ++ NKKA+KPP+K+K+E+ED +K+  GK+ EWK GQ + G  DD NKQLV +KSDWKG+DLGLNQV +D+STM  PVC+CTGV+RQCYKWGNGGWQSSCCTT++SMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKGDQYKTAQGQWMMQHQPSMKQIMALMAERDAAIQERNLALAEKKAALAERDMAFLQRDAAIAERNNAIMERDNAVATLQYRENSLSNGNMSSCPPGCQISRGVKHMHHPQTHAHHMQHVNEGSYATREMNTTDSLPISPDASDAAKSRRGKRMKEAKPVSPNKKASKPPRKLKRESEDLNKMAFGKAQEWKSGQGMVGGSDDFNKQLVVSKSDWKGQDLGLNQVSYDESTMPAPVCTCTGVIRQCYKWGNGGWQSSCCTTTMSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: B2Z458_VITVI (GAGA-binding transcriptional activator BBR/BPC6-like OS=Vitis vinifera GN=VIT_18s0001g13730 PE=2 SV=1)

HSP 1 Score: 490.73 bits (1262), Expect = 1.148e-165
Identity = 264/337 (78.34%), Postives = 292/337 (86.65%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MD+GGHRENGR KAD Y+    QWLM HQP+MKQIMAIMAERD A+QERNLALSEKKAA+AERDMAFLQRD AIAERNNAI ERDNAIA LQYRENSL  GN+S CPPG  ISRGVKHM HPQ ++HH  H+SE  Y++REMH  D LPV+P  SEAAKSR+ KR KEAK ++SNKKA+KP KK K+E ED +K++ GKS EWKGGQD+   GDDLNKQLV +KSDWKG+DLGLNQV FD+STM  PVCSCTGVLRQCYKWGNGGWQSSCCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLS PVDLK HWAKHGTNRYITIK
Sbjct:    1 MDEGGHRENGRHKADPYKAVHSQWLMQHQPTMKQIMAIMAERDTAVQERNLALSEKKAAVAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLNGGNMSPCPPGCQISRGVKHMHHPQPHLHHPTHLSEAAYSAREMHIGDALPVSPVASEAAKSRRAKRPKEAKPMSSNKKASKPLKKPKREGEDLNKIVFGKSREWKGGQDMSSGGDDLNKQLVVSKSDWKGQDLGLNQVTFDESTMPAPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSIPVDLKDHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: C6T818_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 488.034 bits (1255), Expect = 1.102e-164
Identity = 253/338 (74.85%), Postives = 290/338 (85.80%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKA-DQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR KA DQY++AQGQWLM HQPSMKQIMA++AERDAAIQERNLA+SEKKAA AERDMA++QRDAAIAERNNA+ ERD AIA LQYRE SL+SG++ SCPPG  ISRGVKH+ HPQQ VHH+P++ +  YN+REMH ++VLP  P  SE  KSR+ KR KE K    NKK +KP KKVK+E+ED +  M GK+HEWK GQ++   GDDLNKQL  +K+DWKG+DLGLNQV +D+STM  PVCSCTGVLRQCYKWGNGGWQS+CCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAE +DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDAGHRENGRHKAADQYKSAQGQWLMQHQPSMKQIMAMIAERDAAIQERNLAISEKKAAYAERDMAYMQRDAAIAERNNAMLERD-AIATLQYRETSLSSGSMPSCPPGCQISRGVKHVHHPQQQVHHIPNMGDASYNTREMHTTEVLPAAPIPSETGKSRRAKRPKEPKSAPPNKKTSKPSKKVKKESEDLNN-MFGKAHEWKSGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAESHDLSNPVDLKDHWAKHGTNRYITIK 336
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: M5XE43_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008316mg PE=4 SV=1)

HSP 1 Score: 480.715 bits (1236), Expect = 9.659e-162
Identity = 258/337 (76.56%), Postives = 292/337 (86.65%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGR+KA+QY+ AQGQWLM HQPSMKQIMAIM ERDAAIQERNLA SEKKAA+ ERDMAFLQRDAAIAERN AI ERDNAIANLQYRENSL +GN+SSCPPG  ISRGVKHM HPQQ+VHH PH++E  Y +R+MH SD +P+ P  S   KSRQ KR +E K +A NKK +K P+KVK+E+ED +K+   K HEWKG QD+GG GDD+NK LV +KSDWK +DLGLNQV +D+STM  PVCSCTG+LRQCYKWGNGGWQSSCCTT++SMYPLPAVPNKRHAR+GGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK +WAKHGTNRYITIK
Sbjct:    1 MDDSGHRENGRIKAEQYKAAQGQWLMQHQPSMKQIMAIMGERDAAIQERNLAFSEKKAALQERDMAFLQRDAAIAERNTAIMERDNAIANLQYRENSLNNGNVSSCPPGCQISRGVKHMHHPQQHVHHPPHMNEASYGTRDMHTSDSVPMPPDASLPTKSRQPKRPREPKTMAPNKKTSKSPRKVKRESEDLNKMTFDKLHEWKGSQDMGGGGDDVNKHLVVSKSDWKCQDLGLNQVAYDESTMPAPVCSCTGILRQCYKWGNGGWQSSCCTTTMSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDNWAKHGTNRYITIK 337
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 12
Match NameE-valueIdentityDescription
BPC6_ARATH6.640e-12964.97Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thalia... [more]
BBRD_ORYSJ3.073e-9351.58Barley B recombinant-like protein D OS=Oryza sativ... [more]
BPC4_ARATH1.248e-7844.60Protein BASIC PENTACYSTEINE4 OS=Arabidopsis thalia... [more]
BPC5_ARATH1.674e-7343.52Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thalia... [more]
BPC7_ARATH3.605e-4361.74Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thalia... [more]
BPC3_ARATH3.211e-3957.27Protein BASIC PENTACYSTEINE3 OS=Arabidopsis thalia... [more]
BBR_HORVU6.137e-3956.52Protein Barley B recombinant OS=Hordeum vulgare GN... [more]
BPC2_ARATH2.271e-3855.45Protein BASIC PENTACYSTEINE2 OS=Arabidopsis thalia... [more]
BPC1_ARATH5.252e-3856.36Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thalia... [more]
BBRB_ORYSJ1.548e-3757.27Barley B recombinant-like protein B OS=Oryza sativ... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7ARX6_PHAVU4.203e-17477.45Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A0B2SGQ8_GLYSO4.690e-17377.22Protein BASIC PENTACYSTEINE6 OS=Glycine soja GN=gl... [more]
I1JT52_SOYBN1.669e-17276.92Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T8J3_SOYBN2.207e-17176.63Putative uncharacterized protein OS=Glycine max PE... [more]
A0A0B2PNG6_GLYSO3.005e-16775.15Protein BASIC PENTACYSTEINE6 OS=Glycine soja GN=gl... [more]
I1K7L4_SOYBN3.005e-16775.15Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
W9RR46_9ROSA7.279e-16676.85Uncharacterized protein OS=Morus notabilis GN=L484... [more]
B2Z458_VITVI1.148e-16578.34GAGA-binding transcriptional activator BBR/BPC6-li... [more]
C6T818_SOYBN1.102e-16474.85Putative uncharacterized protein OS=Glycine max PE... [more]
M5XE43_PRUPE9.659e-16276.56Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..88
NoneNo IPR availablePANTHERPTHR31421:SF2PROTEIN BASIC PENTACYSTEINE6coord: 6..194
coord: 215..340
IPR010409GAGA-binding transcriptional activatorSMARTSM01226GAGA_bind_2coord: 5..340
e-value: 4.2E-169
score: 577.8
IPR010409GAGA-binding transcriptional activatorPFAMPF06217GAGA_bindcoord: 5..340
e-value: 8.4E-102
score: 341.3
IPR010409GAGA-binding transcriptional activatorPANTHERPTHR31421FAMILY NOT NAMEDcoord: 6..194
coord: 215..340

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094251 ID=g.barbadense_cottongen_reftransV1_0094251; Name=g.barbadense_cottongen_reftransV1_0094251; organism=Gossypium barbadense; type=contig; length=2004bp
GATCCATTTAGTAATGGGACTAATTTGATACAGTCCTTACAATACAGTTT
GATACAGTCCTTACAATACAGGGACTTCCCAGGTACTTAATTCTTTATTT
ATATGGTTACCTAAAACCTCTGGTTATCAAATTGTCATCCTACCTATTAG
AGAAGCAAATTTGGTGGATTAAGCTAATAAACTGAAACTTGATTCAAGTA
CAACAAGACGTTTGAGGTACAGTACTTTTACAATTAAGTAGAGAGCTACA
GTCAACATAGTGCCAAGTTGACAACCCCATCATTTTTCCAAGCTTGGATG
TGCCAATGGTAATGGATACTTTCTCCTCTCTTCAAATACCAGGCTTGCTA
ATGGAGGATCGAGGCATATCGGAGGGGGCGTTTCCAGGGAAACCCAAAAT
TAAGTTGGCATTACCCACCTACTACTATTCCTTACTACAGTTATTTCCGG
ATCATTTATTTTTCCTACACTGCTACAATGACTAACGAAAGAAACATGAG
CCATGGCTGACTCTTCTCTACTTCTCCATACCATCCCATTTGCATTTGGT
ATCTTGAGCAACCTACTTGATGGTGATGTAGCGGTTTGTCCCATGCTTGG
CCCAGTGGTGCTTAAGATCAACAGGGTTGGACAAATCATAACCTTCTGCT
GCAAGCCGAGTAAGCAGCTTGTTGAAAGCGCTTCCACTCATCTTTCTGCC
TCCGATTCGGGCATGTCTTTTGTTGGGAACTGCTGGCAAAGGATACATTG
ACAAGGAGGTTGTGCAACATGAAGATTGCCATCCCCCGTTTCCCCATTTA
TAGCACTGTCTTAGGACTCCGGTGCAGGAACAAACAGGCGGTGCCATAGT
CGAGTCATCAAATACAACTTGATTCAACCCCAGATCCTTACCTTTCCAAT
CAGACTTCGTTGTCACTAGCTGTTTGTTGAGATCATCACCTGCACCACCC
ACATCTTGTCCACCCTTCCACTCATGTGACTTGCCAGACATAAGCTTATC
CGAGTCCTCGTTCTCTTGTTTTACCTTTTTTGGAGGCTTTGTAGCCTTCT
TGTTAGATGCAATTACCTTGGCCTCTTTTGCTCGTTTACCCTGTCTTGAC
TTTGCAGCTTCAGAGGTACCTGGCGTCACTGGTAGGACATCACTTGCATG
CATTTCCCTTGAGTTATAAGGAACTTCACTAATGTGGGGCAGATGGTGAA
CGTTCTGCTGTGGATGTTGCATGTGCTTCACTCCACGTGAGATATGGAAC
CCTGGAGGACAAGAGGATATATTGCCAGATGCCAAGGAGTTCTCTCGATA
CTGCAGATTTGCTATGGCATTATCACGTTCCGCTATAGCATTATTTCGCT
CAGCAATCGCTGCATCTCGCTGCAAGAATGCCATATCTCTCTCAGCAATA
GCTGCCTTCTTCTCAGAAAGTGCTAAATTCCTTTCTTGAATAGCTGCGTC
TCGTTCAGCCATAATGGCCATTATCTGCTTCATTGATGGCTGATGCATCA
GCCACTGGCCCTGAGCTGTTCTATACTGATCTGCTTTAAGTCTTCCATTT
TCACGATGCCCACCATCATCCATCGAAGACTCCAGGAAATTGTTGAGGTC
GACAAATACAGTCTCAGAACTCCGCTGTGAGGGTTGTATTAGTCAAGCAA
GCATCGCATCGCATCACTTTGGGGCAGACAATCCTTACTATCGAAAGGCG
TATGAGGAGCAAAACCACATCCTTTTAGCAGCTGATCTTCCCTGAATTAC
AACAGTGGAAGAATTAAAGAGGAAATAGATGGGAAATCAAGACATGAATT
TTGATAAGTTGAAGAAATATGTGGAAAGGAAGAGTGGAAAGAAAGGAAAA
ACAGAGGAATTTTTCCTTACTTTTTGTGTCCTGAGACCTTGATTTTCCAC
TGTAGTGTCGTCACGTTCCGCGGGTGGGCTATAAACCTAAGCACTCAATC
ACACAATCCATCGCCTAAGGCTAATCCATTTTTGTTTTAATAAAACTTGG
AATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR010409GAGA-bd_tscrpt_act